Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:40:32 (2553084): wrapper (7.7.26015): starting
17:40:32 (2553084): wrapper: running run_atlas (--nthreads 3)
[2026-01-11 17:40:32] Arguments: --nthreads 3
[2026-01-11 17:40:32] Threads: 3
[2026-01-11 17:40:32] Checking for CVMFS
[2026-01-11 17:40:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 17:40:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 17:40:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 17:40:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 17:40:33] 2.12.7.0 2907148 5821 57272 155023 1 57 4146257 6144001 2751 130560 1 8816903 99.972 331650 1473 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2026-01-11 17:40:33] CVMFS is ok
[2026-01-11 17:40:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 17:40:33] Checking for apptainer binary...
[2026-01-11 17:40:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 17:40:33] Running /usr/bin/apptainer --version
[2026-01-11 17:40:33] apptainer version 1.4.5
[2026-01-11 17:40:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 17:40:33] Ryzen3
[2026-01-11 17:40:33] apptainer works
[2026-01-11 17:40:33] Set ATHENA_PROC_NUMBER=3
[2026-01-11 17:40:33] Set ATHENA_CORE_NUMBER=3
[2026-01-11 17:40:33] Starting ATLAS job with PandaID=6963167621
[2026-01-11 17:40:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 21:31:08]  *** The last 200 lines of the pilot log: ***
[2026-01-11 21:31:08] 2026-01-11 20:30:09,502 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 21:31:08] 2026-01-11 20:30:09,870 | INFO     | time since job start (13769s) is within the limit (349056.0s)
[2026-01-11 21:31:08] 2026-01-11 20:30:10,255 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 21:31:08] 2026-01-11 20:30:10,256 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3942.123666666667
[2026-01-11 21:31:08] 2026-01-11 20:30:10,258 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6963167621/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 21:31:08] 2026-01-11 20:30:10,259 | INFO     | extracted standard info from prmon json
[2026-01-11 21:31:08] 2026-01-11 20:30:10,259 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 21:31:08] 2026-01-11 20:30:10,259 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 21:31:08] 2026-01-11 20:30:10,259 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 21:31:08] 2026-01-11 20:30:10,259 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 21:31:08] 2026-01-11 20:30:10,262 | INFO     | fitting pss+swap vs Time
[2026-01-11 21:31:08] 2026-01-11 20:30:10,262 | INFO     | sum of square deviations: 3579276412.5
[2026-01-11 21:31:08] 2026-01-11 20:30:10,263 | INFO     | sum of deviations: -68123471145.500015
[2026-01-11 21:31:08] 2026-01-11 20:30:10,263 | INFO     | mean x: 1768156524.5
[2026-01-11 21:31:08] 2026-01-11 20:30:10,263 | INFO     | mean y: 2347815.2522123894
[2026-01-11 21:31:08] 2026-01-11 20:30:10,263 | INFO     | intersect: 33655227921.645317
[2026-01-11 21:31:08] 2026-01-11 20:30:10,264 | INFO     | chi2: 2.1683193769458216
[2026-01-11 21:31:08] 2026-01-11 20:30:10,264 | INFO     | sum of square deviations: 3346927870.0
[2026-01-11 21:31:08] 2026-01-11 20:30:10,265 | INFO     | sum of deviations: -53849231568.0
[2026-01-11 21:31:08] 2026-01-11 20:30:10,265 | INFO     | mean x: 1768156372.0
[2026-01-11 21:31:08] 2026-01-11 20:30:10,265 | INFO     | mean y: 2357033.271493213
[2026-01-11 21:31:08] 2026-01-11 20:30:10,265 | INFO     | intersect: 28450493838.87966
[2026-01-11 21:31:08] 2026-01-11 20:30:10,265 | INFO     | chi2: 1.506343583245224
[2026-01-11 21:31:08] 2026-01-11 20:30:10,265 | INFO     | current chi2=1.506343583245224 (change=30.529441406967507 %)
[2026-01-11 21:31:08] 2026-01-11 20:30:10,266 | INFO     | sum of square deviations: 3124858590.0
[2026-01-11 21:31:08] 2026-01-11 20:30:10,267 | INFO     | sum of deviations: -52623010970.99999
[2026-01-11 21:31:08] 2026-01-11 20:30:10,267 | INFO     | mean x: 1768156219.5
[2026-01-11 21:31:08] 2026-01-11 20:30:10,267 | INFO     | mean y: 2357875.7685185187
[2026-01-11 21:31:08] 2026-01-11 20:30:10,267 | INFO     | intersect: 29778330598.166298
[2026-01-11 21:31:08] 2026-01-11 20:30:10,267 | INFO     | chi2: 1.498300254467396
[2026-01-11 21:31:08] 2026-01-11 20:30:10,267 | INFO     | current chi2=1.498300254467396 (change=0.5339637561637681 %)
[2026-01-11 21:31:08] 2026-01-11 20:30:10,267 | INFO     | right removable region: 215
[2026-01-11 21:31:08] 2026-01-11 20:30:10,268 | INFO     | sum of square deviations: 3346927870.0
[2026-01-11 21:31:08] 2026-01-11 20:30:10,269 | INFO     | sum of deviations: -81317389559.99998
[2026-01-11 21:31:08] 2026-01-11 20:30:10,269 | INFO     | mean x: 1768156677.0
[2026-01-11 21:31:08] 2026-01-11 20:30:10,269 | INFO     | mean y: 2356246.7239819006
[2026-01-11 21:31:08] 2026-01-11 20:30:10,269 | INFO     | intersect: 42961718052.96574
[2026-01-11 21:31:08] 2026-01-11 20:30:10,269 | INFO     | chi2: 1.1331163349651527
[2026-01-11 21:31:08] 2026-01-11 20:30:10,269 | INFO     | current chi2=1.1331163349651527 (change=47.742184707070244 %)
[2026-01-11 21:31:08] 2026-01-11 20:30:10,269 | INFO     | sum of square deviations: 3124858590.0
[2026-01-11 21:31:08] 2026-01-11 20:30:10,270 | INFO     | sum of deviations: -70508496176.5
[2026-01-11 21:31:08] 2026-01-11 20:30:10,270 | INFO     | mean x: 1768156829.5
[2026-01-11 21:31:08] 2026-01-11 20:30:10,271 | INFO     | mean y: 2348819.921296296
[2026-01-11 21:31:08] 2026-01-11 20:30:10,271 | INFO     | intersect: 39898579468.954636
[2026-01-11 21:31:08] 2026-01-11 20:30:10,271 | INFO     | chi2: 1.1073403645930606
[2026-01-11 21:31:08] 2026-01-11 20:30:10,271 | INFO     | current chi2=1.1073403645930606 (change=2.2747858782641956 %)
[2026-01-11 21:31:08] 2026-01-11 20:30:10,271 | INFO     | left removable region: 20
[2026-01-11 21:31:08] 2026-01-11 20:30:10,271 | INFO     | sum of square deviations: 2299168690.0
[2026-01-11 21:31:08] 2026-01-11 20:30:10,272 | INFO     | sum of deviations: -34285118381.000004
[2026-01-11 21:31:08] 2026-01-11 20:30:10,272 | INFO     | mean x: 1768156799.0
[2026-01-11 21:31:08] 2026-01-11 20:30:10,272 | INFO     | mean y: 2342332.3384615383
[2026-01-11 21:31:08] 2026-01-11 20:30:10,272 | INFO     | intersect: 26369031054.898018
[2026-01-11 21:31:08] 2026-01-11 20:30:10,272 | INFO     | chi2: 0.33681453278648815
[2026-01-11 21:31:08] 2026-01-11 20:30:10,273 | INFO     | current memory leak: -14.91 B/s (using 195 data points, chi2=0.34)
[2026-01-11 21:31:08] 2026-01-11 20:30:10,273 | INFO     | could have reported an average CPU frequency of 3939 MHz (11 samples)
[2026-01-11 21:31:08] 2026-01-11 20:30:10,273 | INFO     | ..............................
[2026-01-11 21:31:08] 2026-01-11 20:30:10,273 | INFO     | . Timing measurements:
[2026-01-11 21:31:08] 2026-01-11 20:30:10,273 | INFO     | . get job = 0 s
[2026-01-11 21:31:08] 2026-01-11 20:30:10,273 | INFO     | . initial setup = 1 s
[2026-01-11 21:31:08] 2026-01-11 20:30:10,273 | INFO     | . payload setup = 3 s
[2026-01-11 21:31:08] 2026-01-11 20:30:10,273 | INFO     | . stage-in = 0 s
[2026-01-11 21:31:08] 2026-01-11 20:30:10,273 | INFO     | . payload execution = 13744 s
[2026-01-11 21:31:08] 2026-01-11 20:30:10,273 | INFO     | . stage-out = 0 s
[2026-01-11 21:31:08] 2026-01-11 20:30:10,273 | INFO     | . log creation = 0 s
[2026-01-11 21:31:08] 2026-01-11 20:30:10,273 | INFO     | ..............................
[2026-01-11 21:31:08] 2026-01-11 20:30:10,339 | INFO     | 
[2026-01-11 21:31:08] 2026-01-11 20:30:10,339 | INFO     | job summary report
[2026-01-11 21:31:08] 2026-01-11 20:30:10,339 | INFO     | --------------------------------------------------
[2026-01-11 21:31:08] 2026-01-11 20:30:10,339 | INFO     | PanDA job id: 6963167621
[2026-01-11 21:31:08] 2026-01-11 20:30:10,339 | INFO     | task id: 47898826
[2026-01-11 21:31:08] 2026-01-11 20:30:10,339 | INFO     | errors: (none)
[2026-01-11 21:31:08] 2026-01-11 20:30:10,339 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 21:31:08] 2026-01-11 20:30:10,339 | INFO     | pilot state: finished 
[2026-01-11 21:31:08] 2026-01-11 20:30:10,340 | INFO     | transexitcode: 0
[2026-01-11 21:31:08] 2026-01-11 20:30:10,340 | INFO     | exeerrorcode: 0
[2026-01-11 21:31:08] 2026-01-11 20:30:10,340 | INFO     | exeerrordiag: 
[2026-01-11 21:31:08] 2026-01-11 20:30:10,340 | INFO     | exitcode: 0
[2026-01-11 21:31:08] 2026-01-11 20:30:10,340 | INFO     | exitmsg: OK
[2026-01-11 21:31:08] 2026-01-11 20:30:10,340 | INFO     | cpuconsumptiontime: 40223 s
[2026-01-11 21:31:08] 2026-01-11 20:30:10,340 | INFO     | nevents: 400
[2026-01-11 21:31:08] 2026-01-11 20:30:10,340 | INFO     | neventsw: 0
[2026-01-11 21:31:08] 2026-01-11 20:30:10,340 | INFO     | pid: 2563241
[2026-01-11 21:31:08] 2026-01-11 20:30:10,340 | INFO     | pgrp: 2563241
[2026-01-11 21:31:08] 2026-01-11 20:30:10,340 | INFO     | corecount: 3
[2026-01-11 21:31:08] 2026-01-11 20:30:10,340 | INFO     | event service: False
[2026-01-11 21:31:08] 2026-01-11 20:30:10,340 | INFO     | sizes: {0: 2283970, 3: 2284232, 11: 2284260, 13752: 2314772, 13754: 2323826, 13757: 2323964}
[2026-01-11 21:31:08] 2026-01-11 20:30:10,340 | INFO     | --------------------------------------------------
[2026-01-11 21:31:08] 2026-01-11 20:30:10,340 | INFO     | 
[2026-01-11 21:31:08] 2026-01-11 20:30:10,340 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-11 21:31:08] 2026-01-11 20:30:10,355 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,355 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,355 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,356 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 21:31:08] 2026-01-11 20:30:10,357 | INFO     | job 6963167621 has completed (purged errors)
[2026-01-11 21:31:08] 2026-01-11 20:30:10,357 | INFO     | overall cleanup function is called
[2026-01-11 21:31:08] 2026-01-11 20:30:11,364 | INFO     | --- collectZombieJob: --- 10, [2563241]
[2026-01-11 21:31:08] 2026-01-11 20:30:11,364 | INFO     | zombie collector waiting for pid 2563241
[2026-01-11 21:31:08] 2026-01-11 20:30:11,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 21:31:08] 2026-01-11 20:30:11,364 | INFO     | collected zombie processes
[2026-01-11 21:31:08] 2026-01-11 20:30:11,364 | INFO     | will attempt to kill all subprocesses of pid=2563241
[2026-01-11 21:31:08] 2026-01-11 20:30:11,441 | INFO     | process IDs to be killed: [2563241] (in reverse order)
[2026-01-11 21:31:08] 2026-01-11 20:30:11,479 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 21:31:08] 2026-01-11 20:30:11,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 21:31:08] 2026-01-11 20:30:11,482 | INFO     | did not find any defunct processes belonging to 2563241
[2026-01-11 21:31:08] 2026-01-11 20:30:11,484 | INFO     | did not find any defunct processes belonging to 2563241
[2026-01-11 21:31:08] 2026-01-11 20:30:11,484 | INFO     | ready for new job
[2026-01-11 21:31:08] 2026-01-11 20:30:11,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 21:31:08] 2026-01-11 20:30:11,485 | INFO     | ***************************************
[2026-01-11 21:31:08] 2026-01-11 20:30:11,486 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 21:31:08] 2026-01-11 20:30:11,486 | INFO     | ***************************************
[2026-01-11 21:31:08] 2026-01-11 20:30:11,486 | INFO     | 
[2026-01-11 21:31:08] 2026-01-11 20:30:11,486 | INFO     | architecture information:
[2026-01-11 21:31:08] 2026-01-11 20:30:11,487 | INFO     | executing command: cat /etc/os-release
[2026-01-11 21:31:08] 2026-01-11 20:30:11,500 | INFO     | cat /etc/os-release:
[2026-01-11 21:31:08] NAME="CentOS Linux"
[2026-01-11 21:31:08] VERSION="7 (Core)"
[2026-01-11 21:31:08] ID="centos"
[2026-01-11 21:31:08] ID_LIKE="rhel fedora"
[2026-01-11 21:31:08] VERSION_ID="7"
[2026-01-11 21:31:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 21:31:08] ANSI_COLOR="0;31"
[2026-01-11 21:31:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 21:31:08] HOME_URL="https://www.centos.org/"
[2026-01-11 21:31:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 21:31:08] 
[2026-01-11 21:31:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 21:31:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 21:31:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 21:31:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 21:31:08] 
[2026-01-11 21:31:08] 2026-01-11 20:30:11,500 | INFO     | ***************************************
[2026-01-11 21:31:08] 2026-01-11 20:30:12,002 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-11 21:31:08] 2026-01-11 20:30:12,015 | INFO     | sufficient remaining disk space (238181941248 B)
[2026-01-11 21:31:08] 2026-01-11 20:30:12,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 21:31:08] 2026-01-11 20:30:12,015 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 21:31:08] 2026-01-11 20:30:12,015 | INFO     | update_server=False
[2026-01-11 21:31:08] 2026-01-11 20:30:12,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 21:31:08] 2026-01-11 20:30:12,015 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 21:31:08] 2026-01-11 20:30:12,121 | INFO     | all payload control threads have been joined
[2026-01-11 21:31:08] 2026-01-11 20:30:12,333 | INFO     | all job control threads have been joined
[2026-01-11 21:31:08] 2026-01-11 20:30:13,012 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 21:31:08] 2026-01-11 20:30:13,012 | INFO     | aborting loop
[2026-01-11 21:31:08] 2026-01-11 20:30:13,020 | INFO     | [job] retrieve thread has finished
[2026-01-11 21:31:08] 2026-01-11 20:30:13,021 | INFO     | [job] queue monitor thread has finished
[2026-01-11 21:31:08] 2026-01-11 20:30:13,088 | INFO     | all data control threads have been joined
[2026-01-11 21:31:08] 2026-01-11 20:30:13,128 | INFO     | [payload] control thread has finished
[2026-01-11 21:31:08] 2026-01-11 20:30:13,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 21:31:08] 2026-01-11 20:30:13,338 | INFO     | [job] control thread has finished
[2026-01-11 21:31:08] 2026-01-11 20:30:13,338 | INFO     | [payload] failed_post thread has finished
[2026-01-11 21:31:08] 2026-01-11 20:30:13,438 | INFO     | [job] validate thread has finished
[2026-01-11 21:31:08] 2026-01-11 20:30:13,569 | INFO     | [data] copytool_in thread has finished
[2026-01-11 21:31:08] 2026-01-11 20:30:13,710 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 21:31:08] 2026-01-11 20:30:13,792 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 21:31:08] 2026-01-11 20:30:13,948 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 21:31:08] 2026-01-11 20:30:13,982 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 21:31:08] 2026-01-11 20:30:14,017 | INFO     | [job] job monitor thread has finished
[2026-01-11 21:31:08] 2026-01-11 20:30:14,092 | INFO     | [data] control thread has finished
[2026-01-11 21:31:08] 2026-01-11 20:30:14,388 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 21:31:08] 2026-01-11 20:30:14,555 | INFO     | [payload] validate_post thread has finished
[2026-01-11 21:31:08] 2026-01-11 20:30:15,236 | INFO     | [data] copytool_out thread has finished
[2026-01-11 21:31:08] 2026-01-11 20:30:17,797 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 21:31:08] 2026-01-11 20:30:43,043 | INFO     | PID=2556797 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 21:31:08] 2026-01-11 20:30:43,043 | INFO     | .. there are 4 such processes running
[2026-01-11 21:31:08] 2026-01-11 20:30:43,043 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 21:31:08] 2026-01-11 20:30:43,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 21:31:08] 2026-01-11 20:30:43,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 21:31:08] 2026-01-11 20:31:02,605 | INFO     | [monitor] cgroup control has ended
[2026-01-11 21:31:08] 2026-01-11 20:31:03,795 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140612575807296)>', '<ExcThread(monitor, started 140612212856576)>']
[2026-01-11 21:31:08] 2026-01-11 20:31:04,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 21:31:08] 2026-01-11 20:31:04,137 | INFO     | [monitor] control thread has ended
[2026-01-11 21:31:08] 2026-01-11 20:31:08,820 | INFO     | all workflow threads have been joined
[2026-01-11 21:31:08] 2026-01-11 20:31:08,820 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 21:31:08] 2026-01-11 20:31:08,820 | INFO     | traces error code: 0
[2026-01-11 21:31:08] 2026-01-11 20:31:08,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 21:31:08] 2026-01-11 20:31:08,901 [wrapper] ==== pilot stdout END ====
[2026-01-11 21:31:08] 2026-01-11 20:31:08,903 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 21:31:08] 2026-01-11 20:31:08,905 [wrapper] pilotpid: 2556797
[2026-01-11 21:31:08] 2026-01-11 20:31:08,907 [wrapper] Pilot exit status: 0
[2026-01-11 21:31:08] 2026-01-11 20:31:08,914 [wrapper] pandaids: 6963167621
[2026-01-11 21:31:08] 2026-01-11 20:31:08,944 [wrapper] cleanup supervisor_pilot 2716418 2556798
[2026-01-11 21:31:08] 2026-01-11 20:31:08,946 [wrapper] Test setup, not cleaning
[2026-01-11 21:31:08] 2026-01-11 20:31:08,948 [wrapper] apfmon messages muted
[2026-01-11 21:31:08] 2026-01-11 20:31:08,949 [wrapper] ==== wrapper stdout END ====
[2026-01-11 21:31:08] 2026-01-11 20:31:08,951 [wrapper] ==== wrapper stderr END ====
[2026-01-11 21:31:08]  *** Error codes and diagnostics ***
[2026-01-11 21:31:08]     "exeErrorCode": 0,
[2026-01-11 21:31:08]     "exeErrorDiag": "",
[2026-01-11 21:31:08]     "pilotErrorCode": 0,
[2026-01-11 21:31:08]     "pilotErrorDiag": "",
[2026-01-11 21:31:08]  *** Listing of results directory ***
[2026-01-11 21:31:09] insgesamt 446876
[2026-01-11 21:31:09] -rw-r--r-- 1 boinc boinc    579449  9. Jan 01:57 pilot3.tar.gz
[2026-01-11 21:31:09] -rwx------ 1 boinc boinc     36322  9. Jan 01:57 runpilot2-wrapper.sh
[2026-01-11 21:31:09] -rw-r--r-- 1 boinc boinc      5112  9. Jan 01:59 queuedata.json
[2026-01-11 21:31:09] -rw-r--r-- 1 boinc boinc       100 11. Jan 17:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 21:31:09] -rwxr-xr-x 1 boinc boinc      7986 11. Jan 17:40 run_atlas
[2026-01-11 21:31:09] -rw-r--r-- 1 boinc boinc       105 11. Jan 17:40 job.xml
[2026-01-11 21:31:09] -rw-r--r-- 1 boinc boinc      6914 11. Jan 17:40 init_data.xml
[2026-01-11 21:31:09] -rw-r--r-- 2 boinc boinc 224489145 11. Jan 17:40 EVNT.47898824._001333.pool.root.1
[2026-01-11 21:31:09] drwxrwx--x 2 boinc boinc      4096 11. Jan 17:40 shared
[2026-01-11 21:31:09] -rw-r--r-- 2 boinc boinc    592399 11. Jan 17:40 input.tar.gz
[2026-01-11 21:31:09] -rw-r--r-- 2 boinc boinc     15847 11. Jan 17:40 start_atlas.sh
[2026-01-11 21:31:09] -rw-r--r-- 1 boinc boinc         0 11. Jan 17:40 boinc_lockfile
[2026-01-11 21:31:09] -rw-r--r-- 1 boinc boinc      2519 11. Jan 17:40 pandaJob.out
[2026-01-11 21:31:09] -rw------- 1 boinc boinc        52 11. Jan 17:40 setup.sh.local
[2026-01-11 21:31:09] -rw------- 1 boinc boinc    989556 11. Jan 17:40 agis_schedconf.cvmfs.json
[2026-01-11 21:31:09] drwx------ 5 boinc boinc      4096 11. Jan 17:40 pilot3
[2026-01-11 21:31:09] -rw------- 1 boinc boinc 224487223 11. Jan 21:29 HITS.47898826._035862.pool.root.1
[2026-01-11 21:31:09] -rw------- 1 boinc boinc        95 11. Jan 21:29 pilot_heartbeat.json
[2026-01-11 21:31:09] -rw-r--r-- 1 boinc boinc       530 11. Jan 21:30 boinc_task_state.xml
[2026-01-11 21:31:09] -rw------- 1 boinc boinc      1012 11. Jan 21:30 memory_monitor_summary.json
[2026-01-11 21:31:09] -rw------- 1 boinc boinc   1516240 11. Jan 21:30 agis_ddmendpoints.agis.ALL.json
[2026-01-11 21:31:09] -rw------- 1 boinc boinc    378860 11. Jan 21:30 log.47898826._035862.job.log.tgz.1
[2026-01-11 21:31:09] -rw------- 1 boinc boinc      7726 11. Jan 21:30 heartbeat.json
[2026-01-11 21:31:09] -rw-r--r-- 1 boinc boinc      8192 11. Jan 21:31 boinc_mmap_file
[2026-01-11 21:31:09] -rw-r--r-- 1 boinc boinc        28 11. Jan 21:31 wrapper_checkpoint.txt
[2026-01-11 21:31:09] -rw------- 1 boinc boinc      4824 11. Jan 21:31 pilotlog.txt
[2026-01-11 21:31:09] -rw------- 1 boinc boinc   1973262 11. Jan 21:31 log.47898826._035862.job.log.1
[2026-01-11 21:31:09] -rw------- 1 boinc boinc       357 11. Jan 21:31 output.list
[2026-01-11 21:31:09] -rw-r--r-- 1 boinc boinc       620 11. Jan 21:31 runtime_log
[2026-01-11 21:31:09] -rw------- 1 boinc boinc   2375680 11. Jan 21:31 result.tar.gz
[2026-01-11 21:31:09] -rw------- 1 boinc boinc       646 11. Jan 21:31 vomMDmpzFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGcgKDmyxnDJm.diag
[2026-01-11 21:31:09] -rw-r--r-- 1 boinc boinc      9270 11. Jan 21:31 runtime_log.err
[2026-01-11 21:31:09] -rw-r--r-- 1 boinc boinc     20769 11. Jan 21:31 stderr.txt
[2026-01-11 21:31:09] HITS file was successfully produced:
[2026-01-11 21:31:09] -rw------- 1 boinc boinc 224487223 11. Jan 21:29 shared/HITS.pool.root.1
[2026-01-11 21:31:09]  *** Contents of shared directory: ***
[2026-01-11 21:31:09] insgesamt 441380
[2026-01-11 21:31:09] -rw-r--r-- 2 boinc boinc 224489145 11. Jan 17:40 ATLAS.root_0
[2026-01-11 21:31:09] -rw-r--r-- 2 boinc boinc    592399 11. Jan 17:40 input.tar.gz
[2026-01-11 21:31:09] -rw-r--r-- 2 boinc boinc     15847 11. Jan 17:40 start_atlas.sh
[2026-01-11 21:31:09] -rw------- 1 boinc boinc 224487223 11. Jan 21:29 HITS.pool.root.1
[2026-01-11 21:31:09] -rw------- 1 boinc boinc   2375680 11. Jan 21:31 result.tar.gz
21:31:10 (2553084): run_atlas exited; CPU time 40345.148312
21:31:10 (2553084): called boinc_finish(0)

</stderr_txt>
]]>

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