Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:40:02 (16072): wrapper (7.7.26015): starting
09:40:02 (16072): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 09:40:02] Arguments: --nthreads 8
[2026-01-09 09:40:02] Threads: 8
[2026-01-09 09:40:02] Checking for CVMFS
[2026-01-09 09:40:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:40:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:40:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:40:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:40:02] 2.11.2.0 18312 35186 95684 154937 1 56 22877327 25165824 0 130560 0 15098730 99.839 9636275 3416 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 09:40:02] CVMFS is ok
[2026-01-09 09:40:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:40:02] Checking for apptainer binary...
[2026-01-09 09:40:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:40:02] Running /usr/bin/apptainer --version
[2026-01-09 09:40:02] apptainer version 1.3.2-1.el7
[2026-01-09 09:40:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:40:04] cg-vwn442.simple-grid.lan
[2026-01-09 09:40:04] apptainer works
[2026-01-09 09:40:04] Set ATHENA_PROC_NUMBER=8
[2026-01-09 09:40:04] Set ATHENA_CORE_NUMBER=8
[2026-01-09 09:40:04] Starting ATLAS job with PandaID=6963165685
[2026-01-09 09:40:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:29:42]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:29:42] 2026-01-09 11:28:56,152 | INFO     | time since job start (10117s) is within the limit (349056.0s)
[2026-01-09 12:29:42] 2026-01-09 11:28:56,792 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 12:29:42] 2026-01-09 11:28:56,793 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 12:29:42] 2026-01-09 11:28:56,795 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963165685/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:29:42] 2026-01-09 11:28:56,795 | INFO     | extracted standard info from prmon json
[2026-01-09 12:29:42] 2026-01-09 11:28:56,796 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:29:42] 2026-01-09 11:28:56,796 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:29:42] 2026-01-09 11:28:56,796 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:29:42] 2026-01-09 11:28:56,796 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:29:42] 2026-01-09 11:28:56,800 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:29:42] 2026-01-09 11:28:56,801 | INFO     | sum of square deviations: 1418361477.5
[2026-01-09 12:29:42] 2026-01-09 11:28:56,802 | INFO     | sum of deviations: -10908406465.500002
[2026-01-09 12:29:42] 2026-01-09 11:28:56,802 | INFO     | mean x: 1767953083.5
[2026-01-09 12:29:42] 2026-01-09 11:28:56,802 | INFO     | mean y: 2505573.801204819
[2026-01-09 12:29:42] 2026-01-09 11:28:56,802 | INFO     | intersect: 13599568912.509983
[2026-01-09 12:29:42] 2026-01-09 11:28:56,803 | INFO     | chi2: 2.4306263418695226
[2026-01-09 12:29:42] 2026-01-09 11:28:56,803 | INFO     | sum of square deviations: 1294014960.0
[2026-01-09 12:29:42] 2026-01-09 11:28:56,804 | INFO     | sum of deviations: 242454564.9999993
[2026-01-09 12:29:42] 2026-01-09 11:28:56,804 | INFO     | mean x: 1767952931.0
[2026-01-09 12:29:42] 2026-01-09 11:28:56,805 | INFO     | mean y: 2518920.7204968943
[2026-01-09 12:29:42] 2026-01-09 11:28:56,805 | INFO     | intersect: -328735564.02369714
[2026-01-09 12:29:42] 2026-01-09 11:28:56,805 | INFO     | chi2: 1.6710568860703052
[2026-01-09 12:29:42] 2026-01-09 11:28:56,805 | INFO     | current chi2=1.6710568860703052 (change=31.249947501802872 %)
[2026-01-09 12:29:42] 2026-01-09 11:28:56,806 | INFO     | sum of square deviations: 1177156955.0
[2026-01-09 12:29:42] 2026-01-09 11:28:56,807 | INFO     | sum of deviations: 219935866.0000011
[2026-01-09 12:29:42] 2026-01-09 11:28:56,807 | INFO     | mean x: 1767952778.5
[2026-01-09 12:29:42] 2026-01-09 11:28:56,807 | INFO     | mean y: 2518891.5512820515
[2026-01-09 12:29:42] 2026-01-09 11:28:56,807 | INFO     | intersect: -327799188.57806283
[2026-01-09 12:29:42] 2026-01-09 11:28:56,807 | INFO     | chi2: 1.6710543580699782
[2026-01-09 12:29:42] 2026-01-09 11:28:56,807 | INFO     | current chi2=1.6710543580699782 (change=0.00015128152417469434 %)
[2026-01-09 12:29:42] 2026-01-09 11:28:56,808 | INFO     | right removable region: 155
[2026-01-09 12:29:42] 2026-01-09 11:28:56,808 | INFO     | sum of square deviations: 1294014960.0
[2026-01-09 12:29:42] 2026-01-09 11:28:56,809 | INFO     | sum of deviations: -36160412284.0
[2026-01-09 12:29:42] 2026-01-09 11:28:56,809 | INFO     | mean x: 1767953236.0
[2026-01-09 12:29:42] 2026-01-09 11:28:56,809 | INFO     | mean y: 2536110.546583851
[2026-01-09 12:29:42] 2026-01-09 11:28:56,809 | INFO     | intersect: 49406847412.01094
[2026-01-09 12:29:42] 2026-01-09 11:28:56,810 | INFO     | chi2: 0.9448072812705728
[2026-01-09 12:29:42] 2026-01-09 11:28:56,810 | INFO     | current chi2=0.9448072812705728 (change=61.12906105741157 %)
[2026-01-09 12:29:42] 2026-01-09 11:28:56,810 | INFO     | sum of square deviations: 1177156955.0
[2026-01-09 12:29:42] 2026-01-09 11:28:56,811 | INFO     | sum of deviations: -33655141369.000004
[2026-01-09 12:29:42] 2026-01-09 11:28:56,811 | INFO     | mean x: 1767953388.5
[2026-01-09 12:29:42] 2026-01-09 11:28:56,812 | INFO     | mean y: 2532780.935897436
[2026-01-09 12:29:42] 2026-01-09 11:28:56,812 | INFO     | intersect: 50548656618.57664
[2026-01-09 12:29:42] 2026-01-09 11:28:56,812 | INFO     | chi2: 0.9351061896685046
[2026-01-09 12:29:42] 2026-01-09 11:28:56,812 | INFO     | current chi2=0.9351061896685046 (change=1.0267799364355277 %)
[2026-01-09 12:29:42] 2026-01-09 11:28:56,812 | INFO     | left removable region: 20
[2026-01-09 12:29:42] 2026-01-09 11:28:56,813 | INFO     | sum of square deviations: 762879420.0
[2026-01-09 12:29:42] 2026-01-09 11:28:56,813 | INFO     | sum of deviations: -12010829484.0
[2026-01-09 12:29:42] 2026-01-09 11:28:56,814 | INFO     | mean x: 1767953358.0
[2026-01-09 12:29:42] 2026-01-09 11:28:56,814 | INFO     | mean y: 2532765.592592593
[2026-01-09 12:29:42] 2026-01-09 11:28:56,814 | INFO     | intersect: 27837319970.36895
[2026-01-09 12:29:42] 2026-01-09 11:28:56,814 | INFO     | chi2: 0.10930601778164943
[2026-01-09 12:29:42] 2026-01-09 11:28:56,814 | INFO     | current memory leak: -15.74 B/s (using 135 data points, chi2=0.11)
[2026-01-09 12:29:42] 2026-01-09 11:28:56,815 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 12:29:42] 2026-01-09 11:28:56,815 | INFO     | ..............................
[2026-01-09 12:29:42] 2026-01-09 11:28:56,815 | INFO     | . Timing measurements:
[2026-01-09 12:29:42] 2026-01-09 11:28:56,815 | INFO     | . get job = 0 s
[2026-01-09 12:29:42] 2026-01-09 11:28:56,815 | INFO     | . initial setup = 1 s
[2026-01-09 12:29:42] 2026-01-09 11:28:56,816 | INFO     | . payload setup = 7 s
[2026-01-09 12:29:42] 2026-01-09 11:28:56,816 | INFO     | . stage-in = 0 s
[2026-01-09 12:29:42] 2026-01-09 11:28:56,816 | INFO     | . payload execution = 10084 s
[2026-01-09 12:29:42] 2026-01-09 11:28:56,816 | INFO     | . stage-out = 1 s
[2026-01-09 12:29:42] 2026-01-09 11:28:56,816 | INFO     | . log creation = 0 s
[2026-01-09 12:29:42] 2026-01-09 11:28:56,816 | INFO     | ..............................
[2026-01-09 12:29:42] 2026-01-09 11:28:57,216 | INFO     | 
[2026-01-09 12:29:42] 2026-01-09 11:28:57,216 | INFO     | job summary report
[2026-01-09 12:29:42] 2026-01-09 11:28:57,216 | INFO     | --------------------------------------------------
[2026-01-09 12:29:42] 2026-01-09 11:28:57,217 | INFO     | PanDA job id: 6963165685
[2026-01-09 12:29:42] 2026-01-09 11:28:57,217 | INFO     | task id: 47898826
[2026-01-09 12:29:42] 2026-01-09 11:28:57,217 | INFO     | errors: (none)
[2026-01-09 12:29:42] 2026-01-09 11:28:57,217 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:29:42] 2026-01-09 11:28:57,217 | INFO     | pilot state: finished 
[2026-01-09 12:29:42] 2026-01-09 11:28:57,217 | INFO     | transexitcode: 0
[2026-01-09 12:29:42] 2026-01-09 11:28:57,217 | INFO     | exeerrorcode: 0
[2026-01-09 12:29:42] 2026-01-09 11:28:57,217 | INFO     | exeerrordiag: 
[2026-01-09 12:29:42] 2026-01-09 11:28:57,217 | INFO     | exitcode: 0
[2026-01-09 12:29:42] 2026-01-09 11:28:57,217 | INFO     | exitmsg: OK
[2026-01-09 12:29:42] 2026-01-09 11:28:57,218 | INFO     | cpuconsumptiontime: 76176 s
[2026-01-09 12:29:42] 2026-01-09 11:28:57,218 | INFO     | nevents: 400
[2026-01-09 12:29:42] 2026-01-09 11:28:57,218 | INFO     | neventsw: 0
[2026-01-09 12:29:42] 2026-01-09 11:28:57,218 | INFO     | pid: 26286
[2026-01-09 12:29:42] 2026-01-09 11:28:57,218 | INFO     | pgrp: 26286
[2026-01-09 12:29:42] 2026-01-09 11:28:57,218 | INFO     | corecount: 8
[2026-01-09 12:29:42] 2026-01-09 11:28:57,218 | INFO     | event service: False
[2026-01-09 12:29:42] 2026-01-09 11:28:57,218 | INFO     | sizes: {0: 2283971, 5: 2284233, 11: 2284289, 10095: 2312688, 10096: 2321742, 10101: 2321944}
[2026-01-09 12:29:42] 2026-01-09 11:28:57,218 | INFO     | --------------------------------------------------
[2026-01-09 12:29:42] 2026-01-09 11:28:57,219 | INFO     | 
[2026-01-09 12:29:42] 2026-01-09 11:28:57,219 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-09 12:29:42] 2026-01-09 11:28:57,241 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,242 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,242 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,242 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,242 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,242 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,243 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,243 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,243 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,244 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,244 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:29:42] 2026-01-09 11:28:57,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,244 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:29:42] 2026-01-09 11:28:57,244 | INFO     | job 6963165685 has completed (purged errors)
[2026-01-09 12:29:42] 2026-01-09 11:28:57,244 | INFO     | overall cleanup function is called
[2026-01-09 12:29:42] 2026-01-09 11:28:58,252 | INFO     | --- collectZombieJob: --- 10, [26286]
[2026-01-09 12:29:42] 2026-01-09 11:28:58,253 | INFO     | zombie collector waiting for pid 26286
[2026-01-09 12:29:42] 2026-01-09 11:28:58,253 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:29:42] 2026-01-09 11:28:58,253 | INFO     | collected zombie processes
[2026-01-09 12:29:42] 2026-01-09 11:28:58,253 | INFO     | will attempt to kill all subprocesses of pid=26286
[2026-01-09 12:29:42] 2026-01-09 11:28:58,315 | INFO     | process IDs to be killed: [26286] (in reverse order)
[2026-01-09 12:29:42] 2026-01-09 11:28:58,359 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:29:42] 2026-01-09 11:28:58,360 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:29:42] 2026-01-09 11:28:58,362 | INFO     | did not find any defunct processes belonging to 26286
[2026-01-09 12:29:42] 2026-01-09 11:28:58,363 | INFO     | did not find any defunct processes belonging to 26286
[2026-01-09 12:29:42] 2026-01-09 11:28:58,363 | INFO     | ready for new job
[2026-01-09 12:29:42] 2026-01-09 11:28:58,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:29:42] 2026-01-09 11:28:58,365 | INFO     | ***************************************
[2026-01-09 12:29:42] 2026-01-09 11:28:58,365 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:29:42] 2026-01-09 11:28:58,366 | INFO     | ***************************************
[2026-01-09 12:29:42] 2026-01-09 11:28:58,366 | INFO     | 
[2026-01-09 12:29:42] 2026-01-09 11:28:58,366 | INFO     | pilot is running in a VM
[2026-01-09 12:29:42] 2026-01-09 11:28:58,367 | INFO     | architecture information:
[2026-01-09 12:29:42] 2026-01-09 11:28:58,367 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:29:42] 2026-01-09 11:28:58,384 | INFO     | cat /etc/os-release:
[2026-01-09 12:29:42] NAME="CentOS Linux"
[2026-01-09 12:29:42] VERSION="7 (Core)"
[2026-01-09 12:29:42] ID="centos"
[2026-01-09 12:29:42] ID_LIKE="rhel fedora"
[2026-01-09 12:29:42] VERSION_ID="7"
[2026-01-09 12:29:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:29:42] ANSI_COLOR="0;31"
[2026-01-09 12:29:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:29:42] HOME_URL="https://www.centos.org/"
[2026-01-09 12:29:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:29:42] 
[2026-01-09 12:29:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:29:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:29:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:29:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:29:42] 
[2026-01-09 12:29:42] 2026-01-09 11:28:58,384 | INFO     | ***************************************
[2026-01-09 12:29:42] 2026-01-09 11:28:58,888 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-09 12:29:42] 2026-01-09 11:28:58,905 | INFO     | sufficient remaining disk space (498101911552 B)
[2026-01-09 12:29:42] 2026-01-09 11:28:58,905 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:29:42] 2026-01-09 11:28:58,905 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:29:42] 2026-01-09 11:28:58,905 | INFO     | update_server=False
[2026-01-09 12:29:42] 2026-01-09 11:28:58,905 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:29:42] 2026-01-09 11:28:58,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:29:42] 2026-01-09 11:28:58,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:29:42] 2026-01-09 11:28:58,907 | INFO     | aborting loop
[2026-01-09 12:29:42] 2026-01-09 11:28:58,907 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:29:42] 2026-01-09 11:28:59,018 | INFO     | all payload control threads have been joined
[2026-01-09 12:29:42] 2026-01-09 11:28:59,780 | INFO     | all data control threads have been joined
[2026-01-09 12:29:42] 2026-01-09 11:28:59,908 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:29:42] 2026-01-09 11:28:59,911 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:29:42] 2026-01-09 11:28:59,912 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:29:42] 2026-01-09 11:29:00,024 | INFO     | [payload] control thread has finished
[2026-01-09 12:29:42] 2026-01-09 11:29:00,151 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:29:42] 2026-01-09 11:29:00,152 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:29:42] 2026-01-09 11:29:00,153 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:29:42] 2026-01-09 11:29:00,248 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:29:42] 2026-01-09 11:29:00,252 | INFO     | all job control threads have been joined
[2026-01-09 12:29:42] 2026-01-09 11:29:00,605 | INFO     | [job] validate thread has finished
[2026-01-09 12:29:42] 2026-01-09 11:29:00,739 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:29:42] 2026-01-09 11:29:00,785 | INFO     | [data] control thread has finished
[2026-01-09 12:29:42] 2026-01-09 11:29:00,894 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:29:42] 2026-01-09 11:29:01,252 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:29:42] 2026-01-09 11:29:01,258 | INFO     | [job] control thread has finished
[2026-01-09 12:29:42] 2026-01-09 11:29:02,254 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:29:42] 2026-01-09 11:29:02,914 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:29:42] 2026-01-09 11:29:09,274 | INFO     | job.realtimelogging is not enabled
[2026-01-09 12:29:42] 2026-01-09 11:29:10,280 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:29:42] 2026-01-09 11:29:29,235 | INFO     | PID=19829 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 12:29:42] 2026-01-09 11:29:29,236 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:29:42] 2026-01-09 11:29:29,236 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:29:42] 2026-01-09 11:29:29,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:29:42] 2026-01-09 11:29:35,931 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:29:42] 2026-01-09 11:29:37,589 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127842518848)>', '<ExcThread(monitor, started 140127615530752)>']
[2026-01-09 12:29:42] 2026-01-09 11:29:38,282 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:29:42] 2026-01-09 11:29:38,283 | INFO     | [monitor] control thread has ended
[2026-01-09 12:29:42] 2026-01-09 11:29:42,605 | INFO     | all workflow threads have been joined
[2026-01-09 12:29:42] 2026-01-09 11:29:42,606 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:29:42] 2026-01-09 11:29:42,606 | INFO     | traces error code: 0
[2026-01-09 12:29:42] 2026-01-09 11:29:42,606 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:29:42] 2026-01-09 11:29:42,768 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:29:42] 2026-01-09 11:29:42,773 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:29:42] 2026-01-09 11:29:42,777 [wrapper] pilotpid: 19829
[2026-01-09 12:29:42] 2026-01-09 11:29:42,780 [wrapper] Pilot exit status: 0
[2026-01-09 12:29:42] 2026-01-09 11:29:42,795 [wrapper] pandaids: 6963165685
[2026-01-09 12:29:42] 2026-01-09 11:29:42,825 [wrapper] cleanup supervisor_pilot 12761 19830
[2026-01-09 12:29:42] 2026-01-09 11:29:42,829 [wrapper] Test setup, not cleaning
[2026-01-09 12:29:42] 2026-01-09 11:29:42,835 [wrapper] apfmon messages muted
[2026-01-09 12:29:42] 2026-01-09 11:29:42,838 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:29:42] 2026-01-09 11:29:42,841 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:29:42]  *** Error codes and diagnostics ***
[2026-01-09 12:29:42]     "exeErrorCode": 0,
[2026-01-09 12:29:42]     "exeErrorDiag": "",
[2026-01-09 12:29:42]     "pilotErrorCode": 0,
[2026-01-09 12:29:42]     "pilotErrorDiag": "",
[2026-01-09 12:29:42]  *** Listing of results directory ***
[2026-01-09 12:29:42] total 444608
[2026-01-09 12:29:42] -rwx------. 1 boinc boinc     36322 Jan  9 01:56 runpilot2-wrapper.sh
[2026-01-09 12:29:42] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 12:29:42] -rw-r--r--. 1 boinc boinc      5112 Jan  9 01:57 queuedata.json
[2026-01-09 12:29:42] -rw-r--r--. 1 boinc boinc       100 Jan  9 09:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:29:42] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 09:40 run_atlas
[2026-01-09 12:29:42] -rw-r--r--. 1 boinc boinc       105 Jan  9 09:40 job.xml
[2026-01-09 12:29:42] -rw-r--r--. 1 boinc boinc      6391 Jan  9 09:40 init_data.xml
[2026-01-09 12:29:42] -rw-r--r--. 2 boinc boinc 225803609 Jan  9 09:40 EVNT.47898824._001352.pool.root.1
[2026-01-09 12:29:42] -rw-r--r--. 2 boinc boinc     15847 Jan  9 09:40 start_atlas.sh
[2026-01-09 12:29:42] drwxrwx--x. 2 boinc boinc        68 Jan  9 09:40 shared
[2026-01-09 12:29:42] -rw-r--r--. 2 boinc boinc    592402 Jan  9 09:40 input.tar.gz
[2026-01-09 12:29:42] -rw-r--r--. 1 boinc boinc         0 Jan  9 09:40 boinc_lockfile
[2026-01-09 12:29:42] -rw-r--r--. 1 boinc boinc      2520 Jan  9 09:40 pandaJob.out
[2026-01-09 12:29:42] -rw-------. 1 boinc boinc    989759 Jan  9 09:40 agis_schedconf.cvmfs.json
[2026-01-09 12:29:42] -rw-------. 1 boinc boinc   1516240 Jan  9 09:40 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:29:42] drwx------. 5 boinc boinc      4096 Jan  9 09:40 pilot3
[2026-01-09 12:29:42] -rw-------. 1 boinc boinc 222071978 Jan  9 12:28 HITS.47898826._034904.pool.root.1
[2026-01-09 12:29:42] -rw-r--r--. 1 boinc boinc       531 Jan  9 12:28 boinc_task_state.xml
[2026-01-09 12:29:42] -rw-------. 1 boinc boinc      1014 Jan  9 12:28 memory_monitor_summary.json
[2026-01-09 12:29:42] -rw-------. 1 boinc boinc    389360 Jan  9 12:28 log.47898826._034904.job.log.tgz.1
[2026-01-09 12:29:42] -rw-------. 1 boinc boinc      7770 Jan  9 12:28 heartbeat.json
[2026-01-09 12:29:42] -rw-------. 1 boinc boinc        95 Jan  9 12:29 pilot_heartbeat.json
[2026-01-09 12:29:42] -rw-r--r--. 1 boinc boinc        28 Jan  9 12:29 wrapper_checkpoint.txt
[2026-01-09 12:29:42] -rw-r--r--. 1 boinc boinc      8192 Jan  9 12:29 boinc_mmap_file
[2026-01-09 12:29:42] -rw-------. 1 boinc boinc      4881 Jan  9 12:29 pilotlog.txt
[2026-01-09 12:29:42] -rw-------. 1 boinc boinc   1361241 Jan  9 12:29 log.47898826._034904.job.log.1
[2026-01-09 12:29:42] -rw-------. 1 boinc boinc       357 Jan  9 12:29 output.list
[2026-01-09 12:29:42] -rw-r--r--. 1 boinc boinc       620 Jan  9 12:29 runtime_log
[2026-01-09 12:29:42] -rw-------. 1 boinc boinc   1771520 Jan  9 12:29 result.tar.gz
[2026-01-09 12:29:42] -rw-r--r--. 1 boinc boinc      8817 Jan  9 12:29 runtime_log.err
[2026-01-09 12:29:42] -rw-------. 1 boinc boinc       655 Jan  9 12:29 8YPMDmEzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbllKDmOZ7RCo.diag
[2026-01-09 12:29:42] -rw-r--r--. 1 boinc boinc     20702 Jan  9 12:29 stderr.txt
[2026-01-09 12:29:42] HITS file was successfully produced:
[2026-01-09 12:29:42] -rw-------. 1 boinc boinc 222071978 Jan  9 12:28 shared/HITS.pool.root.1
[2026-01-09 12:29:42]  *** Contents of shared directory: ***
[2026-01-09 12:29:42] total 439708
[2026-01-09 12:29:42] -rw-r--r--. 2 boinc boinc 225803609 Jan  9 09:40 ATLAS.root_0
[2026-01-09 12:29:42] -rw-r--r--. 2 boinc boinc     15847 Jan  9 09:40 start_atlas.sh
[2026-01-09 12:29:42] -rw-r--r--. 2 boinc boinc    592402 Jan  9 09:40 input.tar.gz
[2026-01-09 12:29:42] -rw-------. 1 boinc boinc 222071978 Jan  9 12:28 HITS.pool.root.1
[2026-01-09 12:29:42] -rw-------. 1 boinc boinc   1771520 Jan  9 12:29 result.tar.gz
12:29:44 (16072): run_atlas exited; CPU time 76244.768769
12:29:44 (16072): called boinc_finish(0)

</stderr_txt>
]]>

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