Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:41:39 (5103): wrapper (7.7.26015): starting
09:41:39 (5103): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 09:41:39] Arguments: --nthreads 8
[2026-01-09 09:41:39] Threads: 8
[2026-01-09 09:41:39] Checking for CVMFS
[2026-01-09 09:41:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:41:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:41:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:41:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:41:40] 2.11.2.0 22272 35188 96728 154937 0 56 12673103 25165825 0 130560 0 15699232 99.849 10905519 2889 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 09:41:40] CVMFS is ok
[2026-01-09 09:41:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:41:40] Checking for apptainer binary...
[2026-01-09 09:41:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:41:40] Running /usr/bin/apptainer --version
[2026-01-09 09:41:40] apptainer version 1.3.2-1.el7
[2026-01-09 09:41:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:41:41] cg-vwn457.simple-grid.lan
[2026-01-09 09:41:41] apptainer works
[2026-01-09 09:41:41] Set ATHENA_PROC_NUMBER=8
[2026-01-09 09:41:41] Set ATHENA_CORE_NUMBER=8
[2026-01-09 09:41:41] Starting ATLAS job with PandaID=6963166788
[2026-01-09 09:41:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:24:19]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:24:19] 2026-01-09 11:23:34,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:24:19] 2026-01-09 11:23:35,247 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 12:24:19] 2026-01-09 11:23:35,248 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-09 12:24:19] 2026-01-09 11:23:35,250 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6963166788/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:24:19] 2026-01-09 11:23:35,251 | INFO     | extracted standard info from prmon json
[2026-01-09 12:24:19] 2026-01-09 11:23:35,251 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:24:19] 2026-01-09 11:23:35,251 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:24:19] 2026-01-09 11:23:35,252 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:24:19] 2026-01-09 11:23:35,252 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:24:19] 2026-01-09 11:23:35,255 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:24:19] 2026-01-09 11:23:35,256 | INFO     | sum of square deviations: 1246386160.0
[2026-01-09 12:24:19] 2026-01-09 11:23:35,257 | INFO     | sum of deviations: -10601529952.999998
[2026-01-09 12:24:19] 2026-01-09 11:23:35,257 | INFO     | mean x: 1767952967.0
[2026-01-09 12:24:19] 2026-01-09 11:23:35,257 | INFO     | mean y: 2510967.452830189
[2026-01-09 12:24:19] 2026-01-09 11:23:35,258 | INFO     | intersect: 15040391631.29598
[2026-01-09 12:24:19] 2026-01-09 11:23:35,258 | INFO     | chi2: 2.4074588717846206
[2026-01-09 12:24:19] 2026-01-09 11:23:35,258 | INFO     | sum of square deviations: 1132458442.5
[2026-01-09 12:24:19] 2026-01-09 11:23:35,259 | INFO     | sum of deviations: 291868102.9999974
[2026-01-09 12:24:19] 2026-01-09 11:23:35,260 | INFO     | mean x: 1767952814.5
[2026-01-09 12:24:19] 2026-01-09 11:23:35,260 | INFO     | mean y: 2525190.1948051946
[2026-01-09 12:24:19] 2026-01-09 11:23:35,260 | INFO     | intersect: -453128646.4461992
[2026-01-09 12:24:19] 2026-01-09 11:23:35,260 | INFO     | chi2: 1.6444932780190769
[2026-01-09 12:24:19] 2026-01-09 11:23:35,260 | INFO     | current chi2=1.6444932780190769 (change=31.691739481304886 %)
[2026-01-09 12:24:19] 2026-01-09 11:23:35,260 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 12:24:19] 2026-01-09 11:23:35,261 | INFO     | sum of deviations: 461052273.9999966
[2026-01-09 12:24:19] 2026-01-09 11:23:35,262 | INFO     | mean x: 1767952662.0
[2026-01-09 12:24:19] 2026-01-09 11:23:35,262 | INFO     | mean y: 2525431.8926174496
[2026-01-09 12:24:19] 2026-01-09 11:23:35,262 | INFO     | intersect: -792174423.312148
[2026-01-09 12:24:19] 2026-01-09 11:23:35,262 | INFO     | chi2: 1.6451374988565841
[2026-01-09 12:24:19] 2026-01-09 11:23:35,262 | INFO     | current chi2=1.6451374988565841 (change=-0.039174428142587134 %)
[2026-01-09 12:24:19] 2026-01-09 11:23:35,262 | INFO     | right removable region: 148
[2026-01-09 12:24:19] 2026-01-09 11:23:35,263 | INFO     | sum of square deviations: 1132458442.5
[2026-01-09 12:24:19] 2026-01-09 11:23:35,263 | INFO     | sum of deviations: -34401578178.0
[2026-01-09 12:24:19] 2026-01-09 11:23:35,264 | INFO     | mean x: 1767953119.5
[2026-01-09 12:24:19] 2026-01-09 11:23:35,264 | INFO     | mean y: 2542351.8701298703
[2026-01-09 12:24:19] 2026-01-09 11:23:35,264 | INFO     | intersect: 53709040685.929955
[2026-01-09 12:24:19] 2026-01-09 11:23:35,264 | INFO     | chi2: 0.9459304855646198
[2026-01-09 12:24:19] 2026-01-09 11:23:35,264 | INFO     | current chi2=0.9459304855646198 (change=60.70834286513011 %)
[2026-01-09 12:24:19] 2026-01-09 11:23:35,265 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 12:24:19] 2026-01-09 11:23:35,266 | INFO     | sum of deviations: -31661943860.000004
[2026-01-09 12:24:19] 2026-01-09 11:23:35,266 | INFO     | mean x: 1767953272.0
[2026-01-09 12:24:19] 2026-01-09 11:23:35,266 | INFO     | mean y: 2538377.234899329
[2026-01-09 12:24:19] 2026-01-09 11:23:35,266 | INFO     | intersect: 54577154535.9362
[2026-01-09 12:24:19] 2026-01-09 11:23:35,266 | INFO     | chi2: 0.9356031122221256
[2026-01-09 12:24:19] 2026-01-09 11:23:35,266 | INFO     | current chi2=0.9356031122221256 (change=1.0917687398910592 %)
[2026-01-09 12:24:19] 2026-01-09 11:23:35,267 | INFO     | left removable region: 20
[2026-01-09 12:24:19] 2026-01-09 11:23:35,267 | INFO     | sum of square deviations: 650252192.0
[2026-01-09 12:24:19] 2026-01-09 11:23:35,268 | INFO     | sum of deviations: -10313391725.5
[2026-01-09 12:24:19] 2026-01-09 11:23:35,268 | INFO     | mean x: 1767953241.5
[2026-01-09 12:24:19] 2026-01-09 11:23:35,268 | INFO     | mean y: 2538394.1328125
[2026-01-09 12:24:19] 2026-01-09 11:23:35,268 | INFO     | intersect: 28043342494.885468
[2026-01-09 12:24:19] 2026-01-09 11:23:35,268 | INFO     | chi2: 0.10317447202381932
[2026-01-09 12:24:19] 2026-01-09 11:23:35,268 | INFO     | current memory leak: -15.86 B/s (using 128 data points, chi2=0.10)
[2026-01-09 12:24:19] 2026-01-09 11:23:35,269 | INFO     | could have reported an average CPU frequency of 2250 MHz (8 samples)
[2026-01-09 12:24:19] 2026-01-09 11:23:35,269 | INFO     | ..............................
[2026-01-09 12:24:19] 2026-01-09 11:23:35,269 | INFO     | . Timing measurements:
[2026-01-09 12:24:19] 2026-01-09 11:23:35,269 | INFO     | . get job = 0 s
[2026-01-09 12:24:19] 2026-01-09 11:23:35,269 | INFO     | . initial setup = 2 s
[2026-01-09 12:24:19] 2026-01-09 11:23:35,269 | INFO     | . payload setup = 7 s
[2026-01-09 12:24:19] 2026-01-09 11:23:35,270 | INFO     | . stage-in = 0 s
[2026-01-09 12:24:19] 2026-01-09 11:23:35,270 | INFO     | . payload execution = 9666 s
[2026-01-09 12:24:19] 2026-01-09 11:23:35,270 | INFO     | . stage-out = 1 s
[2026-01-09 12:24:19] 2026-01-09 11:23:35,270 | INFO     | . log creation = 0 s
[2026-01-09 12:24:19] 2026-01-09 11:23:35,270 | INFO     | ..............................
[2026-01-09 12:24:19] 2026-01-09 11:23:35,715 | INFO     | 
[2026-01-09 12:24:19] 2026-01-09 11:23:35,715 | INFO     | job summary report
[2026-01-09 12:24:19] 2026-01-09 11:23:35,715 | INFO     | --------------------------------------------------
[2026-01-09 12:24:19] 2026-01-09 11:23:35,715 | INFO     | PanDA job id: 6963166788
[2026-01-09 12:24:19] 2026-01-09 11:23:35,715 | INFO     | task id: 47898826
[2026-01-09 12:24:19] 2026-01-09 11:23:35,715 | INFO     | errors: (none)
[2026-01-09 12:24:19] 2026-01-09 11:23:35,715 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:24:19] 2026-01-09 11:23:35,715 | INFO     | pilot state: finished 
[2026-01-09 12:24:19] 2026-01-09 11:23:35,716 | INFO     | transexitcode: 0
[2026-01-09 12:24:19] 2026-01-09 11:23:35,716 | INFO     | exeerrorcode: 0
[2026-01-09 12:24:19] 2026-01-09 11:23:35,716 | INFO     | exeerrordiag: 
[2026-01-09 12:24:19] 2026-01-09 11:23:35,716 | INFO     | exitcode: 0
[2026-01-09 12:24:19] 2026-01-09 11:23:35,716 | INFO     | exitmsg: OK
[2026-01-09 12:24:19] 2026-01-09 11:23:35,716 | INFO     | cpuconsumptiontime: 73849 s
[2026-01-09 12:24:19] 2026-01-09 11:23:35,716 | INFO     | nevents: 400
[2026-01-09 12:24:19] 2026-01-09 11:23:35,716 | INFO     | neventsw: 0
[2026-01-09 12:24:19] 2026-01-09 11:23:35,716 | INFO     | pid: 15267
[2026-01-09 12:24:19] 2026-01-09 11:23:35,717 | INFO     | pgrp: 15267
[2026-01-09 12:24:19] 2026-01-09 11:23:35,717 | INFO     | corecount: 8
[2026-01-09 12:24:19] 2026-01-09 11:23:35,717 | INFO     | event service: False
[2026-01-09 12:24:19] 2026-01-09 11:23:35,717 | INFO     | sizes: {0: 2283858, 1: 2284000, 6: 2284262, 11: 2284290, 9674: 2312498, 9676: 2321682, 9682: 2321820}
[2026-01-09 12:24:19] 2026-01-09 11:23:35,717 | INFO     | --------------------------------------------------
[2026-01-09 12:24:19] 2026-01-09 11:23:35,717 | INFO     | 
[2026-01-09 12:24:19] 2026-01-09 11:23:35,717 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-01-09 12:24:19] 2026-01-09 11:23:35,754 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,755 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,755 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,755 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,755 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,755 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,755 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,755 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,755 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,756 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,756 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,756 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,756 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,756 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,756 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,756 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,756 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:24:19] 2026-01-09 11:23:35,756 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,757 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:24:19] 2026-01-09 11:23:35,757 | INFO     | job 6963166788 has completed (purged errors)
[2026-01-09 12:24:19] 2026-01-09 11:23:35,757 | INFO     | overall cleanup function is called
[2026-01-09 12:24:19] 2026-01-09 11:23:36,765 | INFO     | --- collectZombieJob: --- 10, [15267]
[2026-01-09 12:24:19] 2026-01-09 11:23:36,766 | INFO     | zombie collector waiting for pid 15267
[2026-01-09 12:24:19] 2026-01-09 11:23:36,766 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:24:19] 2026-01-09 11:23:36,766 | INFO     | collected zombie processes
[2026-01-09 12:24:19] 2026-01-09 11:23:36,766 | INFO     | will attempt to kill all subprocesses of pid=15267
[2026-01-09 12:24:19] 2026-01-09 11:23:36,827 | INFO     | process IDs to be killed: [15267] (in reverse order)
[2026-01-09 12:24:19] 2026-01-09 11:23:36,870 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:24:19] 2026-01-09 11:23:36,870 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:24:19] 2026-01-09 11:23:36,873 | INFO     | did not find any defunct processes belonging to 15267
[2026-01-09 12:24:19] 2026-01-09 11:23:36,874 | INFO     | did not find any defunct processes belonging to 15267
[2026-01-09 12:24:19] 2026-01-09 11:23:36,875 | INFO     | ready for new job
[2026-01-09 12:24:19] 2026-01-09 11:23:36,875 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:24:19] 2026-01-09 11:23:36,877 | INFO     | ***************************************
[2026-01-09 12:24:19] 2026-01-09 11:23:36,877 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:24:19] 2026-01-09 11:23:36,877 | INFO     | ***************************************
[2026-01-09 12:24:19] 2026-01-09 11:23:36,877 | INFO     | 
[2026-01-09 12:24:19] 2026-01-09 11:23:36,878 | INFO     | pilot is running in a VM
[2026-01-09 12:24:19] 2026-01-09 11:23:36,878 | INFO     | architecture information:
[2026-01-09 12:24:19] 2026-01-09 11:23:36,878 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:24:19] 2026-01-09 11:23:36,896 | INFO     | cat /etc/os-release:
[2026-01-09 12:24:19] NAME="CentOS Linux"
[2026-01-09 12:24:19] VERSION="7 (Core)"
[2026-01-09 12:24:19] ID="centos"
[2026-01-09 12:24:19] ID_LIKE="rhel fedora"
[2026-01-09 12:24:19] VERSION_ID="7"
[2026-01-09 12:24:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:24:19] ANSI_COLOR="0;31"
[2026-01-09 12:24:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:24:19] HOME_URL="https://www.centos.org/"
[2026-01-09 12:24:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:24:19] 
[2026-01-09 12:24:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:24:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:24:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:24:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:24:19] 
[2026-01-09 12:24:19] 2026-01-09 11:23:36,897 | INFO     | ***************************************
[2026-01-09 12:24:19] 2026-01-09 11:23:37,400 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-01-09 12:24:19] 2026-01-09 11:23:37,419 | INFO     | sufficient remaining disk space (498201526272 B)
[2026-01-09 12:24:19] 2026-01-09 11:23:37,420 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:24:19] 2026-01-09 11:23:37,420 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:24:19] 2026-01-09 11:23:37,420 | INFO     | update_server=False
[2026-01-09 12:24:19] 2026-01-09 11:23:37,420 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:24:19] 2026-01-09 11:23:37,421 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:24:19] 2026-01-09 11:23:37,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:24:19] 2026-01-09 11:23:37,836 | INFO     | aborting loop
[2026-01-09 12:24:19] 2026-01-09 11:23:38,387 | INFO     | all data control threads have been joined
[2026-01-09 12:24:19] 2026-01-09 11:23:38,426 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:24:19] 2026-01-09 11:23:38,796 | INFO     | all payload control threads have been joined
[2026-01-09 12:24:19] 2026-01-09 11:23:38,824 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:24:19] 2026-01-09 11:23:38,842 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:24:19] 2026-01-09 11:23:38,960 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:24:19] 2026-01-09 11:23:39,118 | INFO     | [job] validate thread has finished
[2026-01-09 12:24:19] 2026-01-09 11:23:39,122 | INFO     | all job control threads have been joined
[2026-01-09 12:24:19] 2026-01-09 11:23:39,393 | INFO     | [data] control thread has finished
[2026-01-09 12:24:19] 2026-01-09 11:23:39,427 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:24:19] 2026-01-09 11:23:39,517 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:24:19] 2026-01-09 11:23:39,571 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:24:19] 2026-01-09 11:23:39,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:24:19] 2026-01-09 11:23:39,783 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:24:19] 2026-01-09 11:23:39,802 | INFO     | [payload] control thread has finished
[2026-01-09 12:24:19] 2026-01-09 11:23:39,879 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:24:19] 2026-01-09 11:23:40,128 | INFO     | [job] control thread has finished
[2026-01-09 12:24:19] 2026-01-09 11:23:40,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:24:19] 2026-01-09 11:23:41,389 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:24:19] 2026-01-09 11:23:43,735 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:24:19] 2026-01-09 11:23:47,547 | INFO     | job.realtimelogging is not enabled
[2026-01-09 12:24:19] 2026-01-09 11:23:48,552 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:24:19] 2026-01-09 11:24:06,838 | INFO     | PID=8834 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 12:24:19] 2026-01-09 11:24:06,839 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:24:19] 2026-01-09 11:24:06,839 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:24:19] 2026-01-09 11:24:06,839 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:24:19] 2026-01-09 11:24:12,059 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:24:19] 2026-01-09 11:24:13,633 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140671519356736)>', '<ExcThread(monitor, started 140670622746368)>']
[2026-01-09 12:24:19] 2026-01-09 11:24:13,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:24:19] 2026-01-09 11:24:13,875 | INFO     | [monitor] control thread has ended
[2026-01-09 12:24:19] 2026-01-09 11:24:18,645 | INFO     | all workflow threads have been joined
[2026-01-09 12:24:19] 2026-01-09 11:24:18,645 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:24:19] 2026-01-09 11:24:18,645 | INFO     | traces error code: 0
[2026-01-09 12:24:19] 2026-01-09 11:24:18,646 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:24:19] 2026-01-09 11:24:18,779 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:24:19] 2026-01-09 11:24:18,784 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:24:19] 2026-01-09 11:24:18,794 [wrapper] pilotpid: 8834
[2026-01-09 12:24:19] 2026-01-09 11:24:18,798 [wrapper] Pilot exit status: 0
[2026-01-09 12:24:19] 2026-01-09 11:24:18,815 [wrapper] pandaids: 6963166788
[2026-01-09 12:24:19] 2026-01-09 11:24:18,847 [wrapper] cleanup supervisor_pilot 31793 8835
[2026-01-09 12:24:19] 2026-01-09 11:24:18,853 [wrapper] Test setup, not cleaning
[2026-01-09 12:24:19] 2026-01-09 11:24:18,856 [wrapper] apfmon messages muted
[2026-01-09 12:24:19] 2026-01-09 11:24:18,860 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:24:19] 2026-01-09 11:24:18,863 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:24:19]  *** Error codes and diagnostics ***
[2026-01-09 12:24:19]     "exeErrorCode": 0,
[2026-01-09 12:24:19]     "exeErrorDiag": "",
[2026-01-09 12:24:19]     "pilotErrorCode": 0,
[2026-01-09 12:24:19]     "pilotErrorDiag": "",
[2026-01-09 12:24:19]  *** Listing of results directory ***
[2026-01-09 12:24:19] total 448316
[2026-01-09 12:24:19] -rwx------. 1 boinc boinc     36322 Jan  9 01:57 runpilot2-wrapper.sh
[2026-01-09 12:24:19] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 12:24:19] -rw-r--r--. 1 boinc boinc      5112 Jan  9 01:57 queuedata.json
[2026-01-09 12:24:19] -rw-r--r--. 1 boinc boinc       100 Jan  9 09:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:24:19] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 09:41 run_atlas
[2026-01-09 12:24:19] -rw-r--r--. 1 boinc boinc       105 Jan  9 09:41 job.xml
[2026-01-09 12:24:19] -rw-r--r--. 1 boinc boinc      6390 Jan  9 09:41 init_data.xml
[2026-01-09 12:24:19] -rw-r--r--. 2 boinc boinc 229496575 Jan  9 09:41 EVNT.47898824._001363.pool.root.1
[2026-01-09 12:24:19] -rw-r--r--. 2 boinc boinc     15847 Jan  9 09:41 start_atlas.sh
[2026-01-09 12:24:19] drwxrwx--x. 2 boinc boinc        68 Jan  9 09:41 shared
[2026-01-09 12:24:19] -rw-r--r--. 2 boinc boinc    592393 Jan  9 09:41 input.tar.gz
[2026-01-09 12:24:19] -rw-r--r--. 1 boinc boinc         0 Jan  9 09:41 boinc_lockfile
[2026-01-09 12:24:19] -rw-r--r--. 1 boinc boinc      2520 Jan  9 09:41 pandaJob.out
[2026-01-09 12:24:19] -rw-------. 1 boinc boinc    989759 Jan  9 09:41 agis_schedconf.cvmfs.json
[2026-01-09 12:24:19] -rw-------. 1 boinc boinc   1516240 Jan  9 09:41 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:24:19] drwx------. 5 boinc boinc      4096 Jan  9 09:41 pilot3
[2026-01-09 12:24:19] -rw-------. 1 boinc boinc 222273825 Jan  9 12:22 HITS.47898826._035194.pool.root.1
[2026-01-09 12:24:19] -rw-r--r--. 1 boinc boinc       530 Jan  9 12:23 boinc_task_state.xml
[2026-01-09 12:24:19] -rw-------. 1 boinc boinc      1014 Jan  9 12:23 memory_monitor_summary.json
[2026-01-09 12:24:19] -rw-------. 1 boinc boinc    402142 Jan  9 12:23 log.47898826._035194.job.log.tgz.1
[2026-01-09 12:24:19] -rw-------. 1 boinc boinc      7773 Jan  9 12:23 heartbeat.json
[2026-01-09 12:24:19] -rw-------. 1 boinc boinc        95 Jan  9 12:24 pilot_heartbeat.json
[2026-01-09 12:24:19] -rw-r--r--. 1 boinc boinc      8192 Jan  9 12:24 boinc_mmap_file
[2026-01-09 12:24:19] -rw-r--r--. 1 boinc boinc        27 Jan  9 12:24 wrapper_checkpoint.txt
[2026-01-09 12:24:19] -rw-------. 1 boinc boinc      4881 Jan  9 12:24 pilotlog.txt
[2026-01-09 12:24:19] -rw-------. 1 boinc boinc   1300895 Jan  9 12:24 log.47898826._035194.job.log.1
[2026-01-09 12:24:19] -rw-------. 1 boinc boinc       357 Jan  9 12:24 output.list
[2026-01-09 12:24:19] -rw-r--r--. 1 boinc boinc       620 Jan  9 12:24 runtime_log
[2026-01-09 12:24:19] -rw-------. 1 boinc boinc   1720320 Jan  9 12:24 result.tar.gz
[2026-01-09 12:24:19] -rw-r--r--. 1 boinc boinc      8832 Jan  9 12:24 runtime_log.err
[2026-01-09 12:24:19] -rw-------. 1 boinc boinc       652 Jan  9 12:24 pwuKDmQzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCnlKDmnq167m.diag
[2026-01-09 12:24:19] -rw-r--r--. 1 boinc boinc     20722 Jan  9 12:24 stderr.txt
[2026-01-09 12:24:19] HITS file was successfully produced:
[2026-01-09 12:24:19] -rw-------. 1 boinc boinc 222273825 Jan  9 12:22 shared/HITS.pool.root.1
[2026-01-09 12:24:19]  *** Contents of shared directory: ***
[2026-01-09 12:24:19] total 443464
[2026-01-09 12:24:19] -rw-r--r--. 2 boinc boinc 229496575 Jan  9 09:41 ATLAS.root_0
[2026-01-09 12:24:19] -rw-r--r--. 2 boinc boinc     15847 Jan  9 09:41 start_atlas.sh
[2026-01-09 12:24:19] -rw-r--r--. 2 boinc boinc    592393 Jan  9 09:41 input.tar.gz
[2026-01-09 12:24:19] -rw-------. 1 boinc boinc 222273825 Jan  9 12:22 HITS.pool.root.1
[2026-01-09 12:24:19] -rw-------. 1 boinc boinc   1720320 Jan  9 12:24 result.tar.gz
12:24:20 (5103): run_atlas exited; CPU time 73907.919364
12:24:20 (5103): called boinc_finish(0)

</stderr_txt>
]]>

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