Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:28:07 (1146241): wrapper (7.7.26015): starting
11:28:07 (1146241): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 11:28:07] Arguments: --nthreads 12
[2026-01-09 11:28:07] Threads: 12
[2026-01-09 11:28:07] Checking for CVMFS
[2026-01-09 11:28:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:28:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:28:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:28:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:28:08] 2.12.7.0 3936030 2522 75876 154940 0 57 2623127 4097024 923 130560 0 3365716 99.970 262731 21722 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-09 11:28:08] CVMFS is ok
[2026-01-09 11:28:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:28:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:28:08] Further information can be found at the LHC@home message board.
[2026-01-09 11:28:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:28:08] Checking for apptainer binary...
[2026-01-09 11:28:08] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-09 11:28:08] apptainer is not installed, using version from CVMFS
[2026-01-09 11:28:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:28:08] pckelar4.cern.ch
[2026-01-09 11:28:08] apptainer works
[2026-01-09 11:28:08] Set ATHENA_PROC_NUMBER=12
[2026-01-09 11:28:08] Set ATHENA_CORE_NUMBER=12
[2026-01-09 11:28:08] Starting ATLAS job with PandaID=6963167252
[2026-01-09 11:28:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:07:39]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:07:39] 2026-01-09 13:06:56,980 | INFO     | .. there are 2 such processes running
[2026-01-09 14:07:39] 2026-01-09 13:06:57,981 | INFO     | time since job start (9519s) is within the limit (349056.0s)
[2026-01-09 14:07:39] 2026-01-09 13:06:58,111 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 14:07:39] 2026-01-09 13:06:58,117 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2817.4533333333334
[2026-01-09 14:07:39] 2026-01-09 13:06:58,122 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6963167252/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:07:39] 2026-01-09 13:06:58,123 | INFO     | extracted standard info from prmon json
[2026-01-09 14:07:39] 2026-01-09 13:06:58,123 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:07:39] 2026-01-09 13:06:58,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:07:39] 2026-01-09 13:06:58,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:07:39] 2026-01-09 13:06:58,124 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:07:39] 2026-01-09 13:06:58,128 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:07:39] 2026-01-09 13:06:58,129 | INFO     | sum of square deviations: 1177156955.0
[2026-01-09 14:07:39] 2026-01-09 13:06:58,130 | INFO     | sum of deviations: -17567388840.999992
[2026-01-09 14:07:39] 2026-01-09 13:06:58,130 | INFO     | mean x: 1767959255.5
[2026-01-09 14:07:39] 2026-01-09 13:06:58,130 | INFO     | mean y: 2745521.8076923075
[2026-01-09 14:07:39] 2026-01-09 13:06:58,131 | INFO     | intersect: 26387016170.247562
[2026-01-09 14:07:39] 2026-01-09 13:06:58,131 | INFO     | chi2: 2.35635374055162
[2026-01-09 14:07:39] 2026-01-09 13:06:58,131 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 14:07:39] 2026-01-09 13:06:58,133 | INFO     | sum of deviations: -6127628729.999989
[2026-01-09 14:07:39] 2026-01-09 13:06:58,133 | INFO     | mean x: 1767959103.0
[2026-01-09 14:07:39] 2026-01-09 13:06:58,133 | INFO     | mean y: 2761053.0927152317
[2026-01-09 14:07:39] 2026-01-09 13:06:58,133 | INFO     | intersect: 10150620421.269293
[2026-01-09 14:07:39] 2026-01-09 13:06:58,133 | INFO     | chi2: 1.6667805720747217
[2026-01-09 14:07:39] 2026-01-09 13:06:58,134 | INFO     | current chi2=1.6667805720747217 (change=29.264416314482126 %)
[2026-01-09 14:07:39] 2026-01-09 13:06:58,134 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 14:07:39] 2026-01-09 13:06:58,135 | INFO     | sum of deviations: -5585272972.0
[2026-01-09 14:07:39] 2026-01-09 13:06:58,135 | INFO     | mean x: 1767958950.5
[2026-01-09 14:07:39] 2026-01-09 13:06:58,136 | INFO     | mean y: 2761859.684931507
[2026-01-09 14:07:39] 2026-01-09 13:06:58,136 | INFO     | intersect: 10235690930.125156
[2026-01-09 14:07:39] 2026-01-09 13:06:58,136 | INFO     | chi2: 1.666624043950428
[2026-01-09 14:07:39] 2026-01-09 13:06:58,136 | INFO     | current chi2=1.666624043950428 (change=0.009391045643088911 %)
[2026-01-09 14:07:39] 2026-01-09 13:06:58,136 | INFO     | right removable region: 145
[2026-01-09 14:07:39] 2026-01-09 13:06:58,137 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 14:07:39] 2026-01-09 13:06:58,138 | INFO     | sum of deviations: -41941159756.0
[2026-01-09 14:07:39] 2026-01-09 13:06:58,138 | INFO     | mean x: 1767959408.0
[2026-01-09 14:07:39] 2026-01-09 13:06:58,138 | INFO     | mean y: 2778939.2317880793
[2026-01-09 14:07:39] 2026-01-09 13:06:58,138 | INFO     | intersect: 69460816154.0403
[2026-01-09 14:07:39] 2026-01-09 13:06:58,139 | INFO     | chi2: 0.9906832854984721
[2026-01-09 14:07:39] 2026-01-09 13:06:58,139 | INFO     | current chi2=0.9906832854984721 (change=57.956937091009344 %)
[2026-01-09 14:07:39] 2026-01-09 13:06:58,139 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 14:07:39] 2026-01-09 13:06:58,140 | INFO     | sum of deviations: -42407967105.5
[2026-01-09 14:07:39] 2026-01-09 13:06:58,141 | INFO     | mean x: 1767959560.5
[2026-01-09 14:07:39] 2026-01-09 13:06:58,141 | INFO     | mean y: 2779517.3493150687
[2026-01-09 14:07:39] 2026-01-09 13:06:58,141 | INFO     | intersect: 77699585262.8092
[2026-01-09 14:07:39] 2026-01-09 13:06:58,141 | INFO     | chi2: 0.9477853419281217
[2026-01-09 14:07:39] 2026-01-09 13:06:58,142 | INFO     | current chi2=0.9477853419281217 (change=4.3301370072844065 %)
[2026-01-09 14:07:39] 2026-01-09 13:06:58,142 | INFO     | left removable region: 20
[2026-01-09 14:07:39] 2026-01-09 13:06:58,142 | INFO     | sum of square deviations: 605592750.0
[2026-01-09 14:07:39] 2026-01-09 13:06:58,143 | INFO     | sum of deviations: -17703883783.0
[2026-01-09 14:07:39] 2026-01-09 13:06:58,143 | INFO     | mean x: 1767959530.0
[2026-01-09 14:07:39] 2026-01-09 13:06:58,143 | INFO     | mean y: 2777263.76
[2026-01-09 14:07:39] 2026-01-09 13:06:58,144 | INFO     | intersect: 51687263334.91475
[2026-01-09 14:07:39] 2026-01-09 13:06:58,144 | INFO     | chi2: 0.1920137092765376
[2026-01-09 14:07:39] 2026-01-09 13:06:58,144 | INFO     | current memory leak: -29.23 B/s (using 125 data points, chi2=0.19)
[2026-01-09 14:07:39] 2026-01-09 13:06:58,145 | INFO     | could have reported an average CPU frequency of 2805 MHz (9 samples)
[2026-01-09 14:07:39] 2026-01-09 13:06:58,145 | INFO     | ..............................
[2026-01-09 14:07:39] 2026-01-09 13:06:58,145 | INFO     | . Timing measurements:
[2026-01-09 14:07:39] 2026-01-09 13:06:58,145 | INFO     | . get job = 0 s
[2026-01-09 14:07:39] 2026-01-09 13:06:58,145 | INFO     | . initial setup = 1 s
[2026-01-09 14:07:39] 2026-01-09 13:06:58,146 | INFO     | . payload setup = 7 s
[2026-01-09 14:07:39] 2026-01-09 13:06:58,146 | INFO     | . stage-in = 0 s
[2026-01-09 14:07:39] 2026-01-09 13:06:58,146 | INFO     | . payload execution = 9483 s
[2026-01-09 14:07:39] 2026-01-09 13:06:58,146 | INFO     | . stage-out = 1 s
[2026-01-09 14:07:39] 2026-01-09 13:06:58,146 | INFO     | . log creation = 0 s
[2026-01-09 14:07:39] 2026-01-09 13:06:58,146 | INFO     | ..............................
[2026-01-09 14:07:39] 2026-01-09 13:06:58,297 | INFO     | 
[2026-01-09 14:07:39] 2026-01-09 13:06:58,297 | INFO     | job summary report
[2026-01-09 14:07:39] 2026-01-09 13:06:58,297 | INFO     | --------------------------------------------------
[2026-01-09 14:07:39] 2026-01-09 13:06:58,298 | INFO     | PanDA job id: 6963167252
[2026-01-09 14:07:39] 2026-01-09 13:06:58,298 | INFO     | task id: 47898826
[2026-01-09 14:07:39] 2026-01-09 13:06:58,298 | INFO     | errors: (none)
[2026-01-09 14:07:39] 2026-01-09 13:06:58,298 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:07:39] 2026-01-09 13:06:58,298 | INFO     | pilot state: finished 
[2026-01-09 14:07:39] 2026-01-09 13:06:58,298 | INFO     | transexitcode: 0
[2026-01-09 14:07:39] 2026-01-09 13:06:58,299 | INFO     | exeerrorcode: 0
[2026-01-09 14:07:39] 2026-01-09 13:06:58,299 | INFO     | exeerrordiag: 
[2026-01-09 14:07:39] 2026-01-09 13:06:58,299 | INFO     | exitcode: 0
[2026-01-09 14:07:39] 2026-01-09 13:06:58,299 | INFO     | exitmsg: OK
[2026-01-09 14:07:39] 2026-01-09 13:06:58,299 | INFO     | cpuconsumptiontime: 105544 s
[2026-01-09 14:07:39] 2026-01-09 13:06:58,299 | INFO     | nevents: 400
[2026-01-09 14:07:39] 2026-01-09 13:06:58,300 | INFO     | neventsw: 0
[2026-01-09 14:07:39] 2026-01-09 13:06:58,300 | INFO     | pid: 1157729
[2026-01-09 14:07:39] 2026-01-09 13:06:58,300 | INFO     | pgrp: 1157729
[2026-01-09 14:07:39] 2026-01-09 13:06:58,300 | INFO     | corecount: 12
[2026-01-09 14:07:39] 2026-01-09 13:06:58,300 | INFO     | event service: False
[2026-01-09 14:07:39] 2026-01-09 13:06:58,300 | INFO     | sizes: {0: 2283143, 1: 2283999, 2: 2283999, 6: 2284289, 13: 2284317, 9494: 2312840, 9495: 2312967, 9496: 2322021, 9497: 2322077, 9503: 2322335}
[2026-01-09 14:07:39] 2026-01-09 13:06:58,301 | INFO     | --------------------------------------------------
[2026-01-09 14:07:39] 2026-01-09 13:06:58,301 | INFO     | 
[2026-01-09 14:07:39] 2026-01-09 13:06:58,301 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-09 14:07:39] 2026-01-09 13:06:58,319 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,320 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,320 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,320 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,320 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,321 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,321 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,321 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,321 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,321 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,321 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,322 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,322 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,322 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,322 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,322 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,322 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,323 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:07:39] 2026-01-09 13:06:58,323 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,323 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:07:39] 2026-01-09 13:06:58,323 | INFO     | job 6963167252 has completed (purged errors)
[2026-01-09 14:07:39] 2026-01-09 13:06:58,323 | INFO     | overall cleanup function is called
[2026-01-09 14:07:39] 2026-01-09 13:06:59,332 | INFO     | --- collectZombieJob: --- 10, [1157729]
[2026-01-09 14:07:39] 2026-01-09 13:06:59,332 | INFO     | zombie collector waiting for pid 1157729
[2026-01-09 14:07:39] 2026-01-09 13:06:59,332 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:07:39] 2026-01-09 13:06:59,333 | INFO     | collected zombie processes
[2026-01-09 14:07:39] 2026-01-09 13:06:59,333 | INFO     | will attempt to kill all subprocesses of pid=1157729
[2026-01-09 14:07:39] 2026-01-09 13:06:59,502 | INFO     | process IDs to be killed: [1157729] (in reverse order)
[2026-01-09 14:07:39] 2026-01-09 13:06:59,556 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:07:39] 2026-01-09 13:06:59,556 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:07:39] 2026-01-09 13:06:59,563 | INFO     | did not find any defunct processes belonging to 1157729
[2026-01-09 14:07:39] 2026-01-09 13:06:59,568 | INFO     | did not find any defunct processes belonging to 1157729
[2026-01-09 14:07:39] 2026-01-09 13:06:59,569 | INFO     | ready for new job
[2026-01-09 14:07:39] 2026-01-09 13:06:59,569 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:07:39] 2026-01-09 13:06:59,571 | INFO     | ***************************************
[2026-01-09 14:07:39] 2026-01-09 13:06:59,571 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:07:39] 2026-01-09 13:06:59,571 | INFO     | ***************************************
[2026-01-09 14:07:39] 2026-01-09 13:06:59,572 | INFO     | 
[2026-01-09 14:07:39] 2026-01-09 13:06:59,573 | INFO     | architecture information:
[2026-01-09 14:07:39] 2026-01-09 13:06:59,573 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:07:39] 2026-01-09 13:06:59,588 | INFO     | cat /etc/os-release:
[2026-01-09 14:07:39] NAME="CentOS Linux"
[2026-01-09 14:07:39] VERSION="7 (Core)"
[2026-01-09 14:07:39] ID="centos"
[2026-01-09 14:07:39] ID_LIKE="rhel fedora"
[2026-01-09 14:07:39] VERSION_ID="7"
[2026-01-09 14:07:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:07:39] ANSI_COLOR="0;31"
[2026-01-09 14:07:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:07:39] HOME_URL="https://www.centos.org/"
[2026-01-09 14:07:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:07:39] 
[2026-01-09 14:07:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:07:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:07:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:07:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:07:39] 
[2026-01-09 14:07:39] 2026-01-09 13:06:59,588 | INFO     | ***************************************
[2026-01-09 14:07:39] 2026-01-09 13:07:00,091 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-09 14:07:39] 2026-01-09 13:07:00,108 | INFO     | sufficient remaining disk space (779530272768 B)
[2026-01-09 14:07:39] 2026-01-09 13:07:00,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:07:39] 2026-01-09 13:07:00,108 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:07:39] 2026-01-09 13:07:00,108 | INFO     | update_server=False
[2026-01-09 14:07:39] 2026-01-09 13:07:00,109 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:07:39] 2026-01-09 13:07:00,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:07:39] 2026-01-09 13:07:00,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:07:39] 2026-01-09 13:07:00,109 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:07:39] 2026-01-09 13:07:00,110 | INFO     | aborting loop
[2026-01-09 14:07:39] 2026-01-09 13:07:00,261 | INFO     | all data control threads have been joined
[2026-01-09 14:07:39] 2026-01-09 13:07:00,307 | INFO     | all job control threads have been joined
[2026-01-09 14:07:39] 2026-01-09 13:07:00,805 | INFO     | all payload control threads have been joined
[2026-01-09 14:07:39] 2026-01-09 13:07:01,114 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:07:39] 2026-01-09 13:07:01,115 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:07:39] 2026-01-09 13:07:01,116 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:07:39] 2026-01-09 13:07:01,116 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:07:39] 2026-01-09 13:07:01,255 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:07:39] 2026-01-09 13:07:01,266 | INFO     | [data] control thread has finished
[2026-01-09 14:07:39] 2026-01-09 13:07:01,312 | INFO     | [job] control thread has finished
[2026-01-09 14:07:39] 2026-01-09 13:07:01,335 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:07:39] 2026-01-09 13:07:01,673 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:07:39] 2026-01-09 13:07:01,811 | INFO     | [payload] control thread has finished
[2026-01-09 14:07:39] 2026-01-09 13:07:02,068 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:07:39] 2026-01-09 13:07:02,115 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:07:39] 2026-01-09 13:07:02,236 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:07:39] 2026-01-09 13:07:02,281 | INFO     | [job] validate thread has finished
[2026-01-09 14:07:39] 2026-01-09 13:07:02,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:07:39] 2026-01-09 13:07:02,488 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:07:39] 2026-01-09 13:07:06,383 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:07:39] 2026-01-09 13:07:31,270 | INFO     | PID=1150163 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 14:07:39] 2026-01-09 13:07:31,270 | INFO     | .. there are 2 such processes running
[2026-01-09 14:07:39] 2026-01-09 13:07:31,271 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:07:39] 2026-01-09 13:07:31,271 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:07:39] 2026-01-09 13:07:31,271 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:07:39] 2026-01-09 13:07:33,431 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:07:39] 2026-01-09 13:07:34,524 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140306248255296)>', '<ExcThread(monitor, started 140305558918912)>']
[2026-01-09 14:07:39] 2026-01-09 13:07:35,292 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:07:39] 2026-01-09 13:07:35,292 | INFO     | [monitor] control thread has ended
[2026-01-09 14:07:39] 2026-01-09 13:07:39,549 | INFO     | all workflow threads have been joined
[2026-01-09 14:07:39] 2026-01-09 13:07:39,549 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:07:39] 2026-01-09 13:07:39,550 | INFO     | traces error code: 0
[2026-01-09 14:07:39] 2026-01-09 13:07:39,550 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:07:39] 2026-01-09 13:07:39,657 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:07:39] 2026-01-09 13:07:39,660 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:07:39] 2026-01-09 13:07:39,662 [wrapper] pilotpid: 1150163
[2026-01-09 14:07:39] 2026-01-09 13:07:39,664 [wrapper] Pilot exit status: 0
[2026-01-09 14:07:39] 2026-01-09 13:07:39,673 [wrapper] pandaids: 6963167252
[2026-01-09 14:07:39] 2026-01-09 13:07:39,707 [wrapper] cleanup supervisor_pilot 1228511 1150164
[2026-01-09 14:07:39] 2026-01-09 13:07:39,710 [wrapper] Test setup, not cleaning
[2026-01-09 14:07:39] 2026-01-09 13:07:39,712 [wrapper] apfmon messages muted
[2026-01-09 14:07:39] 2026-01-09 13:07:39,715 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:07:39] 2026-01-09 13:07:39,717 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:07:39]  *** Error codes and diagnostics ***
[2026-01-09 14:07:39]     "exeErrorCode": 0,
[2026-01-09 14:07:39]     "exeErrorDiag": "",
[2026-01-09 14:07:39]     "pilotErrorCode": 0,
[2026-01-09 14:07:39]     "pilotErrorDiag": "",
[2026-01-09 14:07:39]  *** Listing of results directory ***
[2026-01-09 14:07:39] total 449332
[2026-01-09 14:07:39] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 14:07:39] -rwx------. 1 boinc boinc     36322 Jan  9 01:57 runpilot2-wrapper.sh
[2026-01-09 14:07:39] -rw-r--r--. 1 boinc boinc      5112 Jan  9 01:57 queuedata.json
[2026-01-09 14:07:39] -rw-r--r--. 1 boinc boinc       100 Jan  9 11:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:07:39] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 11:28 run_atlas
[2026-01-09 14:07:39] -rw-r--r--. 1 boinc boinc       105 Jan  9 11:28 job.xml
[2026-01-09 14:07:39] -rw-r--r--. 2 boinc boinc 225005367 Jan  9 11:28 EVNT.47898824._001381.pool.root.1
[2026-01-09 14:07:39] -rw-r--r--. 1 boinc boinc      6290 Jan  9 11:28 init_data.xml
[2026-01-09 14:07:39] -rw-r--r--. 2 boinc boinc     15847 Jan  9 11:28 start_atlas.sh
[2026-01-09 14:07:39] drwxrwx--x. 2 boinc boinc      4096 Jan  9 11:28 shared
[2026-01-09 14:07:39] -rw-r--r--. 2 boinc boinc    592401 Jan  9 11:28 input.tar.gz
[2026-01-09 14:07:39] -rw-r--r--. 1 boinc boinc         0 Jan  9 11:28 boinc_lockfile
[2026-01-09 14:07:39] -rw-r--r--. 1 boinc boinc      2520 Jan  9 11:28 pandaJob.out
[2026-01-09 14:07:39] -rw-------. 1 boinc boinc    989369 Jan  9 11:28 agis_schedconf.cvmfs.json
[2026-01-09 14:07:39] -rw-------. 1 boinc boinc   1516240 Jan  9 11:28 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:07:39] drwx------. 5 boinc boinc      4096 Jan  9 11:28 pilot3
[2026-01-09 14:07:39] -rw-r--r--. 1 boinc boinc       530 Jan  9 14:06 boinc_task_state.xml
[2026-01-09 14:07:39] -rw-------. 1 boinc boinc 227569020 Jan  9 14:06 HITS.47898826._035627.pool.root.1
[2026-01-09 14:07:39] -rw-------. 1 boinc boinc      1022 Jan  9 14:06 memory_monitor_summary.json
[2026-01-09 14:07:39] -rw-------. 1 boinc boinc    448691 Jan  9 14:06 log.47898826._035627.job.log.tgz.1
[2026-01-09 14:07:39] -rw-------. 1 boinc boinc      7800 Jan  9 14:06 heartbeat.json
[2026-01-09 14:07:39] -rw-------. 1 boinc boinc        95 Jan  9 14:07 pilot_heartbeat.json
[2026-01-09 14:07:39] -rw-r--r--. 1 boinc boinc        28 Jan  9 14:07 wrapper_checkpoint.txt
[2026-01-09 14:07:39] -rw-r--r--. 1 boinc boinc      8192 Jan  9 14:07 boinc_mmap_file
[2026-01-09 14:07:39] -rw-------. 1 boinc boinc      4824 Jan  9 14:07 pilotlog.txt
[2026-01-09 14:07:39] -rw-------. 1 boinc boinc   1366354 Jan  9 14:07 log.47898826._035627.job.log.1
[2026-01-09 14:07:39] -rw-------. 1 boinc boinc       357 Jan  9 14:07 output.list
[2026-01-09 14:07:39] -rw-r--r--. 1 boinc boinc       620 Jan  9 14:07 runtime_log
[2026-01-09 14:07:39] -rw-------. 1 boinc boinc   1832960 Jan  9 14:07 result.tar.gz
[2026-01-09 14:07:39] -rw-r--r--. 1 boinc boinc      8841 Jan  9 14:07 runtime_log.err
[2026-01-09 14:07:39] -rw-------. 1 boinc boinc       660 Jan  9 14:07 RTxMDmnzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDplKDmHfKa0n.diag
[2026-01-09 14:07:39] -rw-r--r--. 1 boinc boinc     21190 Jan  9 14:07 stderr.txt
[2026-01-09 14:07:39] HITS file was successfully produced:
[2026-01-09 14:07:39] -rw-------. 1 boinc boinc 227569020 Jan  9 14:06 shared/HITS.pool.root.1
[2026-01-09 14:07:39]  *** Contents of shared directory: ***
[2026-01-09 14:07:39] total 444364
[2026-01-09 14:07:39] -rw-r--r--. 2 boinc boinc 225005367 Jan  9 11:28 ATLAS.root_0
[2026-01-09 14:07:39] -rw-r--r--. 2 boinc boinc     15847 Jan  9 11:28 start_atlas.sh
[2026-01-09 14:07:39] -rw-r--r--. 2 boinc boinc    592401 Jan  9 11:28 input.tar.gz
[2026-01-09 14:07:39] -rw-------. 1 boinc boinc 227569020 Jan  9 14:06 HITS.pool.root.1
[2026-01-09 14:07:39] -rw-------. 1 boinc boinc   1832960 Jan  9 14:07 result.tar.gz
14:07:40 (1146241): run_atlas exited; CPU time 105732.426163
14:07:40 (1146241): called boinc_finish(0)

</stderr_txt>
]]>

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