Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:42:51 (9106): wrapper (7.7.26015): starting
01:42:51 (9106): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 01:42:51] Arguments: --nthreads 12
[2026-01-09 01:42:51] Threads: 12
[2026-01-09 01:42:51] Checking for CVMFS
[2026-01-09 01:42:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 01:42:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 01:42:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 01:42:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 01:42:51] 2.11.2.0 3081 350649 97668 154934 2 56 10604368 20275200 1 130560 1 148485191 99.955 20165086 16098 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 01:42:51] CVMFS is ok
[2026-01-09 01:42:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 01:42:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 01:42:51] Further information can be found at the LHC@home message board.
[2026-01-09 01:42:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 01:42:51] Checking for apptainer binary...
[2026-01-09 01:42:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 01:42:51] Running /usr/bin/apptainer --version
[2026-01-09 01:42:52] apptainer version 1.3.2-1.el7
[2026-01-09 01:42:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 01:42:53] c-205-29.aglt2.org
[2026-01-09 01:42:53] apptainer works
[2026-01-09 01:42:53] Set ATHENA_PROC_NUMBER=12
[2026-01-09 01:42:53] Set ATHENA_CORE_NUMBER=12
[2026-01-09 01:42:53] Starting ATLAS job with PandaID=6963167983
[2026-01-09 01:42:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 03:28:41]  *** The last 200 lines of the pilot log: ***
[2026-01-09 03:28:41] 2026-01-09 08:28:04,635 | INFO     | total number of processed events: 400 (read)
[2026-01-09 03:28:41] 2026-01-09 08:28:04,636 | INFO     | executing command: lscpu
[2026-01-09 03:28:41] 2026-01-09 08:28:04,654 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 03:28:41] 2026-01-09 08:28:05,865 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-01-09 03:28:41] 2026-01-09 08:28:05,873 | INFO     | time since job start (6297s) is within the limit (349056.0s)
[2026-01-09 03:28:41] 2026-01-09 08:28:06,925 | INFO     | monitor loop #466: job 0:6963167983 is in state 'finished'
[2026-01-09 03:28:41] 2026-01-09 08:28:06,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 03:28:41] 2026-01-09 08:28:06,991 | INFO     | PID=12840 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 03:28:41] 2026-01-09 08:28:07,991 | INFO     | time since job start (6299s) is within the limit (349056.0s)
[2026-01-09 03:28:41] 2026-01-09 08:28:08,453 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 03:28:41] 2026-01-09 08:28:08,455 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2061.8333333333335
[2026-01-09 03:28:41] 2026-01-09 08:28:08,457 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963167983/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 03:28:41] 2026-01-09 08:28:08,457 | INFO     | extracted standard info from prmon json
[2026-01-09 03:28:41] 2026-01-09 08:28:08,457 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 03:28:41] 2026-01-09 08:28:08,457 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 03:28:41] 2026-01-09 08:28:08,458 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 03:28:41] 2026-01-09 08:28:08,458 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 03:28:41] 2026-01-09 08:28:08,459 | INFO     | fitting pss+swap vs Time
[2026-01-09 03:28:41] 2026-01-09 08:28:08,460 | INFO     | sum of square deviations: 338804492.0
[2026-01-09 03:28:41] 2026-01-09 08:28:08,460 | INFO     | sum of deviations: 7992296189.000004
[2026-01-09 03:28:41] 2026-01-09 08:28:08,460 | INFO     | mean x: 1767944128.0
[2026-01-09 03:28:41] 2026-01-09 08:28:08,460 | INFO     | mean y: 2664960.854368932
[2026-01-09 03:28:41] 2026-01-09 08:28:08,460 | INFO     | intersect: -41702605926.106995
[2026-01-09 03:28:41] 2026-01-09 08:28:08,461 | INFO     | chi2: 1.51986977415104
[2026-01-09 03:28:41] 2026-01-09 08:28:08,461 | INFO     | sum of square deviations: 291817564.5
[2026-01-09 03:28:41] 2026-01-09 08:28:08,461 | INFO     | sum of deviations: 7628925380.5
[2026-01-09 03:28:41] 2026-01-09 08:28:08,461 | INFO     | mean x: 1767943975.5
[2026-01-09 03:28:41] 2026-01-09 08:28:08,462 | INFO     | mean y: 2663780.6224489794
[2026-01-09 03:28:41] 2026-01-09 08:28:08,462 | INFO     | intersect: -46216324747.718925
[2026-01-09 03:28:41] 2026-01-09 08:28:08,462 | INFO     | chi2: 1.5232859702030455
[2026-01-09 03:28:41] 2026-01-09 08:28:08,462 | INFO     | current chi2=1.5232859702030455 (change=-0.2247689973250229 %)
[2026-01-09 03:28:41] 2026-01-09 08:28:08,462 | INFO     | right removable region: 97
[2026-01-09 03:28:41] 2026-01-09 08:28:08,462 | INFO     | sum of square deviations: 291817564.5
[2026-01-09 03:28:41] 2026-01-09 08:28:08,463 | INFO     | sum of deviations: -8462995399.500001
[2026-01-09 03:28:41] 2026-01-09 08:28:08,463 | INFO     | mean x: 1767944280.5
[2026-01-09 03:28:41] 2026-01-09 08:28:08,463 | INFO     | mean y: 2717257.826530612
[2026-01-09 03:28:41] 2026-01-09 08:28:08,463 | INFO     | intersect: 51274834267.23238
[2026-01-09 03:28:41] 2026-01-09 08:28:08,463 | INFO     | chi2: 0.07715791909518224
[2026-01-09 03:28:41] 2026-01-09 08:28:08,463 | INFO     | current chi2=0.07715791909518224 (change=94.92338617377395 %)
[2026-01-09 03:28:41] 2026-01-09 08:28:08,464 | INFO     | sum of square deviations: 249388862.0
[2026-01-09 03:28:41] 2026-01-09 08:28:08,464 | INFO     | sum of deviations: -6528513166.0
[2026-01-09 03:28:41] 2026-01-09 08:28:08,464 | INFO     | mean x: 1767944433.0
[2026-01-09 03:28:41] 2026-01-09 08:28:08,464 | INFO     | mean y: 2710196.3440860217
[2026-01-09 03:28:41] 2026-01-09 08:28:08,464 | INFO     | intersect: 46284041347.35958
[2026-01-09 03:28:41] 2026-01-09 08:28:08,464 | INFO     | chi2: 0.07175702395651908
[2026-01-09 03:28:41] 2026-01-09 08:28:08,465 | INFO     | current chi2=0.07175702395651908 (change=6.999793672507687 %)
[2026-01-09 03:28:41] 2026-01-09 08:28:08,465 | INFO     | left removable region: 20
[2026-01-09 03:28:41] 2026-01-09 08:28:08,465 | INFO     | sum of square deviations: 141539398.0
[2026-01-09 03:28:41] 2026-01-09 08:28:08,465 | INFO     | sum of deviations: -273058448.0
[2026-01-09 03:28:41] 2026-01-09 08:28:08,465 | INFO     | mean x: 1767944555.0
[2026-01-09 03:28:41] 2026-01-09 08:28:08,465 | INFO     | mean y: 2682896.5194805195
[2026-01-09 03:28:41] 2026-01-09 08:28:08,465 | INFO     | intersect: 3413409543.374024
[2026-01-09 03:28:41] 2026-01-09 08:28:08,466 | INFO     | chi2: 0.021538846646084468
[2026-01-09 03:28:41] 2026-01-09 08:28:08,466 | INFO     | current memory leak: -1.93 B/s (using 77 data points, chi2=0.02)
[2026-01-09 03:28:41] 2026-01-09 08:28:08,466 | INFO     | could have reported an average CPU frequency of 2191 MHz (7 samples)
[2026-01-09 03:28:41] 2026-01-09 08:28:08,466 | INFO     | ..............................
[2026-01-09 03:28:41] 2026-01-09 08:28:08,466 | INFO     | . Timing measurements:
[2026-01-09 03:28:41] 2026-01-09 08:28:08,466 | INFO     | . get job = 0 s
[2026-01-09 03:28:41] 2026-01-09 08:28:08,466 | INFO     | . initial setup = 2 s
[2026-01-09 03:28:41] 2026-01-09 08:28:08,467 | INFO     | . payload setup = 7 s
[2026-01-09 03:28:41] 2026-01-09 08:28:08,467 | INFO     | . stage-in = 0 s
[2026-01-09 03:28:41] 2026-01-09 08:28:08,467 | INFO     | . payload execution = 6265 s
[2026-01-09 03:28:41] 2026-01-09 08:28:08,467 | INFO     | . stage-out = 0 s
[2026-01-09 03:28:41] 2026-01-09 08:28:08,467 | INFO     | . log creation = 0 s
[2026-01-09 03:28:41] 2026-01-09 08:28:08,467 | INFO     | ..............................
[2026-01-09 03:28:41] 2026-01-09 08:28:08,541 | INFO     | 
[2026-01-09 03:28:41] 2026-01-09 08:28:08,541 | INFO     | job summary report
[2026-01-09 03:28:41] 2026-01-09 08:28:08,542 | INFO     | --------------------------------------------------
[2026-01-09 03:28:41] 2026-01-09 08:28:08,542 | INFO     | PanDA job id: 6963167983
[2026-01-09 03:28:41] 2026-01-09 08:28:08,542 | INFO     | task id: 47898826
[2026-01-09 03:28:41] 2026-01-09 08:28:08,542 | INFO     | errors: (none)
[2026-01-09 03:28:41] 2026-01-09 08:28:08,542 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 03:28:41] 2026-01-09 08:28:08,542 | INFO     | pilot state: finished 
[2026-01-09 03:28:41] 2026-01-09 08:28:08,542 | INFO     | transexitcode: 0
[2026-01-09 03:28:41] 2026-01-09 08:28:08,542 | INFO     | exeerrorcode: 0
[2026-01-09 03:28:41] 2026-01-09 08:28:08,542 | INFO     | exeerrordiag: 
[2026-01-09 03:28:41] 2026-01-09 08:28:08,542 | INFO     | exitcode: 0
[2026-01-09 03:28:41] 2026-01-09 08:28:08,543 | INFO     | exitmsg: OK
[2026-01-09 03:28:41] 2026-01-09 08:28:08,543 | INFO     | cpuconsumptiontime: 67693 s
[2026-01-09 03:28:41] 2026-01-09 08:28:08,543 | INFO     | nevents: 400
[2026-01-09 03:28:41] 2026-01-09 08:28:08,543 | INFO     | neventsw: 0
[2026-01-09 03:28:41] 2026-01-09 08:28:08,543 | INFO     | pid: 19220
[2026-01-09 03:28:41] 2026-01-09 08:28:08,543 | INFO     | pgrp: 19220
[2026-01-09 03:28:41] 2026-01-09 08:28:08,543 | INFO     | corecount: 12
[2026-01-09 03:28:41] 2026-01-09 08:28:08,543 | INFO     | event service: False
[2026-01-09 03:28:41] 2026-01-09 08:28:08,543 | INFO     | sizes: {0: 2283971, 5: 2284233, 11: 2284289, 6275: 2311230, 6276: 2311229, 6277: 2320283, 6279: 2320467, 6284: 2320661}
[2026-01-09 03:28:41] 2026-01-09 08:28:08,543 | INFO     | --------------------------------------------------
[2026-01-09 03:28:41] 2026-01-09 08:28:08,544 | INFO     | 
[2026-01-09 03:28:41] 2026-01-09 08:28:08,544 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 03:28:41] 2026-01-09 08:28:08,561 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,561 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,561 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,561 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,562 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,562 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,562 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,562 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,562 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,562 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,562 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,562 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,563 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,563 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,563 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,563 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,563 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 03:28:41] 2026-01-09 08:28:08,563 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,563 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 03:28:41] 2026-01-09 08:28:08,563 | INFO     | job 6963167983 has completed (purged errors)
[2026-01-09 03:28:41] 2026-01-09 08:28:08,563 | INFO     | overall cleanup function is called
[2026-01-09 03:28:41] 2026-01-09 08:28:09,571 | INFO     | --- collectZombieJob: --- 10, [19220]
[2026-01-09 03:28:41] 2026-01-09 08:28:09,571 | INFO     | zombie collector waiting for pid 19220
[2026-01-09 03:28:41] 2026-01-09 08:28:09,571 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 03:28:41] 2026-01-09 08:28:09,571 | INFO     | collected zombie processes
[2026-01-09 03:28:41] 2026-01-09 08:28:09,571 | INFO     | will attempt to kill all subprocesses of pid=19220
[2026-01-09 03:28:41] 2026-01-09 08:28:09,661 | INFO     | process IDs to be killed: [19220] (in reverse order)
[2026-01-09 03:28:41] 2026-01-09 08:28:09,702 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 03:28:41] 2026-01-09 08:28:09,702 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 03:28:41] 2026-01-09 08:28:09,705 | INFO     | did not find any defunct processes belonging to 19220
[2026-01-09 03:28:41] 2026-01-09 08:28:09,707 | INFO     | did not find any defunct processes belonging to 19220
[2026-01-09 03:28:41] 2026-01-09 08:28:09,707 | INFO     | ready for new job
[2026-01-09 03:28:41] 2026-01-09 08:28:09,707 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 03:28:41] 2026-01-09 08:28:09,708 | INFO     | ***************************************
[2026-01-09 03:28:41] 2026-01-09 08:28:09,708 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 03:28:41] 2026-01-09 08:28:09,708 | INFO     | ***************************************
[2026-01-09 03:28:41] 2026-01-09 08:28:09,708 | INFO     | 
[2026-01-09 03:28:41] 2026-01-09 08:28:09,709 | INFO     | architecture information:
[2026-01-09 03:28:41] 2026-01-09 08:28:09,709 | INFO     | executing command: cat /etc/os-release
[2026-01-09 03:28:41] 2026-01-09 08:28:09,720 | INFO     | cat /etc/os-release:
[2026-01-09 03:28:41] NAME="CentOS Linux"
[2026-01-09 03:28:41] VERSION="7 (Core)"
[2026-01-09 03:28:41] ID="centos"
[2026-01-09 03:28:41] ID_LIKE="rhel fedora"
[2026-01-09 03:28:41] VERSION_ID="7"
[2026-01-09 03:28:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 03:28:41] ANSI_COLOR="0;31"
[2026-01-09 03:28:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 03:28:41] HOME_URL="https://www.centos.org/"
[2026-01-09 03:28:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 03:28:41] 
[2026-01-09 03:28:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 03:28:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 03:28:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 03:28:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 03:28:41] 
[2026-01-09 03:28:41] 2026-01-09 08:28:09,720 | INFO     | ***************************************
[2026-01-09 03:28:41] 2026-01-09 08:28:10,223 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 03:28:41] 2026-01-09 08:28:10,235 | INFO     | sufficient remaining disk space (29311893504 B)
[2026-01-09 03:28:41] 2026-01-09 08:28:10,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 03:28:41] 2026-01-09 08:28:10,236 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 03:28:41] 2026-01-09 08:28:10,236 | INFO     | update_server=False
[2026-01-09 03:28:41] 2026-01-09 08:28:10,236 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 03:28:41] 2026-01-09 08:28:10,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:28:41] 2026-01-09 08:28:10,236 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 03:28:41] 2026-01-09 08:28:10,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 03:28:41] 2026-01-09 08:28:10,441 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:28:41] 2026-01-09 08:28:10,441 | INFO     | aborting loop
[2026-01-09 03:28:41] 2026-01-09 08:28:11,098 | INFO     | all data control threads have been joined
[2026-01-09 03:28:41] 2026-01-09 08:28:11,241 | INFO     | [job] retrieve thread has finished
[2026-01-09 03:28:41] 2026-01-09 08:28:11,242 | INFO     | [job] queue monitor thread has finished
[2026-01-09 03:28:41] 2026-01-09 08:28:11,419 | INFO     | all job control threads have been joined
[2026-01-09 03:28:41] 2026-01-09 08:28:11,446 | INFO     | [job] job monitor thread has finished
[2026-01-09 03:28:41] 2026-01-09 08:28:11,582 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 03:28:41] 2026-01-09 08:28:11,601 | INFO     | all payload control threads have been joined
[2026-01-09 03:28:41] 2026-01-09 08:28:12,065 | INFO     | [payload] failed_post thread has finished
[2026-01-09 03:28:41] 2026-01-09 08:28:12,099 | INFO     | [data] control thread has finished
[2026-01-09 03:28:41] 2026-01-09 08:28:12,242 | INFO     | [data] copytool_out thread has finished
[2026-01-09 03:28:41] 2026-01-09 08:28:12,353 | INFO     | [payload] validate_post thread has finished
[2026-01-09 03:28:41] 2026-01-09 08:28:12,369 | INFO     | [job] validate thread has finished
[2026-01-09 03:28:41] 2026-01-09 08:28:12,370 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 03:28:41] 2026-01-09 08:28:12,426 | INFO     | [job] control thread has finished
[2026-01-09 03:28:41] 2026-01-09 08:28:12,520 | INFO     | [data] copytool_in thread has finished
[2026-01-09 03:28:41] 2026-01-09 08:28:12,531 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 03:28:41] 2026-01-09 08:28:12,607 | INFO     | [payload] control thread has finished
[2026-01-09 03:28:41] 2026-01-09 08:28:14,242 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 03:28:41] 2026-01-09 08:28:17,727 | INFO     | [monitor] cgroup control has ended
[2026-01-09 03:28:41] 2026-01-09 08:28:20,511 | INFO     | job.realtimelogging is not enabled
[2026-01-09 03:28:41] 2026-01-09 08:28:21,517 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 03:28:41] 2026-01-09 08:28:21,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140300414441280)>', '<ExcThread(monitor, started 140299972097792)>']
[2026-01-09 03:28:41] 2026-01-09 08:28:26,868 | INFO     | all workflow threads have been joined
[2026-01-09 03:28:41] 2026-01-09 08:28:26,868 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 03:28:41] 2026-01-09 08:28:26,868 | INFO     | traces error code: 0
[2026-01-09 03:28:41] 2026-01-09 08:28:26,869 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 03:28:41] 2026-01-09 08:28:41,196 | INFO     | PID=12840 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 03:28:41] 2026-01-09 08:28:41,198 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 03:28:41] 2026-01-09 08:28:41,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 03:28:41] 2026-01-09 08:28:41,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 03:28:41] 2026-01-09 08:28:41,198 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 03:28:41] 2026-01-09 08:28:41,198 | INFO     | [monitor] control thread has ended
[2026-01-09 03:28:41] 2026-01-09 08:28:41,281 [wrapper] ==== pilot stdout END ====
[2026-01-09 03:28:41] 2026-01-09 08:28:41,283 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 03:28:41] 2026-01-09 08:28:41,285 [wrapper] pilotpid: 12840
[2026-01-09 03:28:41] 2026-01-09 08:28:41,288 [wrapper] Pilot exit status: 0
[2026-01-09 03:28:41] 2026-01-09 08:28:41,297 [wrapper] pandaids: 6963167983
[2026-01-09 03:28:41] 2026-01-09 08:28:41,325 [wrapper] cleanup supervisor_pilot  2661 12841
[2026-01-09 03:28:41] 2026-01-09 08:28:41,327 [wrapper] Test setup, not cleaning
[2026-01-09 03:28:41] 2026-01-09 08:28:41,329 [wrapper] apfmon messages muted
[2026-01-09 03:28:41] 2026-01-09 08:28:41,332 [wrapper] ==== wrapper stdout END ====
[2026-01-09 03:28:41] 2026-01-09 08:28:41,334 [wrapper] ==== wrapper stderr END ====
[2026-01-09 03:28:41]  *** Error codes and diagnostics ***
[2026-01-09 03:28:41]     "exeErrorCode": 0,
[2026-01-09 03:28:41]     "exeErrorDiag": "",
[2026-01-09 03:28:41]     "pilotErrorCode": 0,
[2026-01-09 03:28:41]     "pilotErrorDiag": "",
[2026-01-09 03:28:41]  *** Listing of results directory ***
[2026-01-09 03:28:41] total 440736
[2026-01-09 03:28:41] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 03:28:41] -rwx------ 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 03:28:41] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 19:59 queuedata.json
[2026-01-09 03:28:41] -rw-r--r-- 1 boincer umatlas       100 Jan  9 01:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 03:28:41] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 01:42 run_atlas
[2026-01-09 03:28:41] -rw-r--r-- 1 boincer umatlas       105 Jan  9 01:42 job.xml
[2026-01-09 03:28:41] -rw-r--r-- 2 boincer umatlas 225184492 Jan  9 01:42 EVNT.47898824._001386.pool.root.1
[2026-01-09 03:28:41] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 01:42 start_atlas.sh
[2026-01-09 03:28:41] drwxrwx--x 2 boincer umatlas      4096 Jan  9 01:42 shared
[2026-01-09 03:28:41] -rw-r--r-- 2 boincer umatlas    592396 Jan  9 01:42 input.tar.gz
[2026-01-09 03:28:41] -rw-r--r-- 1 boincer umatlas         0 Jan  9 01:42 boinc_lockfile
[2026-01-09 03:28:41] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 01:42 pandaJob.out
[2026-01-09 03:28:41] -rw------- 1 boincer umatlas        57 Jan  9 01:42 setup.sh.local
[2026-01-09 03:28:41] -rw------- 1 boincer umatlas    989771 Jan  9 01:43 agis_schedconf.cvmfs.json
[2026-01-09 03:28:41] -rw------- 1 boincer umatlas   1516240 Jan  9 01:43 agis_ddmendpoints.agis.ALL.json
[2026-01-09 03:28:41] drwx------ 5 boincer umatlas      4096 Jan  9 01:43 pilot3
[2026-01-09 03:28:41] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 03:21 init_data.xml
[2026-01-09 03:28:41] -rw------- 1 boincer umatlas 219619255 Jan  9 03:27 HITS.47898826._036185.pool.root.1
[2026-01-09 03:28:41] -rw-r--r-- 1 boincer umatlas       530 Jan  9 03:27 boinc_task_state.xml
[2026-01-09 03:28:41] -rw------- 1 boincer umatlas      1051 Jan  9 03:27 memory_monitor_summary.json
[2026-01-09 03:28:41] -rw------- 1 boincer umatlas    408914 Jan  9 03:28 log.47898826._036185.job.log.tgz.1
[2026-01-09 03:28:41] -rw------- 1 boincer umatlas      7853 Jan  9 03:28 heartbeat.json
[2026-01-09 03:28:41] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 03:28 boinc_mmap_file
[2026-01-09 03:28:41] -rw-r--r-- 1 boincer umatlas        27 Jan  9 03:28 wrapper_checkpoint.txt
[2026-01-09 03:28:41] -rw------- 1 boincer umatlas       745 Jan  9 03:28 pilotlog.txt
[2026-01-09 03:28:41] -rw------- 1 boincer umatlas        95 Jan  9 03:28 pilot_heartbeat.json
[2026-01-09 03:28:41] -rw------- 1 boincer umatlas    892190 Jan  9 03:28 log.47898826._036185.job.log.1
[2026-01-09 03:28:41] -rw------- 1 boincer umatlas       357 Jan  9 03:28 output.list
[2026-01-09 03:28:41] -rw-r--r-- 1 boincer umatlas       620 Jan  9 03:28 runtime_log
[2026-01-09 03:28:41] -rw------- 1 boincer umatlas   1320960 Jan  9 03:28 result.tar.gz
[2026-01-09 03:28:41] -rw------- 1 boincer umatlas       660 Jan  9 03:28 UdJMDmB0Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlslKDmrCQtym.diag
[2026-01-09 03:28:41] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 03:28 runtime_log.err
[2026-01-09 03:28:41] -rw-r--r-- 1 boincer umatlas     21396 Jan  9 03:28 stderr.txt
[2026-01-09 03:28:41] HITS file was successfully produced:
[2026-01-09 03:28:41] -rw------- 1 boincer umatlas 219619255 Jan  9 03:27 shared/HITS.pool.root.1
[2026-01-09 03:28:41]  *** Contents of shared directory: ***
[2026-01-09 03:28:41] total 436272
[2026-01-09 03:28:41] -rw-r--r-- 2 boincer umatlas 225184492 Jan  9 01:42 ATLAS.root_0
[2026-01-09 03:28:41] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 01:42 start_atlas.sh
[2026-01-09 03:28:41] -rw-r--r-- 2 boincer umatlas    592396 Jan  9 01:42 input.tar.gz
[2026-01-09 03:28:41] -rw------- 1 boincer umatlas 219619255 Jan  9 03:27 HITS.pool.root.1
[2026-01-09 03:28:41] -rw------- 1 boincer umatlas   1320960 Jan  9 03:28 result.tar.gz
03:28:42 (9106): run_atlas exited; CPU time 67675.996844
03:28:42 (9106): called boinc_finish(0)

</stderr_txt>
]]>

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