Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:48:01 (24437): wrapper (7.7.26015): starting
20:48:01 (24437): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 20:48:01] Arguments: --nthreads 3
[2026-01-09 20:48:01] Threads: 3
[2026-01-09 20:48:01] Checking for CVMFS
[2026-01-09 20:48:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:48:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:48:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:48:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:48:01] 2.9.2.0 185998 137274 109020 154955 3 57 20258497 36864000 12 130560 1 42718906 99.970 4684241 1605 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 20:48:01] CVMFS is ok
[2026-01-09 20:48:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:48:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:48:01] Further information can be found at the LHC@home message board.
[2026-01-09 20:48:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:48:01] Checking for apptainer binary...
[2026-01-09 20:48:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:48:01] Running /usr/bin/apptainer --version
[2026-01-09 20:48:01] apptainer version 1.4.1-1.1
[2026-01-09 20:48:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:48:01] thA387a
[2026-01-09 20:48:01] apptainer works
[2026-01-09 20:48:01] Set ATHENA_PROC_NUMBER=3
[2026-01-09 20:48:01] Set ATHENA_CORE_NUMBER=3
[2026-01-09 20:48:01] Starting ATLAS job with PandaID=6963155728
[2026-01-09 20:48:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:40:21]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:40:21] 2026-01-09 21:39:19,727 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 22:40:21] 2026-01-09 21:39:19,727 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:40:21] 2026-01-09 21:39:19,727 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:40:21] 2026-01-09 21:39:19,727 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:40:21] 2026-01-09 21:39:19,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:40:21] 2026-01-09 21:39:19,727 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:40:21] 2026-01-09 21:39:19,727 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:40:21] 2026-01-09 21:39:19,953 | INFO     | all job control threads have been joined
[2026-01-09 22:40:21] 2026-01-09 21:39:20,056 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 22:40:21] 2026-01-09 21:39:20,056 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 22:40:21] 2026-01-09 21:39:20,056 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:40:21] 2026-01-09 21:39:20,056 | INFO     | will abort loop
[2026-01-09 22:40:21] 2026-01-09 21:39:20,253 | INFO     | all data control threads have been joined
[2026-01-09 22:40:21] 2026-01-09 21:39:20,732 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:40:21] 2026-01-09 21:39:20,733 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:40:21] 2026-01-09 21:39:20,959 | INFO     | [job] control thread has finished
[2026-01-09 22:40:21] 2026-01-09 21:39:21,062 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:40:21] 2026-01-09 21:39:21,098 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:40:21] 2026-01-09 21:39:21,125 | INFO     | [job] validate thread has finished
[2026-01-09 22:40:21] 2026-01-09 21:39:21,128 | INFO     | all payload control threads have been joined
[2026-01-09 22:40:21] 2026-01-09 21:39:21,259 | INFO     | [data] control thread has finished
[2026-01-09 22:40:21] 2026-01-09 21:39:21,289 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:40:21] 2026-01-09 21:39:21,292 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:40:21] 2026-01-09 21:39:21,293 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:40:21] 2026-01-09 21:39:21,300 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:40:21] 2026-01-09 21:39:21,733 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:40:21] 2026-01-09 21:39:21,843 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:40:21] 2026-01-09 21:39:22,125 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:40:21] 2026-01-09 21:39:22,133 | INFO     | [payload] control thread has finished
[2026-01-09 22:40:21] 2026-01-09 21:39:23,732 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:40:21] 2026-01-09 21:40:14,698 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:40:21] 2026-01-09 21:40:15,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140254688032576)>', '<ExcThread(monitor, started 140254203852544)>']
[2026-01-09 22:40:21] 2026-01-09 21:40:16,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:40:21] 2026-01-09 21:40:16,017 | INFO     | [monitor] control thread has ended
[2026-01-09 22:40:21] 2026-01-09 21:40:20,893 | INFO     | all workflow threads have been joined
[2026-01-09 22:40:21] 2026-01-09 21:40:20,894 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:40:21] 2026-01-09 21:40:20,894 | INFO     | traces error code: 0
[2026-01-09 22:40:21] 2026-01-09 21:40:20,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:40:21] 2026-01-09 21:40:20,943 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:40:21] 2026-01-09 21:40:20,945 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:40:21] 2026-01-09 21:40:20,947 [wrapper] pilotpid: 28163
[2026-01-09 22:40:21] 2026-01-09 21:40:20,950 [wrapper] Pilot exit status: 0
[2026-01-09 22:40:21] 2026-01-09 21:40:20,957 [wrapper] pandaids: 6963155728
[2026-01-09 22:40:21] 2026-01-09 21:40:20,973 [wrapper] cleanup supervisor_pilot   49016 28164
[2026-01-09 22:40:21] 2026-01-09 21:40:20,976 [wrapper] Test setup, not cleaning
[2026-01-09 22:40:21] 2026-01-09 21:40:20,978 [wrapper] apfmon messages muted
[2026-01-09 22:40:21] 2026-01-09 21:40:20,980 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:40:21] 2026-01-09 21:40:20,982 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:40:21]  *** Error codes and diagnostics ***
[2026-01-09 22:40:21]     "exeErrorCode": 0,
[2026-01-09 22:40:21]     "exeErrorDiag": "",
[2026-01-09 22:40:21]     "pilotErrorCode": 0,
[2026-01-09 22:40:21]     "pilotErrorDiag": "",
[2026-01-09 22:40:21]  *** Listing of results directory ***
[2026-01-09 22:40:21] total 436628
[2026-01-09 22:40:21] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 22:40:21] -rwx------ 1 boinc boinc     36322 Jan  8 20:06 runpilot2-wrapper.sh
[2026-01-09 22:40:21] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:07 queuedata.json
[2026-01-09 22:40:21] -rw-r--r-- 1 boinc boinc       100 Jan  9 20:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:40:21] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 20:48 run_atlas
[2026-01-09 22:40:21] -rw-r--r-- 1 boinc boinc       105 Jan  9 20:48 job.xml
[2026-01-09 22:40:21] -rw-r--r-- 2 boinc boinc 223998163 Jan  9 20:48 EVNT.47898824._001199.pool.root.1
[2026-01-09 22:40:21] -rw-r--r-- 2 boinc boinc    592389 Jan  9 20:48 input.tar.gz
[2026-01-09 22:40:21] -rw-r--r-- 2 boinc boinc     15847 Jan  9 20:48 start_atlas.sh
[2026-01-09 22:40:21] drwxrwx--x 2 boinc boinc      4096 Jan  9 20:48 shared
[2026-01-09 22:40:21] -rw-r--r-- 1 boinc boinc         0 Jan  9 20:48 boinc_setup_complete
[2026-01-09 22:40:21] -rw-r--r-- 1 boinc boinc      6440 Jan  9 20:48 init_data.xml
[2026-01-09 22:40:21] -rw-r--r-- 1 boinc boinc         0 Jan  9 20:48 boinc_lockfile
[2026-01-09 22:40:21] -rw-r--r-- 1 boinc boinc      2518 Jan  9 20:48 pandaJob.out
[2026-01-09 22:40:21] -rw------- 1 boinc boinc    989364 Jan  9 20:48 agis_schedconf.cvmfs.json
[2026-01-09 22:40:21] -rw------- 1 boinc boinc   1516240 Jan  9 20:48 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:40:21] drwx------ 5 boinc boinc      4096 Jan  9 20:48 pilot3
[2026-01-09 22:40:21] -rw------- 1 boinc boinc        95 Jan  9 22:38 pilot_heartbeat.json
[2026-01-09 22:40:21] -rw------- 1 boinc boinc 216751625 Jan  9 22:38 HITS.47898826._030950.pool.root.1
[2026-01-09 22:40:21] -rw-r--r-- 1 boinc boinc       530 Jan  9 22:39 boinc_task_state.xml
[2026-01-09 22:40:21] -rw------- 1 boinc boinc      1022 Jan  9 22:39 memory_monitor_summary.json
[2026-01-09 22:40:21] -rw------- 1 boinc boinc    268374 Jan  9 22:39 log.47898826._030950.job.log.tgz.1
[2026-01-09 22:40:21] -rw------- 1 boinc boinc      7771 Jan  9 22:39 heartbeat.json
[2026-01-09 22:40:21] -rw-r--r-- 1 boinc boinc        27 Jan  9 22:40 wrapper_checkpoint.txt
[2026-01-09 22:40:21] -rw-r--r-- 1 boinc boinc      8192 Jan  9 22:40 boinc_mmap_file
[2026-01-09 22:40:21] -rw------- 1 boinc boinc      4742 Jan  9 22:40 pilotlog.txt
[2026-01-09 22:40:21] -rw------- 1 boinc boinc    961327 Jan  9 22:40 log.47898826._030950.job.log.1
[2026-01-09 22:40:21] -rw------- 1 boinc boinc       357 Jan  9 22:40 output.list
[2026-01-09 22:40:21] -rw-r--r-- 1 boinc boinc       620 Jan  9 22:40 runtime_log
[2026-01-09 22:40:21] -rw------- 1 boinc boinc   1249280 Jan  9 22:40 result.tar.gz
[2026-01-09 22:40:21] -rw-r--r-- 1 boinc boinc      8902 Jan  9 22:40 runtime_log.err
[2026-01-09 22:40:21] -rw------- 1 boinc boinc       660 Jan  9 22:40 jheNDmVWAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLDlKDmP4J4Jo.diag
[2026-01-09 22:40:21] -rw-r--r-- 1 boinc boinc      7345 Jan  9 22:40 stderr.txt
[2026-01-09 22:40:21] HITS file was successfully produced:
[2026-01-09 22:40:21] -rw------- 1 boinc boinc 216751625 Jan  9 22:38 shared/HITS.pool.root.1
[2026-01-09 22:40:21]  *** Contents of shared directory: ***
[2026-01-09 22:40:21] total 432248
[2026-01-09 22:40:21] -rw-r--r-- 2 boinc boinc 223998163 Jan  9 20:48 ATLAS.root_0
[2026-01-09 22:40:21] -rw-r--r-- 2 boinc boinc    592389 Jan  9 20:48 input.tar.gz
[2026-01-09 22:40:21] -rw-r--r-- 2 boinc boinc     15847 Jan  9 20:48 start_atlas.sh
[2026-01-09 22:40:21] -rw------- 1 boinc boinc 216751625 Jan  9 22:38 HITS.pool.root.1
[2026-01-09 22:40:21] -rw------- 1 boinc boinc   1249280 Jan  9 22:40 result.tar.gz
22:40:22 (24437): run_atlas exited; CPU time 19264.237173
22:40:22 (24437): called boinc_finish(0)

</stderr_txt>
]]>

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