Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:19:00 (319553): wrapper (7.7.26015): starting
00:19:00 (319553): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:19:00] Arguments: --nthreads 8
[2026-01-09 00:19:00] Threads: 8
[2026-01-09 00:19:00] Checking for CVMFS
[2026-01-09 00:19:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:19:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:19:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:19:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:19:02] 2.13.3.0 13122 92982 358264 154933 0 68 23087060 32935937 18487 16776704 0 353601259 99.518 459814260 35975 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:19:02] CVMFS is ok
[2026-01-09 00:19:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:19:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:19:02] Further information can be found at the LHC@home message board.
[2026-01-09 00:19:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:19:02] Checking for apptainer binary...
[2026-01-09 00:19:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:19:02] Running /usr/bin/apptainer --version
[2026-01-09 00:19:02] apptainer version 1.4.5-2.el9
[2026-01-09 00:19:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:19:03] c6-8-25-2.aglt2.org
[2026-01-09 00:19:03] apptainer works
[2026-01-09 00:19:03] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:19:03] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:19:03] Starting ATLAS job with PandaID=6963155275
[2026-01-09 00:19:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:21:03]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:21:03] 2026-01-09 17:19:58,122 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2674.4128124999997
[2026-01-09 12:21:03] 2026-01-09 17:19:58,275 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963155275/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:21:03] 2026-01-09 17:19:58,277 | INFO     | extracted standard info from prmon json
[2026-01-09 12:21:03] 2026-01-09 17:19:58,277 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:21:03] 2026-01-09 17:19:58,277 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:21:03] 2026-01-09 17:19:58,277 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:21:03] 2026-01-09 17:19:58,277 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:21:03] 2026-01-09 17:19:58,304 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:21:03] 2026-01-09 17:19:58,309 | INFO     | sum of square deviations: 108650761282.837
[2026-01-09 12:21:03] 2026-01-09 17:19:58,338 | INFO     | sum of deviations: 688927081731.6746
[2026-01-09 12:21:03] 2026-01-09 17:19:58,339 | INFO     | mean x: 1767957683.822695
[2026-01-09 12:21:03] 2026-01-09 17:19:58,339 | INFO     | mean y: 2460755.245390071
[2026-01-09 12:21:03] 2026-01-09 17:19:58,339 | INFO     | intersect: -11207713139.168547
[2026-01-09 12:21:03] 2026-01-09 17:19:58,340 | INFO     | chi2: 7.5100733395821875
[2026-01-09 12:21:03] 2026-01-09 17:19:58,341 | INFO     | sum of square deviations: 106355509094.42715
[2026-01-09 12:21:03] 2026-01-09 17:19:58,392 | INFO     | sum of deviations: 776220951974.2281
[2026-01-09 12:21:03] 2026-01-09 17:19:58,392 | INFO     | mean x: 1767957531.3285713
[2026-01-09 12:21:03] 2026-01-09 17:19:58,392 | INFO     | mean y: 2466528.6685714284
[2026-01-09 12:21:03] 2026-01-09 17:19:58,392 | INFO     | intersect: -12900726636.430738
[2026-01-09 12:21:03] 2026-01-09 17:19:58,393 | INFO     | chi2: 6.008150859495654
[2026-01-09 12:21:03] 2026-01-09 17:19:58,393 | INFO     | current chi2=6.008150859495654 (change=19.998772477634567 %)
[2026-01-09 12:21:03] 2026-01-09 17:19:58,393 | INFO     | right removable region: 699
[2026-01-09 12:21:03] 2026-01-09 17:19:58,394 | INFO     | sum of square deviations: 106355155294.42719
[2026-01-09 12:21:03] 2026-01-09 17:19:58,416 | INFO     | sum of deviations: 468461737042.77185
[2026-01-09 12:21:03] 2026-01-09 17:19:58,416 | INFO     | mean x: 1767957836.3285713
[2026-01-09 12:21:03] 2026-01-09 17:19:58,421 | INFO     | mean y: 2475393.931428571
[2026-01-09 12:21:03] 2026-01-09 17:19:58,421 | INFO     | intersect: -7784834931.85454
[2026-01-09 12:21:03] 2026-01-09 17:19:58,422 | INFO     | chi2: 3.9108019707133033
[2026-01-09 12:21:03] 2026-01-09 17:19:58,422 | INFO     | current chi2=3.9108019707133033 (change=47.92591504930795 %)
[2026-01-09 12:21:03] 2026-01-09 17:19:58,423 | INFO     | sum of square deviations: 104092193335.30359
[2026-01-09 12:21:03] 2026-01-09 17:19:58,535 | INFO     | sum of deviations: 327794801789.499
[2026-01-09 12:21:03] 2026-01-09 17:19:58,536 | INFO     | mean x: 1767957988.8316548
[2026-01-09 12:21:03] 2026-01-09 17:19:58,536 | INFO     | mean y: 2484866.713669065
[2026-01-09 12:21:03] 2026-01-09 17:19:58,536 | INFO     | intersect: -5564958953.539495
[2026-01-09 12:21:03] 2026-01-09 17:19:58,537 | INFO     | chi2: 2.5028712897400975
[2026-01-09 12:21:03] 2026-01-09 17:19:58,537 | INFO     | current chi2=2.5028712897400975 (change=36.00107322019194 %)
[2026-01-09 12:21:03] 2026-01-09 17:19:58,542 | INFO     | sum of square deviations: 101861599591.33325
[2026-01-09 12:21:03] 2026-01-09 17:19:58,584 | INFO     | sum of deviations: 255176546590.33286
[2026-01-09 12:21:03] 2026-01-09 17:19:58,584 | INFO     | mean x: 1767958141.3333333
[2026-01-09 12:21:03] 2026-01-09 17:19:58,584 | INFO     | mean y: 2489830.5028985506
[2026-01-09 12:21:03] 2026-01-09 17:19:58,584 | INFO     | intersect: -4426475106.545747
[2026-01-09 12:21:03] 2026-01-09 17:19:58,589 | INFO     | chi2: 2.168539780572203
[2026-01-09 12:21:03] 2026-01-09 17:19:58,590 | INFO     | current chi2=2.168539780572203 (change=13.357918584883052 %)
[2026-01-09 12:21:03] 2026-01-09 17:19:58,618 | INFO     | left removable region: 30
[2026-01-09 12:21:03] 2026-01-09 17:19:58,619 | INFO     | sum of square deviations: 92840919243.64424
[2026-01-09 12:21:03] 2026-01-09 17:19:58,643 | INFO     | sum of deviations: 235539468776.19586
[2026-01-09 12:21:03] 2026-01-09 17:19:58,643 | INFO     | mean x: 1767958415.8535128
[2026-01-09 12:21:03] 2026-01-09 17:19:58,643 | INFO     | mean y: 2503551.2571001495
[2026-01-09 12:21:03] 2026-01-09 17:19:58,643 | INFO     | intersect: -4482846114.397454
[2026-01-09 12:21:03] 2026-01-09 17:19:58,648 | INFO     | chi2: 0.40169175780701355
[2026-01-09 12:21:03] 2026-01-09 17:19:58,649 | INFO     | current memory leak: 2.54 B/s (using 669 data points, chi2=0.40)
[2026-01-09 12:21:03] 2026-01-09 17:19:58,651 | INFO     | could have reported an average CPU frequency of 2652 MHz (27 samples)
[2026-01-09 12:21:03] 2026-01-09 17:19:58,651 | INFO     | ..............................
[2026-01-09 12:21:03] 2026-01-09 17:19:58,651 | INFO     | . Timing measurements:
[2026-01-09 12:21:03] 2026-01-09 17:19:58,651 | INFO     | . get job = 0 s
[2026-01-09 12:21:03] 2026-01-09 17:19:58,651 | INFO     | . initial setup = 8 s
[2026-01-09 12:21:03] 2026-01-09 17:19:58,651 | INFO     | . payload setup = 49 s
[2026-01-09 12:21:03] 2026-01-09 17:19:58,652 | INFO     | . stage-in = 0 s
[2026-01-09 12:21:03] 2026-01-09 17:19:58,652 | INFO     | . payload execution = 42989 s
[2026-01-09 12:21:03] 2026-01-09 17:19:58,652 | INFO     | . stage-out = 5 s
[2026-01-09 12:21:03] 2026-01-09 17:19:58,652 | INFO     | . log creation = 0 s
[2026-01-09 12:21:03] 2026-01-09 17:19:58,652 | INFO     | ..............................
[2026-01-09 12:21:03] 2026-01-09 17:19:59,039 | INFO     | PID=338770 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 12:21:03] 2026-01-09 17:19:59,040 | INFO     | .. there are 17 such processes running
[2026-01-09 12:21:03] 2026-01-09 17:19:59,107 | INFO     | 
[2026-01-09 12:21:03] 2026-01-09 17:19:59,108 | INFO     | job summary report
[2026-01-09 12:21:03] 2026-01-09 17:19:59,108 | INFO     | --------------------------------------------------
[2026-01-09 12:21:03] 2026-01-09 17:19:59,108 | INFO     | PanDA job id: 6963155275
[2026-01-09 12:21:03] 2026-01-09 17:19:59,108 | INFO     | task id: 47898826
[2026-01-09 12:21:03] 2026-01-09 17:19:59,108 | INFO     | errors: (none)
[2026-01-09 12:21:03] 2026-01-09 17:19:59,108 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:21:03] 2026-01-09 17:19:59,108 | INFO     | pilot state: finished 
[2026-01-09 12:21:03] 2026-01-09 17:19:59,108 | INFO     | transexitcode: 0
[2026-01-09 12:21:03] 2026-01-09 17:19:59,108 | INFO     | exeerrorcode: 0
[2026-01-09 12:21:03] 2026-01-09 17:19:59,108 | INFO     | exeerrordiag: 
[2026-01-09 12:21:03] 2026-01-09 17:19:59,108 | INFO     | exitcode: 0
[2026-01-09 12:21:03] 2026-01-09 17:19:59,108 | INFO     | exitmsg: OK
[2026-01-09 12:21:03] 2026-01-09 17:19:59,109 | INFO     | cpuconsumptiontime: 61148 s
[2026-01-09 12:21:03] 2026-01-09 17:19:59,109 | INFO     | nevents: 400
[2026-01-09 12:21:03] 2026-01-09 17:19:59,109 | INFO     | neventsw: 0
[2026-01-09 12:21:03] 2026-01-09 17:19:59,109 | INFO     | pid: 379361
[2026-01-09 12:21:03] 2026-01-09 17:19:59,109 | INFO     | pgrp: 379361
[2026-01-09 12:21:03] 2026-01-09 17:19:59,109 | INFO     | corecount: 8
[2026-01-09 12:21:03] 2026-01-09 17:19:59,109 | INFO     | event service: False
[2026-01-09 12:21:03] 2026-01-09 17:19:59,109 | INFO     | sizes: {0: 2283742, 1: 2283798, 2: 2283854, 3: 2284053, 15: 2284053, 26: 2284081, 37: 2284293, 38: 2284527, 48: 2284555, 43043: 2327677, 43049: 2336675, 43050: 233
[2026-01-09 12:21:03] 2026-01-09 17:19:59,109 | INFO     | --------------------------------------------------
[2026-01-09 12:21:03] 2026-01-09 17:19:59,109 | INFO     | 
[2026-01-09 12:21:03] 2026-01-09 17:19:59,109 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 12:21:03] 2026-01-09 17:19:59,194 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,194 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,194 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,194 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,194 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,194 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,194 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,195 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,195 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,195 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,195 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,195 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,195 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:21:03] 2026-01-09 17:19:59,195 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,196 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:21:03] 2026-01-09 17:19:59,196 | INFO     | job 6963155275 has completed (purged errors)
[2026-01-09 12:21:03] 2026-01-09 17:19:59,196 | INFO     | overall cleanup function is called
[2026-01-09 12:21:03] 2026-01-09 17:20:00,208 | INFO     | --- collectZombieJob: --- 10, [379361]
[2026-01-09 12:21:03] 2026-01-09 17:20:00,209 | INFO     | zombie collector waiting for pid 379361
[2026-01-09 12:21:03] 2026-01-09 17:20:00,209 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:21:03] 2026-01-09 17:20:00,209 | INFO     | collected zombie processes
[2026-01-09 12:21:03] 2026-01-09 17:20:00,209 | INFO     | will attempt to kill all subprocesses of pid=379361
[2026-01-09 12:21:03] 2026-01-09 17:20:01,431 | INFO     | process IDs to be killed: [379361] (in reverse order)
[2026-01-09 12:21:03] 2026-01-09 17:20:01,689 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:21:03] 2026-01-09 17:20:01,689 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:21:03] 2026-01-09 17:20:01,721 | INFO     | did not find any defunct processes belonging to 379361
[2026-01-09 12:21:03] 2026-01-09 17:20:01,737 | INFO     | did not find any defunct processes belonging to 379361
[2026-01-09 12:21:03] 2026-01-09 17:20:01,737 | INFO     | ready for new job
[2026-01-09 12:21:03] 2026-01-09 17:20:01,737 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:21:03] 2026-01-09 17:20:01,741 | INFO     | ***************************************
[2026-01-09 12:21:03] 2026-01-09 17:20:01,741 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:21:03] 2026-01-09 17:20:01,741 | INFO     | ***************************************
[2026-01-09 12:21:03] 2026-01-09 17:20:01,742 | INFO     | 
[2026-01-09 12:21:03] 2026-01-09 17:20:01,747 | INFO     | architecture information:
[2026-01-09 12:21:03] 2026-01-09 17:20:01,748 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:21:03] 2026-01-09 17:20:01,821 | INFO     | cat /etc/os-release:
[2026-01-09 12:21:03] NAME="CentOS Linux"
[2026-01-09 12:21:03] VERSION="7 (Core)"
[2026-01-09 12:21:03] ID="centos"
[2026-01-09 12:21:03] ID_LIKE="rhel fedora"
[2026-01-09 12:21:03] VERSION_ID="7"
[2026-01-09 12:21:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:21:03] ANSI_COLOR="0;31"
[2026-01-09 12:21:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:21:03] HOME_URL="https://www.centos.org/"
[2026-01-09 12:21:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:21:03] 
[2026-01-09 12:21:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:21:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:21:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:21:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:21:03] 
[2026-01-09 12:21:03] 2026-01-09 17:20:01,821 | INFO     | ***************************************
[2026-01-09 12:21:03] 2026-01-09 17:20:02,326 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 12:21:03] 2026-01-09 17:20:02,361 | INFO     | sufficient remaining disk space (73573335040 B)
[2026-01-09 12:21:03] 2026-01-09 17:20:02,362 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:21:03] 2026-01-09 17:20:02,362 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:21:03] 2026-01-09 17:20:02,362 | INFO     | update_server=False
[2026-01-09 12:21:03] 2026-01-09 17:20:02,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:21:03] 2026-01-09 17:20:02,362 | INFO     | all payload control threads have been joined
[2026-01-09 12:21:03] 2026-01-09 17:20:02,462 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:21:03] 2026-01-09 17:20:02,463 | INFO     | aborting loop
[2026-01-09 12:21:03] 2026-01-09 17:20:02,684 | INFO     | all job control threads have been joined
[2026-01-09 12:21:03] 2026-01-09 17:20:02,729 | INFO     | all data control threads have been joined
[2026-01-09 12:21:03] 2026-01-09 17:20:03,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:21:03] 2026-01-09 17:20:03,369 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:21:03] 2026-01-09 17:20:03,374 | INFO     | [payload] control thread has finished
[2026-01-09 12:21:03] 2026-01-09 17:20:03,469 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:21:03] 2026-01-09 17:20:03,486 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:21:03] 2026-01-09 17:20:03,515 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:21:03] 2026-01-09 17:20:03,522 | INFO     | [job] validate thread has finished
[2026-01-09 12:21:03] 2026-01-09 17:20:03,536 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:21:03] 2026-01-09 17:20:03,541 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:21:03] 2026-01-09 17:20:03,620 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:21:03] 2026-01-09 17:20:03,690 | INFO     | [job] control thread has finished
[2026-01-09 12:21:03] 2026-01-09 17:20:03,736 | INFO     | [data] control thread has finished
[2026-01-09 12:21:03] 2026-01-09 17:20:04,121 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:21:03] 2026-01-09 17:20:04,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:21:03] 2026-01-09 17:20:04,357 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:21:03] 2026-01-09 17:20:04,468 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:21:03] 2026-01-09 17:20:05,127 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:21:03] 2026-01-09 17:20:05,153 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:21:03] 2026-01-09 17:20:08,241 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:21:03] 2026-01-09 17:20:23,375 [wrapper] supervise_pilot (15 min periods counter: 49)
[2026-01-09 12:21:03] 2026-01-09 17:20:33,047 | INFO     | PID=338770 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 12:21:03] 2026-01-09 17:20:33,047 | INFO     | .. there are 17 such processes running
[2026-01-09 12:21:03] 2026-01-09 17:20:33,059 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:21:03] 2026-01-09 17:20:33,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:21:03] 2026-01-09 17:20:33,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:21:03] 2026-01-09 17:20:56,718 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:21:03] 2026-01-09 17:20:58,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816948909888)>', '<ExcThread(monitor, started 139816066864896)>']
[2026-01-09 12:21:03] 2026-01-09 17:20:58,213 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:21:03] 2026-01-09 17:20:58,214 | INFO     | [monitor] control thread has ended
[2026-01-09 12:21:03] 2026-01-09 17:21:03,208 | INFO     | all workflow threads have been joined
[2026-01-09 12:21:03] 2026-01-09 17:21:03,209 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:21:03] 2026-01-09 17:21:03,209 | INFO     | traces error code: 0
[2026-01-09 12:21:03] 2026-01-09 17:21:03,209 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:21:03] 2026-01-09 17:21:03,381 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:21:03] 2026-01-09 17:21:03,384 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:21:03] 2026-01-09 17:21:03,387 [wrapper] pilotpid: 338770
[2026-01-09 12:21:03] 2026-01-09 17:21:03,390 [wrapper] Pilot exit status: 0
[2026-01-09 12:21:03] 2026-01-09 17:21:03,414 [wrapper] pandaids: 6963155275
[2026-01-09 12:21:03] 2026-01-09 17:21:03,489 [wrapper] cleanup supervisor_pilot 2173398 338771
[2026-01-09 12:21:03] 2026-01-09 17:21:03,492 [wrapper] Test setup, not cleaning
[2026-01-09 12:21:03] 2026-01-09 17:21:03,494 [wrapper] apfmon messages muted
[2026-01-09 12:21:03] 2026-01-09 17:21:03,496 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:21:03] 2026-01-09 17:21:03,498 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:21:03]  *** Error codes and diagnostics ***
[2026-01-09 12:21:03]     "exeErrorCode": 0,
[2026-01-09 12:21:03]     "exeErrorDiag": "",
[2026-01-09 12:21:03]     "pilotErrorCode": 0,
[2026-01-09 12:21:03]     "pilotErrorDiag": "",
[2026-01-09 12:21:03]  *** Listing of results directory ***
[2026-01-09 12:21:03] total 445424
[2026-01-09 12:21:03] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-09 12:21:03] -rwx------. 1 boincer umatlas     36322 Jan  8 14:06 runpilot2-wrapper.sh
[2026-01-09 12:21:03] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 14:07 queuedata.json
[2026-01-09 12:21:03] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:21:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:18 run_atlas
[2026-01-09 12:21:03] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:18 job.xml
[2026-01-09 12:21:03] -rw-r--r--. 2 boincer umatlas 222464606 Jan  9 00:19 EVNT.47898824._001182.pool.root.1
[2026-01-09 12:21:03] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:19 start_atlas.sh
[2026-01-09 12:21:03] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:19 shared
[2026-01-09 12:21:03] -rw-r--r--. 2 boincer umatlas    592391 Jan  9 00:19 input.tar.gz
[2026-01-09 12:21:03] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:19 boinc_lockfile
[2026-01-09 12:21:03] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 00:19 pandaJob.out
[2026-01-09 12:21:03] -rw-------. 1 boincer umatlas        57 Jan  9 00:19 setup.sh.local
[2026-01-09 12:21:03] -rw-------. 1 boincer umatlas    989771 Jan  9 00:20 agis_schedconf.cvmfs.json
[2026-01-09 12:21:03] drwx------. 5 boincer umatlas      4096 Jan  9 00:20 pilot3
[2026-01-09 12:21:03] -rw-r--r--. 1 boincer umatlas      6875 Jan  9 12:10 init_data.xml
[2026-01-09 12:21:03] -rw-------. 1 boincer umatlas 217850988 Jan  9 12:18 HITS.47898826._030525.pool.root.1
[2026-01-09 12:21:03] -rw-r--r--. 1 boincer umatlas       531 Jan  9 12:18 boinc_task_state.xml
[2026-01-09 12:21:03] -rw-------. 1 boincer umatlas      1040 Jan  9 12:19 memory_monitor_summary.json
[2026-01-09 12:21:03] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:19 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:21:03] -rw-------. 1 boincer umatlas    795669 Jan  9 12:19 log.47898826._030525.job.log.tgz.1
[2026-01-09 12:21:03] -rw-------. 1 boincer umatlas      7822 Jan  9 12:19 heartbeat.json
[2026-01-09 12:21:03] -rw-------. 1 boincer umatlas        95 Jan  9 12:20 pilot_heartbeat.json
[2026-01-09 12:21:03] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:21 boinc_mmap_file
[2026-01-09 12:21:03] -rw-r--r--. 1 boincer umatlas        28 Jan  9 12:21 wrapper_checkpoint.txt
[2026-01-09 12:21:03] -rw-------. 1 boincer umatlas      4823 Jan  9 12:21 pilotlog.txt
[2026-01-09 12:21:03] -rw-------. 1 boincer umatlas   5147872 Jan  9 12:21 log.47898826._030525.job.log.1
[2026-01-09 12:21:03] -rw-------. 1 boincer umatlas       357 Jan  9 12:21 output.list
[2026-01-09 12:21:03] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:21 runtime_log
[2026-01-09 12:21:03] -rw-------. 1 boincer umatlas   5959680 Jan  9 12:21 result.tar.gz
[2026-01-09 12:21:03] -rw-r--r--. 1 boincer umatlas      9348 Jan  9 12:21 runtime_log.err
[2026-01-09 12:21:03] -rw-------. 1 boincer umatlas       659 Jan  9 12:21 BHlNDmJWAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFBlKDmioBUim.diag
[2026-01-09 12:21:03] -rw-r--r--. 1 boincer umatlas     21301 Jan  9 12:21 stderr.txt
[2026-01-09 12:21:03] HITS file was successfully produced:
[2026-01-09 12:21:03] -rw-------. 1 boincer umatlas 217850988 Jan  9 12:18 shared/HITS.pool.root.1
[2026-01-09 12:21:03]  *** Contents of shared directory: ***
[2026-01-09 12:21:03] total 436420
[2026-01-09 12:21:03] -rw-r--r--. 2 boincer umatlas 222464606 Jan  9 00:19 ATLAS.root_0
[2026-01-09 12:21:03] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:19 start_atlas.sh
[2026-01-09 12:21:03] -rw-r--r--. 2 boincer umatlas    592391 Jan  9 00:19 input.tar.gz
[2026-01-09 12:21:03] -rw-------. 1 boincer umatlas 217850988 Jan  9 12:18 HITS.pool.root.1
[2026-01-09 12:21:03] -rw-------. 1 boincer umatlas   5959680 Jan  9 12:21 result.tar.gz
12:21:05 (319553): run_atlas exited; CPU time 62894.343630
12:21:05 (319553): called boinc_finish(0)

</stderr_txt>
]]>

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