Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:12:50 (346923): wrapper (7.7.26015): starting
09:12:50 (346923): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 09:12:50] Arguments: --nthreads 4
[2026-01-09 09:12:50] Threads: 4
[2026-01-09 09:12:50] Checking for CVMFS
[2026-01-09 09:12:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:12:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:12:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:12:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:12:50] 2.9.2.0 3067 1119 83784 154936 3 188 20973095 36864001 0 130560 0 902904 99.992 38497 2705 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 09:12:50] CVMFS is ok
[2026-01-09 09:12:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:12:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:12:50] Further information can be found at the LHC@home message board.
[2026-01-09 09:12:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:12:50] Checking for apptainer binary...
[2026-01-09 09:12:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:12:50] Running /usr/bin/apptainer --version
[2026-01-09 09:12:50] apptainer version 1.4.1-1.1
[2026-01-09 09:12:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:12:50] thA383a
[2026-01-09 09:12:50] apptainer works
[2026-01-09 09:12:50] Set ATHENA_PROC_NUMBER=4
[2026-01-09 09:12:50] Set ATHENA_CORE_NUMBER=4
[2026-01-09 09:12:50] Starting ATLAS job with PandaID=6963165657
[2026-01-09 09:12:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:55:12]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:55:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:55:12] ANSI_COLOR="0;31"
[2026-01-09 10:55:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:55:12] HOME_URL="https://www.centos.org/"
[2026-01-09 10:55:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:55:12] 
[2026-01-09 10:55:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:55:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:55:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:55:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:55:12] 
[2026-01-09 10:55:12] 2026-01-09 09:54:13,822 | INFO     | ***************************************
[2026-01-09 10:55:12] 2026-01-09 09:54:14,325 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 10:55:12] 2026-01-09 09:54:14,342 | INFO     | sufficient remaining disk space (239577595904 B)
[2026-01-09 10:55:12] 2026-01-09 09:54:14,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:55:12] 2026-01-09 09:54:14,342 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:55:12] 2026-01-09 09:54:14,342 | INFO     | update_server=False
[2026-01-09 10:55:12] 2026-01-09 09:54:14,342 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:55:12] 2026-01-09 09:54:14,343 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:55:12] 2026-01-09 09:54:14,343 | INFO     | aborting loop
[2026-01-09 10:55:12] 2026-01-09 09:54:14,416 | INFO     | all data control threads have been joined
[2026-01-09 10:55:12] 2026-01-09 09:54:14,832 | INFO     | all job control threads have been joined
[2026-01-09 10:55:12] 2026-01-09 09:54:15,000 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:55:12] 2026-01-09 09:54:15,348 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:55:12] 2026-01-09 09:54:15,348 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:55:12] 2026-01-09 09:54:15,398 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:55:12] 2026-01-09 09:54:15,421 | INFO     | [data] control thread has finished
[2026-01-09 10:55:12] 2026-01-09 09:54:15,450 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:55:12] 2026-01-09 09:54:15,474 | INFO     | all payload control threads have been joined
[2026-01-09 10:55:12] 2026-01-09 09:54:15,499 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:55:12] 2026-01-09 09:54:15,838 | INFO     | [job] control thread has finished
[2026-01-09 10:55:12] 2026-01-09 09:54:15,918 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:55:12] 2026-01-09 09:54:16,395 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:55:12] 2026-01-09 09:54:16,479 | INFO     | [payload] control thread has finished
[2026-01-09 10:55:12] 2026-01-09 09:54:16,628 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:55:12] 2026-01-09 09:54:16,771 | INFO     | [job] validate thread has finished
[2026-01-09 10:55:12] 2026-01-09 09:54:16,913 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:55:12] 2026-01-09 09:54:17,006 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:55:12] 2026-01-09 09:54:17,013 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:55:12] 2026-01-09 09:54:17,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:55:12] 2026-01-09 09:54:18,273 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:55:12] 2026-01-09 09:54:21,020 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:55:12] 2026-01-09 09:54:44,676 | INFO     | PID=350717 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 10:55:12] 2026-01-09 09:54:44,677 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:55:12] 2026-01-09 09:54:44,677 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:55:12] 2026-01-09 09:54:44,677 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:55:12] 2026-01-09 09:55:06,067 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:55:12] 2026-01-09 09:55:06,814 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140552822912832)>', '<ExcThread(monitor, started 140551504512768)>']
[2026-01-09 10:55:12] 2026-01-09 09:55:07,798 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:55:12] 2026-01-09 09:55:07,798 | INFO     | [monitor] control thread has ended
[2026-01-09 10:55:12] 2026-01-09 09:55:11,839 | INFO     | all workflow threads have been joined
[2026-01-09 10:55:12] 2026-01-09 09:55:11,840 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:55:12] 2026-01-09 09:55:11,840 | INFO     | traces error code: 0
[2026-01-09 10:55:12] 2026-01-09 09:55:11,840 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:55:12] 2026-01-09 09:55:11,921 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:55:12] 2026-01-09 09:55:11,924 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:55:12] 2026-01-09 09:55:11,929 [wrapper] pilotpid: 350717
[2026-01-09 10:55:12] 2026-01-09 09:55:11,933 [wrapper] Pilot exit status: 0
[2026-01-09 10:55:12] 2026-01-09 09:55:11,944 [wrapper] pandaids: 6963165657
[2026-01-09 10:55:12] 2026-01-09 09:55:11,968 [wrapper] cleanup supervisor_pilot  372865 350718
[2026-01-09 10:55:12] 2026-01-09 09:55:11,972 [wrapper] Test setup, not cleaning
[2026-01-09 10:55:12] 2026-01-09 09:55:11,977 [wrapper] apfmon messages muted
[2026-01-09 10:55:12] 2026-01-09 09:55:11,981 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:55:12] 2026-01-09 09:55:11,985 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:55:12]  *** Error codes and diagnostics ***
[2026-01-09 10:55:12]     "exeErrorCode": 0,
[2026-01-09 10:55:12]     "exeErrorDiag": "",
[2026-01-09 10:55:12]     "pilotErrorCode": 0,
[2026-01-09 10:55:12]     "pilotErrorDiag": "",
[2026-01-09 10:55:12]  *** Listing of results directory ***
[2026-01-09 10:55:12] total 438008
[2026-01-09 10:55:12] -rwx------ 1 boinc boinc     36322 Jan  9 01:56 runpilot2-wrapper.sh
[2026-01-09 10:55:12] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 10:55:12] -rw-r--r-- 1 boinc boinc      5112 Jan  9 01:57 queuedata.json
[2026-01-09 10:55:12] -rw-r--r-- 1 boinc boinc       100 Jan  9 09:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:55:12] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 09:12 run_atlas
[2026-01-09 10:55:12] -rw-r--r-- 1 boinc boinc       105 Jan  9 09:12 job.xml
[2026-01-09 10:55:12] -rw-r--r-- 2 boinc boinc 223990566 Jan  9 09:12 EVNT.47898824._001351.pool.root.1
[2026-01-09 10:55:12] -rw-r--r-- 2 boinc boinc    592396 Jan  9 09:12 input.tar.gz
[2026-01-09 10:55:12] -rw-r--r-- 2 boinc boinc     15847 Jan  9 09:12 start_atlas.sh
[2026-01-09 10:55:12] drwxrwx--x 2 boinc boinc      4096 Jan  9 09:12 shared
[2026-01-09 10:55:12] -rw-r--r-- 1 boinc boinc         0 Jan  9 09:12 boinc_setup_complete
[2026-01-09 10:55:12] -rw-r--r-- 1 boinc boinc      6377 Jan  9 09:12 init_data.xml
[2026-01-09 10:55:12] -rw-r--r-- 1 boinc boinc         0 Jan  9 09:12 boinc_lockfile
[2026-01-09 10:55:12] -rw-r--r-- 1 boinc boinc      2519 Jan  9 09:12 pandaJob.out
[2026-01-09 10:55:12] -rw------- 1 boinc boinc    989771 Jan  9 09:12 agis_schedconf.cvmfs.json
[2026-01-09 10:55:12] -rw------- 1 boinc boinc   1516240 Jan  9 09:12 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:55:12] drwx------ 5 boinc boinc      4096 Jan  9 09:12 pilot3
[2026-01-09 10:55:12] -rw------- 1 boinc boinc 218327704 Jan  9 10:53 HITS.47898826._034876.pool.root.1
[2026-01-09 10:55:12] -rw-r--r-- 1 boinc boinc       529 Jan  9 10:53 boinc_task_state.xml
[2026-01-09 10:55:12] -rw------- 1 boinc boinc      1026 Jan  9 10:53 memory_monitor_summary.json
[2026-01-09 10:55:12] -rw------- 1 boinc boinc    273428 Jan  9 10:54 log.47898826._034876.job.log.tgz.1
[2026-01-09 10:55:12] -rw------- 1 boinc boinc      7769 Jan  9 10:54 heartbeat.json
[2026-01-09 10:55:12] -rw-r--r-- 1 boinc boinc        27 Jan  9 10:54 wrapper_checkpoint.txt
[2026-01-09 10:55:12] -rw-r--r-- 1 boinc boinc      8192 Jan  9 10:54 boinc_mmap_file
[2026-01-09 10:55:12] -rw------- 1 boinc boinc        95 Jan  9 10:54 pilot_heartbeat.json
[2026-01-09 10:55:12] -rw------- 1 boinc boinc      4751 Jan  9 10:55 pilotlog.txt
[2026-01-09 10:55:12] -rw------- 1 boinc boinc    878717 Jan  9 10:55 log.47898826._034876.job.log.1
[2026-01-09 10:55:12] -rw------- 1 boinc boinc       357 Jan  9 10:55 output.list
[2026-01-09 10:55:12] -rw-r--r-- 1 boinc boinc       620 Jan  9 10:55 runtime_log
[2026-01-09 10:55:12] -rw------- 1 boinc boinc   1167360 Jan  9 10:55 result.tar.gz
[2026-01-09 10:55:12] -rw-r--r-- 1 boinc boinc      8902 Jan  9 10:55 runtime_log.err
[2026-01-09 10:55:12] -rw------- 1 boinc boinc       660 Jan  9 10:55 SDyLDmEzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIllKDmhtKn9m.diag
[2026-01-09 10:55:12] -rw-r--r-- 1 boinc boinc      8502 Jan  9 10:55 stderr.txt
[2026-01-09 10:55:12] HITS file was successfully produced:
[2026-01-09 10:55:12] -rw------- 1 boinc boinc 218327704 Jan  9 10:53 shared/HITS.pool.root.1
[2026-01-09 10:55:12]  *** Contents of shared directory: ***
[2026-01-09 10:55:12] total 433700
[2026-01-09 10:55:12] -rw-r--r-- 2 boinc boinc 223990566 Jan  9 09:12 ATLAS.root_0
[2026-01-09 10:55:12] -rw-r--r-- 2 boinc boinc    592396 Jan  9 09:12 input.tar.gz
[2026-01-09 10:55:12] -rw-r--r-- 2 boinc boinc     15847 Jan  9 09:12 start_atlas.sh
[2026-01-09 10:55:12] -rw------- 1 boinc boinc 218327704 Jan  9 10:53 HITS.pool.root.1
[2026-01-09 10:55:12] -rw------- 1 boinc boinc   1167360 Jan  9 10:55 result.tar.gz
10:55:13 (346923): run_atlas exited; CPU time 23100.173200
10:55:13 (346923): called boinc_finish(0)

</stderr_txt>
]]>

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