Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:19:56 (256649): wrapper (7.7.26015): starting
11:19:56 (256649): wrapper: running run_atlas (--nthreads 2)
[2026-01-09 11:19:56] Arguments: --nthreads 2
[2026-01-09 11:19:56] Threads: 2
[2026-01-09 11:19:56] Checking for CVMFS
[2026-01-09 11:19:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:19:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:19:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:19:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:19:56] 2.9.2.0 4183069 1392 54652 154940 2 56 21628278 36864001 0 130560 0 663602 99.984 53427 3877 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 11:19:56] CVMFS is ok
[2026-01-09 11:19:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:19:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:19:56] Further information can be found at the LHC@home message board.
[2026-01-09 11:19:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:19:56] Checking for apptainer binary...
[2026-01-09 11:19:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:19:56] Running /usr/bin/apptainer --version
[2026-01-09 11:19:56] apptainer version 1.4.1-1.1
[2026-01-09 11:19:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:19:56] thA389
[2026-01-09 11:19:56] apptainer works
[2026-01-09 11:19:56] Set ATHENA_PROC_NUMBER=2
[2026-01-09 11:19:56] Set ATHENA_CORE_NUMBER=2
[2026-01-09 11:19:56] Starting ATLAS job with PandaID=6963156161
[2026-01-09 11:19:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:09:27]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:09:27] 2026-01-09 13:08:49,198 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:09:27] 2026-01-09 13:08:49,221 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:09:27] 2026-01-09 13:08:49,389 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:09:27] 2026-01-09 13:08:49,393 | INFO     | [payload] control thread has finished
[2026-01-09 14:09:27] 2026-01-09 13:08:49,399 | INFO     | [job] validate thread has finished
[2026-01-09 14:09:27] 2026-01-09 13:08:49,498 | INFO     | [data] control thread has finished
[2026-01-09 14:09:27] 2026-01-09 13:08:49,598 | INFO     | [job] control thread has finished
[2026-01-09 14:09:27] 2026-01-09 13:08:49,602 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:09:27] 2026-01-09 13:08:49,621 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:09:27] 2026-01-09 13:08:49,867 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:09:27] 2026-01-09 13:08:50,091 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:09:27] 2026-01-09 13:08:52,833 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:09:27] 2026-01-09 13:08:58,546 | INFO     | job.realtimelogging is not enabled
[2026-01-09 14:09:27] 2026-01-09 13:08:59,552 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:09:27] 2026-01-09 13:09:17,162 | INFO     | PID=260362 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 14:09:27] 2026-01-09 13:09:17,162 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:09:27] 2026-01-09 13:09:17,162 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:09:27] 2026-01-09 13:09:17,162 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:09:27] 2026-01-09 13:09:21,293 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:09:27] 2026-01-09 13:09:22,299 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140640952641344)>', '<ExcThread(monitor, started 140640247609088)>']
[2026-01-09 14:09:27] 2026-01-09 13:09:23,194 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:09:27] 2026-01-09 13:09:23,195 | INFO     | [monitor] control thread has ended
[2026-01-09 14:09:27] 2026-01-09 13:09:27,304 | INFO     | all workflow threads have been joined
[2026-01-09 14:09:27] 2026-01-09 13:09:27,305 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:09:27] 2026-01-09 13:09:27,306 | INFO     | traces error code: 0
[2026-01-09 14:09:27] 2026-01-09 13:09:27,306 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:09:27] 2026-01-09 13:09:27,349 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:09:27] 2026-01-09 13:09:27,351 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:09:27] 2026-01-09 13:09:27,354 [wrapper] pilotpid: 260362
[2026-01-09 14:09:27] 2026-01-09 13:09:27,356 [wrapper] Pilot exit status: 0
[2026-01-09 14:09:27] 2026-01-09 13:09:27,362 [wrapper] pandaids: 6963156161
[2026-01-09 14:09:27] 2026-01-09 13:09:27,373 [wrapper] cleanup supervisor_pilot  291259 260363
[2026-01-09 14:09:27] 2026-01-09 13:09:27,375 [wrapper] Test setup, not cleaning
[2026-01-09 14:09:27] 2026-01-09 13:09:27,377 [wrapper] apfmon messages muted
[2026-01-09 14:09:27] 2026-01-09 13:09:27,379 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:09:27] 2026-01-09 13:09:27,381 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:09:27]  *** Error codes and diagnostics ***
[2026-01-09 14:09:27]     "exeErrorCode": 0,
[2026-01-09 14:09:27]     "exeErrorDiag": "",
[2026-01-09 14:09:27]     "pilotErrorCode": 0,
[2026-01-09 14:09:27]     "pilotErrorDiag": "",
[2026-01-09 14:09:27]  *** Listing of results directory ***
[2026-01-09 14:09:27] total 438048
[2026-01-09 14:09:27] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 14:09:27] -rwx------ 1 boinc boinc     36322 Jan  8 20:07 runpilot2-wrapper.sh
[2026-01-09 14:09:27] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:07 queuedata.json
[2026-01-09 14:09:27] -rw-r--r-- 1 boinc boinc       100 Jan  9 11:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:09:27] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 11:19 run_atlas
[2026-01-09 14:09:27] -rw-r--r-- 1 boinc boinc       105 Jan  9 11:19 job.xml
[2026-01-09 14:09:27] -rw-r--r-- 2 boinc boinc 222055368 Jan  9 11:19 EVNT.47898824._000893.pool.root.1
[2026-01-09 14:09:27] -rw-r--r-- 2 boinc boinc    592394 Jan  9 11:19 input.tar.gz
[2026-01-09 14:09:27] -rw-r--r-- 2 boinc boinc     15847 Jan  9 11:19 start_atlas.sh
[2026-01-09 14:09:27] drwxrwx--x 2 boinc boinc      4096 Jan  9 11:19 shared
[2026-01-09 14:09:27] -rw-r--r-- 1 boinc boinc         0 Jan  9 11:19 boinc_setup_complete
[2026-01-09 14:09:27] -rw-r--r-- 1 boinc boinc      6281 Jan  9 11:19 init_data.xml
[2026-01-09 14:09:27] -rw-r--r-- 1 boinc boinc         0 Jan  9 11:19 boinc_lockfile
[2026-01-09 14:09:27] -rw-r--r-- 1 boinc boinc      2518 Jan  9 11:19 pandaJob.out
[2026-01-09 14:09:27] -rw------- 1 boinc boinc    989369 Jan  9 11:20 agis_schedconf.cvmfs.json
[2026-01-09 14:09:27] -rw------- 1 boinc boinc   1516240 Jan  9 11:20 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:09:27] drwx------ 5 boinc boinc      4096 Jan  9 11:20 pilot3
[2026-01-09 14:09:27] -rw------- 1 boinc boinc 219103067 Jan  9 14:08 HITS.47898826._031338.pool.root.1
[2026-01-09 14:09:27] -rw-r--r-- 1 boinc boinc       531 Jan  9 14:08 boinc_task_state.xml
[2026-01-09 14:09:27] -rw------- 1 boinc boinc      1014 Jan  9 14:08 memory_monitor_summary.json
[2026-01-09 14:09:27] -rw------- 1 boinc boinc    314288 Jan  9 14:08 log.47898826._031338.job.log.tgz.1
[2026-01-09 14:09:27] -rw------- 1 boinc boinc      7756 Jan  9 14:08 heartbeat.json
[2026-01-09 14:09:27] -rw-r--r-- 1 boinc boinc        28 Jan  9 14:09 wrapper_checkpoint.txt
[2026-01-09 14:09:27] -rw-r--r-- 1 boinc boinc      8192 Jan  9 14:09 boinc_mmap_file
[2026-01-09 14:09:27] -rw------- 1 boinc boinc        95 Jan  9 14:09 pilot_heartbeat.json
[2026-01-09 14:09:27] -rw------- 1 boinc boinc      5009 Jan  9 14:09 pilotlog.txt
[2026-01-09 14:09:27] -rw------- 1 boinc boinc   1438060 Jan  9 14:09 log.47898826._031338.job.log.1
[2026-01-09 14:09:27] -rw------- 1 boinc boinc       357 Jan  9 14:09 output.list
[2026-01-09 14:09:27] -rw-r--r-- 1 boinc boinc       620 Jan  9 14:09 runtime_log
[2026-01-09 14:09:27] -rw------- 1 boinc boinc   1771520 Jan  9 14:09 result.tar.gz
[2026-01-09 14:09:27] -rw-r--r-- 1 boinc boinc      8898 Jan  9 14:09 runtime_log.err
[2026-01-09 14:09:27] -rw------- 1 boinc boinc       661 Jan  9 14:09 JvFNDmhWAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGFlKDmtQzWJm.diag
[2026-01-09 14:09:27] -rw-r--r-- 1 boinc boinc      6097 Jan  9 14:09 stderr.txt
[2026-01-09 14:09:27] HITS file was successfully produced:
[2026-01-09 14:09:27] -rw------- 1 boinc boinc 219103067 Jan  9 14:08 shared/HITS.pool.root.1
[2026-01-09 14:09:27]  *** Contents of shared directory: ***
[2026-01-09 14:09:27] total 433156
[2026-01-09 14:09:27] -rw-r--r-- 2 boinc boinc 222055368 Jan  9 11:19 ATLAS.root_0
[2026-01-09 14:09:27] -rw-r--r-- 2 boinc boinc    592394 Jan  9 11:19 input.tar.gz
[2026-01-09 14:09:27] -rw-r--r-- 2 boinc boinc     15847 Jan  9 11:19 start_atlas.sh
[2026-01-09 14:09:27] -rw------- 1 boinc boinc 219103067 Jan  9 14:08 HITS.pool.root.1
[2026-01-09 14:09:27] -rw------- 1 boinc boinc   1771520 Jan  9 14:09 result.tar.gz
14:09:28 (256649): run_atlas exited; CPU time 19847.791189
14:09:28 (256649): called boinc_finish(0)

</stderr_txt>
]]>

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