Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:10:41 (5587): wrapper (7.7.26015): starting
01:10:41 (5587): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 01:10:41] Arguments: --nthreads 8
[2026-01-09 01:10:41] Threads: 8
[2026-01-09 01:10:41] Checking for CVMFS
[2026-01-09 01:10:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 01:10:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 01:10:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 01:10:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 01:10:41] 2.11.2.0 2847 136282 82908 154933 2 82 20079449 20275200 1 130560 0 36423968 99.822 9056018 26479 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 01:10:41] CVMFS is ok
[2026-01-09 01:10:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 01:10:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 01:10:41] Further information can be found at the LHC@home message board.
[2026-01-09 01:10:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 01:10:41] Checking for apptainer binary...
[2026-01-09 01:10:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 01:10:41] Running /usr/bin/apptainer --version
[2026-01-09 01:10:41] apptainer version 1.3.2-1.el7
[2026-01-09 01:10:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 01:10:43] c-204-19.aglt2.org
[2026-01-09 01:10:43] apptainer works
[2026-01-09 01:10:43] Set ATHENA_PROC_NUMBER=8
[2026-01-09 01:10:43] Set ATHENA_CORE_NUMBER=8
[2026-01-09 01:10:43] Starting ATLAS job with PandaID=6963167520
[2026-01-09 01:10:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 04:11:26]  *** The last 200 lines of the pilot log: ***
[2026-01-09 04:11:26] 2026-01-09 09:10:43,510 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 04:11:26] 2026-01-09 09:10:43,513 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2026-01-09 04:11:26] 2026-01-09 09:10:43,515 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963167520/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 04:11:26] 2026-01-09 09:10:43,516 | INFO     | extracted standard info from prmon json
[2026-01-09 04:11:26] 2026-01-09 09:10:43,516 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 04:11:26] 2026-01-09 09:10:43,516 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 04:11:26] 2026-01-09 09:10:43,516 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 04:11:26] 2026-01-09 09:10:43,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 04:11:26] 2026-01-09 09:10:43,520 | INFO     | fitting pss+swap vs Time
[2026-01-09 04:11:26] 2026-01-09 09:10:43,520 | INFO     | sum of square deviations: 1719434084.9943547
[2026-01-09 04:11:26] 2026-01-09 09:10:43,521 | INFO     | sum of deviations: 20459077550.23165
[2026-01-09 04:11:26] 2026-01-09 09:10:43,521 | INFO     | mean x: 1767944462.0056498
[2026-01-09 04:11:26] 2026-01-09 09:10:43,521 | INFO     | mean y: 2462564.768361582
[2026-01-09 04:11:26] 2026-01-09 09:10:43,522 | INFO     | intersect: -21033826740.14845
[2026-01-09 04:11:26] 2026-01-09 09:10:43,522 | INFO     | chi2: 2.087798897048054
[2026-01-09 04:11:26] 2026-01-09 09:10:43,522 | INFO     | sum of square deviations: 1577794524.9941938
[2026-01-09 04:11:26] 2026-01-09 09:10:43,523 | INFO     | sum of deviations: 31323611684.86045
[2026-01-09 04:11:26] 2026-01-09 09:10:43,523 | INFO     | mean x: 1767944309.5058138
[2026-01-09 04:11:26] 2026-01-09 09:10:43,523 | INFO     | mean y: 2473974.1395348837
[2026-01-09 04:11:26] 2026-01-09 09:10:43,524 | INFO     | intersect: -35096140043.18483
[2026-01-09 04:11:26] 2026-01-09 09:10:43,524 | INFO     | chi2: 1.3139888821073287
[2026-01-09 04:11:26] 2026-01-09 09:10:43,524 | INFO     | current chi2=1.3139888821073287 (change=37.06343633167054 %)
[2026-01-09 04:11:26] 2026-01-09 09:10:43,524 | INFO     | sum of square deviations: 1444155114.9940135
[2026-01-09 04:11:26] 2026-01-09 09:10:43,525 | INFO     | sum of deviations: 30299570473.70658
[2026-01-09 04:11:26] 2026-01-09 09:10:43,525 | INFO     | mean x: 1767944157.0059881
[2026-01-09 04:11:26] 2026-01-09 09:10:43,525 | INFO     | mean y: 2472805.293413174
[2026-01-09 04:11:26] 2026-01-09 09:10:43,526 | INFO     | intersect: -37090459956.99007
[2026-01-09 04:11:26] 2026-01-09 09:10:43,526 | INFO     | chi2: 1.314163656251478
[2026-01-09 04:11:26] 2026-01-09 09:10:43,526 | INFO     | current chi2=1.314163656251478 (change=-0.01330103675375481 %)
[2026-01-09 04:11:26] 2026-01-09 09:10:43,526 | INFO     | right removable region: 166
[2026-01-09 04:11:26] 2026-01-09 09:10:43,526 | INFO     | sum of square deviations: 1577793914.9941938
[2026-01-09 04:11:26] 2026-01-09 09:10:43,527 | INFO     | sum of deviations: -3722864422.261628
[2026-01-09 04:11:26] 2026-01-09 09:10:43,527 | INFO     | mean x: 1767944614.5058138
[2026-01-09 04:11:26] 2026-01-09 09:10:43,528 | INFO     | mean y: 2488229.761627907
[2026-01-09 04:11:26] 2026-01-09 09:10:43,528 | INFO     | intersect: 4174020419.9443765
[2026-01-09 04:11:26] 2026-01-09 09:10:43,528 | INFO     | chi2: 0.7999102048722607
[2026-01-09 04:11:26] 2026-01-09 09:10:43,528 | INFO     | current chi2=0.7999102048722607 (change=61.68643416742597 %)
[2026-01-09 04:11:26] 2026-01-09 09:10:43,528 | INFO     | sum of square deviations: 1444153894.9940135
[2026-01-09 04:11:26] 2026-01-09 09:10:43,529 | INFO     | sum of deviations: -5727470268.736526
[2026-01-09 04:11:26] 2026-01-09 09:10:43,529 | INFO     | mean x: 1767944767.0059881
[2026-01-09 04:11:26] 2026-01-09 09:10:43,530 | INFO     | mean y: 2490512.736526946
[2026-01-09 04:11:26] 2026-01-09 09:10:43,530 | INFO     | intersect: 7014105497.050297
[2026-01-09 04:11:26] 2026-01-09 09:10:43,530 | INFO     | chi2: 0.7959861487557132
[2026-01-09 04:11:26] 2026-01-09 09:10:43,530 | INFO     | current chi2=0.7959861487557132 (change=0.49056207717392464 %)
[2026-01-09 04:11:26] 2026-01-09 09:10:43,530 | INFO     | left removable region: 20
[2026-01-09 04:11:26] 2026-01-09 09:10:43,530 | INFO     | sum of square deviations: 964980320.4931524
[2026-01-09 04:11:26] 2026-01-09 09:10:43,531 | INFO     | sum of deviations: 2782503443.150684
[2026-01-09 04:11:26] 2026-01-09 09:10:43,531 | INFO     | mean x: 1767944736.5068493
[2026-01-09 04:11:26] 2026-01-09 09:10:43,531 | INFO     | mean y: 2506234.3493150687
[2026-01-09 04:11:26] 2026-01-09 09:10:43,532 | INFO     | intersect: -5095330697.824003
[2026-01-09 04:11:26] 2026-01-09 09:10:43,532 | INFO     | chi2: 0.0010423010160186838
[2026-01-09 04:11:26] 2026-01-09 09:10:43,532 | INFO     | current memory leak: 2.88 B/s (using 146 data points, chi2=0.00)
[2026-01-09 04:11:26] 2026-01-09 09:10:43,532 | INFO     | could have reported an average CPU frequency of 2012 MHz (9 samples)
[2026-01-09 04:11:26] 2026-01-09 09:10:43,533 | INFO     | ..............................
[2026-01-09 04:11:26] 2026-01-09 09:10:43,533 | INFO     | . Timing measurements:
[2026-01-09 04:11:26] 2026-01-09 09:10:43,533 | INFO     | . get job = 0 s
[2026-01-09 04:11:26] 2026-01-09 09:10:43,533 | INFO     | . initial setup = 2 s
[2026-01-09 04:11:26] 2026-01-09 09:10:43,533 | INFO     | . payload setup = 8 s
[2026-01-09 04:11:26] 2026-01-09 09:10:43,533 | INFO     | . stage-in = 0 s
[2026-01-09 04:11:26] 2026-01-09 09:10:43,533 | INFO     | . payload execution = 10743 s
[2026-01-09 04:11:26] 2026-01-09 09:10:43,533 | INFO     | . stage-out = 0 s
[2026-01-09 04:11:26] 2026-01-09 09:10:43,533 | INFO     | . log creation = 0 s
[2026-01-09 04:11:26] 2026-01-09 09:10:43,534 | INFO     | ..............................
[2026-01-09 04:11:26] 2026-01-09 09:10:43,910 | INFO     | 
[2026-01-09 04:11:26] 2026-01-09 09:10:43,910 | INFO     | job summary report
[2026-01-09 04:11:26] 2026-01-09 09:10:43,910 | INFO     | --------------------------------------------------
[2026-01-09 04:11:26] 2026-01-09 09:10:43,910 | INFO     | PanDA job id: 6963167520
[2026-01-09 04:11:26] 2026-01-09 09:10:43,911 | INFO     | task id: 47898826
[2026-01-09 04:11:26] 2026-01-09 09:10:43,911 | INFO     | errors: (none)
[2026-01-09 04:11:26] 2026-01-09 09:10:43,911 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 04:11:26] 2026-01-09 09:10:43,911 | INFO     | pilot state: finished 
[2026-01-09 04:11:26] 2026-01-09 09:10:43,911 | INFO     | transexitcode: 0
[2026-01-09 04:11:26] 2026-01-09 09:10:43,911 | INFO     | exeerrorcode: 0
[2026-01-09 04:11:26] 2026-01-09 09:10:43,912 | INFO     | exeerrordiag: 
[2026-01-09 04:11:26] 2026-01-09 09:10:43,912 | INFO     | exitcode: 0
[2026-01-09 04:11:26] 2026-01-09 09:10:43,912 | INFO     | exitmsg: OK
[2026-01-09 04:11:26] 2026-01-09 09:10:43,912 | INFO     | cpuconsumptiontime: 79174 s
[2026-01-09 04:11:26] 2026-01-09 09:10:43,912 | INFO     | nevents: 400
[2026-01-09 04:11:26] 2026-01-09 09:10:43,912 | INFO     | neventsw: 0
[2026-01-09 04:11:26] 2026-01-09 09:10:43,913 | INFO     | pid: 15742
[2026-01-09 04:11:26] 2026-01-09 09:10:43,913 | INFO     | pgrp: 15742
[2026-01-09 04:11:26] 2026-01-09 09:10:43,913 | INFO     | corecount: 8
[2026-01-09 04:11:26] 2026-01-09 09:10:43,913 | INFO     | event service: False
[2026-01-09 04:11:26] 2026-01-09 09:10:43,913 | INFO     | sizes: {0: 2283800, 1: 2283999, 7: 2284261, 11: 2284289, 10756: 2313322, 10757: 2322504, 10765: 2322706}
[2026-01-09 04:11:26] 2026-01-09 09:10:43,913 | INFO     | --------------------------------------------------
[2026-01-09 04:11:26] 2026-01-09 09:10:43,914 | INFO     | 
[2026-01-09 04:11:26] 2026-01-09 09:10:43,914 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 04:11:26] 2026-01-09 09:10:43,942 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,942 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,943 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,943 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,943 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,943 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,944 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,944 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,944 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,944 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,945 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,945 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,945 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,946 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 04:11:26] 2026-01-09 09:10:43,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,946 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 04:11:26] 2026-01-09 09:10:43,947 | INFO     | job 6963167520 has completed (purged errors)
[2026-01-09 04:11:26] 2026-01-09 09:10:43,947 | INFO     | overall cleanup function is called
[2026-01-09 04:11:26] 2026-01-09 09:10:44,955 | INFO     | --- collectZombieJob: --- 10, [15742]
[2026-01-09 04:11:26] 2026-01-09 09:10:44,955 | INFO     | zombie collector waiting for pid 15742
[2026-01-09 04:11:26] 2026-01-09 09:10:44,956 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 04:11:26] 2026-01-09 09:10:44,956 | INFO     | collected zombie processes
[2026-01-09 04:11:26] 2026-01-09 09:10:44,956 | INFO     | will attempt to kill all subprocesses of pid=15742
[2026-01-09 04:11:26] 2026-01-09 09:10:45,051 | INFO     | process IDs to be killed: [15742] (in reverse order)
[2026-01-09 04:11:26] 2026-01-09 09:10:45,104 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 04:11:26] 2026-01-09 09:10:45,105 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 04:11:26] 2026-01-09 09:10:45,109 | INFO     | did not find any defunct processes belonging to 15742
[2026-01-09 04:11:26] 2026-01-09 09:10:45,114 | INFO     | did not find any defunct processes belonging to 15742
[2026-01-09 04:11:26] 2026-01-09 09:10:45,114 | INFO     | ready for new job
[2026-01-09 04:11:26] 2026-01-09 09:10:45,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 04:11:26] 2026-01-09 09:10:45,116 | INFO     | ***************************************
[2026-01-09 04:11:26] 2026-01-09 09:10:45,116 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 04:11:26] 2026-01-09 09:10:45,117 | INFO     | ***************************************
[2026-01-09 04:11:26] 2026-01-09 09:10:45,117 | INFO     | 
[2026-01-09 04:11:26] 2026-01-09 09:10:45,117 | INFO     | architecture information:
[2026-01-09 04:11:26] 2026-01-09 09:10:45,118 | INFO     | executing command: cat /etc/os-release
[2026-01-09 04:11:26] 2026-01-09 09:10:45,137 | INFO     | cat /etc/os-release:
[2026-01-09 04:11:26] NAME="CentOS Linux"
[2026-01-09 04:11:26] VERSION="7 (Core)"
[2026-01-09 04:11:26] ID="centos"
[2026-01-09 04:11:26] ID_LIKE="rhel fedora"
[2026-01-09 04:11:26] VERSION_ID="7"
[2026-01-09 04:11:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 04:11:26] ANSI_COLOR="0;31"
[2026-01-09 04:11:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 04:11:26] HOME_URL="https://www.centos.org/"
[2026-01-09 04:11:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 04:11:26] 
[2026-01-09 04:11:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 04:11:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 04:11:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 04:11:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 04:11:26] 
[2026-01-09 04:11:26] 2026-01-09 09:10:45,137 | INFO     | ***************************************
[2026-01-09 04:11:26] 2026-01-09 09:10:45,640 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 04:11:26] 2026-01-09 09:10:45,661 | INFO     | sufficient remaining disk space (18498977792 B)
[2026-01-09 04:11:26] 2026-01-09 09:10:45,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 04:11:26] 2026-01-09 09:10:45,673 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 04:11:26] 2026-01-09 09:10:45,674 | INFO     | update_server=False
[2026-01-09 04:11:26] 2026-01-09 09:10:45,674 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 04:11:26] 2026-01-09 09:10:46,095 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 04:11:26] 2026-01-09 09:10:46,095 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 04:11:26] 2026-01-09 09:10:46,096 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 04:11:26] 2026-01-09 09:10:46,096 | INFO     | will abort loop
[2026-01-09 04:11:26] 2026-01-09 09:10:46,111 | INFO     | all payload control threads have been joined
[2026-01-09 04:11:26] 2026-01-09 09:10:46,186 | INFO     | all data control threads have been joined
[2026-01-09 04:11:26] 2026-01-09 09:10:46,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 04:11:26] 2026-01-09 09:10:46,675 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 04:11:26] 2026-01-09 09:10:46,680 | INFO     | [job] retrieve thread has finished
[2026-01-09 04:11:26] 2026-01-09 09:10:46,761 | INFO     | [job] validate thread has finished
[2026-01-09 04:11:26] 2026-01-09 09:10:46,768 | INFO     | [data] copytool_in thread has finished
[2026-01-09 04:11:26] 2026-01-09 09:10:46,839 | INFO     | all job control threads have been joined
[2026-01-09 04:11:26] 2026-01-09 09:10:47,028 | INFO     | [payload] validate_post thread has finished
[2026-01-09 04:11:26] 2026-01-09 09:10:47,101 | INFO     | [job] job monitor thread has finished
[2026-01-09 04:11:26] 2026-01-09 09:10:47,112 | INFO     | [payload] control thread has finished
[2026-01-09 04:11:26] 2026-01-09 09:10:47,191 | INFO     | [data] control thread has finished
[2026-01-09 04:11:26] 2026-01-09 09:10:47,233 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 04:11:26] 2026-01-09 09:10:47,441 | INFO     | [payload] failed_post thread has finished
[2026-01-09 04:11:26] 2026-01-09 09:10:47,684 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 04:11:26] 2026-01-09 09:10:47,687 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 04:11:26] 2026-01-09 09:10:47,845 | INFO     | [job] control thread has finished
[2026-01-09 04:11:26] 2026-01-09 09:10:47,871 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 04:11:26] 2026-01-09 09:10:48,601 | INFO     | [data] copytool_out thread has finished
[2026-01-09 04:11:26] 2026-01-09 09:10:48,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 04:11:26] 2026-01-09 09:10:49,641 | INFO     | [job] queue monitor thread has finished
[2026-01-09 04:11:26] 2026-01-09 09:10:50,681 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 04:11:26] 2026-01-09 09:11:00,104 [wrapper] supervise_pilot (15 min periods counter: 13)
[2026-01-09 04:11:26] 2026-01-09 09:11:16,684 | INFO     | PID=9264 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 04:11:26] 2026-01-09 09:11:16,684 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 04:11:26] 2026-01-09 09:11:16,684 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 04:11:26] 2026-01-09 09:11:16,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 04:11:26] 2026-01-09 09:11:19,082 | INFO     | [monitor] cgroup control has ended
[2026-01-09 04:11:26] 2026-01-09 09:11:21,049 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139959634548544)>', '<ExcThread(monitor, started 139959176500992)>']
[2026-01-09 04:11:26] 2026-01-09 09:11:21,710 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 04:11:26] 2026-01-09 09:11:21,710 | INFO     | [monitor] control thread has ended
[2026-01-09 04:11:26] 2026-01-09 09:11:26,053 | INFO     | all workflow threads have been joined
[2026-01-09 04:11:26] 2026-01-09 09:11:26,053 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 04:11:26] 2026-01-09 09:11:26,054 | INFO     | traces error code: 0
[2026-01-09 04:11:26] 2026-01-09 09:11:26,054 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 04:11:26] 2026-01-09 09:11:26,164 [wrapper] ==== pilot stdout END ====
[2026-01-09 04:11:26] 2026-01-09 09:11:26,169 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 04:11:26] 2026-01-09 09:11:26,173 [wrapper] pilotpid: 9264
[2026-01-09 04:11:26] 2026-01-09 09:11:26,178 [wrapper] Pilot exit status: 0
[2026-01-09 04:11:26] 2026-01-09 09:11:26,195 [wrapper] pandaids: 6963167520
[2026-01-09 04:11:26] 2026-01-09 09:11:26,239 [wrapper] cleanup supervisor_pilot 31897 9265
[2026-01-09 04:11:26] 2026-01-09 09:11:26,243 [wrapper] Test setup, not cleaning
[2026-01-09 04:11:26] 2026-01-09 09:11:26,248 [wrapper] apfmon messages muted
[2026-01-09 04:11:26] 2026-01-09 09:11:26,252 [wrapper] ==== wrapper stdout END ====
[2026-01-09 04:11:26] 2026-01-09 09:11:26,257 [wrapper] ==== wrapper stderr END ====
[2026-01-09 04:11:26]  *** Error codes and diagnostics ***
[2026-01-09 04:11:26]     "exeErrorCode": 0,
[2026-01-09 04:11:26]     "exeErrorDiag": "",
[2026-01-09 04:11:26]     "pilotErrorCode": 0,
[2026-01-09 04:11:26]     "pilotErrorDiag": "",
[2026-01-09 04:11:26]  *** Listing of results directory ***
[2026-01-09 04:11:26] total 444104
[2026-01-09 04:11:26] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 04:11:26] -rwx------ 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 04:11:26] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 19:57 queuedata.json
[2026-01-09 04:11:26] -rw-r--r-- 1 boincer umatlas       100 Jan  9 01:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 04:11:26] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 01:10 run_atlas
[2026-01-09 04:11:26] -rw-r--r-- 1 boincer umatlas       105 Jan  9 01:10 job.xml
[2026-01-09 04:11:26] -rw-r--r-- 2 boincer umatlas 225409879 Jan  9 01:10 EVNT.47898824._001327.pool.root.1
[2026-01-09 04:11:26] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 01:10 start_atlas.sh
[2026-01-09 04:11:26] drwxrwx--x 2 boincer umatlas      4096 Jan  9 01:10 shared
[2026-01-09 04:11:26] -rw-r--r-- 2 boincer umatlas    592399 Jan  9 01:10 input.tar.gz
[2026-01-09 04:11:26] -rw-r--r-- 1 boincer umatlas         0 Jan  9 01:10 boinc_lockfile
[2026-01-09 04:11:26] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 01:10 pandaJob.out
[2026-01-09 04:11:26] -rw------- 1 boincer umatlas        57 Jan  9 01:10 setup.sh.local
[2026-01-09 04:11:26] -rw------- 1 boincer umatlas    989771 Jan  9 01:10 agis_schedconf.cvmfs.json
[2026-01-09 04:11:26] -rw------- 1 boincer umatlas   1516240 Jan  9 01:11 agis_ddmendpoints.agis.ALL.json
[2026-01-09 04:11:26] drwx------ 5 boincer umatlas      4096 Jan  9 01:11 pilot3
[2026-01-09 04:11:26] -rw-r--r-- 1 boincer umatlas      5910 Jan  9 04:03 init_data.xml
[2026-01-09 04:11:26] -rw------- 1 boincer umatlas 221628676 Jan  9 04:09 HITS.47898826._035761.pool.root.1
[2026-01-09 04:11:26] -rw-r--r-- 1 boincer umatlas       531 Jan  9 04:10 boinc_task_state.xml
[2026-01-09 04:11:26] -rw------- 1 boincer umatlas      1050 Jan  9 04:10 memory_monitor_summary.json
[2026-01-09 04:11:26] -rw------- 1 boincer umatlas    411386 Jan  9 04:10 log.47898826._035761.job.log.tgz.1
[2026-01-09 04:11:26] -rw------- 1 boincer umatlas        95 Jan  9 04:10 pilot_heartbeat.json
[2026-01-09 04:11:26] -rw------- 1 boincer umatlas      7852 Jan  9 04:10 heartbeat.json
[2026-01-09 04:11:26] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 04:10 boinc_mmap_file
[2026-01-09 04:11:26] -rw-r--r-- 1 boincer umatlas        28 Jan  9 04:10 wrapper_checkpoint.txt
[2026-01-09 04:11:26] -rw------- 1 boincer umatlas      4931 Jan  9 04:11 pilotlog.txt
[2026-01-09 04:11:26] -rw------- 1 boincer umatlas   1493145 Jan  9 04:11 log.47898826._035761.job.log.1
[2026-01-09 04:11:26] -rw------- 1 boincer umatlas       357 Jan  9 04:11 output.list
[2026-01-09 04:11:26] -rw-r--r-- 1 boincer umatlas       620 Jan  9 04:11 runtime_log
[2026-01-09 04:11:26] -rw------- 1 boincer umatlas   1925120 Jan  9 04:11 result.tar.gz
[2026-01-09 04:11:26] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 04:11 runtime_log.err
[2026-01-09 04:11:26] -rw------- 1 boincer umatlas       663 Jan  9 04:11 NakKDmpzFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1agKDmlr4WYn.diag
[2026-01-09 04:11:26] -rw-r--r-- 1 boincer umatlas     21109 Jan  9 04:11 stderr.txt
[2026-01-09 04:11:26] HITS file was successfully produced:
[2026-01-09 04:11:26] -rw------- 1 boincer umatlas 221628676 Jan  9 04:09 shared/HITS.pool.root.1
[2026-01-09 04:11:26]  *** Contents of shared directory: ***
[2026-01-09 04:11:26] total 439044
[2026-01-09 04:11:26] -rw-r--r-- 2 boincer umatlas 225409879 Jan  9 01:10 ATLAS.root_0
[2026-01-09 04:11:26] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 01:10 start_atlas.sh
[2026-01-09 04:11:26] -rw-r--r-- 2 boincer umatlas    592399 Jan  9 01:10 input.tar.gz
[2026-01-09 04:11:26] -rw------- 1 boincer umatlas 221628676 Jan  9 04:09 HITS.pool.root.1
[2026-01-09 04:11:26] -rw------- 1 boincer umatlas   1925120 Jan  9 04:11 result.tar.gz
04:11:27 (5587): run_atlas exited; CPU time 79105.493485
04:11:27 (5587): called boinc_finish(0)

</stderr_txt>
]]>

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