Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:54:50 (23037): wrapper (7.7.26015): starting
00:54:50 (23037): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:54:50] Arguments: --nthreads 8
[2026-01-09 00:54:50] Threads: 8
[2026-01-09 00:54:50] Checking for CVMFS
[2026-01-09 00:54:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:54:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:54:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:54:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:54:51] 2.11.2.0 16446 180631 136940 154933 1 99 16629225 18432001 1859 130560 0 121531754 99.979 6939041 32364 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:54:51] CVMFS is ok
[2026-01-09 00:54:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:54:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:54:51] Further information can be found at the LHC@home message board.
[2026-01-09 00:54:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:54:51] Checking for apptainer binary...
[2026-01-09 00:54:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:54:51] Running /usr/bin/apptainer --version
[2026-01-09 00:54:51] apptainer version 1.3.2-1.el7
[2026-01-09 00:54:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:54:52] c-206-26.aglt2.org
[2026-01-09 00:54:52] apptainer works
[2026-01-09 00:54:52] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:54:52] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:54:52] Starting ATLAS job with PandaID=6963166027
[2026-01-09 00:54:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:17:34]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:17:34] 2026-01-09 10:16:28,824 | INFO     | executing command: lscpu
[2026-01-09 05:17:34] 2026-01-09 10:16:28,853 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 05:17:34] 2026-01-09 10:16:29,568 | INFO     | time since job start (15687s) is within the limit (349056.0s)
[2026-01-09 05:17:34] 2026-01-09 10:16:29,695 | INFO     | monitor loop #1129: job 0:6963166027 is in state 'finished'
[2026-01-09 05:17:34] 2026-01-09 10:16:29,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:17:34] 2026-01-09 10:16:31,577 | INFO     | time since job start (15689s) is within the limit (349056.0s)
[2026-01-09 05:17:34] 2026-01-09 10:16:32,199 | INFO     | monitor loop #1130: job 0:6963166027 is in state 'finished'
[2026-01-09 05:17:34] 2026-01-09 10:16:32,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:17:34] 2026-01-09 10:16:33,194 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 05:17:34] 2026-01-09 10:16:33,198 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2500.0833333333335
[2026-01-09 05:17:34] 2026-01-09 10:16:33,200 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963166027/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 05:17:34] 2026-01-09 10:16:33,201 | INFO     | extracted standard info from prmon json
[2026-01-09 05:17:34] 2026-01-09 10:16:33,201 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 05:17:34] 2026-01-09 10:16:33,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 05:17:34] 2026-01-09 10:16:33,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 05:17:34] 2026-01-09 10:16:33,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 05:17:34] 2026-01-09 10:16:33,205 | INFO     | fitting pss+swap vs Time
[2026-01-09 05:17:34] 2026-01-09 10:16:33,205 | INFO     | sum of square deviations: 5263458688.0
[2026-01-09 05:17:34] 2026-01-09 10:16:33,207 | INFO     | sum of deviations: 24064153642.0
[2026-01-09 05:17:34] 2026-01-09 10:16:33,207 | INFO     | mean x: 1767945936.0
[2026-01-09 05:17:34] 2026-01-09 10:16:33,207 | INFO     | mean y: 2494507.9649805445
[2026-01-09 05:17:34] 2026-01-09 10:16:33,207 | INFO     | intersect: -8080426847.843996
[2026-01-09 05:17:34] 2026-01-09 10:16:33,208 | INFO     | chi2: 1.4046167333564552
[2026-01-09 05:17:34] 2026-01-09 10:16:33,208 | INFO     | sum of square deviations: 4962187923.0
[2026-01-09 05:17:34] 2026-01-09 10:16:33,210 | INFO     | sum of deviations: 23332843186.0
[2026-01-09 05:17:34] 2026-01-09 10:16:33,210 | INFO     | mean x: 1767945783.5
[2026-01-09 05:17:34] 2026-01-09 10:16:33,210 | INFO     | mean y: 2494137.738095238
[2026-01-09 05:17:34] 2026-01-09 10:16:33,210 | INFO     | intersect: -8310613380.127952
[2026-01-09 05:17:34] 2026-01-09 10:16:33,210 | INFO     | chi2: 1.405116307830183
[2026-01-09 05:17:34] 2026-01-09 10:16:33,210 | INFO     | current chi2=1.405116307830183 (change=-0.03556660417493028 %)
[2026-01-09 05:17:34] 2026-01-09 10:16:33,210 | INFO     | right removable region: 251
[2026-01-09 05:17:34] 2026-01-09 10:16:33,211 | INFO     | sum of square deviations: 4962187923.0
[2026-01-09 05:17:34] 2026-01-09 10:16:33,212 | INFO     | sum of deviations: -11304798343.000002
[2026-01-09 05:17:34] 2026-01-09 10:16:33,212 | INFO     | mean x: 1767946088.5
[2026-01-09 05:17:34] 2026-01-09 10:16:33,212 | INFO     | mean y: 2512239.3095238097
[2026-01-09 05:17:34] 2026-01-09 10:16:33,213 | INFO     | intersect: 4030226288.418932
[2026-01-09 05:17:34] 2026-01-09 10:16:33,213 | INFO     | chi2: 0.11395718316256893
[2026-01-09 05:17:34] 2026-01-09 10:16:33,213 | INFO     | current chi2=0.11395718316256893 (change=91.88695531981466 %)
[2026-01-09 05:17:34] 2026-01-09 10:16:33,213 | INFO     | sum of square deviations: 4672638308.0
[2026-01-09 05:17:34] 2026-01-09 10:16:33,215 | INFO     | sum of deviations: -10660606805.999996
[2026-01-09 05:17:34] 2026-01-09 10:16:33,215 | INFO     | mean x: 1767946241.0
[2026-01-09 05:17:34] 2026-01-09 10:16:33,215 | INFO     | mean y: 2511872.3117408906
[2026-01-09 05:17:34] 2026-01-09 10:16:33,215 | INFO     | intersect: 4036074602.2106524
[2026-01-09 05:17:34] 2026-01-09 10:16:33,215 | INFO     | chi2: 0.09877317308491866
[2026-01-09 05:17:34] 2026-01-09 10:16:33,215 | INFO     | current chi2=0.09877317308491866 (change=13.324311514430013 %)
[2026-01-09 05:17:34] 2026-01-09 10:16:33,216 | INFO     | left removable region: 20
[2026-01-09 05:17:34] 2026-01-09 10:16:33,216 | INFO     | sum of square deviations: 3822136780.0
[2026-01-09 05:17:34] 2026-01-09 10:16:33,218 | INFO     | sum of deviations: 6340128025.0
[2026-01-09 05:17:34] 2026-01-09 10:16:33,218 | INFO     | mean x: 1767946363.0
[2026-01-09 05:17:34] 2026-01-09 10:16:33,219 | INFO     | mean y: 2501780.515151515
[2026-01-09 05:17:34] 2026-01-09 10:16:33,219 | INFO     | intersect: -2930152629.2920046
[2026-01-09 05:17:34] 2026-01-09 10:16:33,219 | INFO     | chi2: 0.012785732735398615
[2026-01-09 05:17:34] 2026-01-09 10:16:33,220 | INFO     | current memory leak: 1.66 B/s (using 231 data points, chi2=0.01)
[2026-01-09 05:17:34] 2026-01-09 10:16:33,220 | INFO     | could have reported an average CPU frequency of 2568 MHz (12 samples)
[2026-01-09 05:17:34] 2026-01-09 10:16:33,220 | INFO     | ..............................
[2026-01-09 05:17:34] 2026-01-09 10:16:33,221 | INFO     | . Timing measurements:
[2026-01-09 05:17:34] 2026-01-09 10:16:33,221 | INFO     | . get job = 0 s
[2026-01-09 05:17:34] 2026-01-09 10:16:33,221 | INFO     | . initial setup = 2 s
[2026-01-09 05:17:34] 2026-01-09 10:16:33,221 | INFO     | . payload setup = 4 s
[2026-01-09 05:17:34] 2026-01-09 10:16:33,221 | INFO     | . stage-in = 0 s
[2026-01-09 05:17:34] 2026-01-09 10:16:33,221 | INFO     | . payload execution = 15654 s
[2026-01-09 05:17:34] 2026-01-09 10:16:33,222 | INFO     | . stage-out = 2 s
[2026-01-09 05:17:34] 2026-01-09 10:16:33,222 | INFO     | . log creation = 0 s
[2026-01-09 05:17:34] 2026-01-09 10:16:33,222 | INFO     | ..............................
[2026-01-09 05:17:34] 2026-01-09 10:16:33,353 | INFO     | 
[2026-01-09 05:17:34] 2026-01-09 10:16:33,354 | INFO     | job summary report
[2026-01-09 05:17:34] 2026-01-09 10:16:33,354 | INFO     | --------------------------------------------------
[2026-01-09 05:17:34] 2026-01-09 10:16:33,354 | INFO     | PanDA job id: 6963166027
[2026-01-09 05:17:34] 2026-01-09 10:16:33,354 | INFO     | task id: 47898826
[2026-01-09 05:17:34] 2026-01-09 10:16:33,354 | INFO     | errors: (none)
[2026-01-09 05:17:34] 2026-01-09 10:16:33,354 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:17:34] 2026-01-09 10:16:33,354 | INFO     | pilot state: finished 
[2026-01-09 05:17:34] 2026-01-09 10:16:33,354 | INFO     | transexitcode: 0
[2026-01-09 05:17:34] 2026-01-09 10:16:33,354 | INFO     | exeerrorcode: 0
[2026-01-09 05:17:34] 2026-01-09 10:16:33,354 | INFO     | exeerrordiag: 
[2026-01-09 05:17:34] 2026-01-09 10:16:33,355 | INFO     | exitcode: 0
[2026-01-09 05:17:34] 2026-01-09 10:16:33,355 | INFO     | exitmsg: OK
[2026-01-09 05:17:34] 2026-01-09 10:16:33,355 | INFO     | cpuconsumptiontime: 119888 s
[2026-01-09 05:17:34] 2026-01-09 10:16:33,355 | INFO     | nevents: 400
[2026-01-09 05:17:34] 2026-01-09 10:16:33,355 | INFO     | neventsw: 0
[2026-01-09 05:17:34] 2026-01-09 10:16:33,355 | INFO     | pid: 826
[2026-01-09 05:17:34] 2026-01-09 10:16:33,356 | INFO     | pgrp: 826
[2026-01-09 05:17:34] 2026-01-09 10:16:33,356 | INFO     | corecount: 8
[2026-01-09 05:17:34] 2026-01-09 10:16:33,356 | INFO     | event service: False
[2026-01-09 05:17:34] 2026-01-09 10:16:33,356 | INFO     | sizes: {0: 2283800, 1: 2283999, 4: 2284261, 12: 2284289, 15662: 2315441, 15663: 2315440, 15665: 2324622, 15668: 2324678, 15674: 2324872}
[2026-01-09 05:17:34] 2026-01-09 10:16:33,356 | INFO     | --------------------------------------------------
[2026-01-09 05:17:34] 2026-01-09 10:16:33,357 | INFO     | 
[2026-01-09 05:17:34] 2026-01-09 10:16:33,357 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 05:17:34] 2026-01-09 10:16:33,384 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,385 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,385 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,385 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,385 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,385 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,387 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,387 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,387 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,388 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:17:34] 2026-01-09 10:16:33,388 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,388 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:17:34] 2026-01-09 10:16:33,388 | INFO     | job 6963166027 has completed (purged errors)
[2026-01-09 05:17:34] 2026-01-09 10:16:33,389 | INFO     | overall cleanup function is called
[2026-01-09 05:17:34] 2026-01-09 10:16:34,397 | INFO     | --- collectZombieJob: --- 10, [826]
[2026-01-09 05:17:34] 2026-01-09 10:16:34,397 | INFO     | zombie collector waiting for pid 826
[2026-01-09 05:17:34] 2026-01-09 10:16:34,397 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:17:34] 2026-01-09 10:16:34,398 | INFO     | collected zombie processes
[2026-01-09 05:17:34] 2026-01-09 10:16:34,398 | INFO     | will attempt to kill all subprocesses of pid=826
[2026-01-09 05:17:34] 2026-01-09 10:16:34,562 | INFO     | process IDs to be killed: [826] (in reverse order)
[2026-01-09 05:17:34] 2026-01-09 10:16:34,610 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:17:34] 2026-01-09 10:16:34,610 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:17:34] 2026-01-09 10:16:34,613 | INFO     | did not find any defunct processes belonging to 826
[2026-01-09 05:17:34] 2026-01-09 10:16:34,615 | INFO     | did not find any defunct processes belonging to 826
[2026-01-09 05:17:34] 2026-01-09 10:16:34,615 | INFO     | ready for new job
[2026-01-09 05:17:34] 2026-01-09 10:16:34,616 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:17:34] 2026-01-09 10:16:34,617 | INFO     | ***************************************
[2026-01-09 05:17:34] 2026-01-09 10:16:34,617 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:17:34] 2026-01-09 10:16:34,617 | INFO     | ***************************************
[2026-01-09 05:17:34] 2026-01-09 10:16:34,617 | INFO     | 
[2026-01-09 05:17:34] 2026-01-09 10:16:34,618 | INFO     | architecture information:
[2026-01-09 05:17:34] 2026-01-09 10:16:34,619 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:17:34] 2026-01-09 10:16:34,628 | INFO     | cat /etc/os-release:
[2026-01-09 05:17:34] NAME="CentOS Linux"
[2026-01-09 05:17:34] VERSION="7 (Core)"
[2026-01-09 05:17:34] ID="centos"
[2026-01-09 05:17:34] ID_LIKE="rhel fedora"
[2026-01-09 05:17:34] VERSION_ID="7"
[2026-01-09 05:17:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:17:34] ANSI_COLOR="0;31"
[2026-01-09 05:17:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:17:34] HOME_URL="https://www.centos.org/"
[2026-01-09 05:17:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:17:34] 
[2026-01-09 05:17:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:17:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:17:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:17:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:17:34] 
[2026-01-09 05:17:34] 2026-01-09 10:16:34,628 | INFO     | ***************************************
[2026-01-09 05:17:34] 2026-01-09 10:16:35,131 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 05:17:34] 2026-01-09 10:16:35,144 | INFO     | sufficient remaining disk space (27877441536 B)
[2026-01-09 05:17:34] 2026-01-09 10:16:35,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:17:34] 2026-01-09 10:16:35,145 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:17:34] 2026-01-09 10:16:35,145 | INFO     | update_server=False
[2026-01-09 05:17:34] 2026-01-09 10:16:35,145 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:17:34] 2026-01-09 10:16:35,146 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:17:34] 2026-01-09 10:16:35,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:17:34] 2026-01-09 10:16:35,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:17:34] 2026-01-09 10:16:35,715 | INFO     | aborting loop
[2026-01-09 05:17:34] 2026-01-09 10:16:35,729 | INFO     | all data control threads have been joined
[2026-01-09 05:17:34] 2026-01-09 10:16:35,856 | INFO     | all payload control threads have been joined
[2026-01-09 05:17:34] 2026-01-09 10:16:36,151 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:17:34] 2026-01-09 10:16:36,152 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:17:34] 2026-01-09 10:16:36,192 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:17:34] 2026-01-09 10:16:36,245 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:17:34] 2026-01-09 10:16:36,721 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:17:34] 2026-01-09 10:16:36,737 | INFO     | [data] control thread has finished
[2026-01-09 05:17:34] 2026-01-09 10:16:36,756 | INFO     | all job control threads have been joined
[2026-01-09 05:17:34] 2026-01-09 10:16:36,827 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:17:34] 2026-01-09 10:16:36,828 | INFO     | [job] validate thread has finished
[2026-01-09 05:17:34] 2026-01-09 10:16:36,851 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:17:34] 2026-01-09 10:16:36,861 | INFO     | [payload] control thread has finished
[2026-01-09 05:17:34] 2026-01-09 10:16:36,961 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:17:34] 2026-01-09 10:16:37,151 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:17:34] 2026-01-09 10:16:37,385 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:17:34] 2026-01-09 10:16:37,566 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:17:34] 2026-01-09 10:16:37,762 | INFO     | [job] control thread has finished
[2026-01-09 05:17:34] 2026-01-09 10:16:37,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:17:34] 2026-01-09 10:16:41,881 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:17:34] 2026-01-09 10:17:03,629 | INFO     | 15693s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 05:17:34] 2026-01-09 10:17:04,764 | INFO     | PID=26727 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 05:17:34] 2026-01-09 10:17:04,764 | INFO     | .. there are 3 such processes running
[2026-01-09 05:17:34] 2026-01-09 10:17:04,764 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:17:34] 2026-01-09 10:17:04,764 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:17:34] 2026-01-09 10:17:04,764 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:17:34] 2026-01-09 10:17:27,891 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:17:34] 2026-01-09 10:17:29,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140333776828224)>', '<ExcThread(monitor, started 140333333595904)>']
[2026-01-09 05:17:34] 2026-01-09 10:17:29,896 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:17:34] 2026-01-09 10:17:29,897 | INFO     | [monitor] control thread has ended
[2026-01-09 05:17:34] 2026-01-09 10:17:34,173 | INFO     | all workflow threads have been joined
[2026-01-09 05:17:34] 2026-01-09 10:17:34,173 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:17:34] 2026-01-09 10:17:34,173 | INFO     | traces error code: 0
[2026-01-09 05:17:34] 2026-01-09 10:17:34,173 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:17:34] 2026-01-09 10:17:34,276 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:17:34] 2026-01-09 10:17:34,279 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:17:34] 2026-01-09 10:17:34,281 [wrapper] pilotpid: 26727
[2026-01-09 05:17:34] 2026-01-09 10:17:34,283 [wrapper] Pilot exit status: 0
[2026-01-09 05:17:34] 2026-01-09 10:17:34,292 [wrapper] pandaids: 6963166027
[2026-01-09 05:17:34] 2026-01-09 10:17:34,328 [wrapper] cleanup supervisor_pilot 24711 26728
[2026-01-09 05:17:34] 2026-01-09 10:17:34,330 [wrapper] Test setup, not cleaning
[2026-01-09 05:17:34] 2026-01-09 10:17:34,332 [wrapper] apfmon messages muted
[2026-01-09 05:17:34] 2026-01-09 10:17:34,334 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:17:34] 2026-01-09 10:17:34,336 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:17:34]  *** Error codes and diagnostics ***
[2026-01-09 05:17:34]     "exeErrorCode": 0,
[2026-01-09 05:17:34]     "exeErrorDiag": "",
[2026-01-09 05:17:34]     "pilotErrorCode": 0,
[2026-01-09 05:17:34]     "pilotErrorDiag": "",
[2026-01-09 05:17:34]  *** Listing of results directory ***
[2026-01-09 05:17:34] total 447048
[2026-01-09 05:17:34] -rwx------ 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 05:17:34] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 05:17:34] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 19:57 queuedata.json
[2026-01-09 05:17:34] -rw-r--r-- 1 boincer umatlas       100 Jan  9 00:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:17:34] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 00:54 run_atlas
[2026-01-09 05:17:34] -rw-r--r-- 1 boincer umatlas       105 Jan  9 00:54 job.xml
[2026-01-09 05:17:34] -rw-r--r-- 2 boincer umatlas 226980120 Jan  9 00:54 EVNT.47898824._001361.pool.root.1
[2026-01-09 05:17:34] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 00:54 start_atlas.sh
[2026-01-09 05:17:34] drwxrwx--x 2 boincer umatlas      4096 Jan  9 00:54 shared
[2026-01-09 05:17:34] -rw-r--r-- 2 boincer umatlas    592399 Jan  9 00:54 input.tar.gz
[2026-01-09 05:17:34] -rw-r--r-- 1 boincer umatlas         0 Jan  9 00:54 boinc_lockfile
[2026-01-09 05:17:34] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 00:54 pandaJob.out
[2026-01-09 05:17:34] -rw------- 1 boincer umatlas        57 Jan  9 00:54 setup.sh.local
[2026-01-09 05:17:34] -rw------- 1 boincer umatlas    989771 Jan  9 00:55 agis_schedconf.cvmfs.json
[2026-01-09 05:17:34] drwx------ 5 boincer umatlas      4096 Jan  9 00:55 pilot3
[2026-01-09 05:17:34] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 05:10 init_data.xml
[2026-01-09 05:17:34] -rw------- 1 boincer umatlas 221551579 Jan  9 05:15 HITS.47898826._035140.pool.root.1
[2026-01-09 05:17:34] -rw-r--r-- 1 boincer umatlas       532 Jan  9 05:16 boinc_task_state.xml
[2026-01-09 05:17:34] -rw------- 1 boincer umatlas      1053 Jan  9 05:16 memory_monitor_summary.json
[2026-01-09 05:17:34] -rw------- 1 boincer umatlas   1516240 Jan  9 05:16 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:17:34] -rw------- 1 boincer umatlas    487405 Jan  9 05:16 log.47898826._035140.job.log.tgz.1
[2026-01-09 05:17:34] -rw------- 1 boincer umatlas        95 Jan  9 05:16 pilot_heartbeat.json
[2026-01-09 05:17:34] -rw------- 1 boincer umatlas      7861 Jan  9 05:16 heartbeat.json
[2026-01-09 05:17:34] -rw-r--r-- 1 boincer umatlas        29 Jan  9 05:17 wrapper_checkpoint.txt
[2026-01-09 05:17:34] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 05:17 boinc_mmap_file
[2026-01-09 05:17:34] -rw------- 1 boincer umatlas      4937 Jan  9 05:17 pilotlog.txt
[2026-01-09 05:17:34] -rw------- 1 boincer umatlas   2176861 Jan  9 05:17 log.47898826._035140.job.log.1
[2026-01-09 05:17:34] -rw------- 1 boincer umatlas       357 Jan  9 05:17 output.list
[2026-01-09 05:17:34] -rw-r--r-- 1 boincer umatlas       620 Jan  9 05:17 runtime_log
[2026-01-09 05:17:34] -rw------- 1 boincer umatlas   2682880 Jan  9 05:17 result.tar.gz
[2026-01-09 05:17:34] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 05:17 runtime_log.err
[2026-01-09 05:17:34] -rw------- 1 boincer umatlas       663 Jan  9 05:17 cSKODmPzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmamlKDm2fSyvn.diag
[2026-01-09 05:17:34] -rw-r--r-- 1 boincer umatlas     21390 Jan  9 05:17 stderr.txt
[2026-01-09 05:17:34] HITS file was successfully produced:
[2026-01-09 05:17:34] -rw------- 1 boincer umatlas 221551579 Jan  9 05:15 shared/HITS.pool.root.1
[2026-01-09 05:17:34]  *** Contents of shared directory: ***
[2026-01-09 05:17:34] total 441248
[2026-01-09 05:17:34] -rw-r--r-- 2 boincer umatlas 226980120 Jan  9 00:54 ATLAS.root_0
[2026-01-09 05:17:34] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 00:54 start_atlas.sh
[2026-01-09 05:17:34] -rw-r--r-- 2 boincer umatlas    592399 Jan  9 00:54 input.tar.gz
[2026-01-09 05:17:34] -rw------- 1 boincer umatlas 221551579 Jan  9 05:15 HITS.pool.root.1
[2026-01-09 05:17:34] -rw------- 1 boincer umatlas   2682880 Jan  9 05:17 result.tar.gz
05:17:35 (23037): run_atlas exited; CPU time 120115.265819
05:17:35 (23037): called boinc_finish(0)

</stderr_txt>
]]>

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