Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:14:09 (27006): wrapper (7.7.26015): starting
01:14:09 (27006): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 01:14:09] Arguments: --nthreads 12
[2026-01-09 01:14:09] Threads: 12
[2026-01-09 01:14:09] Checking for CVMFS
[2026-01-09 01:14:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 01:14:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 01:14:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 01:14:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 01:14:10] 2.11.2.0 2933 350668 94436 154933 3 59 13030775 20275201 1 130560 2 148062961 99.944 21727953 17067 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 01:14:10] CVMFS is ok
[2026-01-09 01:14:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 01:14:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 01:14:10] Further information can be found at the LHC@home message board.
[2026-01-09 01:14:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 01:14:10] Checking for apptainer binary...
[2026-01-09 01:14:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 01:14:10] Running /usr/bin/apptainer --version
[2026-01-09 01:14:10] apptainer version 1.3.2-1.el7
[2026-01-09 01:14:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 01:14:11] c-205-15.aglt2.org
[2026-01-09 01:14:11] apptainer works
[2026-01-09 01:14:11] Set ATHENA_PROC_NUMBER=12
[2026-01-09 01:14:11] Set ATHENA_CORE_NUMBER=12
[2026-01-09 01:14:11] Starting ATLAS job with PandaID=6963167257
[2026-01-09 01:14:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 02:53:56]  *** The last 200 lines of the pilot log: ***
[2026-01-09 02:53:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 02:53:56]  replicas=None
[2026-01-09 02:53:56]  scope=mc23_13p6TeV
[2026-01-09 02:53:56]  status=None
[2026-01-09 02:53:56]  status_code=0
[2026-01-09 02:53:56]  storage_token=
[2026-01-09 02:53:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963167257/log.47898826._035632.job.log.tgz.1
[2026-01-09 02:53:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/88/log.47898826._035632.job.log.tgz.1
[2026-01-09 02:53:56]  workdir=None
[2026-01-09 02:53:56] ]
[2026-01-09 02:53:56] 2026-01-09 07:53:16,541 | INFO     | transferring file log.47898826._035632.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963167257/log.47898826._035632.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 02:53:56] 2026-01-09 07:53:16,541 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963167257/log.47898826._035632.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._035632.job
[2026-01-09 02:53:56] 2026-01-09 07:53:16,564 | INFO     | adding to output.list: log.47898826._035632.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/88/log.47898826._035632.job.log.tg
[2026-01-09 02:53:56] 2026-01-09 07:53:16,565 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 02:53:56] 2026-01-09 07:53:16,565 | INFO     | summary of transferred files:
[2026-01-09 02:53:56] 2026-01-09 07:53:16,565 | INFO     |  -- lfn=log.47898826._035632.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 02:53:56] 2026-01-09 07:53:16,566 | INFO     | stage-out finished correctly
[2026-01-09 02:53:56] 2026-01-09 07:53:16,883 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 02:53:56] 2026-01-09 07:53:16,944 | INFO     | time since job start (5928s) is within the limit (349056.0s)
[2026-01-09 02:53:56] 2026-01-09 07:53:17,188 | INFO     | monitor loop #437: job 0:6963167257 is in state 'finished'
[2026-01-09 02:53:56] 2026-01-09 07:53:17,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:53:56] 2026-01-09 07:53:18,948 | INFO     | time since job start (5930s) is within the limit (349056.0s)
[2026-01-09 02:53:56] 2026-01-09 07:53:19,223 | INFO     | job 6963167257 has state=finished
[2026-01-09 02:53:56] 2026-01-09 07:53:19,223 | INFO     | preparing for final server update for job 6963167257 in state='finished'
[2026-01-09 02:53:56] 2026-01-09 07:53:19,224 | INFO     | this job has now completed (state=finished)
[2026-01-09 02:53:56] 2026-01-09 07:53:19,224 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 02:53:56] 2026-01-09 07:53:19,224 | INFO     | log transfer has been attempted: DONE
[2026-01-09 02:53:56] 2026-01-09 07:53:19,224 | INFO     | job 6963167257 has finished - writing final server update
[2026-01-09 02:53:56] 2026-01-09 07:53:19,225 | INFO     | total number of processed events: 400 (read)
[2026-01-09 02:53:56] 2026-01-09 07:53:19,225 | INFO     | executing command: lscpu
[2026-01-09 02:53:56] 2026-01-09 07:53:19,250 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 02:53:56] 2026-01-09 07:53:19,691 | INFO     | monitor loop #438: job 0:6963167257 is in state 'finished'
[2026-01-09 02:53:56] 2026-01-09 07:53:19,692 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:53:56] 2026-01-09 07:53:20,953 | INFO     | time since job start (5932s) is within the limit (349056.0s)
[2026-01-09 02:53:56] 2026-01-09 07:53:22,071 | INFO     | PID=31049 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 02:53:56] 2026-01-09 07:53:22,195 | INFO     | monitor loop #439: job 0:6963167257 is in state 'finished'
[2026-01-09 02:53:56] 2026-01-09 07:53:22,195 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:53:56] 2026-01-09 07:53:23,072 | INFO     | time since job start (5935s) is within the limit (349056.0s)
[2026-01-09 02:53:56] 2026-01-09 07:53:23,970 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 02:53:56] 2026-01-09 07:53:23,974 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1751.25
[2026-01-09 02:53:56] 2026-01-09 07:53:23,976 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963167257/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 02:53:56] 2026-01-09 07:53:23,976 | INFO     | extracted standard info from prmon json
[2026-01-09 02:53:56] 2026-01-09 07:53:23,976 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 02:53:56] 2026-01-09 07:53:23,977 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 02:53:56] 2026-01-09 07:53:23,977 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 02:53:56] 2026-01-09 07:53:23,977 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 02:53:56] 2026-01-09 07:53:23,979 | INFO     | fitting pss+swap vs Time
[2026-01-09 02:53:56] 2026-01-09 07:53:23,979 | INFO     | sum of square deviations: 226022842.5
[2026-01-09 02:53:56] 2026-01-09 07:53:23,979 | INFO     | sum of deviations: -2400249532.9999995
[2026-01-09 02:53:56] 2026-01-09 07:53:23,980 | INFO     | mean x: 1767942316.5
[2026-01-09 02:53:56] 2026-01-09 07:53:23,980 | INFO     | mean y: 2713263.5555555555
[2026-01-09 02:53:56] 2026-01-09 07:53:23,980 | INFO     | intersect: 18777376357.840206
[2026-01-09 02:53:56] 2026-01-09 07:53:23,980 | INFO     | chi2: 0.011658022817983426
[2026-01-09 02:53:56] 2026-01-09 07:53:23,980 | INFO     | current memory leak: -10.62 B/s (using 90 data points, chi2=0.01)
[2026-01-09 02:53:56] 2026-01-09 07:53:23,980 | INFO     | could have reported an average CPU frequency of 2145 MHz (7 samples)
[2026-01-09 02:53:56] 2026-01-09 07:53:23,981 | INFO     | ..............................
[2026-01-09 02:53:56] 2026-01-09 07:53:23,981 | INFO     | . Timing measurements:
[2026-01-09 02:53:56] 2026-01-09 07:53:23,981 | INFO     | . get job = 0 s
[2026-01-09 02:53:56] 2026-01-09 07:53:23,981 | INFO     | . initial setup = 2 s
[2026-01-09 02:53:56] 2026-01-09 07:53:23,981 | INFO     | . payload setup = 7 s
[2026-01-09 02:53:56] 2026-01-09 07:53:23,981 | INFO     | . stage-in = 0 s
[2026-01-09 02:53:56] 2026-01-09 07:53:23,981 | INFO     | . payload execution = 5900 s
[2026-01-09 02:53:56] 2026-01-09 07:53:23,981 | INFO     | . stage-out = 0 s
[2026-01-09 02:53:56] 2026-01-09 07:53:23,981 | INFO     | . log creation = 0 s
[2026-01-09 02:53:56] 2026-01-09 07:53:23,982 | INFO     | ..............................
[2026-01-09 02:53:56] 2026-01-09 07:53:24,063 | INFO     | 
[2026-01-09 02:53:56] 2026-01-09 07:53:24,063 | INFO     | job summary report
[2026-01-09 02:53:56] 2026-01-09 07:53:24,063 | INFO     | --------------------------------------------------
[2026-01-09 02:53:56] 2026-01-09 07:53:24,063 | INFO     | PanDA job id: 6963167257
[2026-01-09 02:53:56] 2026-01-09 07:53:24,063 | INFO     | task id: 47898826
[2026-01-09 02:53:56] 2026-01-09 07:53:24,063 | INFO     | errors: (none)
[2026-01-09 02:53:56] 2026-01-09 07:53:24,064 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 02:53:56] 2026-01-09 07:53:24,064 | INFO     | pilot state: finished 
[2026-01-09 02:53:56] 2026-01-09 07:53:24,064 | INFO     | transexitcode: 0
[2026-01-09 02:53:56] 2026-01-09 07:53:24,064 | INFO     | exeerrorcode: 0
[2026-01-09 02:53:56] 2026-01-09 07:53:24,064 | INFO     | exeerrordiag: 
[2026-01-09 02:53:56] 2026-01-09 07:53:24,064 | INFO     | exitcode: 0
[2026-01-09 02:53:56] 2026-01-09 07:53:24,064 | INFO     | exitmsg: OK
[2026-01-09 02:53:56] 2026-01-09 07:53:24,065 | INFO     | cpuconsumptiontime: 65297 s
[2026-01-09 02:53:56] 2026-01-09 07:53:24,065 | INFO     | nevents: 400
[2026-01-09 02:53:56] 2026-01-09 07:53:24,065 | INFO     | neventsw: 0
[2026-01-09 02:53:56] 2026-01-09 07:53:24,065 | INFO     | pid: 5141
[2026-01-09 02:53:56] 2026-01-09 07:53:24,065 | INFO     | pgrp: 5141
[2026-01-09 02:53:56] 2026-01-09 07:53:24,065 | INFO     | corecount: 12
[2026-01-09 02:53:56] 2026-01-09 07:53:24,065 | INFO     | event service: False
[2026-01-09 02:53:56] 2026-01-09 07:53:24,066 | INFO     | sizes: {0: 2283143, 1: 2283999, 6: 2284261, 12: 2284289, 5910: 2310985, 5911: 2310984, 5912: 2320222, 5919: 2320360}
[2026-01-09 02:53:56] 2026-01-09 07:53:24,066 | INFO     | --------------------------------------------------
[2026-01-09 02:53:56] 2026-01-09 07:53:24,066 | INFO     | 
[2026-01-09 02:53:56] 2026-01-09 07:53:24,066 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 02:53:56] 2026-01-09 07:53:24,088 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,088 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,088 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,089 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,089 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,089 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,089 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,090 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,091 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,091 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,091 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 02:53:56] 2026-01-09 07:53:24,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,091 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 02:53:56] 2026-01-09 07:53:24,092 | INFO     | job 6963167257 has completed (purged errors)
[2026-01-09 02:53:56] 2026-01-09 07:53:24,092 | INFO     | overall cleanup function is called
[2026-01-09 02:53:56] 2026-01-09 07:53:25,100 | INFO     | --- collectZombieJob: --- 10, [5141]
[2026-01-09 02:53:56] 2026-01-09 07:53:25,100 | INFO     | zombie collector waiting for pid 5141
[2026-01-09 02:53:56] 2026-01-09 07:53:25,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 02:53:56] 2026-01-09 07:53:25,101 | INFO     | collected zombie processes
[2026-01-09 02:53:56] 2026-01-09 07:53:25,101 | INFO     | will attempt to kill all subprocesses of pid=5141
[2026-01-09 02:53:56] 2026-01-09 07:53:25,189 | INFO     | process IDs to be killed: [5141] (in reverse order)
[2026-01-09 02:53:56] 2026-01-09 07:53:25,282 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 02:53:56] 2026-01-09 07:53:25,282 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 02:53:56] 2026-01-09 07:53:25,285 | INFO     | did not find any defunct processes belonging to 5141
[2026-01-09 02:53:56] 2026-01-09 07:53:25,288 | INFO     | did not find any defunct processes belonging to 5141
[2026-01-09 02:53:56] 2026-01-09 07:53:25,288 | INFO     | ready for new job
[2026-01-09 02:53:56] 2026-01-09 07:53:25,289 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 02:53:56] 2026-01-09 07:53:25,290 | INFO     | ***************************************
[2026-01-09 02:53:56] 2026-01-09 07:53:25,290 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 02:53:56] 2026-01-09 07:53:25,290 | INFO     | ***************************************
[2026-01-09 02:53:56] 2026-01-09 07:53:25,290 | INFO     | 
[2026-01-09 02:53:56] 2026-01-09 07:53:25,291 | INFO     | architecture information:
[2026-01-09 02:53:56] 2026-01-09 07:53:25,292 | INFO     | executing command: cat /etc/os-release
[2026-01-09 02:53:56] 2026-01-09 07:53:25,307 | INFO     | cat /etc/os-release:
[2026-01-09 02:53:56] NAME="CentOS Linux"
[2026-01-09 02:53:56] VERSION="7 (Core)"
[2026-01-09 02:53:56] ID="centos"
[2026-01-09 02:53:56] ID_LIKE="rhel fedora"
[2026-01-09 02:53:56] VERSION_ID="7"
[2026-01-09 02:53:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 02:53:56] ANSI_COLOR="0;31"
[2026-01-09 02:53:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 02:53:56] HOME_URL="https://www.centos.org/"
[2026-01-09 02:53:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 02:53:56] 
[2026-01-09 02:53:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 02:53:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 02:53:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 02:53:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 02:53:56] 
[2026-01-09 02:53:56] 2026-01-09 07:53:25,307 | INFO     | ***************************************
[2026-01-09 02:53:56] 2026-01-09 07:53:25,810 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 02:53:56] 2026-01-09 07:53:25,826 | INFO     | sufficient remaining disk space (29312942080 B)
[2026-01-09 02:53:56] 2026-01-09 07:53:25,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 02:53:56] 2026-01-09 07:53:25,827 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 02:53:56] 2026-01-09 07:53:25,827 | INFO     | update_server=False
[2026-01-09 02:53:56] 2026-01-09 07:53:25,827 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 02:53:56] 2026-01-09 07:53:25,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:53:56] 2026-01-09 07:53:25,828 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:53:56] 2026-01-09 07:53:25,828 | INFO     | aborting loop
[2026-01-09 02:53:56] 2026-01-09 07:53:26,400 | INFO     | all job control threads have been joined
[2026-01-09 02:53:56] 2026-01-09 07:53:26,443 | INFO     | all payload control threads have been joined
[2026-01-09 02:53:56] 2026-01-09 07:53:26,536 | INFO     | all data control threads have been joined
[2026-01-09 02:53:56] 2026-01-09 07:53:26,833 | INFO     | [job] retrieve thread has finished
[2026-01-09 02:53:56] 2026-01-09 07:53:26,833 | INFO     | [job] queue monitor thread has finished
[2026-01-09 02:53:56] 2026-01-09 07:53:26,834 | INFO     | [job] job monitor thread has finished
[2026-01-09 02:53:56] 2026-01-09 07:53:26,986 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 02:53:56] 2026-01-09 07:53:26,989 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 02:53:56] 2026-01-09 07:53:27,162 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 02:53:56] 2026-01-09 07:53:27,406 | INFO     | [job] control thread has finished
[2026-01-09 02:53:56] 2026-01-09 07:53:27,448 | INFO     | [payload] control thread has finished
[2026-01-09 02:53:56] 2026-01-09 07:53:27,474 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 02:53:56] 2026-01-09 07:53:27,496 | INFO     | [data] copytool_in thread has finished
[2026-01-09 02:53:56] 2026-01-09 07:53:27,541 | INFO     | [data] control thread has finished
[2026-01-09 02:53:56] 2026-01-09 07:53:27,720 | INFO     | [payload] validate_post thread has finished
[2026-01-09 02:53:56] 2026-01-09 07:53:27,877 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 02:53:56] 2026-01-09 07:53:27,878 | INFO     | [job] validate thread has finished
[2026-01-09 02:53:56] 2026-01-09 07:53:28,301 | INFO     | [payload] failed_post thread has finished
[2026-01-09 02:53:56] 2026-01-09 07:53:29,168 | INFO     | [data] copytool_out thread has finished
[2026-01-09 02:53:56] 2026-01-09 07:53:31,480 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 02:53:56] 2026-01-09 07:53:36,813 | INFO     | job.realtimelogging is not enabled
[2026-01-09 02:53:56] 2026-01-09 07:53:37,274 | INFO     | [monitor] cgroup control has ended
[2026-01-09 02:53:56] 2026-01-09 07:53:37,818 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 02:53:56] 2026-01-09 07:53:39,371 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139697241524032)>', '<ExcThread(monitor, started 139696780842752)>']
[2026-01-09 02:53:56] 2026-01-09 07:53:44,396 | INFO     | all workflow threads have been joined
[2026-01-09 02:53:56] 2026-01-09 07:53:44,397 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 02:53:56] 2026-01-09 07:53:44,397 | INFO     | traces error code: 0
[2026-01-09 02:53:56] 2026-01-09 07:53:44,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 02:53:56] 2026-01-09 07:53:56,271 | INFO     | PID=31049 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 02:53:56] 2026-01-09 07:53:56,272 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 02:53:56] 2026-01-09 07:53:56,272 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 02:53:56] 2026-01-09 07:53:56,272 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 02:53:56] 2026-01-09 07:53:56,272 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 02:53:56] 2026-01-09 07:53:56,272 | INFO     | [monitor] control thread has ended
[2026-01-09 02:53:56] 2026-01-09 07:53:56,363 [wrapper] ==== pilot stdout END ====
[2026-01-09 02:53:56] 2026-01-09 07:53:56,367 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 02:53:56] 2026-01-09 07:53:56,371 [wrapper] pilotpid: 31049
[2026-01-09 02:53:56] 2026-01-09 07:53:56,374 [wrapper] Pilot exit status: 0
[2026-01-09 02:53:56] 2026-01-09 07:53:56,390 [wrapper] pandaids: 6963167257
[2026-01-09 02:53:56] 2026-01-09 07:53:56,430 [wrapper] cleanup supervisor_pilot  4206 31050
[2026-01-09 02:53:56] 2026-01-09 07:53:56,434 [wrapper] Test setup, not cleaning
[2026-01-09 02:53:56] 2026-01-09 07:53:56,438 [wrapper] apfmon messages muted
[2026-01-09 02:53:56] 2026-01-09 07:53:56,442 [wrapper] ==== wrapper stdout END ====
[2026-01-09 02:53:56] 2026-01-09 07:53:56,446 [wrapper] ==== wrapper stderr END ====
[2026-01-09 02:53:56]  *** Error codes and diagnostics ***
[2026-01-09 02:53:56]     "exeErrorCode": 0,
[2026-01-09 02:53:56]     "exeErrorDiag": "",
[2026-01-09 02:53:56]     "pilotErrorCode": 0,
[2026-01-09 02:53:56]     "pilotErrorDiag": "",
[2026-01-09 02:53:56]  *** Listing of results directory ***
[2026-01-09 02:53:56] total 441180
[2026-01-09 02:53:56] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 02:53:56] -rwx------ 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 02:53:56] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 19:57 queuedata.json
[2026-01-09 02:53:56] -rw-r--r-- 1 boincer umatlas       100 Jan  9 01:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 02:53:56] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 01:14 run_atlas
[2026-01-09 02:53:56] -rw-r--r-- 1 boincer umatlas       105 Jan  9 01:14 job.xml
[2026-01-09 02:53:56] -rw-r--r-- 2 boincer umatlas 225005367 Jan  9 01:14 EVNT.47898824._001381.pool.root.1
[2026-01-09 02:53:56] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 01:14 start_atlas.sh
[2026-01-09 02:53:56] drwxrwx--x 2 boincer umatlas      4096 Jan  9 01:14 shared
[2026-01-09 02:53:56] -rw-r--r-- 2 boincer umatlas    592402 Jan  9 01:14 input.tar.gz
[2026-01-09 02:53:56] -rw-r--r-- 1 boincer umatlas         0 Jan  9 01:14 boinc_lockfile
[2026-01-09 02:53:56] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 01:14 pandaJob.out
[2026-01-09 02:53:56] -rw------- 1 boincer umatlas        57 Jan  9 01:14 setup.sh.local
[2026-01-09 02:53:56] -rw------- 1 boincer umatlas    989771 Jan  9 01:14 agis_schedconf.cvmfs.json
[2026-01-09 02:53:56] -rw------- 1 boincer umatlas   1516240 Jan  9 01:14 agis_ddmendpoints.agis.ALL.json
[2026-01-09 02:53:56] drwx------ 5 boincer umatlas      4096 Jan  9 01:14 pilot3
[2026-01-09 02:53:56] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 02:49 init_data.xml
[2026-01-09 02:53:56] -rw------- 1 boincer umatlas 220366052 Jan  9 02:52 HITS.47898826._035632.pool.root.1
[2026-01-09 02:53:56] -rw------- 1 boincer umatlas      1047 Jan  9 02:53 memory_monitor_summary.json
[2026-01-09 02:53:56] -rw-r--r-- 1 boincer umatlas       529 Jan  9 02:53 boinc_task_state.xml
[2026-01-09 02:53:56] -rw------- 1 boincer umatlas    399189 Jan  9 02:53 log.47898826._035632.job.log.tgz.1
[2026-01-09 02:53:56] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 02:53 boinc_mmap_file
[2026-01-09 02:53:56] -rw-r--r-- 1 boincer umatlas        27 Jan  9 02:53 wrapper_checkpoint.txt
[2026-01-09 02:53:56] -rw------- 1 boincer umatlas      7849 Jan  9 02:53 heartbeat.json
[2026-01-09 02:53:56] -rw------- 1 boincer umatlas        95 Jan  9 02:53 pilot_heartbeat.json
[2026-01-09 02:53:56] -rw------- 1 boincer umatlas       745 Jan  9 02:53 pilotlog.txt
[2026-01-09 02:53:56] -rw------- 1 boincer umatlas    841616 Jan  9 02:53 log.47898826._035632.job.log.1
[2026-01-09 02:53:56] -rw------- 1 boincer umatlas       357 Jan  9 02:53 output.list
[2026-01-09 02:53:56] -rw-r--r-- 1 boincer umatlas       620 Jan  9 02:53 runtime_log
[2026-01-09 02:53:56] -rw------- 1 boincer umatlas   1259520 Jan  9 02:53 result.tar.gz
[2026-01-09 02:53:56] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 02:53 runtime_log.err
[2026-01-09 02:53:56] -rw------- 1 boincer umatlas       659 Jan  9 02:53 Dz1MDmnzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHplKDmoy1cen.diag
[2026-01-09 02:53:56] -rw-r--r-- 1 boincer umatlas     22008 Jan  9 02:53 stderr.txt
[2026-01-09 02:53:56] HITS file was successfully produced:
[2026-01-09 02:53:56] -rw------- 1 boincer umatlas 220366052 Jan  9 02:52 shared/HITS.pool.root.1
[2026-01-09 02:53:56]  *** Contents of shared directory: ***
[2026-01-09 02:53:56] total 436772
[2026-01-09 02:53:56] -rw-r--r-- 2 boincer umatlas 225005367 Jan  9 01:14 ATLAS.root_0
[2026-01-09 02:53:56] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 01:14 start_atlas.sh
[2026-01-09 02:53:56] -rw-r--r-- 2 boincer umatlas    592402 Jan  9 01:14 input.tar.gz
[2026-01-09 02:53:56] -rw------- 1 boincer umatlas 220366052 Jan  9 02:52 HITS.pool.root.1
[2026-01-09 02:53:56] -rw------- 1 boincer umatlas   1259520 Jan  9 02:53 result.tar.gz
02:53:57 (27006): run_atlas exited; CPU time 65261.066185
02:53:57 (27006): called boinc_finish(0)

</stderr_txt>
]]>

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