Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:14:15 (2344411): wrapper (7.7.26015): starting
17:14:15 (2344411): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 17:14:15] Arguments: --nthreads 4
[2026-01-09 17:14:15] Threads: 4
[2026-01-09 17:14:15] Checking for CVMFS
[2026-01-09 17:14:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:14:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:14:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:14:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:14:16] 2.9.2.0 1623267 2594 88548 154948 0 57 19440713 36864001 0 130560 0 1855292 99.990 100192 5285 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 17:14:16] CVMFS is ok
[2026-01-09 17:14:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:14:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:14:16] Further information can be found at the LHC@home message board.
[2026-01-09 17:14:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:14:16] Checking for apptainer binary...
[2026-01-09 17:14:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:14:16] Running /usr/bin/apptainer --version
[2026-01-09 17:14:16] apptainer version 1.4.1-1.1
[2026-01-09 17:14:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:14:16] thA350a
[2026-01-09 17:14:16] apptainer works
[2026-01-09 17:14:16] Set ATHENA_PROC_NUMBER=4
[2026-01-09 17:14:16] Set ATHENA_CORE_NUMBER=4
[2026-01-09 17:14:16] Starting ATLAS job with PandaID=6963155444
[2026-01-09 17:14:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:55:36]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:55:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-09 18:55:36]  is_altstaged=None
[2026-01-09 18:55:36]  is_tar=False
[2026-01-09 18:55:36]  lfn=log.47898826._030694.job.log.tgz.1
[2026-01-09 18:55:36]  mtime=0
[2026-01-09 18:55:36]  protocol_id=None
[2026-01-09 18:55:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 18:55:36]  replicas=None
[2026-01-09 18:55:36]  scope=mc23_13p6TeV
[2026-01-09 18:55:36]  status=None
[2026-01-09 18:55:36]  status_code=0
[2026-01-09 18:55:36]  storage_token=
[2026-01-09 18:55:36]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6963155444/log.47898826._030694.job.log.tgz.1
[2026-01-09 18:55:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/47/log.47898826._030694.job.log.tgz.1
[2026-01-09 18:55:36]  workdir=None
[2026-01-09 18:55:36] ]
[2026-01-09 18:55:36] 2026-01-09 17:54:29,395 | INFO     | transferring file log.47898826._030694.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6963155444/log.47898826._030694.job.log.tgz.1 to /local/data/boinc/
[2026-01-09 18:55:36] 2026-01-09 17:54:29,396 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6963155444/log.47898826._030694.job.log.tgz.1 /local/data/boinc/slots/0/log.47898826._0306
[2026-01-09 18:55:36] 2026-01-09 17:54:29,413 | INFO     | adding to output.list: log.47898826._030694.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/47/log.47898826._030694.job.log.tg
[2026-01-09 18:55:36] 2026-01-09 17:54:29,413 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 18:55:36] 2026-01-09 17:54:29,413 | INFO     | summary of transferred files:
[2026-01-09 18:55:36] 2026-01-09 17:54:29,413 | INFO     |  -- lfn=log.47898826._030694.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 18:55:36] 2026-01-09 17:54:29,413 | INFO     | stage-out finished correctly
[2026-01-09 18:55:36] 2026-01-09 17:54:29,451 | INFO     | monitor loop #460: job 0:6963155444 is in state 'finished'
[2026-01-09 18:55:36] 2026-01-09 17:54:29,452 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 18:55:36] 2026-01-09 17:54:29,452 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:55:36] 2026-01-09 17:54:30,066 | INFO     | job 6963155444 has state=finished
[2026-01-09 18:55:36] 2026-01-09 17:54:30,066 | INFO     | preparing for final server update for job 6963155444 in state='finished'
[2026-01-09 18:55:36] 2026-01-09 17:54:30,066 | INFO     | this job has now completed (state=finished)
[2026-01-09 18:55:36] 2026-01-09 17:54:30,066 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 18:55:36] 2026-01-09 17:54:30,066 | INFO     | log transfer has been attempted: DONE
[2026-01-09 18:55:36] 2026-01-09 17:54:30,067 | INFO     | job 6963155444 has finished - writing final server update
[2026-01-09 18:55:36] 2026-01-09 17:54:30,067 | INFO     | total number of processed events: 400 (read)
[2026-01-09 18:55:36] 2026-01-09 17:54:30,067 | INFO     | executing command: lscpu
[2026-01-09 18:55:36] 2026-01-09 17:54:30,088 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 18:55:36] 2026-01-09 17:54:30,256 | INFO     | time since job start (6007s) is within the limit (349056.0s)
[2026-01-09 18:55:36] 2026-01-09 17:54:31,959 | INFO     | monitor loop #461: job 0:6963155444 is in state 'finished'
[2026-01-09 18:55:36] 2026-01-09 17:54:31,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:55:36] 2026-01-09 17:54:32,261 | INFO     | time since job start (6009s) is within the limit (349056.0s)
[2026-01-09 18:55:36] 2026-01-09 17:54:33,228 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 18:55:36] 2026-01-09 17:54:33,229 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3381.0181250000005
[2026-01-09 18:55:36] 2026-01-09 17:54:33,231 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963155444/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:55:36] 2026-01-09 17:54:33,231 | INFO     | extracted standard info from prmon json
[2026-01-09 18:55:36] 2026-01-09 17:54:33,231 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:55:36] 2026-01-09 17:54:33,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:55:36] 2026-01-09 17:54:33,231 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:55:36] 2026-01-09 17:54:33,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:55:36] 2026-01-09 17:54:33,232 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:55:36] 2026-01-09 17:54:33,232 | INFO     | sum of square deviations: 241429643.0
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | sum of deviations: -20743213510.500004
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | mean x: 1767978366.5
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | mean y: 2610803.8804347827
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | intersect: 151904226042.7951
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | chi2: 0.11458321659658734
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | current memory leak: -85.92 B/s (using 92 data points, chi2=0.11)
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | could have reported an average CPU frequency of 3659 MHz (7 samples)
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | ..............................
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | . Timing measurements:
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | . get job = 0 s
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | . initial setup = 1 s
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | . payload setup = 4 s
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | . stage-in = 0 s
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | . payload execution = 5983 s
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | . stage-out = 0 s
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | . log creation = 0 s
[2026-01-09 18:55:36] 2026-01-09 17:54:33,233 | INFO     | ..............................
[2026-01-09 18:55:36] 2026-01-09 17:54:33,273 | INFO     | 
[2026-01-09 18:55:36] 2026-01-09 17:54:33,273 | INFO     | job summary report
[2026-01-09 18:55:36] 2026-01-09 17:54:33,273 | INFO     | --------------------------------------------------
[2026-01-09 18:55:36] 2026-01-09 17:54:33,273 | INFO     | PanDA job id: 6963155444
[2026-01-09 18:55:36] 2026-01-09 17:54:33,273 | INFO     | task id: 47898826
[2026-01-09 18:55:36] 2026-01-09 17:54:33,273 | INFO     | errors: (none)
[2026-01-09 18:55:36] 2026-01-09 17:54:33,273 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:55:36] 2026-01-09 17:54:33,273 | INFO     | pilot state: finished 
[2026-01-09 18:55:36] 2026-01-09 17:54:33,273 | INFO     | transexitcode: 0
[2026-01-09 18:55:36] 2026-01-09 17:54:33,273 | INFO     | exeerrorcode: 0
[2026-01-09 18:55:36] 2026-01-09 17:54:33,273 | INFO     | exeerrordiag: 
[2026-01-09 18:55:36] 2026-01-09 17:54:33,273 | INFO     | exitcode: 0
[2026-01-09 18:55:36] 2026-01-09 17:54:33,273 | INFO     | exitmsg: OK
[2026-01-09 18:55:36] 2026-01-09 17:54:33,273 | INFO     | cpuconsumptiontime: 22940 s
[2026-01-09 18:55:36] 2026-01-09 17:54:33,273 | INFO     | nevents: 400
[2026-01-09 18:55:36] 2026-01-09 17:54:33,274 | INFO     | neventsw: 0
[2026-01-09 18:55:36] 2026-01-09 17:54:33,274 | INFO     | pid: 2354798
[2026-01-09 18:55:36] 2026-01-09 17:54:33,274 | INFO     | pgrp: 2354798
[2026-01-09 18:55:36] 2026-01-09 17:54:33,274 | INFO     | corecount: 4
[2026-01-09 18:55:36] 2026-01-09 17:54:33,274 | INFO     | event service: False
[2026-01-09 18:55:36] 2026-01-09 17:54:33,274 | INFO     | sizes: {0: 2283747, 1: 2284002, 4: 2284264, 11: 2284292, 5991: 2311208, 5992: 2320396, 5996: 2320534}
[2026-01-09 18:55:36] 2026-01-09 17:54:33,274 | INFO     | --------------------------------------------------
[2026-01-09 18:55:36] 2026-01-09 17:54:33,274 | INFO     | 
[2026-01-09 18:55:36] 2026-01-09 17:54:33,274 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-09 18:55:36] 2026-01-09 17:54:33,292 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,292 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,292 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,292 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,292 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,292 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,292 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,292 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,292 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,293 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:55:36] 2026-01-09 17:54:33,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,293 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:55:36] 2026-01-09 17:54:33,293 | INFO     | job 6963155444 has completed (purged errors)
[2026-01-09 18:55:36] 2026-01-09 17:54:33,293 | INFO     | overall cleanup function is called
[2026-01-09 18:55:36] 2026-01-09 17:54:34,300 | INFO     | --- collectZombieJob: --- 10, [2354798]
[2026-01-09 18:55:36] 2026-01-09 17:54:34,300 | INFO     | zombie collector waiting for pid 2354798
[2026-01-09 18:55:36] 2026-01-09 17:54:34,300 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:55:36] 2026-01-09 17:54:34,300 | INFO     | collected zombie processes
[2026-01-09 18:55:36] 2026-01-09 17:54:34,300 | INFO     | will attempt to kill all subprocesses of pid=2354798
[2026-01-09 18:55:36] 2026-01-09 17:54:34,340 | INFO     | process IDs to be killed: [2354798] (in reverse order)
[2026-01-09 18:55:36] 2026-01-09 17:54:34,371 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:55:36] 2026-01-09 17:54:34,371 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:55:36] 2026-01-09 17:54:34,372 | INFO     | did not find any defunct processes belonging to 2354798
[2026-01-09 18:55:36] 2026-01-09 17:54:34,374 | INFO     | did not find any defunct processes belonging to 2354798
[2026-01-09 18:55:36] 2026-01-09 17:54:34,374 | INFO     | ready for new job
[2026-01-09 18:55:36] 2026-01-09 17:54:34,374 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:55:36] 2026-01-09 17:54:34,375 | INFO     | ***************************************
[2026-01-09 18:55:36] 2026-01-09 17:54:34,375 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:55:36] 2026-01-09 17:54:34,375 | INFO     | ***************************************
[2026-01-09 18:55:36] 2026-01-09 17:54:34,375 | INFO     | 
[2026-01-09 18:55:36] 2026-01-09 17:54:34,375 | INFO     | architecture information:
[2026-01-09 18:55:36] 2026-01-09 17:54:34,375 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:55:36] 2026-01-09 17:54:34,388 | INFO     | cat /etc/os-release:
[2026-01-09 18:55:36] NAME="CentOS Linux"
[2026-01-09 18:55:36] VERSION="7 (Core)"
[2026-01-09 18:55:36] ID="centos"
[2026-01-09 18:55:36] ID_LIKE="rhel fedora"
[2026-01-09 18:55:36] VERSION_ID="7"
[2026-01-09 18:55:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:55:36] ANSI_COLOR="0;31"
[2026-01-09 18:55:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:55:36] HOME_URL="https://www.centos.org/"
[2026-01-09 18:55:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:55:36] 
[2026-01-09 18:55:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:55:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:55:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:55:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:55:36] 
[2026-01-09 18:55:36] 2026-01-09 17:54:34,389 | INFO     | ***************************************
[2026-01-09 18:55:36] 2026-01-09 17:54:34,892 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 18:55:36] 2026-01-09 17:54:34,909 | INFO     | sufficient remaining disk space (239796748288 B)
[2026-01-09 18:55:36] 2026-01-09 17:54:34,909 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:55:36] 2026-01-09 17:54:34,909 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:55:36] 2026-01-09 17:54:34,909 | INFO     | update_server=False
[2026-01-09 18:55:36] 2026-01-09 17:54:34,909 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:55:36] 2026-01-09 17:54:34,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:55:36] 2026-01-09 17:54:34,961 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:55:36] 2026-01-09 17:54:35,149 | INFO     | all payload control threads have been joined
[2026-01-09 18:55:36] 2026-01-09 17:54:35,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:55:36] 2026-01-09 17:54:35,469 | INFO     | aborting loop
[2026-01-09 18:55:36] 2026-01-09 17:54:35,495 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:55:36] 2026-01-09 17:54:35,704 | INFO     | all data control threads have been joined
[2026-01-09 18:55:36] 2026-01-09 17:54:35,810 | INFO     | all job control threads have been joined
[2026-01-09 18:55:36] 2026-01-09 17:54:35,914 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:55:36] 2026-01-09 17:54:35,915 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:55:36] 2026-01-09 17:54:36,155 | INFO     | [payload] control thread has finished
[2026-01-09 18:55:36] 2026-01-09 17:54:36,168 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:55:36] 2026-01-09 17:54:36,274 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:55:36] 2026-01-09 17:54:36,348 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:55:36] 2026-01-09 17:54:36,475 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:55:36] 2026-01-09 17:54:36,710 | INFO     | [data] control thread has finished
[2026-01-09 18:55:36] 2026-01-09 17:54:36,816 | INFO     | [job] control thread has finished
[2026-01-09 18:55:36] 2026-01-09 17:54:36,880 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:55:36] 2026-01-09 17:54:36,968 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:55:36] 2026-01-09 17:54:37,090 | INFO     | [job] validate thread has finished
[2026-01-09 18:55:36] 2026-01-09 17:54:37,307 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:55:36] 2026-01-09 17:54:37,379 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:55:36] 2026-01-09 17:54:37,421 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:55:36] 2026-01-09 17:54:39,502 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:55:36] 2026-01-09 17:55:05,371 | INFO     | PID=2348210 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 18:55:36] 2026-01-09 17:55:05,371 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:55:36] 2026-01-09 17:55:05,371 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:55:36] 2026-01-09 17:55:05,371 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:55:36] 2026-01-09 17:55:30,825 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:55:36] 2026-01-09 17:55:31,085 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140684871030592)>', '<ExcThread(monitor, started 140684354885376)>']
[2026-01-09 18:55:36] 2026-01-09 17:55:31,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:55:36] 2026-01-09 17:55:31,507 | INFO     | [monitor] control thread has ended
[2026-01-09 18:55:36] 2026-01-09 17:55:36,110 | INFO     | all workflow threads have been joined
[2026-01-09 18:55:36] 2026-01-09 17:55:36,110 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:55:36] 2026-01-09 17:55:36,111 | INFO     | traces error code: 0
[2026-01-09 18:55:36] 2026-01-09 17:55:36,111 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:55:36] 2026-01-09 17:55:36,191 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:55:36] 2026-01-09 17:55:36,195 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:55:36] 2026-01-09 17:55:36,199 [wrapper] pilotpid: 2348210
[2026-01-09 18:55:36] 2026-01-09 17:55:36,203 [wrapper] Pilot exit status: 0
[2026-01-09 18:55:36] 2026-01-09 17:55:36,214 [wrapper] pandaids: 6963155444
[2026-01-09 18:55:36] 2026-01-09 17:55:36,235 [wrapper] cleanup supervisor_pilot 2366946 2348211
[2026-01-09 18:55:36] 2026-01-09 17:55:36,238 [wrapper] Test setup, not cleaning
[2026-01-09 18:55:36] 2026-01-09 17:55:36,242 [wrapper] apfmon messages muted
[2026-01-09 18:55:36] 2026-01-09 17:55:36,245 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:55:36] 2026-01-09 17:55:36,249 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:55:36]  *** Error codes and diagnostics ***
[2026-01-09 18:55:36]     "exeErrorCode": 0,
[2026-01-09 18:55:36]     "exeErrorDiag": "",
[2026-01-09 18:55:36]     "pilotErrorCode": 0,
[2026-01-09 18:55:36]     "pilotErrorDiag": "",
[2026-01-09 18:55:36]  *** Listing of results directory ***
[2026-01-09 18:55:36] total 447796
[2026-01-09 18:55:36] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 18:55:36] -rwx------ 1 boinc boinc     36322 Jan  8 20:06 runpilot2-wrapper.sh
[2026-01-09 18:55:36] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:07 queuedata.json
[2026-01-09 18:55:36] -rw-r--r-- 1 boinc boinc       100 Jan  9 17:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:55:36] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 17:14 run_atlas
[2026-01-09 18:55:36] -rw-r--r-- 1 boinc boinc       105 Jan  9 17:14 job.xml
[2026-01-09 18:55:36] -rw-r--r-- 2 boinc boinc 224445456 Jan  9 17:14 EVNT.47898824._001188.pool.root.1
[2026-01-09 18:55:36] -rw-r--r-- 2 boinc boinc    592392 Jan  9 17:14 input.tar.gz
[2026-01-09 18:55:36] -rw-r--r-- 2 boinc boinc     15847 Jan  9 17:14 start_atlas.sh
[2026-01-09 18:55:36] drwxrwx--x 2 boinc boinc      4096 Jan  9 17:14 shared
[2026-01-09 18:55:36] -rw-r--r-- 1 boinc boinc         0 Jan  9 17:14 boinc_setup_complete
[2026-01-09 18:55:36] -rw-r--r-- 1 boinc boinc      6377 Jan  9 17:14 init_data.xml
[2026-01-09 18:55:36] -rw-r--r-- 1 boinc boinc         0 Jan  9 17:14 boinc_lockfile
[2026-01-09 18:55:36] -rw-r--r-- 1 boinc boinc      2520 Jan  9 17:14 pandaJob.out
[2026-01-09 18:55:36] -rw------- 1 boinc boinc    989356 Jan  9 17:14 agis_schedconf.cvmfs.json
[2026-01-09 18:55:36] -rw------- 1 boinc boinc   1516240 Jan  9 17:14 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:55:36] drwx------ 5 boinc boinc      4096 Jan  9 17:14 pilot3
[2026-01-09 18:55:36] -rw------- 1 boinc boinc 227848758 Jan  9 18:54 HITS.47898826._030694.pool.root.1
[2026-01-09 18:55:36] -rw-r--r-- 1 boinc boinc       529 Jan  9 18:54 boinc_task_state.xml
[2026-01-09 18:55:36] -rw------- 1 boinc boinc      1020 Jan  9 18:54 memory_monitor_summary.json
[2026-01-09 18:55:36] -rw------- 1 boinc boinc    294031 Jan  9 18:54 log.47898826._030694.job.log.tgz.1
[2026-01-09 18:55:36] -rw------- 1 boinc boinc      7767 Jan  9 18:54 heartbeat.json
[2026-01-09 18:55:36] -rw------- 1 boinc boinc        95 Jan  9 18:55 pilot_heartbeat.json
[2026-01-09 18:55:36] -rw-r--r-- 1 boinc boinc      8192 Jan  9 18:55 boinc_mmap_file
[2026-01-09 18:55:36] -rw-r--r-- 1 boinc boinc        27 Jan  9 18:55 wrapper_checkpoint.txt
[2026-01-09 18:55:36] -rw------- 1 boinc boinc      4752 Jan  9 18:55 pilotlog.txt
[2026-01-09 18:55:36] -rw------- 1 boinc boinc    872378 Jan  9 18:55 log.47898826._030694.job.log.1
[2026-01-09 18:55:36] -rw------- 1 boinc boinc       357 Jan  9 18:55 output.list
[2026-01-09 18:55:36] -rw-r--r-- 1 boinc boinc       620 Jan  9 18:55 runtime_log
[2026-01-09 18:55:36] -rw------- 1 boinc boinc   1187840 Jan  9 18:55 result.tar.gz
[2026-01-09 18:55:36] -rw-r--r-- 1 boinc boinc      8902 Jan  9 18:55 runtime_log.err
[2026-01-09 18:55:36] -rw------- 1 boinc boinc       660 Jan  9 18:55 cyFKDmMWAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDyfKDm7FJ99n.diag
[2026-01-09 18:55:36] -rw-r--r-- 1 boinc boinc     21492 Jan  9 18:55 stderr.txt
[2026-01-09 18:55:36] HITS file was successfully produced:
[2026-01-09 18:55:36] -rw------- 1 boinc boinc 227848758 Jan  9 18:54 shared/HITS.pool.root.1
[2026-01-09 18:55:36]  *** Contents of shared directory: ***
[2026-01-09 18:55:36] total 443464
[2026-01-09 18:55:36] -rw-r--r-- 2 boinc boinc 224445456 Jan  9 17:14 ATLAS.root_0
[2026-01-09 18:55:36] -rw-r--r-- 2 boinc boinc    592392 Jan  9 17:14 input.tar.gz
[2026-01-09 18:55:36] -rw-r--r-- 2 boinc boinc     15847 Jan  9 17:14 start_atlas.sh
[2026-01-09 18:55:36] -rw------- 1 boinc boinc 227848758 Jan  9 18:54 HITS.pool.root.1
[2026-01-09 18:55:36] -rw------- 1 boinc boinc   1187840 Jan  9 18:55 result.tar.gz
18:55:38 (2344411): run_atlas exited; CPU time 22958.822564
18:55:38 (2344411): called boinc_finish(0)

</stderr_txt>
]]>

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