Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:30:40 (9769): wrapper (7.7.26015): starting
10:30:40 (9769): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 10:30:40] Arguments: --nthreads 8
[2026-01-09 10:30:40] Threads: 8
[2026-01-09 10:30:40] Checking for CVMFS
[2026-01-09 10:30:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:30:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:30:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:30:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:30:41] 2.11.2.0 31595 35236 120560 154938 1 57 22552864 25165824 0 130560 0 16537136 99.819 9469634 2930 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 10:30:41] CVMFS is ok
[2026-01-09 10:30:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:30:41] Checking for apptainer binary...
[2026-01-09 10:30:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:30:41] Running /usr/bin/apptainer --version
[2026-01-09 10:30:41] apptainer version 1.3.2-1.el7
[2026-01-09 10:30:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:30:42] cg-vwn421.simple-grid.lan
[2026-01-09 10:30:42] apptainer works
[2026-01-09 10:30:42] Set ATHENA_PROC_NUMBER=8
[2026-01-09 10:30:42] Set ATHENA_CORE_NUMBER=8
[2026-01-09 10:30:42] Starting ATLAS job with PandaID=6963167944
[2026-01-09 10:30:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:09:20]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:09:20] 2026-01-09 12:08:23,315 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6963167944/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:09:20] 2026-01-09 12:08:23,316 | INFO     | extracted standard info from prmon json
[2026-01-09 13:09:20] 2026-01-09 12:08:23,316 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:09:20] 2026-01-09 12:08:23,316 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:09:20] 2026-01-09 12:08:23,317 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:09:20] 2026-01-09 12:08:23,317 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:09:20] 2026-01-09 12:08:23,321 | INFO     | fitting pss+swap vs Time
[2026-01-09 13:09:20] 2026-01-09 12:08:23,321 | INFO     | sum of square deviations: 1154663510.0
[2026-01-09 13:09:20] 2026-01-09 12:08:23,322 | INFO     | sum of deviations: -19612058455.0
[2026-01-09 13:09:20] 2026-01-09 12:08:23,322 | INFO     | mean x: 1767955790.0
[2026-01-09 13:09:20] 2026-01-09 12:08:23,323 | INFO     | mean y: 2523918.6322580646
[2026-01-09 13:09:20] 2026-01-09 12:08:23,323 | INFO     | intersect: 30031404193.315666
[2026-01-09 13:09:20] 2026-01-09 12:08:23,323 | INFO     | chi2: 2.469952103759357
[2026-01-09 13:09:20] 2026-01-09 12:08:23,323 | INFO     | sum of square deviations: 1046484737.5
[2026-01-09 13:09:20] 2026-01-09 12:08:23,324 | INFO     | sum of deviations: -8547837005.5
[2026-01-09 13:09:20] 2026-01-09 12:08:23,325 | INFO     | mean x: 1767955637.5
[2026-01-09 13:09:20] 2026-01-09 12:08:23,325 | INFO     | mean y: 2539139.953333333
[2026-01-09 13:09:20] 2026-01-09 12:08:23,325 | INFO     | intersect: 14443453642.354132
[2026-01-09 13:09:20] 2026-01-09 12:08:23,325 | INFO     | chi2: 1.7099966012351626
[2026-01-09 13:09:20] 2026-01-09 12:08:23,325 | INFO     | current chi2=1.7099966012351626 (change=30.768025880644178 %)
[2026-01-09 13:09:20] 2026-01-09 12:08:23,326 | INFO     | sum of square deviations: 945282840.0
[2026-01-09 13:09:20] 2026-01-09 12:08:23,327 | INFO     | sum of deviations: -7887144145.000002
[2026-01-09 13:09:20] 2026-01-09 12:08:23,327 | INFO     | mean x: 1767955485.0
[2026-01-09 13:09:20] 2026-01-09 12:08:23,327 | INFO     | mean y: 2540136.0068965517
[2026-01-09 13:09:20] 2026-01-09 12:08:23,327 | INFO     | intersect: 14753807335.714436
[2026-01-09 13:09:20] 2026-01-09 12:08:23,327 | INFO     | chi2: 1.7093174842821721
[2026-01-09 13:09:20] 2026-01-09 12:08:23,327 | INFO     | current chi2=1.7093174842821721 (change=0.039714520631208304 %)
[2026-01-09 13:09:20] 2026-01-09 12:08:23,328 | INFO     | right removable region: 144
[2026-01-09 13:09:20] 2026-01-09 12:08:23,328 | INFO     | sum of square deviations: 1046484737.5
[2026-01-09 13:09:20] 2026-01-09 12:08:23,329 | INFO     | sum of deviations: -43526038911.5
[2026-01-09 13:09:20] 2026-01-09 12:08:23,329 | INFO     | mean x: 1767955942.5
[2026-01-09 13:09:20] 2026-01-09 12:08:23,329 | INFO     | mean y: 2557131.0866666664
[2026-01-09 13:09:20] 2026-01-09 12:08:23,329 | INFO     | intersect: 73536471568.20253
[2026-01-09 13:09:20] 2026-01-09 12:08:23,330 | INFO     | chi2: 0.9499136636004455
[2026-01-09 13:09:20] 2026-01-09 12:08:23,330 | INFO     | current chi2=0.9499136636004455 (change=61.541211177551084 %)
[2026-01-09 13:09:20] 2026-01-09 12:08:23,330 | INFO     | sum of square deviations: 945282840.0
[2026-01-09 13:09:20] 2026-01-09 12:08:23,331 | INFO     | monitor loop #645: job 0:6963167944 is in state 'finished'
[2026-01-09 13:09:20] 2026-01-09 12:08:23,332 | INFO     | sum of deviations: -41269437332.99999
[2026-01-09 13:09:20] 2026-01-09 12:08:23,332 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 13:09:20] 2026-01-09 12:08:23,332 | INFO     | mean x: 1767956095.0
[2026-01-09 13:09:20] 2026-01-09 12:08:23,333 | INFO     | mean y: 2553666.793103448
[2026-01-09 13:09:20] 2026-01-09 12:08:23,333 | INFO     | intersect: 77188502869.14812
[2026-01-09 13:09:20] 2026-01-09 12:08:23,333 | INFO     | chi2: 0.9383562172400182
[2026-01-09 13:09:20] 2026-01-09 12:08:23,333 | INFO     | current chi2=0.9383562172400182 (change=1.2166838738397852 %)
[2026-01-09 13:09:20] 2026-01-09 12:08:23,333 | INFO     | left removable region: 20
[2026-01-09 13:09:20] 2026-01-09 12:08:23,334 | INFO     | sum of square deviations: 591173875.0
[2026-01-09 13:09:20] 2026-01-09 12:08:23,335 | INFO     | sum of deviations: -20952677963.99999
[2026-01-09 13:09:20] 2026-01-09 12:08:23,335 | INFO     | mean x: 1767956064.5
[2026-01-09 13:09:20] 2026-01-09 12:08:23,335 | INFO     | mean y: 2558462.370967742
[2026-01-09 13:09:20] 2026-01-09 12:08:23,335 | INFO     | intersect: 62663334996.12644
[2026-01-09 13:09:20] 2026-01-09 12:08:23,335 | INFO     | chi2: 0.12989967564140867
[2026-01-09 13:09:20] 2026-01-09 12:08:23,335 | INFO     | current memory leak: -35.44 B/s (using 124 data points, chi2=0.13)
[2026-01-09 13:09:20] 2026-01-09 12:08:23,336 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-09 13:09:20] 2026-01-09 12:08:23,336 | INFO     | ..............................
[2026-01-09 13:09:20] 2026-01-09 12:08:23,336 | INFO     | . Timing measurements:
[2026-01-09 13:09:20] 2026-01-09 12:08:23,336 | INFO     | . get job = 0 s
[2026-01-09 13:09:20] 2026-01-09 12:08:23,337 | INFO     | . initial setup = 1 s
[2026-01-09 13:09:20] 2026-01-09 12:08:23,337 | INFO     | . payload setup = 8 s
[2026-01-09 13:09:20] 2026-01-09 12:08:23,337 | INFO     | . stage-in = 0 s
[2026-01-09 13:09:20] 2026-01-09 12:08:23,337 | INFO     | . payload execution = 9406 s
[2026-01-09 13:09:20] 2026-01-09 12:08:23,337 | INFO     | . stage-out = 1 s
[2026-01-09 13:09:20] 2026-01-09 12:08:23,337 | INFO     | . log creation = 0 s
[2026-01-09 13:09:20] 2026-01-09 12:08:23,337 | INFO     | ..............................
[2026-01-09 13:09:20] 2026-01-09 12:08:23,651 | INFO     | 
[2026-01-09 13:09:20] 2026-01-09 12:08:23,652 | INFO     | job summary report
[2026-01-09 13:09:20] 2026-01-09 12:08:23,652 | INFO     | --------------------------------------------------
[2026-01-09 13:09:20] 2026-01-09 12:08:23,652 | INFO     | PanDA job id: 6963167944
[2026-01-09 13:09:20] 2026-01-09 12:08:23,652 | INFO     | task id: 47898826
[2026-01-09 13:09:20] 2026-01-09 12:08:23,652 | INFO     | errors: (none)
[2026-01-09 13:09:20] 2026-01-09 12:08:23,652 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:09:20] 2026-01-09 12:08:23,652 | INFO     | pilot state: finished 
[2026-01-09 13:09:20] 2026-01-09 12:08:23,653 | INFO     | transexitcode: 0
[2026-01-09 13:09:20] 2026-01-09 12:08:23,653 | INFO     | exeerrorcode: 0
[2026-01-09 13:09:20] 2026-01-09 12:08:23,653 | INFO     | exeerrordiag: 
[2026-01-09 13:09:20] 2026-01-09 12:08:23,653 | INFO     | exitcode: 0
[2026-01-09 13:09:20] 2026-01-09 12:08:23,653 | INFO     | exitmsg: OK
[2026-01-09 13:09:20] 2026-01-09 12:08:23,653 | INFO     | cpuconsumptiontime: 71461 s
[2026-01-09 13:09:20] 2026-01-09 12:08:23,653 | INFO     | nevents: 400
[2026-01-09 13:09:20] 2026-01-09 12:08:23,653 | INFO     | neventsw: 0
[2026-01-09 13:09:20] 2026-01-09 12:08:23,653 | INFO     | pid: 19943
[2026-01-09 13:09:20] 2026-01-09 12:08:23,654 | INFO     | pgrp: 19943
[2026-01-09 13:09:20] 2026-01-09 12:08:23,654 | INFO     | corecount: 8
[2026-01-09 13:09:20] 2026-01-09 12:08:23,654 | INFO     | event service: False
[2026-01-09 13:09:20] 2026-01-09 12:08:23,654 | INFO     | sizes: {0: 2283800, 1: 2283999, 2: 2283999, 7: 2284289, 12: 2284317, 9418: 2312409, 9419: 2321409, 9420: 2321465, 9426: 2321659}
[2026-01-09 13:09:20] 2026-01-09 12:08:23,654 | INFO     | --------------------------------------------------
[2026-01-09 13:09:20] 2026-01-09 12:08:23,654 | INFO     | 
[2026-01-09 13:09:20] 2026-01-09 12:08:23,654 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2026-01-09 13:09:20] 2026-01-09 12:08:23,679 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,679 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,679 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,679 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,679 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,680 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,680 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,680 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,680 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,680 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,680 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,680 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,680 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,680 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,681 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,681 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,681 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,681 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:09:20] 2026-01-09 12:08:23,681 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,681 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:09:20] 2026-01-09 12:08:23,681 | INFO     | job 6963167944 has completed (purged errors)
[2026-01-09 13:09:20] 2026-01-09 12:08:23,681 | INFO     | overall cleanup function is called
[2026-01-09 13:09:20] 2026-01-09 12:08:24,690 | INFO     | --- collectZombieJob: --- 10, [19943]
[2026-01-09 13:09:20] 2026-01-09 12:08:24,690 | INFO     | zombie collector waiting for pid 19943
[2026-01-09 13:09:20] 2026-01-09 12:08:24,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:09:20] 2026-01-09 12:08:24,690 | INFO     | collected zombie processes
[2026-01-09 13:09:20] 2026-01-09 12:08:24,690 | INFO     | will attempt to kill all subprocesses of pid=19943
[2026-01-09 13:09:20] 2026-01-09 12:08:24,754 | INFO     | process IDs to be killed: [19943] (in reverse order)
[2026-01-09 13:09:20] 2026-01-09 12:08:24,804 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:09:20] 2026-01-09 12:08:24,804 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:09:20] 2026-01-09 12:08:24,806 | INFO     | did not find any defunct processes belonging to 19943
[2026-01-09 13:09:20] 2026-01-09 12:08:24,808 | INFO     | did not find any defunct processes belonging to 19943
[2026-01-09 13:09:20] 2026-01-09 12:08:24,808 | INFO     | ready for new job
[2026-01-09 13:09:20] 2026-01-09 12:08:24,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:09:20] 2026-01-09 12:08:24,810 | INFO     | ***************************************
[2026-01-09 13:09:20] 2026-01-09 12:08:24,810 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:09:20] 2026-01-09 12:08:24,810 | INFO     | ***************************************
[2026-01-09 13:09:20] 2026-01-09 12:08:24,810 | INFO     | 
[2026-01-09 13:09:20] 2026-01-09 12:08:24,811 | INFO     | pilot is running in a VM
[2026-01-09 13:09:20] 2026-01-09 12:08:24,811 | INFO     | architecture information:
[2026-01-09 13:09:20] 2026-01-09 12:08:24,812 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:09:20] 2026-01-09 12:08:24,829 | INFO     | cat /etc/os-release:
[2026-01-09 13:09:20] NAME="CentOS Linux"
[2026-01-09 13:09:20] VERSION="7 (Core)"
[2026-01-09 13:09:20] ID="centos"
[2026-01-09 13:09:20] ID_LIKE="rhel fedora"
[2026-01-09 13:09:20] VERSION_ID="7"
[2026-01-09 13:09:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:09:20] ANSI_COLOR="0;31"
[2026-01-09 13:09:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:09:20] HOME_URL="https://www.centos.org/"
[2026-01-09 13:09:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:09:20] 
[2026-01-09 13:09:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:09:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:09:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:09:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:09:20] 
[2026-01-09 13:09:20] 2026-01-09 12:08:24,830 | INFO     | ***************************************
[2026-01-09 13:09:20] 2026-01-09 12:08:25,333 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2026-01-09 13:09:20] 2026-01-09 12:08:25,358 | INFO     | sufficient remaining disk space (498136514560 B)
[2026-01-09 13:09:20] 2026-01-09 12:08:25,359 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:09:20] 2026-01-09 12:08:25,359 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:09:20] 2026-01-09 12:08:25,359 | INFO     | update_server=False
[2026-01-09 13:09:20] 2026-01-09 12:08:25,359 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:09:20] 2026-01-09 12:08:25,360 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:09:20] 2026-01-09 12:08:25,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:09:20] 2026-01-09 12:08:25,840 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 13:09:20] 2026-01-09 12:08:25,840 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 13:09:20] 2026-01-09 12:08:25,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:09:20] 2026-01-09 12:08:25,840 | INFO     | will abort loop
[2026-01-09 13:09:20] 2026-01-09 12:08:25,882 | INFO     | all data control threads have been joined
[2026-01-09 13:09:20] 2026-01-09 12:08:26,360 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:09:20] 2026-01-09 12:08:26,366 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:09:20] 2026-01-09 12:08:26,392 | INFO     | all job control threads have been joined
[2026-01-09 13:09:20] 2026-01-09 12:08:26,556 | INFO     | all payload control threads have been joined
[2026-01-09 13:09:20] 2026-01-09 12:08:26,666 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:09:20] 2026-01-09 12:08:26,806 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:09:20] 2026-01-09 12:08:26,846 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:09:20] 2026-01-09 12:08:26,888 | INFO     | [data] control thread has finished
[2026-01-09 13:09:20] 2026-01-09 12:08:26,922 | INFO     | [job] validate thread has finished
[2026-01-09 13:09:20] 2026-01-09 12:08:27,081 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:09:20] 2026-01-09 12:08:27,152 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:09:20] 2026-01-09 12:08:27,219 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:09:20] 2026-01-09 12:08:27,250 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:09:20] 2026-01-09 12:08:27,366 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:09:20] 2026-01-09 12:08:27,397 | INFO     | [job] control thread has finished
[2026-01-09 13:09:20] 2026-01-09 12:08:27,562 | INFO     | [payload] control thread has finished
[2026-01-09 13:09:20] 2026-01-09 12:08:27,633 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:09:20] 2026-01-09 12:08:27,633 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:09:20] 2026-01-09 12:08:31,226 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:09:20] 2026-01-09 12:08:56,406 | INFO     | PID=13500 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 13:09:20] 2026-01-09 12:08:56,407 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:09:20] 2026-01-09 12:08:56,407 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:09:20] 2026-01-09 12:08:56,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:09:20] 2026-01-09 12:09:14,500 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:09:20] 2026-01-09 12:09:15,189 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600503396160)>', '<ExcThread(monitor, started 140599697069824)>']
[2026-01-09 13:09:20] 2026-01-09 12:09:15,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:09:20] 2026-01-09 12:09:15,506 | INFO     | [monitor] control thread has ended
[2026-01-09 13:09:20] 2026-01-09 12:09:20,202 | INFO     | all workflow threads have been joined
[2026-01-09 13:09:20] 2026-01-09 12:09:20,203 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:09:20] 2026-01-09 12:09:20,203 | INFO     | traces error code: 0
[2026-01-09 13:09:20] 2026-01-09 12:09:20,203 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:09:20] 2026-01-09 12:09:20,352 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:09:20] 2026-01-09 12:09:20,357 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:09:20] 2026-01-09 12:09:20,361 [wrapper] pilotpid: 13500
[2026-01-09 13:09:20] 2026-01-09 12:09:20,366 [wrapper] Pilot exit status: 0
[2026-01-09 13:09:20] 2026-01-09 12:09:20,388 [wrapper] pandaids: 6963167944
[2026-01-09 13:09:20] 2026-01-09 12:09:20,437 [wrapper] cleanup supervisor_pilot  4330 13501
[2026-01-09 13:09:20] 2026-01-09 12:09:20,444 [wrapper] Test setup, not cleaning
[2026-01-09 13:09:20] 2026-01-09 12:09:20,447 [wrapper] apfmon messages muted
[2026-01-09 13:09:20] 2026-01-09 12:09:20,451 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:09:20] 2026-01-09 12:09:20,454 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:09:20]  *** Error codes and diagnostics ***
[2026-01-09 13:09:20]     "exeErrorCode": 0,
[2026-01-09 13:09:20]     "exeErrorDiag": "",
[2026-01-09 13:09:20]     "pilotErrorCode": 0,
[2026-01-09 13:09:20]     "pilotErrorDiag": "",
[2026-01-09 13:09:20]  *** Listing of results directory ***
[2026-01-09 13:09:20] total 432416
[2026-01-09 13:09:20] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 13:09:20] -rwx------. 1 boinc boinc     36322 Jan  9 01:57 runpilot2-wrapper.sh
[2026-01-09 13:09:20] -rw-r--r--. 1 boinc boinc      5112 Jan  9 01:59 queuedata.json
[2026-01-09 13:09:20] -rw-r--r--. 1 boinc boinc       100 Jan  9 10:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:09:20] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 10:30 run_atlas
[2026-01-09 13:09:20] -rw-r--r--. 1 boinc boinc       105 Jan  9 10:30 job.xml
[2026-01-09 13:09:20] -rw-r--r--. 1 boinc boinc      6390 Jan  9 10:30 init_data.xml
[2026-01-09 13:09:20] -rw-r--r--. 2 boinc boinc 222352661 Jan  9 10:30 EVNT.47898824._001344.pool.root.1
[2026-01-09 13:09:20] -rw-r--r--. 2 boinc boinc     15847 Jan  9 10:30 start_atlas.sh
[2026-01-09 13:09:20] drwxrwx--x. 2 boinc boinc        68 Jan  9 10:30 shared
[2026-01-09 13:09:20] -rw-r--r--. 2 boinc boinc    592396 Jan  9 10:30 input.tar.gz
[2026-01-09 13:09:20] -rw-r--r--. 1 boinc boinc         0 Jan  9 10:30 boinc_lockfile
[2026-01-09 13:09:20] -rw-r--r--. 1 boinc boinc      2519 Jan  9 10:30 pandaJob.out
[2026-01-09 13:09:20] -rw-------. 1 boinc boinc    989751 Jan  9 10:30 agis_schedconf.cvmfs.json
[2026-01-09 13:09:20] -rw-------. 1 boinc boinc   1516240 Jan  9 10:30 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:09:20] drwx------. 5 boinc boinc      4096 Jan  9 10:30 pilot3
[2026-01-09 13:09:20] -rw-------. 1 boinc boinc 213204395 Jan  9 13:07 HITS.47898826._036146.pool.root.1
[2026-01-09 13:09:20] -rw-r--r--. 1 boinc boinc       530 Jan  9 13:08 boinc_task_state.xml
[2026-01-09 13:09:20] -rw-------. 1 boinc boinc      1011 Jan  9 13:08 memory_monitor_summary.json
[2026-01-09 13:09:20] -rw-------. 1 boinc boinc    399721 Jan  9 13:08 log.47898826._036146.job.log.tgz.1
[2026-01-09 13:09:20] -rw-------. 1 boinc boinc      7771 Jan  9 13:08 heartbeat.json
[2026-01-09 13:09:20] -rw-r--r--. 1 boinc boinc      8192 Jan  9 13:08 boinc_mmap_file
[2026-01-09 13:09:20] -rw-r--r--. 1 boinc boinc        27 Jan  9 13:08 wrapper_checkpoint.txt
[2026-01-09 13:09:20] -rw-------. 1 boinc boinc        95 Jan  9 13:08 pilot_heartbeat.json
[2026-01-09 13:09:20] -rw-------. 1 boinc boinc      4996 Jan  9 13:09 pilotlog.txt
[2026-01-09 13:09:20] -rw-------. 1 boinc boinc   1266643 Jan  9 13:09 log.47898826._036146.job.log.1
[2026-01-09 13:09:20] -rw-------. 1 boinc boinc       357 Jan  9 13:09 output.list
[2026-01-09 13:09:20] -rw-r--r--. 1 boinc boinc       620 Jan  9 13:09 runtime_log
[2026-01-09 13:09:20] -rw-------. 1 boinc boinc   1689600 Jan  9 13:09 result.tar.gz
[2026-01-09 13:09:20] -rw-------. 1 boinc boinc       652 Jan  9 13:09 rzJLDmB0Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIslKDm05YbQo.diag
[2026-01-09 13:09:20] -rw-r--r--. 1 boinc boinc      8832 Jan  9 13:09 runtime_log.err
[2026-01-09 13:09:20] -rw-r--r--. 1 boinc boinc     20783 Jan  9 13:09 stderr.txt
[2026-01-09 13:09:20] HITS file was successfully produced:
[2026-01-09 13:09:20] -rw-------. 1 boinc boinc 213204395 Jan  9 13:07 shared/HITS.pool.root.1
[2026-01-09 13:09:20]  *** Contents of shared directory: ***
[2026-01-09 13:09:20] total 427600
[2026-01-09 13:09:20] -rw-r--r--. 2 boinc boinc 222352661 Jan  9 10:30 ATLAS.root_0
[2026-01-09 13:09:20] -rw-r--r--. 2 boinc boinc     15847 Jan  9 10:30 start_atlas.sh
[2026-01-09 13:09:20] -rw-r--r--. 2 boinc boinc    592396 Jan  9 10:30 input.tar.gz
[2026-01-09 13:09:20] -rw-------. 1 boinc boinc 213204395 Jan  9 13:07 HITS.pool.root.1
[2026-01-09 13:09:20] -rw-------. 1 boinc boinc   1689600 Jan  9 13:09 result.tar.gz
13:09:21 (9769): run_atlas exited; CPU time 71525.359018
13:09:21 (9769): called boinc_finish(0)

</stderr_txt>
]]>

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