Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:16:38 (17171): wrapper (7.7.26015): starting
01:16:38 (17171): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 01:16:38] Arguments: --nthreads 8
[2026-01-09 01:16:38] Threads: 8
[2026-01-09 01:16:38] Checking for CVMFS
[2026-01-09 01:16:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 01:16:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 01:16:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 01:16:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 01:16:39] 2.11.2.0 28705 180831 140052 154934 1 101 10972893 18432000 1850 130560 0 121331487 99.979 7070303 33937 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 01:16:39] CVMFS is ok
[2026-01-09 01:16:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 01:16:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 01:16:39] Further information can be found at the LHC@home message board.
[2026-01-09 01:16:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 01:16:39] Checking for apptainer binary...
[2026-01-09 01:16:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 01:16:39] Running /usr/bin/apptainer --version
[2026-01-09 01:16:39] apptainer version 1.3.2-1.el7
[2026-01-09 01:16:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 01:16:39] c-206-27.aglt2.org
[2026-01-09 01:16:39] apptainer works
[2026-01-09 01:16:39] Set ATHENA_PROC_NUMBER=8
[2026-01-09 01:16:39] Set ATHENA_CORE_NUMBER=8
[2026-01-09 01:16:40] Starting ATLAS job with PandaID=6963167085
[2026-01-09 01:16:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:39:22]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:39:22] 2026-01-09 10:38:20,354 | INFO     | monitor loop #1130: job 0:6963167085 is in state 'finished'
[2026-01-09 05:39:22] 2026-01-09 10:38:20,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:39:22] 2026-01-09 10:38:22,343 | INFO     | time since job start (15692s) is within the limit (349056.0s)
[2026-01-09 05:39:22] 2026-01-09 10:38:22,859 | INFO     | monitor loop #1131: job 0:6963167085 is in state 'finished'
[2026-01-09 05:39:22] 2026-01-09 10:38:22,859 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:39:22] 2026-01-09 10:38:23,274 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 05:39:22] 2026-01-09 10:38:23,281 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2439.125
[2026-01-09 05:39:22] 2026-01-09 10:38:23,285 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963167085/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 05:39:22] 2026-01-09 10:38:23,286 | INFO     | extracted standard info from prmon json
[2026-01-09 05:39:22] 2026-01-09 10:38:23,286 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 05:39:22] 2026-01-09 10:38:23,286 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 05:39:22] 2026-01-09 10:38:23,287 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 05:39:22] 2026-01-09 10:38:23,287 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 05:39:22] 2026-01-09 10:38:23,294 | INFO     | fitting pss+swap vs Time
[2026-01-09 05:39:22] 2026-01-09 10:38:23,295 | INFO     | sum of square deviations: 5263458688.0
[2026-01-09 05:39:22] 2026-01-09 10:38:23,297 | INFO     | sum of deviations: -24551409381.0
[2026-01-09 05:39:22] 2026-01-09 10:38:23,298 | INFO     | mean x: 1767947241.0
[2026-01-09 05:39:22] 2026-01-09 10:38:23,298 | INFO     | mean y: 2527909.813229572
[2026-01-09 05:39:22] 2026-01-09 10:38:23,298 | INFO     | intersect: 8249119941.923138
[2026-01-09 05:39:22] 2026-01-09 10:38:23,299 | INFO     | chi2: 1.4229532626353474
[2026-01-09 05:39:22] 2026-01-09 10:38:23,299 | INFO     | sum of square deviations: 4962187923.0
[2026-01-09 05:39:22] 2026-01-09 10:38:23,302 | INFO     | sum of deviations: -23747508254.0
[2026-01-09 05:39:22] 2026-01-09 10:38:23,302 | INFO     | mean x: 1767947088.5
[2026-01-09 05:39:22] 2026-01-09 10:38:23,302 | INFO     | mean y: 2528316.793650794
[2026-01-09 05:39:22] 2026-01-09 10:38:23,302 | INFO     | intersect: 8463380410.320664
[2026-01-09 05:39:22] 2026-01-09 10:38:23,303 | INFO     | chi2: 1.4221077863154903
[2026-01-09 05:39:22] 2026-01-09 10:38:23,303 | INFO     | current chi2=1.4221077863154903 (change=0.05941701263548546 %)
[2026-01-09 05:39:22] 2026-01-09 10:38:23,303 | INFO     | right removable region: 251
[2026-01-09 05:39:22] 2026-01-09 10:38:23,304 | INFO     | sum of square deviations: 4962187923.0
[2026-01-09 05:39:22] 2026-01-09 10:38:23,306 | INFO     | sum of deviations: -58184407444.99999
[2026-01-09 05:39:22] 2026-01-09 10:38:23,306 | INFO     | mean x: 1767947393.5
[2026-01-09 05:39:22] 2026-01-09 10:38:23,306 | INFO     | mean y: 2544776.0317460317
[2026-01-09 05:39:22] 2026-01-09 10:38:23,307 | INFO     | intersect: 20732709187.568024
[2026-01-09 05:39:22] 2026-01-09 10:38:23,307 | INFO     | chi2: 0.20245477204635096
[2026-01-09 05:39:22] 2026-01-09 10:38:23,307 | INFO     | current chi2=0.20245477204635096 (change=85.77221210544896 %)
[2026-01-09 05:39:22] 2026-01-09 10:38:23,308 | INFO     | sum of square deviations: 4672638308.0
[2026-01-09 05:39:22] 2026-01-09 10:38:23,310 | INFO     | sum of deviations: -58013191059.0
[2026-01-09 05:39:22] 2026-01-09 10:38:23,310 | INFO     | mean x: 1767947546.0
[2026-01-09 05:39:22] 2026-01-09 10:38:23,311 | INFO     | mean y: 2544657.777327935
[2026-01-09 05:39:22] 2026-01-09 10:38:23,311 | INFO     | intersect: 21952516388.477825
[2026-01-09 05:39:22] 2026-01-09 10:38:23,311 | INFO     | chi2: 0.18279129603356137
[2026-01-09 05:39:22] 2026-01-09 10:38:23,312 | INFO     | current chi2=0.18279129603356137 (change=9.712527797708685 %)
[2026-01-09 05:39:22] 2026-01-09 10:38:23,312 | INFO     | left removable region: 20
[2026-01-09 05:39:22] 2026-01-09 10:38:23,312 | INFO     | sum of square deviations: 3822136780.0
[2026-01-09 05:39:22] 2026-01-09 10:38:23,314 | INFO     | sum of deviations: -44242581603.0
[2026-01-09 05:39:22] 2026-01-09 10:38:23,315 | INFO     | mean x: 1767947668.0
[2026-01-09 05:39:22] 2026-01-09 10:38:23,315 | INFO     | mean y: 2538452.935064935
[2026-01-09 05:39:22] 2026-01-09 10:38:23,315 | INFO     | intersect: 20467156407.116062
[2026-01-09 05:39:22] 2026-01-09 10:38:23,316 | INFO     | chi2: 0.17090541469452916
[2026-01-09 05:39:22] 2026-01-09 10:38:23,316 | INFO     | current memory leak: -11.58 B/s (using 231 data points, chi2=0.17)
[2026-01-09 05:39:22] 2026-01-09 10:38:23,316 | INFO     | could have reported an average CPU frequency of 2495 MHz (12 samples)
[2026-01-09 05:39:22] 2026-01-09 10:38:23,317 | INFO     | ..............................
[2026-01-09 05:39:22] 2026-01-09 10:38:23,317 | INFO     | . Timing measurements:
[2026-01-09 05:39:22] 2026-01-09 10:38:23,317 | INFO     | . get job = 0 s
[2026-01-09 05:39:22] 2026-01-09 10:38:23,317 | INFO     | . initial setup = 2 s
[2026-01-09 05:39:22] 2026-01-09 10:38:23,317 | INFO     | . payload setup = 4 s
[2026-01-09 05:39:22] 2026-01-09 10:38:23,317 | INFO     | . stage-in = 0 s
[2026-01-09 05:39:22] 2026-01-09 10:38:23,318 | INFO     | . payload execution = 15664 s
[2026-01-09 05:39:22] 2026-01-09 10:38:23,318 | INFO     | . stage-out = 2 s
[2026-01-09 05:39:22] 2026-01-09 10:38:23,318 | INFO     | . log creation = 0 s
[2026-01-09 05:39:22] 2026-01-09 10:38:23,318 | INFO     | ..............................
[2026-01-09 05:39:22] 2026-01-09 10:38:23,476 | INFO     | 
[2026-01-09 05:39:22] 2026-01-09 10:38:23,476 | INFO     | job summary report
[2026-01-09 05:39:22] 2026-01-09 10:38:23,476 | INFO     | --------------------------------------------------
[2026-01-09 05:39:22] 2026-01-09 10:38:23,476 | INFO     | PanDA job id: 6963167085
[2026-01-09 05:39:22] 2026-01-09 10:38:23,477 | INFO     | task id: 47898826
[2026-01-09 05:39:22] 2026-01-09 10:38:23,477 | INFO     | errors: (none)
[2026-01-09 05:39:22] 2026-01-09 10:38:23,477 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:39:22] 2026-01-09 10:38:23,477 | INFO     | pilot state: finished 
[2026-01-09 05:39:22] 2026-01-09 10:38:23,478 | INFO     | transexitcode: 0
[2026-01-09 05:39:22] 2026-01-09 10:38:23,478 | INFO     | exeerrorcode: 0
[2026-01-09 05:39:22] 2026-01-09 10:38:23,478 | INFO     | exeerrordiag: 
[2026-01-09 05:39:22] 2026-01-09 10:38:23,478 | INFO     | exitcode: 0
[2026-01-09 05:39:22] 2026-01-09 10:38:23,478 | INFO     | exitmsg: OK
[2026-01-09 05:39:22] 2026-01-09 10:38:23,479 | INFO     | cpuconsumptiontime: 120124 s
[2026-01-09 05:39:22] 2026-01-09 10:38:23,479 | INFO     | nevents: 400
[2026-01-09 05:39:22] 2026-01-09 10:38:23,479 | INFO     | neventsw: 0
[2026-01-09 05:39:22] 2026-01-09 10:38:23,479 | INFO     | pid: 27397
[2026-01-09 05:39:22] 2026-01-09 10:38:23,479 | INFO     | pgrp: 27397
[2026-01-09 05:39:22] 2026-01-09 10:38:23,480 | INFO     | corecount: 8
[2026-01-09 05:39:22] 2026-01-09 10:38:23,480 | INFO     | event service: False
[2026-01-09 05:39:22] 2026-01-09 10:38:23,480 | INFO     | sizes: {0: 2283143, 1: 2283999, 4: 2284261, 12: 2284289, 15672: 2315530, 15674: 2324528, 15675: 2324712, 15679: 2324906}
[2026-01-09 05:39:22] 2026-01-09 10:38:23,480 | INFO     | --------------------------------------------------
[2026-01-09 05:39:22] 2026-01-09 10:38:23,480 | INFO     | 
[2026-01-09 05:39:22] 2026-01-09 10:38:23,481 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 05:39:22] 2026-01-09 10:38:23,510 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,510 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,511 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,511 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,511 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,511 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,511 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,512 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,512 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,512 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,512 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,513 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,513 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,513 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,513 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,513 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:39:22] 2026-01-09 10:38:23,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,514 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:39:22] 2026-01-09 10:38:23,514 | INFO     | job 6963167085 has completed (purged errors)
[2026-01-09 05:39:22] 2026-01-09 10:38:23,514 | INFO     | overall cleanup function is called
[2026-01-09 05:39:22] 2026-01-09 10:38:23,658 | INFO     | PID=20913 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 05:39:22] 2026-01-09 10:38:23,658 | INFO     | .. there are 3 such processes running
[2026-01-09 05:39:22] 2026-01-09 10:38:24,523 | INFO     | --- collectZombieJob: --- 10, [27397]
[2026-01-09 05:39:22] 2026-01-09 10:38:24,523 | INFO     | zombie collector waiting for pid 27397
[2026-01-09 05:39:22] 2026-01-09 10:38:24,523 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:39:22] 2026-01-09 10:38:24,524 | INFO     | collected zombie processes
[2026-01-09 05:39:22] 2026-01-09 10:38:24,524 | INFO     | will attempt to kill all subprocesses of pid=27397
[2026-01-09 05:39:22] 2026-01-09 10:38:24,640 | INFO     | process IDs to be killed: [27397] (in reverse order)
[2026-01-09 05:39:22] 2026-01-09 10:38:24,701 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:39:22] 2026-01-09 10:38:24,701 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:39:22] 2026-01-09 10:38:24,707 | INFO     | did not find any defunct processes belonging to 27397
[2026-01-09 05:39:22] 2026-01-09 10:38:24,709 | INFO     | did not find any defunct processes belonging to 27397
[2026-01-09 05:39:22] 2026-01-09 10:38:24,710 | INFO     | ready for new job
[2026-01-09 05:39:22] 2026-01-09 10:38:24,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:39:22] 2026-01-09 10:38:24,711 | INFO     | ***************************************
[2026-01-09 05:39:22] 2026-01-09 10:38:24,711 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:39:22] 2026-01-09 10:38:24,711 | INFO     | ***************************************
[2026-01-09 05:39:22] 2026-01-09 10:38:24,712 | INFO     | 
[2026-01-09 05:39:22] 2026-01-09 10:38:24,712 | INFO     | architecture information:
[2026-01-09 05:39:22] 2026-01-09 10:38:24,713 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:39:22] 2026-01-09 10:38:24,750 | INFO     | cat /etc/os-release:
[2026-01-09 05:39:22] NAME="CentOS Linux"
[2026-01-09 05:39:22] VERSION="7 (Core)"
[2026-01-09 05:39:22] ID="centos"
[2026-01-09 05:39:22] ID_LIKE="rhel fedora"
[2026-01-09 05:39:22] VERSION_ID="7"
[2026-01-09 05:39:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:39:22] ANSI_COLOR="0;31"
[2026-01-09 05:39:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:39:22] HOME_URL="https://www.centos.org/"
[2026-01-09 05:39:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:39:22] 
[2026-01-09 05:39:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:39:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:39:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:39:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:39:22] 
[2026-01-09 05:39:22] 2026-01-09 10:38:24,750 | INFO     | ***************************************
[2026-01-09 05:39:22] 2026-01-09 10:38:25,251 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 05:39:22] 2026-01-09 10:38:25,267 | INFO     | sufficient remaining disk space (28338814976 B)
[2026-01-09 05:39:22] 2026-01-09 10:38:25,267 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:39:22] 2026-01-09 10:38:25,267 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:39:22] 2026-01-09 10:38:25,268 | INFO     | update_server=False
[2026-01-09 05:39:22] 2026-01-09 10:38:25,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:39:22] 2026-01-09 10:38:25,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:39:22] 2026-01-09 10:38:25,268 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:39:22] 2026-01-09 10:38:25,325 | INFO     | all job control threads have been joined
[2026-01-09 05:39:22] 2026-01-09 10:38:25,363 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 05:39:22] 2026-01-09 10:38:25,363 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 05:39:22] 2026-01-09 10:38:25,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:39:22] 2026-01-09 10:38:25,363 | INFO     | will abort loop
[2026-01-09 05:39:22] 2026-01-09 10:38:25,820 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:39:22] 2026-01-09 10:38:25,832 | INFO     | all data control threads have been joined
[2026-01-09 05:39:22] 2026-01-09 10:38:26,269 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:39:22] 2026-01-09 10:38:26,273 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:39:22] 2026-01-09 10:38:26,291 | INFO     | all payload control threads have been joined
[2026-01-09 05:39:22] 2026-01-09 10:38:26,330 | INFO     | [job] control thread has finished
[2026-01-09 05:39:22] 2026-01-09 10:38:26,363 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:39:22] 2026-01-09 10:38:26,369 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:39:22] 2026-01-09 10:38:26,672 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:39:22] 2026-01-09 10:38:26,820 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:39:22] 2026-01-09 10:38:26,837 | INFO     | [data] control thread has finished
[2026-01-09 05:39:22] 2026-01-09 10:38:26,953 | INFO     | [job] validate thread has finished
[2026-01-09 05:39:22] 2026-01-09 10:38:27,250 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:39:22] 2026-01-09 10:38:27,274 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:39:22] 2026-01-09 10:38:27,297 | INFO     | [payload] control thread has finished
[2026-01-09 05:39:22] 2026-01-09 10:38:27,447 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:39:22] 2026-01-09 10:38:27,580 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:39:22] 2026-01-09 10:38:27,727 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:39:22] 2026-01-09 10:38:29,827 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:39:22] 2026-01-09 10:38:55,910 | INFO     | PID=20913 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 05:39:22] 2026-01-09 10:38:55,910 | INFO     | .. there are 3 such processes running
[2026-01-09 05:39:22] 2026-01-09 10:38:55,910 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:39:22] 2026-01-09 10:38:55,910 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:39:22] 2026-01-09 10:38:55,911 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:39:22] 2026-01-09 10:39:15,722 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:39:22] 2026-01-09 10:39:16,811 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687298344768)>', '<ExcThread(monitor, started 140686468830976)>']
[2026-01-09 05:39:22] 2026-01-09 10:39:17,014 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:39:22] 2026-01-09 10:39:17,014 | INFO     | [monitor] control thread has ended
[2026-01-09 05:39:22] 2026-01-09 10:39:21,837 | INFO     | all workflow threads have been joined
[2026-01-09 05:39:22] 2026-01-09 10:39:21,837 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:39:22] 2026-01-09 10:39:21,857 | INFO     | traces error code: 0
[2026-01-09 05:39:22] 2026-01-09 10:39:21,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:39:22] 2026-01-09 10:39:21,984 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:39:22] 2026-01-09 10:39:21,986 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:39:22] 2026-01-09 10:39:21,988 [wrapper] pilotpid: 20913
[2026-01-09 05:39:22] 2026-01-09 10:39:21,990 [wrapper] Pilot exit status: 0
[2026-01-09 05:39:22] 2026-01-09 10:39:22,004 [wrapper] pandaids: 6963167085
[2026-01-09 05:39:22] 2026-01-09 10:39:22,032 [wrapper] cleanup supervisor_pilot   795 20914
[2026-01-09 05:39:22] 2026-01-09 10:39:22,034 [wrapper] Test setup, not cleaning
[2026-01-09 05:39:22] 2026-01-09 10:39:22,036 [wrapper] apfmon messages muted
[2026-01-09 05:39:22] 2026-01-09 10:39:22,039 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:39:22] 2026-01-09 10:39:22,041 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:39:22]  *** Error codes and diagnostics ***
[2026-01-09 05:39:22]     "exeErrorCode": 0,
[2026-01-09 05:39:22]     "exeErrorDiag": "",
[2026-01-09 05:39:22]     "pilotErrorCode": 0,
[2026-01-09 05:39:22]     "pilotErrorDiag": "",
[2026-01-09 05:39:22]  *** Listing of results directory ***
[2026-01-09 05:39:22] total 442428
[2026-01-09 05:39:22] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 05:39:22] -rwx------ 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 05:39:22] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 19:57 queuedata.json
[2026-01-09 05:39:22] -rw-r--r-- 1 boincer umatlas       100 Jan  9 01:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:39:22] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 01:16 run_atlas
[2026-01-09 05:39:22] -rw-r--r-- 1 boincer umatlas       105 Jan  9 01:16 job.xml
[2026-01-09 05:39:22] -rw-r--r-- 2 boincer umatlas 222657257 Jan  9 01:16 EVNT.47898824._001374.pool.root.1
[2026-01-09 05:39:22] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 01:16 start_atlas.sh
[2026-01-09 05:39:22] drwxrwx--x 2 boincer umatlas      4096 Jan  9 01:16 shared
[2026-01-09 05:39:22] -rw-r--r-- 2 boincer umatlas    592392 Jan  9 01:16 input.tar.gz
[2026-01-09 05:39:22] -rw-r--r-- 1 boincer umatlas         0 Jan  9 01:16 boinc_lockfile
[2026-01-09 05:39:22] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 01:16 pandaJob.out
[2026-01-09 05:39:22] -rw------- 1 boincer umatlas        57 Jan  9 01:16 setup.sh.local
[2026-01-09 05:39:22] -rw------- 1 boincer umatlas    989771 Jan  9 01:16 agis_schedconf.cvmfs.json
[2026-01-09 05:39:22] drwx------ 5 boincer umatlas      4096 Jan  9 01:16 pilot3
[2026-01-09 05:39:22] -rw------- 1 boincer umatlas 221148647 Jan  9 05:37 HITS.47898826._035460.pool.root.1
[2026-01-09 05:39:22] -rw-r--r-- 1 boincer umatlas       531 Jan  9 05:38 boinc_task_state.xml
[2026-01-09 05:39:22] -rw------- 1 boincer umatlas      1053 Jan  9 05:38 memory_monitor_summary.json
[2026-01-09 05:39:22] -rw------- 1 boincer umatlas   1516240 Jan  9 05:38 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:39:22] -rw------- 1 boincer umatlas    482863 Jan  9 05:38 log.47898826._035460.job.log.tgz.1
[2026-01-09 05:39:22] -rw------- 1 boincer umatlas      7864 Jan  9 05:38 heartbeat.json
[2026-01-09 05:39:22] -rw------- 1 boincer umatlas        95 Jan  9 05:38 pilot_heartbeat.json
[2026-01-09 05:39:22] -rw-r--r-- 1 boincer umatlas        29 Jan  9 05:38 wrapper_checkpoint.txt
[2026-01-09 05:39:22] -rw------- 1 boincer umatlas      5007 Jan  9 05:39 pilotlog.txt
[2026-01-09 05:39:22] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 05:39 init_data.xml
[2026-01-09 05:39:22] -rw------- 1 boincer umatlas   2181211 Jan  9 05:39 log.47898826._035460.job.log.1
[2026-01-09 05:39:22] -rw------- 1 boincer umatlas       357 Jan  9 05:39 output.list
[2026-01-09 05:39:22] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 05:39 boinc_mmap_file
[2026-01-09 05:39:22] -rw-r--r-- 1 boincer umatlas       620 Jan  9 05:39 runtime_log
[2026-01-09 05:39:22] -rw------- 1 boincer umatlas   2682880 Jan  9 05:39 result.tar.gz
[2026-01-09 05:39:22] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 05:39 runtime_log.err
[2026-01-09 05:39:22] -rw------- 1 boincer umatlas       663 Jan  9 05:39 BK5KDmczFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlolKDmeaoJrn.diag
[2026-01-09 05:39:22] -rw-r--r-- 1 boincer umatlas     21360 Jan  9 05:39 stderr.txt
[2026-01-09 05:39:22] HITS file was successfully produced:
[2026-01-09 05:39:22] -rw------- 1 boincer umatlas 221148647 Jan  9 05:37 shared/HITS.pool.root.1
[2026-01-09 05:39:22]  *** Contents of shared directory: ***
[2026-01-09 05:39:22] total 436628
[2026-01-09 05:39:22] -rw-r--r-- 2 boincer umatlas 222657257 Jan  9 01:16 ATLAS.root_0
[2026-01-09 05:39:22] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 01:16 start_atlas.sh
[2026-01-09 05:39:22] -rw-r--r-- 2 boincer umatlas    592392 Jan  9 01:16 input.tar.gz
[2026-01-09 05:39:22] -rw------- 1 boincer umatlas 221148647 Jan  9 05:37 HITS.pool.root.1
[2026-01-09 05:39:22] -rw------- 1 boincer umatlas   2682880 Jan  9 05:39 result.tar.gz
05:39:23 (17171): run_atlas exited; CPU time 120325.885332
05:39:23 (17171): called boinc_finish(0)

</stderr_txt>
]]>

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