Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:56:01 (1786434): wrapper (7.7.26015): starting
10:56:01 (1786434): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 10:56:01] Arguments: --nthreads 4
[2026-01-09 10:56:01] Threads: 4
[2026-01-09 10:56:01] Checking for CVMFS
[2026-01-09 10:56:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:56:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:56:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:56:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:56:02] 2.13.1.0 57563 2466 77200 154938 0 188 10194095 10240000 1822 130560 0 4536007 99.996 91983 326 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-09 10:56:02] CVMFS is ok
[2026-01-09 10:56:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:56:02] Checking for apptainer binary...
[2026-01-09 10:56:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:56:02] Running /usr/bin/apptainer --version
[2026-01-09 10:56:02] apptainer version 1.4.5
[2026-01-09 10:56:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:56:02] atlas7l2
[2026-01-09 10:56:02] apptainer works
[2026-01-09 10:56:02] Set ATHENA_PROC_NUMBER=4
[2026-01-09 10:56:02] Set ATHENA_CORE_NUMBER=4
[2026-01-09 10:56:02] Starting ATLAS job with PandaID=6963167092
[2026-01-09 10:56:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:56:48]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:56:48] 2026-01-09 11:56:12,466 | INFO     | monitor loop #550: job 0:6963167092 is in state 'finished'
[2026-01-09 12:56:48] 2026-01-09 11:56:12,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:56:48] 2026-01-09 11:56:13,181 | INFO     | time since job start (7205s) is within the limit (349056.0s)
[2026-01-09 12:56:48] 2026-01-09 11:56:14,969 | INFO     | monitor loop #551: job 0:6963167092 is in state 'finished'
[2026-01-09 12:56:48] 2026-01-09 11:56:14,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:56:48] 2026-01-09 11:56:15,186 | INFO     | time since job start (7207s) is within the limit (349056.0s)
[2026-01-09 12:56:48] 2026-01-09 11:56:15,777 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 12:56:48] 2026-01-09 11:56:15,778 | INFO     | found 16 cores (1 core per socket, 16 sockets) , CPU MHz: 2400.0
[2026-01-09 12:56:48] 2026-01-09 11:56:15,780 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6963167092/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:56:48] 2026-01-09 11:56:15,780 | INFO     | extracted standard info from prmon json
[2026-01-09 12:56:48] 2026-01-09 11:56:15,780 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:56:48] 2026-01-09 11:56:15,780 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:56:48] 2026-01-09 11:56:15,780 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:56:48] 2026-01-09 11:56:15,780 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:56:48] 2026-01-09 11:56:15,782 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:56:48] 2026-01-09 11:56:15,782 | INFO     | sum of square deviations: 509440249.5
[2026-01-09 12:56:48] 2026-01-09 11:56:15,782 | INFO     | sum of deviations: 14942656349.500002
[2026-01-09 12:56:48] 2026-01-09 11:56:15,782 | INFO     | mean x: 1767956157.5
[2026-01-09 12:56:48] 2026-01-09 11:56:15,782 | INFO     | mean y: 2295996.5677966103
[2026-01-09 12:56:48] 2026-01-09 11:56:15,782 | INFO     | intersect: -51854543600.290565
[2026-01-09 12:56:48] 2026-01-09 11:56:15,783 | INFO     | chi2: 1.7257029840570561
[2026-01-09 12:56:48] 2026-01-09 11:56:15,783 | INFO     | sum of square deviations: 447383272.0
[2026-01-09 12:56:48] 2026-01-09 11:56:15,783 | INFO     | sum of deviations: 14310933364.999998
[2026-01-09 12:56:48] 2026-01-09 11:56:15,783 | INFO     | mean x: 1767956005.0
[2026-01-09 12:56:48] 2026-01-09 11:56:15,783 | INFO     | mean y: 2294443.2300884956
[2026-01-09 12:56:48] 2026-01-09 11:56:15,783 | INFO     | intersect: -56551229488.72105
[2026-01-09 12:56:48] 2026-01-09 11:56:15,783 | INFO     | chi2: 1.7291737885753187
[2026-01-09 12:56:48] 2026-01-09 11:56:15,783 | INFO     | current chi2=1.7291737885753187 (change=-0.2011240955325244 %)
[2026-01-09 12:56:48] 2026-01-09 11:56:15,783 | INFO     | right removable region: 112
[2026-01-09 12:56:48] 2026-01-09 11:56:15,784 | INFO     | sum of square deviations: 447383272.0
[2026-01-09 12:56:48] 2026-01-09 11:56:15,784 | INFO     | sum of deviations: -3702896175.999999
[2026-01-09 12:56:48] 2026-01-09 11:56:15,784 | INFO     | mean x: 1767956310.0
[2026-01-09 12:56:48] 2026-01-09 11:56:15,784 | INFO     | mean y: 2341016.5132743362
[2026-01-09 12:56:48] 2026-01-09 11:56:15,784 | INFO     | intersect: 14635339318.770021
[2026-01-09 12:56:48] 2026-01-09 11:56:15,784 | INFO     | chi2: 0.021527211587246017
[2026-01-09 12:56:48] 2026-01-09 11:56:15,784 | INFO     | current chi2=0.021527211587246017 (change=98.75255407297051 %)
[2026-01-09 12:56:48] 2026-01-09 11:56:15,784 | INFO     | sum of square deviations: 390582207.0
[2026-01-09 12:56:48] 2026-01-09 11:56:15,785 | INFO     | sum of deviations: -3049364075.0
[2026-01-09 12:56:48] 2026-01-09 11:56:15,785 | INFO     | mean x: 1767956462.5
[2026-01-09 12:56:48] 2026-01-09 11:56:15,785 | INFO     | mean y: 2339209.962962963
[2026-01-09 12:56:48] 2026-01-09 11:56:15,785 | INFO     | intersect: 13805177194.622066
[2026-01-09 12:56:48] 2026-01-09 11:56:15,785 | INFO     | chi2: 0.018475429879111223
[2026-01-09 12:56:48] 2026-01-09 11:56:15,785 | INFO     | current chi2=0.018475429879111223 (change=14.176391102797764 %)
[2026-01-09 12:56:48] 2026-01-09 11:56:15,785 | INFO     | left removable region: 20
[2026-01-09 12:56:48] 2026-01-09 11:56:15,785 | INFO     | sum of square deviations: 241429643.0
[2026-01-09 12:56:48] 2026-01-09 11:56:15,785 | INFO     | sum of deviations: 345777554.4999999
[2026-01-09 12:56:48] 2026-01-09 11:56:15,785 | INFO     | mean x: 1767956584.5
[2026-01-09 12:56:48] 2026-01-09 11:56:15,785 | INFO     | mean y: 2328333.4239130435
[2026-01-09 12:56:48] 2026-01-09 11:56:15,785 | INFO     | intersect: -2529753877.5852065
[2026-01-09 12:56:48] 2026-01-09 11:56:15,785 | INFO     | chi2: 0.0007244472651251585
[2026-01-09 12:56:48] 2026-01-09 11:56:15,786 | INFO     | current memory leak: 1.43 B/s (using 92 data points, chi2=0.00)
[2026-01-09 12:56:48] 2026-01-09 11:56:15,786 | INFO     | could have reported an average CPU frequency of 2400 MHz (7 samples)
[2026-01-09 12:56:48] 2026-01-09 11:56:15,786 | INFO     | ..............................
[2026-01-09 12:56:48] 2026-01-09 11:56:15,786 | INFO     | . Timing measurements:
[2026-01-09 12:56:48] 2026-01-09 11:56:15,786 | INFO     | . get job = 0 s
[2026-01-09 12:56:48] 2026-01-09 11:56:15,786 | INFO     | . initial setup = 1 s
[2026-01-09 12:56:48] 2026-01-09 11:56:15,786 | INFO     | . payload setup = 3 s
[2026-01-09 12:56:48] 2026-01-09 11:56:15,786 | INFO     | . stage-in = 0 s
[2026-01-09 12:56:48] 2026-01-09 11:56:15,786 | INFO     | . payload execution = 7178 s
[2026-01-09 12:56:48] 2026-01-09 11:56:15,786 | INFO     | . stage-out = 0 s
[2026-01-09 12:56:48] 2026-01-09 11:56:15,786 | INFO     | . log creation = 0 s
[2026-01-09 12:56:48] 2026-01-09 11:56:15,786 | INFO     | ..............................
[2026-01-09 12:56:48] 2026-01-09 11:56:15,833 | INFO     | 
[2026-01-09 12:56:48] 2026-01-09 11:56:15,833 | INFO     | job summary report
[2026-01-09 12:56:48] 2026-01-09 11:56:15,833 | INFO     | --------------------------------------------------
[2026-01-09 12:56:48] 2026-01-09 11:56:15,833 | INFO     | PanDA job id: 6963167092
[2026-01-09 12:56:48] 2026-01-09 11:56:15,833 | INFO     | task id: 47898826
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | errors: (none)
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | pilot state: finished 
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | transexitcode: 0
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | exeerrorcode: 0
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | exeerrordiag: 
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | exitcode: 0
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | exitmsg: OK
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | cpuconsumptiontime: 27528 s
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | nevents: 400
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | neventsw: 0
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | pid: 1796774
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | pgrp: 1796774
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | corecount: 4
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | event service: False
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | sizes: {0: 2283984, 2: 2284246, 11: 2284274, 7184: 2311672, 7186: 2320698, 7189: 2320754, 7193: 2321076}
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | --------------------------------------------------
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | 
[2026-01-09 12:56:48] 2026-01-09 11:56:15,834 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2026-01-09 12:56:48] 2026-01-09 11:56:15,846 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,846 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,846 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,846 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,846 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,846 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,847 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,847 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,847 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,847 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,847 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,847 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:56:48] 2026-01-09 11:56:15,847 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,847 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:56:48] 2026-01-09 11:56:15,847 | INFO     | job 6963167092 has completed (purged errors)
[2026-01-09 12:56:48] 2026-01-09 11:56:15,847 | INFO     | overall cleanup function is called
[2026-01-09 12:56:48] 2026-01-09 11:56:16,851 | INFO     | --- collectZombieJob: --- 10, [1796774]
[2026-01-09 12:56:48] 2026-01-09 11:56:16,851 | INFO     | zombie collector waiting for pid 1796774
[2026-01-09 12:56:48] 2026-01-09 11:56:16,851 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:56:48] 2026-01-09 11:56:16,851 | INFO     | collected zombie processes
[2026-01-09 12:56:48] 2026-01-09 11:56:16,851 | INFO     | will attempt to kill all subprocesses of pid=1796774
[2026-01-09 12:56:48] 2026-01-09 11:56:16,940 | INFO     | process IDs to be killed: [1796774] (in reverse order)
[2026-01-09 12:56:48] 2026-01-09 11:56:16,968 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:56:48] 2026-01-09 11:56:16,968 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:56:48] 2026-01-09 11:56:16,970 | INFO     | did not find any defunct processes belonging to 1796774
[2026-01-09 12:56:48] 2026-01-09 11:56:16,972 | INFO     | did not find any defunct processes belonging to 1796774
[2026-01-09 12:56:48] 2026-01-09 11:56:16,972 | INFO     | ready for new job
[2026-01-09 12:56:48] 2026-01-09 11:56:16,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:56:48] 2026-01-09 11:56:16,973 | INFO     | ***************************************
[2026-01-09 12:56:48] 2026-01-09 11:56:16,974 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:56:48] 2026-01-09 11:56:16,974 | INFO     | ***************************************
[2026-01-09 12:56:48] 2026-01-09 11:56:16,974 | INFO     | 
[2026-01-09 12:56:48] 2026-01-09 11:56:16,974 | INFO     | pilot is running in a VM
[2026-01-09 12:56:48] 2026-01-09 11:56:16,974 | INFO     | architecture information:
[2026-01-09 12:56:48] 2026-01-09 11:56:16,974 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:56:48] 2026-01-09 11:56:16,982 | INFO     | cat /etc/os-release:
[2026-01-09 12:56:48] NAME="CentOS Linux"
[2026-01-09 12:56:48] VERSION="7 (Core)"
[2026-01-09 12:56:48] ID="centos"
[2026-01-09 12:56:48] ID_LIKE="rhel fedora"
[2026-01-09 12:56:48] VERSION_ID="7"
[2026-01-09 12:56:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:56:48] ANSI_COLOR="0;31"
[2026-01-09 12:56:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:56:48] HOME_URL="https://www.centos.org/"
[2026-01-09 12:56:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:56:48] 
[2026-01-09 12:56:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:56:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:56:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:56:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:56:48] 
[2026-01-09 12:56:48] 2026-01-09 11:56:16,982 | INFO     | ***************************************
[2026-01-09 12:56:48] 2026-01-09 11:56:17,484 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2026-01-09 12:56:48] 2026-01-09 11:56:17,493 | INFO     | sufficient remaining disk space (167615922176 B)
[2026-01-09 12:56:48] 2026-01-09 11:56:17,493 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:56:48] 2026-01-09 11:56:17,493 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:56:48] 2026-01-09 11:56:17,494 | INFO     | update_server=False
[2026-01-09 12:56:48] 2026-01-09 11:56:17,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:56:48] 2026-01-09 11:56:17,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:56:48] 2026-01-09 11:56:17,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:56:48] 2026-01-09 11:56:17,949 | INFO     | all payload control threads have been joined
[2026-01-09 12:56:48] 2026-01-09 11:56:18,335 | INFO     | all job control threads have been joined
[2026-01-09 12:56:48] 2026-01-09 11:56:18,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:56:48] 2026-01-09 11:56:18,478 | INFO     | aborting loop
[2026-01-09 12:56:48] 2026-01-09 11:56:18,479 | INFO     | all data control threads have been joined
[2026-01-09 12:56:48] 2026-01-09 11:56:18,496 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:56:48] 2026-01-09 11:56:18,498 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:56:48] 2026-01-09 11:56:18,718 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:56:48] 2026-01-09 11:56:18,798 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:56:48] 2026-01-09 11:56:18,855 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:56:48] 2026-01-09 11:56:18,954 | INFO     | [payload] control thread has finished
[2026-01-09 12:56:48] 2026-01-09 11:56:18,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:56:48] 2026-01-09 11:56:19,226 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:56:48] 2026-01-09 11:56:19,334 | INFO     | [job] validate thread has finished
[2026-01-09 12:56:48] 2026-01-09 11:56:19,341 | INFO     | [job] control thread has finished
[2026-01-09 12:56:48] 2026-01-09 11:56:19,482 | INFO     | [data] control thread has finished
[2026-01-09 12:56:48] 2026-01-09 11:56:19,483 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:56:48] 2026-01-09 11:56:19,487 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:56:48] 2026-01-09 11:56:19,552 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:56:48] 2026-01-09 11:56:19,580 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:56:48] 2026-01-09 11:56:20,993 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:56:48] 2026-01-09 11:56:21,737 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:56:48] 2026-01-09 11:56:28,067 | INFO     | job.realtimelogging is not enabled
[2026-01-09 12:56:48] 2026-01-09 11:56:29,068 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:56:48] 2026-01-09 11:56:29,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124809432942400)>', '<ExcThread(monitor, started 124808729720576)>']
[2026-01-09 12:56:48] 2026-01-09 11:56:34,281 | INFO     | all workflow threads have been joined
[2026-01-09 12:56:48] 2026-01-09 11:56:34,282 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:56:48] 2026-01-09 11:56:34,282 | INFO     | traces error code: 0
[2026-01-09 12:56:48] 2026-01-09 11:56:34,282 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:56:48] 2026-01-09 11:56:48,372 | INFO     | PID=1790226 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 12:56:48] 2026-01-09 11:56:48,372 | INFO     | .. there are 3 such processes running
[2026-01-09 12:56:48] 2026-01-09 11:56:48,372 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:56:48] 2026-01-09 11:56:48,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:56:48] 2026-01-09 11:56:48,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:56:48] 2026-01-09 11:56:48,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:56:48] 2026-01-09 11:56:48,372 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 12:56:48] 2026-01-09 11:56:48,372 | INFO     | [monitor] control thread has ended
[2026-01-09 12:56:48] 2026-01-09 11:56:48,441 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:56:48] 2026-01-09 11:56:48,445 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:56:48] 2026-01-09 11:56:48,447 [wrapper] pilotpid: 1790226
[2026-01-09 12:56:48] 2026-01-09 11:56:48,449 [wrapper] Pilot exit status: 0
[2026-01-09 12:56:48] 2026-01-09 11:56:48,462 [wrapper] pandaids: 6963167092
[2026-01-09 12:56:48] 2026-01-09 11:56:48,488 [wrapper] cleanup supervisor_pilot 1869909 1790227
[2026-01-09 12:56:48] 2026-01-09 11:56:48,491 [wrapper] Test setup, not cleaning
[2026-01-09 12:56:48] 2026-01-09 11:56:48,495 [wrapper] apfmon messages muted
[2026-01-09 12:56:48] 2026-01-09 11:56:48,497 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:56:48] 2026-01-09 11:56:48,501 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:56:48]  *** Error codes and diagnostics ***
[2026-01-09 12:56:48]     "exeErrorCode": 0,
[2026-01-09 12:56:48]     "exeErrorDiag": "",
[2026-01-09 12:56:48]     "pilotErrorCode": 0,
[2026-01-09 12:56:48]     "pilotErrorDiag": "",
[2026-01-09 12:56:48]  *** Listing of results directory ***
[2026-01-09 12:56:48] insgesamt 431944
[2026-01-09 12:56:48] -rw-r--r-- 1 yeti boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 12:56:48] -rwx------ 1 yeti boinc     36322 Jan  9 01:57 runpilot2-wrapper.sh
[2026-01-09 12:56:48] -rw-r--r-- 1 yeti boinc      5112 Jan  9 01:57 queuedata.json
[2026-01-09 12:56:48] -rw-r--r-- 1 yeti boinc       100 Jan  9 10:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:56:48] -rwxr-xr-x 1 yeti boinc      7986 Jan  9 10:56 run_atlas
[2026-01-09 12:56:48] -rw-r--r-- 1 yeti boinc       105 Jan  9 10:56 job.xml
[2026-01-09 12:56:48] -rw-r--r-- 2 yeti boinc    592394 Jan  9 10:56 input.tar.gz
[2026-01-09 12:56:48] -rw-r--r-- 2 yeti boinc 222657257 Jan  9 10:56 EVNT.47898824._001374.pool.root.1
[2026-01-09 12:56:48] -rw-r--r-- 2 yeti boinc     15847 Jan  9 10:56 start_atlas.sh
[2026-01-09 12:56:48] drwxrwx--x 2 yeti boinc      4096 Jan  9 10:56 shared
[2026-01-09 12:56:48] -rw-r--r-- 1 yeti boinc      6615 Jan  9 10:56 init_data.xml
[2026-01-09 12:56:48] -rw-r--r-- 1 yeti boinc         0 Jan  9 10:56 boinc_setup_complete
[2026-01-09 12:56:48] -rw-r--r-- 1 yeti boinc         0 Jan  9 10:56 boinc_lockfile
[2026-01-09 12:56:48] -rw-r--r-- 1 yeti boinc      2519 Jan  9 10:56 pandaJob.out
[2026-01-09 12:56:48] -rw------- 1 yeti boinc        52 Jan  9 10:56 setup.sh.local
[2026-01-09 12:56:48] -rw------- 1 yeti boinc    989751 Jan  9 10:56 agis_schedconf.cvmfs.json
[2026-01-09 12:56:48] -rw------- 1 yeti boinc   1516240 Jan  9 10:56 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:56:48] drwx------ 5 yeti boinc      4096 Jan  9 10:56 pilot3
[2026-01-09 12:56:48] -rw-r--r-- 1 yeti boinc       530 Jan  9 12:55 boinc_task_state.xml
[2026-01-09 12:56:48] -rw------- 1 yeti boinc 212990554 Jan  9 12:55 HITS.47898826._035467.pool.root.1
[2026-01-09 12:56:48] -rw------- 1 yeti boinc        95 Jan  9 12:56 pilot_heartbeat.json
[2026-01-09 12:56:48] -rw------- 1 yeti boinc      1022 Jan  9 12:56 memory_monitor_summary.json
[2026-01-09 12:56:48] -rw------- 1 yeti boinc    310629 Jan  9 12:56 log.47898826._035467.job.log.tgz.1
[2026-01-09 12:56:48] -rw------- 1 yeti boinc      7767 Jan  9 12:56 heartbeat.json
[2026-01-09 12:56:48] -rw-r--r-- 1 yeti boinc        27 Jan  9 12:56 wrapper_checkpoint.txt
[2026-01-09 12:56:48] -rw-r--r-- 1 yeti boinc      8192 Jan  9 12:56 boinc_mmap_file
[2026-01-09 12:56:48] -rw------- 1 yeti boinc       892 Jan  9 12:56 pilotlog.txt
[2026-01-09 12:56:48] -rw------- 1 yeti boinc   1065890 Jan  9 12:56 log.47898826._035467.job.log.1
[2026-01-09 12:56:48] -rw------- 1 yeti boinc       357 Jan  9 12:56 output.list
[2026-01-09 12:56:48] -rw-r--r-- 1 yeti boinc       620 Jan  9 12:56 runtime_log
[2026-01-09 12:56:48] -rw------- 1 yeti boinc   1392640 Jan  9 12:56 result.tar.gz
[2026-01-09 12:56:48] -rw-r--r-- 1 yeti boinc      9545 Jan  9 12:56 runtime_log.err
[2026-01-09 12:56:48] -rw------- 1 yeti boinc       639 Jan  9 12:56 a3LLDmczFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqolKDmzQxVUm.diag
[2026-01-09 12:56:48] -rw-r--r-- 1 yeti boinc     20947 Jan  9 12:56 stderr.txt
[2026-01-09 12:56:48] HITS file was successfully produced:
[2026-01-09 12:56:48] -rw------- 1 yeti boinc 212990554 Jan  9 12:55 shared/HITS.pool.root.1
[2026-01-09 12:56:48]  *** Contents of shared directory: ***
[2026-01-09 12:56:48] insgesamt 427404
[2026-01-09 12:56:48] -rw-r--r-- 2 yeti boinc    592394 Jan  9 10:56 input.tar.gz
[2026-01-09 12:56:48] -rw-r--r-- 2 yeti boinc 222657257 Jan  9 10:56 ATLAS.root_0
[2026-01-09 12:56:48] -rw-r--r-- 2 yeti boinc     15847 Jan  9 10:56 start_atlas.sh
[2026-01-09 12:56:48] -rw------- 1 yeti boinc 212990554 Jan  9 12:55 HITS.pool.root.1
[2026-01-09 12:56:48] -rw------- 1 yeti boinc   1392640 Jan  9 12:56 result.tar.gz
12:56:50 (1786434): run_atlas exited; CPU time 27621.376220
12:56:50 (1786434): called boinc_finish(0)

</stderr_txt>
]]>

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