Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:20:31 (92372): wrapper (7.7.26015): starting
22:20:31 (92372): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 22:20:31] Arguments: --nthreads 3
[2026-01-09 22:20:31] Threads: 3
[2026-01-09 22:20:31] Checking for CVMFS
[2026-01-09 22:20:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 22:20:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 22:20:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 22:20:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 22:20:31] 2.9.2.0 3607278 2836 85328 154957 2 56 16010775 36864001 0 130560 0 1733116 99.986 113922 6696 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 22:20:31] CVMFS is ok
[2026-01-09 22:20:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 22:20:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 22:20:31] Further information can be found at the LHC@home message board.
[2026-01-09 22:20:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 22:20:31] Checking for apptainer binary...
[2026-01-09 22:20:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 22:20:31] Running /usr/bin/apptainer --version
[2026-01-09 22:20:31] apptainer version 1.4.1-1.1
[2026-01-09 22:20:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 22:20:31] thA312
[2026-01-09 22:20:31] apptainer works
[2026-01-09 22:20:31] Set ATHENA_PROC_NUMBER=3
[2026-01-09 22:20:31] Set ATHENA_CORE_NUMBER=3
[2026-01-09 22:20:31] Starting ATLAS job with PandaID=6963167660
[2026-01-09 22:20:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:18:50]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:18:50] 2026-01-09 23:17:59,563 | INFO     | all data control threads have been joined
[2026-01-10 00:18:50] 2026-01-09 23:17:59,624 | INFO     | all job control threads have been joined
[2026-01-10 00:18:50] 2026-01-09 23:17:59,632 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:18:50] 2026-01-09 23:17:59,637 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:18:50] 2026-01-09 23:17:59,794 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:18:50] 2026-01-09 23:18:00,010 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:18:50] 2026-01-09 23:18:00,292 | INFO     | [payload] control thread has finished
[2026-01-10 00:18:50] 2026-01-09 23:18:00,327 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:18:50] 2026-01-09 23:18:00,373 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:18:50] 2026-01-09 23:18:00,461 | INFO     | [job] validate thread has finished
[2026-01-10 00:18:50] 2026-01-09 23:18:00,569 | INFO     | [data] control thread has finished
[2026-01-10 00:18:50] 2026-01-09 23:18:00,615 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:18:50] 2026-01-09 23:18:00,630 | INFO     | [job] control thread has finished
[2026-01-10 00:18:50] 2026-01-09 23:18:00,681 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:18:50] 2026-01-09 23:18:01,643 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:18:50] 2026-01-09 23:18:02,564 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:18:50] 2026-01-09 23:18:09,006 | INFO     | job.realtimelogging is not enabled
[2026-01-10 00:18:50] 2026-01-09 23:18:10,012 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:18:50] 2026-01-09 23:18:28,868 | INFO     | PID=96094 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 00:18:50] 2026-01-09 23:18:28,869 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:18:50] 2026-01-09 23:18:28,869 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:18:50] 2026-01-09 23:18:28,869 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:18:50] 2026-01-09 23:18:45,267 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:18:50] 2026-01-09 23:18:45,554 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140636601808704)>', '<ExcThread(monitor, started 140636254615296)>']
[2026-01-10 00:18:50] 2026-01-09 23:18:45,957 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:18:50] 2026-01-09 23:18:45,957 | INFO     | [monitor] control thread has ended
[2026-01-10 00:18:50] 2026-01-09 23:18:50,580 | INFO     | all workflow threads have been joined
[2026-01-10 00:18:50] 2026-01-09 23:18:50,581 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:18:50] 2026-01-09 23:18:50,581 | INFO     | traces error code: 0
[2026-01-10 00:18:50] 2026-01-09 23:18:50,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:18:50] 2026-01-09 23:18:50,632 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:18:50] 2026-01-09 23:18:50,635 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:18:50] 2026-01-09 23:18:50,637 [wrapper] pilotpid: 96094
[2026-01-10 00:18:50] 2026-01-09 23:18:50,639 [wrapper] Pilot exit status: 0
[2026-01-10 00:18:50] 2026-01-09 23:18:50,646 [wrapper] pandaids: 6963167660
[2026-01-10 00:18:50] 2026-01-09 23:18:50,665 [wrapper] cleanup supervisor_pilot  118231 96095
[2026-01-10 00:18:50] 2026-01-09 23:18:50,667 [wrapper] Test setup, not cleaning
[2026-01-10 00:18:50] 2026-01-09 23:18:50,669 [wrapper] apfmon messages muted
[2026-01-10 00:18:50] 2026-01-09 23:18:50,672 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:18:50] 2026-01-09 23:18:50,674 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:18:50]  *** Error codes and diagnostics ***
[2026-01-10 00:18:50]     "exeErrorCode": 0,
[2026-01-10 00:18:50]     "exeErrorDiag": "",
[2026-01-10 00:18:50]     "pilotErrorCode": 0,
[2026-01-10 00:18:50]     "pilotErrorDiag": "",
[2026-01-10 00:18:50]  *** Listing of results directory ***
[2026-01-10 00:18:50] total 438920
[2026-01-10 00:18:50] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-10 00:18:50] -rwx------ 1 boinc boinc     36322 Jan  9 01:57 runpilot2-wrapper.sh
[2026-01-10 00:18:50] -rw-r--r-- 1 boinc boinc      5112 Jan  9 01:59 queuedata.json
[2026-01-10 00:18:50] -rw-r--r-- 1 boinc boinc       100 Jan  9 22:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:18:50] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 22:20 run_atlas
[2026-01-10 00:18:50] -rw-r--r-- 1 boinc boinc       105 Jan  9 22:20 job.xml
[2026-01-10 00:18:50] -rw-r--r-- 2 boinc boinc 223873151 Jan  9 22:20 EVNT.47898824._001335.pool.root.1
[2026-01-10 00:18:50] -rw-r--r-- 2 boinc boinc    592397 Jan  9 22:20 input.tar.gz
[2026-01-10 00:18:50] -rw-r--r-- 2 boinc boinc     15847 Jan  9 22:20 start_atlas.sh
[2026-01-10 00:18:50] drwxrwx--x 2 boinc boinc      4096 Jan  9 22:20 shared
[2026-01-10 00:18:50] -rw-r--r-- 1 boinc boinc         0 Jan  9 22:20 boinc_setup_complete
[2026-01-10 00:18:50] -rw-r--r-- 1 boinc boinc      6439 Jan  9 22:20 init_data.xml
[2026-01-10 00:18:50] -rw-r--r-- 1 boinc boinc         0 Jan  9 22:20 boinc_lockfile
[2026-01-10 00:18:50] -rw-r--r-- 1 boinc boinc      2519 Jan  9 22:20 pandaJob.out
[2026-01-10 00:18:50] -rw------- 1 boinc boinc    989398 Jan  9 22:20 agis_schedconf.cvmfs.json
[2026-01-10 00:18:50] -rw------- 1 boinc boinc   1516240 Jan  9 22:20 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:18:50] drwx------ 5 boinc boinc      4096 Jan  9 22:20 pilot3
[2026-01-10 00:18:50] -rw------- 1 boinc boinc 219117481 Jan 10 00:17 HITS.47898826._035901.pool.root.1
[2026-01-10 00:18:50] -rw-r--r-- 1 boinc boinc       529 Jan 10 00:17 boinc_task_state.xml
[2026-01-10 00:18:50] -rw------- 1 boinc boinc      1037 Jan 10 00:17 memory_monitor_summary.json
[2026-01-10 00:18:50] -rw------- 1 boinc boinc    270796 Jan 10 00:17 log.47898826._035901.job.log.tgz.1
[2026-01-10 00:18:50] -rw------- 1 boinc boinc      7768 Jan 10 00:17 heartbeat.json
[2026-01-10 00:18:50] -rw-r--r-- 1 boinc boinc      8192 Jan 10 00:18 boinc_mmap_file
[2026-01-10 00:18:50] -rw-r--r-- 1 boinc boinc        27 Jan 10 00:18 wrapper_checkpoint.txt
[2026-01-10 00:18:50] -rw------- 1 boinc boinc        95 Jan 10 00:18 pilot_heartbeat.json
[2026-01-10 00:18:50] -rw------- 1 boinc boinc      4822 Jan 10 00:18 pilotlog.txt
[2026-01-10 00:18:50] -rw------- 1 boinc boinc   1011638 Jan 10 00:18 log.47898826._035901.job.log.1
[2026-01-10 00:18:50] -rw------- 1 boinc boinc       357 Jan 10 00:18 output.list
[2026-01-10 00:18:50] -rw-r--r-- 1 boinc boinc       620 Jan 10 00:18 runtime_log
[2026-01-10 00:18:50] -rw------- 1 boinc boinc   1300480 Jan 10 00:18 result.tar.gz
[2026-01-10 00:18:50] -rw-r--r-- 1 boinc boinc      8897 Jan 10 00:18 runtime_log.err
[2026-01-10 00:18:50] -rw------- 1 boinc boinc       659 Jan 10 00:18 gZmMDmzzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyqlKDmac3xXn.diag
[2026-01-10 00:18:50] -rw-r--r-- 1 boinc boinc      6522 Jan 10 00:18 stderr.txt
[2026-01-10 00:18:50] HITS file was successfully produced:
[2026-01-10 00:18:50] -rw------- 1 boinc boinc 219117481 Jan 10 00:17 shared/HITS.pool.root.1
[2026-01-10 00:18:50]  *** Contents of shared directory: ***
[2026-01-10 00:18:50] total 434488
[2026-01-10 00:18:50] -rw-r--r-- 2 boinc boinc 223873151 Jan  9 22:20 ATLAS.root_0
[2026-01-10 00:18:50] -rw-r--r-- 2 boinc boinc    592397 Jan  9 22:20 input.tar.gz
[2026-01-10 00:18:50] -rw-r--r-- 2 boinc boinc     15847 Jan  9 22:20 start_atlas.sh
[2026-01-10 00:18:50] -rw------- 1 boinc boinc 219117481 Jan 10 00:17 HITS.pool.root.1
[2026-01-10 00:18:50] -rw------- 1 boinc boinc   1300480 Jan 10 00:18 result.tar.gz
00:18:51 (92372): run_atlas exited; CPU time 20435.180591
00:18:51 (92372): called boinc_finish(0)

</stderr_txt>
]]>

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