Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:19:10 (320404): wrapper (7.7.26015): starting
00:19:10 (320404): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:19:10] Arguments: --nthreads 8
[2026-01-09 00:19:10] Threads: 8
[2026-01-09 00:19:10] Checking for CVMFS
[2026-01-09 00:19:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:19:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:19:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:19:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:19:12] 2.13.3.0 13122 92982 358264 154933 0 68 23087060 32935937 18517 16776704 0 353602753 99.518 459814260 35975 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:19:12] CVMFS is ok
[2026-01-09 00:19:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:19:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:19:12] Further information can be found at the LHC@home message board.
[2026-01-09 00:19:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:19:12] Checking for apptainer binary...
[2026-01-09 00:19:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:19:12] Running /usr/bin/apptainer --version
[2026-01-09 00:19:12] apptainer version 1.4.5-2.el9
[2026-01-09 00:19:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:19:13] c6-8-25-2.aglt2.org
[2026-01-09 00:19:13] apptainer works
[2026-01-09 00:19:13] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:19:13] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:19:13] Starting ATLAS job with PandaID=6963154086
[2026-01-09 00:19:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:23:07]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:23:07] 2026-01-09 17:22:09,061 | INFO     | chi2: 0.558680663942083
[2026-01-09 12:23:07] 2026-01-09 17:22:09,061 | INFO     | current chi2=0.558680663942083 (change=63.58586319612045 %)
[2026-01-09 12:23:07] 2026-01-09 17:22:09,062 | INFO     | sum of square deviations: 102752464895.48549
[2026-01-09 12:23:07] 2026-01-09 17:22:09,073 | INFO     | sum of deviations: 248084369186.22845
[2026-01-09 12:23:07] 2026-01-09 17:22:09,073 | INFO     | mean x: 1767958189.783237
[2026-01-09 12:23:07] 2026-01-09 17:22:09,073 | INFO     | mean y: 2493601.174855491
[2026-01-09 12:23:07] 2026-01-09 17:22:09,073 | INFO     | intersect: -4266044313.7659183
[2026-01-09 12:23:07] 2026-01-09 17:22:09,074 | INFO     | chi2: 0.26291887636098593
[2026-01-09 12:23:07] 2026-01-09 17:22:09,074 | INFO     | current chi2=0.26291887636098593 (change=52.93932771794621 %)
[2026-01-09 12:23:07] 2026-01-09 17:22:09,075 | INFO     | sum of square deviations: 100541314140.34045
[2026-01-09 12:23:07] 2026-01-09 17:22:09,086 | INFO     | sum of deviations: 205149494616.78168
[2026-01-09 12:23:07] 2026-01-09 17:22:09,086 | INFO     | mean x: 1767958342.279476
[2026-01-09 12:23:07] 2026-01-09 17:22:09,086 | INFO     | mean y: 2496559.9490538575
[2026-01-09 12:23:07] 2026-01-09 17:22:09,086 | INFO     | intersect: -3604933515.1729927
[2026-01-09 12:23:07] 2026-01-09 17:22:09,087 | INFO     | chi2: 0.1475063097905097
[2026-01-09 12:23:07] 2026-01-09 17:22:09,087 | INFO     | current chi2=0.1475063097905097 (change=43.8966452952642 %)
[2026-01-09 12:23:07] 2026-01-09 17:22:09,088 | INFO     | sum of square deviations: 98362033293.56752
[2026-01-09 12:23:07] 2026-01-09 17:22:09,098 | INFO     | sum of deviations: 174552757322.53525
[2026-01-09 12:23:07] 2026-01-09 17:22:09,099 | INFO     | mean x: 1767958494.7785923
[2026-01-09 12:23:07] 2026-01-09 17:22:09,099 | INFO     | mean y: 2498701.0366568915
[2026-01-09 12:23:07] 2026-01-09 17:22:09,099 | INFO     | intersect: -3134911331.6978297
[2026-01-09 12:23:07] 2026-01-09 17:22:09,100 | INFO     | chi2: 0.09386519795142695
[2026-01-09 12:23:07] 2026-01-09 17:22:09,100 | INFO     | current chi2=0.09386519795142695 (change=36.3652998405726 %)
[2026-01-09 12:23:07] 2026-01-09 17:22:09,101 | INFO     | sum of square deviations: 96214599262.44594
[2026-01-09 12:23:07] 2026-01-09 17:22:09,111 | INFO     | sum of deviations: 144192661026.7268
[2026-01-09 12:23:07] 2026-01-09 17:22:09,111 | INFO     | mean x: 1767958647.2732644
[2026-01-09 12:23:07] 2026-01-09 17:22:09,111 | INFO     | mean y: 2500857.001477105
[2026-01-09 12:23:07] 2026-01-09 17:22:09,111 | INFO     | intersect: -2647062347.4367304
[2026-01-09 12:23:07] 2026-01-09 17:22:09,112 | INFO     | chi2: 0.03837039753387146
[2026-01-09 12:23:07] 2026-01-09 17:22:09,112 | INFO     | current chi2=0.03837039753387146 (change=59.12180619517018 %)
[2026-01-09 12:23:07] 2026-01-09 17:22:09,113 | INFO     | sum of square deviations: 94098571600.7083
[2026-01-09 12:23:07] 2026-01-09 17:22:09,123 | INFO     | sum of deviations: 125669713687.87485
[2026-01-09 12:23:07] 2026-01-09 17:22:09,123 | INFO     | mean x: 1767958799.7708333
[2026-01-09 12:23:07] 2026-01-09 17:22:09,123 | INFO     | mean y: 2502188.401785714
[2026-01-09 12:23:07] 2026-01-09 17:22:09,123 | INFO     | intersect: -2358626916.957419
[2026-01-09 12:23:07] 2026-01-09 17:22:09,124 | INFO     | chi2: 0.007018237070267815
[2026-01-09 12:23:07] 2026-01-09 17:22:09,124 | INFO     | current chi2=0.007018237070267815 (change=81.70924066118297 %)
[2026-01-09 12:23:07] 2026-01-09 17:22:09,125 | INFO     | sum of square deviations: 92013922947.55943
[2026-01-09 12:23:07] 2026-01-09 17:22:09,135 | INFO     | sum of deviations: 124416718576.1245
[2026-01-09 12:23:07] 2026-01-09 17:22:09,135 | INFO     | mean x: 1767958952.263868
[2026-01-09 12:23:07] 2026-01-09 17:22:09,135 | INFO     | mean y: 2502279.95952024
[2026-01-09 12:23:07] 2026-01-09 17:22:09,136 | INFO     | intersect: -2388045197.7663803
[2026-01-09 12:23:07] 2026-01-09 17:22:09,137 | INFO     | chi2: 0.006822625469994791
[2026-01-09 12:23:07] 2026-01-09 17:22:09,137 | INFO     | current chi2=0.006822625469994791 (change=2.7871899782598755 %)
[2026-01-09 12:23:07] 2026-01-09 17:22:09,137 | INFO     | left removable region: 80
[2026-01-09 12:23:07] 2026-01-09 17:22:09,138 | INFO     | sum of square deviations: 74259470336.29134
[2026-01-09 12:23:07] 2026-01-09 17:22:09,146 | INFO     | sum of deviations: 98579397008.97585
[2026-01-09 12:23:07] 2026-01-09 17:22:09,146 | INFO     | mean x: 1767959989.2560387
[2026-01-09 12:23:07] 2026-01-09 17:22:09,146 | INFO     | mean y: 2504006.6731078904
[2026-01-09 12:23:07] 2026-01-09 17:22:09,147 | INFO     | intersect: -2344461691.945418
[2026-01-09 12:23:07] 2026-01-09 17:22:09,147 | INFO     | chi2: 0.002534922375739675
[2026-01-09 12:23:07] 2026-01-09 17:22:09,148 | INFO     | current memory leak: 1.33 B/s (using 621 data points, chi2=0.00)
[2026-01-09 12:23:07] 2026-01-09 17:22:09,148 | INFO     | could have reported an average CPU frequency of 2653 MHz (27 samples)
[2026-01-09 12:23:07] 2026-01-09 17:22:09,149 | INFO     | ..............................
[2026-01-09 12:23:07] 2026-01-09 17:22:09,149 | INFO     | . Timing measurements:
[2026-01-09 12:23:07] 2026-01-09 17:22:09,149 | INFO     | . get job = 0 s
[2026-01-09 12:23:07] 2026-01-09 17:22:09,149 | INFO     | . initial setup = 14 s
[2026-01-09 12:23:07] 2026-01-09 17:22:09,149 | INFO     | . payload setup = 49 s
[2026-01-09 12:23:07] 2026-01-09 17:22:09,149 | INFO     | . stage-in = 0 s
[2026-01-09 12:23:07] 2026-01-09 17:22:09,149 | INFO     | . payload execution = 43150 s
[2026-01-09 12:23:07] 2026-01-09 17:22:09,149 | INFO     | . stage-out = 2 s
[2026-01-09 12:23:07] 2026-01-09 17:22:09,149 | INFO     | . log creation = 0 s
[2026-01-09 12:23:07] 2026-01-09 17:22:09,149 | INFO     | ..............................
[2026-01-09 12:23:07] 2026-01-09 17:22:09,247 | INFO     | 
[2026-01-09 12:23:07] 2026-01-09 17:22:09,247 | INFO     | job summary report
[2026-01-09 12:23:07] 2026-01-09 17:22:09,247 | INFO     | --------------------------------------------------
[2026-01-09 12:23:07] 2026-01-09 17:22:09,247 | INFO     | PanDA job id: 6963154086
[2026-01-09 12:23:07] 2026-01-09 17:22:09,247 | INFO     | task id: 47898826
[2026-01-09 12:23:07] 2026-01-09 17:22:09,247 | INFO     | errors: (none)
[2026-01-09 12:23:07] 2026-01-09 17:22:09,247 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:23:07] 2026-01-09 17:22:09,248 | INFO     | pilot state: finished 
[2026-01-09 12:23:07] 2026-01-09 17:22:09,248 | INFO     | transexitcode: 0
[2026-01-09 12:23:07] 2026-01-09 17:22:09,248 | INFO     | exeerrorcode: 0
[2026-01-09 12:23:07] 2026-01-09 17:22:09,248 | INFO     | exeerrordiag: 
[2026-01-09 12:23:07] 2026-01-09 17:22:09,248 | INFO     | exitcode: 0
[2026-01-09 12:23:07] 2026-01-09 17:22:09,248 | INFO     | exitmsg: OK
[2026-01-09 12:23:07] 2026-01-09 17:22:09,248 | INFO     | cpuconsumptiontime: 63335 s
[2026-01-09 12:23:07] 2026-01-09 17:22:09,248 | INFO     | nevents: 400
[2026-01-09 12:23:07] 2026-01-09 17:22:09,248 | INFO     | neventsw: 0
[2026-01-09 12:23:07] 2026-01-09 17:22:09,248 | INFO     | pid: 376088
[2026-01-09 12:23:07] 2026-01-09 17:22:09,248 | INFO     | pgrp: 376088
[2026-01-09 12:23:07] 2026-01-09 17:22:09,248 | INFO     | corecount: 8
[2026-01-09 12:23:07] 2026-01-09 17:22:09,248 | INFO     | event service: False
[2026-01-09 12:23:07] 2026-01-09 17:22:09,248 | INFO     | sizes: {0: 2283143, 1: 2283744, 2: 2283828, 3: 2283884, 4: 2283884, 5: 2284055, 6: 2284239, 17: 2284267, 29: 2284295, 36: 2284585, 40: 2284613, 43204: 2328128, 432
[2026-01-09 12:23:07] 2026-01-09 17:22:09,249 | INFO     | --------------------------------------------------
[2026-01-09 12:23:07] 2026-01-09 17:22:09,249 | INFO     | 
[2026-01-09 12:23:07] 2026-01-09 17:22:09,249 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-09 12:23:07] 2026-01-09 17:22:09,268 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,268 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,268 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,268 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,269 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,269 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,269 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,269 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,269 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,269 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,269 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,269 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,269 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,269 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,269 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:23:07] 2026-01-09 17:22:09,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,270 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:23:07] 2026-01-09 17:22:09,270 | INFO     | job 6963154086 has completed (purged errors)
[2026-01-09 12:23:07] 2026-01-09 17:22:09,270 | INFO     | overall cleanup function is called
[2026-01-09 12:23:07] 2026-01-09 17:22:10,276 | INFO     | --- collectZombieJob: --- 10, [376088]
[2026-01-09 12:23:07] 2026-01-09 17:22:10,277 | INFO     | zombie collector waiting for pid 376088
[2026-01-09 12:23:07] 2026-01-09 17:22:10,277 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:23:07] 2026-01-09 17:22:10,277 | INFO     | collected zombie processes
[2026-01-09 12:23:07] 2026-01-09 17:22:10,277 | INFO     | will attempt to kill all subprocesses of pid=376088
[2026-01-09 12:23:07] 2026-01-09 17:22:10,616 | INFO     | process IDs to be killed: [376088] (in reverse order)
[2026-01-09 12:23:07] 2026-01-09 17:22:10,734 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:23:07] 2026-01-09 17:22:10,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:23:07] 2026-01-09 17:22:10,751 | INFO     | did not find any defunct processes belonging to 376088
[2026-01-09 12:23:07] 2026-01-09 17:22:10,767 | INFO     | did not find any defunct processes belonging to 376088
[2026-01-09 12:23:07] 2026-01-09 17:22:10,768 | INFO     | ready for new job
[2026-01-09 12:23:07] 2026-01-09 17:22:10,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:23:07] 2026-01-09 17:22:10,771 | INFO     | ***************************************
[2026-01-09 12:23:07] 2026-01-09 17:22:10,771 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:23:07] 2026-01-09 17:22:10,771 | INFO     | ***************************************
[2026-01-09 12:23:07] 2026-01-09 17:22:10,772 | INFO     | 
[2026-01-09 12:23:07] 2026-01-09 17:22:10,777 | INFO     | architecture information:
[2026-01-09 12:23:07] 2026-01-09 17:22:10,778 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:23:07] 2026-01-09 17:22:10,798 | INFO     | cat /etc/os-release:
[2026-01-09 12:23:07] NAME="CentOS Linux"
[2026-01-09 12:23:07] VERSION="7 (Core)"
[2026-01-09 12:23:07] ID="centos"
[2026-01-09 12:23:07] ID_LIKE="rhel fedora"
[2026-01-09 12:23:07] VERSION_ID="7"
[2026-01-09 12:23:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:23:07] ANSI_COLOR="0;31"
[2026-01-09 12:23:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:23:07] HOME_URL="https://www.centos.org/"
[2026-01-09 12:23:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:23:07] 
[2026-01-09 12:23:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:23:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:23:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:23:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:23:07] 
[2026-01-09 12:23:07] 2026-01-09 17:22:10,798 | INFO     | ***************************************
[2026-01-09 12:23:07] 2026-01-09 17:22:11,301 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-09 12:23:07] 2026-01-09 17:22:11,322 | INFO     | sufficient remaining disk space (73402417152 B)
[2026-01-09 12:23:07] 2026-01-09 17:22:11,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:23:07] 2026-01-09 17:22:11,322 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:23:07] 2026-01-09 17:22:11,323 | INFO     | update_server=False
[2026-01-09 12:23:07] 2026-01-09 17:22:11,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:23:07] 2026-01-09 17:22:11,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:23:07] 2026-01-09 17:22:11,416 | INFO     | all payload control threads have been joined
[2026-01-09 12:23:07] 2026-01-09 17:22:11,546 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 12:23:07] 2026-01-09 17:22:11,546 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 12:23:07] 2026-01-09 17:22:11,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:23:07] 2026-01-09 17:22:11,546 | INFO     | will abort loop
[2026-01-09 12:23:07] 2026-01-09 17:22:11,627 | INFO     | all data control threads have been joined
[2026-01-09 12:23:07] 2026-01-09 17:22:11,682 | INFO     | all job control threads have been joined
[2026-01-09 12:23:07] 2026-01-09 17:22:12,328 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:23:07] 2026-01-09 17:22:12,422 | INFO     | [payload] control thread has finished
[2026-01-09 12:23:07] 2026-01-09 17:22:12,552 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:23:07] 2026-01-09 17:22:12,583 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:23:07] 2026-01-09 17:22:12,632 | INFO     | [data] control thread has finished
[2026-01-09 12:23:07] 2026-01-09 17:22:12,686 | INFO     | [job] control thread has finished
[2026-01-09 12:23:07] 2026-01-09 17:22:12,756 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:23:07] 2026-01-09 17:22:12,885 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:23:07] 2026-01-09 17:22:12,945 | INFO     | [job] validate thread has finished
[2026-01-09 12:23:07] 2026-01-09 17:22:13,145 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:23:07] 2026-01-09 17:22:13,236 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:23:07] 2026-01-09 17:22:13,328 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:23:07] 2026-01-09 17:22:13,336 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:23:07] 2026-01-09 17:22:13,365 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:23:07] 2026-01-09 17:22:13,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:23:07] 2026-01-09 17:22:14,257 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:23:07] 2026-01-09 17:22:15,263 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:23:07] 2026-01-09 17:22:17,415 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:23:07] 2026-01-09 17:22:42,151 | INFO     | PID=339911 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 12:23:07] 2026-01-09 17:22:42,151 | INFO     | .. there are 16 such processes running
[2026-01-09 12:23:07] 2026-01-09 17:22:42,151 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:23:07] 2026-01-09 17:22:42,152 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:23:07] 2026-01-09 17:22:42,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:23:07] 2026-01-09 17:23:00,802 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:23:07] 2026-01-09 17:23:02,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140379916060480)>', '<ExcThread(monitor, started 140379059910400)>']
[2026-01-09 12:23:07] 2026-01-09 17:23:03,277 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:23:07] 2026-01-09 17:23:03,278 | INFO     | [monitor] control thread has ended
[2026-01-09 12:23:07] 2026-01-09 17:23:07,379 | INFO     | all workflow threads have been joined
[2026-01-09 12:23:07] 2026-01-09 17:23:07,380 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:23:07] 2026-01-09 17:23:07,380 | INFO     | traces error code: 0
[2026-01-09 12:23:07] 2026-01-09 17:23:07,380 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:23:07] 2026-01-09 17:23:07,522 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:23:07] 2026-01-09 17:23:07,525 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:23:07] 2026-01-09 17:23:07,528 [wrapper] pilotpid: 339911
[2026-01-09 12:23:07] 2026-01-09 17:23:07,531 [wrapper] Pilot exit status: 0
[2026-01-09 12:23:07] 2026-01-09 17:23:07,540 [wrapper] pandaids: 6963154086
[2026-01-09 12:23:07] 2026-01-09 17:23:07,618 [wrapper] cleanup supervisor_pilot 2173955 339912
[2026-01-09 12:23:07] 2026-01-09 17:23:07,623 [wrapper] Test setup, not cleaning
[2026-01-09 12:23:07] 2026-01-09 17:23:07,626 [wrapper] apfmon messages muted
[2026-01-09 12:23:07] 2026-01-09 17:23:07,628 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:23:07] 2026-01-09 17:23:07,631 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:23:07]  *** Error codes and diagnostics ***
[2026-01-09 12:23:07]     "exeErrorCode": 0,
[2026-01-09 12:23:07]     "exeErrorDiag": "",
[2026-01-09 12:23:07]     "pilotErrorCode": 0,
[2026-01-09 12:23:07]     "pilotErrorDiag": "",
[2026-01-09 12:23:07]  *** Listing of results directory ***
[2026-01-09 12:23:07] total 454636
[2026-01-09 12:23:07] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-09 12:23:07] -rwx------. 1 boincer umatlas     36322 Jan  8 14:06 runpilot2-wrapper.sh
[2026-01-09 12:23:07] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 14:07 queuedata.json
[2026-01-09 12:23:07] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:23:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:19 run_atlas
[2026-01-09 12:23:07] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:19 job.xml
[2026-01-09 12:23:07] -rw-r--r--. 2 boincer umatlas 224015239 Jan  9 00:19 EVNT.47898824._001181.pool.root.1
[2026-01-09 12:23:07] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:19 start_atlas.sh
[2026-01-09 12:23:07] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:19 shared
[2026-01-09 12:23:07] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 00:19 input.tar.gz
[2026-01-09 12:23:07] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:19 boinc_lockfile
[2026-01-09 12:23:07] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 00:19 pandaJob.out
[2026-01-09 12:23:07] -rw-------. 1 boincer umatlas        57 Jan  9 00:19 setup.sh.local
[2026-01-09 12:23:07] -rw-------. 1 boincer umatlas    989771 Jan  9 00:20 agis_schedconf.cvmfs.json
[2026-01-09 12:23:07] drwx------. 5 boincer umatlas      4096 Jan  9 00:20 pilot3
[2026-01-09 12:23:07] -rw-r--r--. 1 boincer umatlas       531 Jan  9 12:21 boinc_task_state.xml
[2026-01-09 12:23:07] -rw-------. 1 boincer umatlas 225619869 Jan  9 12:21 HITS.47898826._030502.pool.root.1
[2026-01-09 12:23:07] -rw-------. 1 boincer umatlas      1039 Jan  9 12:21 memory_monitor_summary.json
[2026-01-09 12:23:07] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:21 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:23:07] -rw-------. 1 boincer umatlas        95 Jan  9 12:21 pilot_heartbeat.json
[2026-01-09 12:23:07] -rw-------. 1 boincer umatlas    806870 Jan  9 12:21 log.47898826._030502.job.log.tgz.1
[2026-01-09 12:23:07] -rw-------. 1 boincer umatlas      7825 Jan  9 12:22 heartbeat.json
[2026-01-09 12:23:07] -rw-r--r--. 1 boincer umatlas      6875 Jan  9 12:22 init_data.xml
[2026-01-09 12:23:07] -rw-r--r--. 1 boincer umatlas        28 Jan  9 12:23 wrapper_checkpoint.txt
[2026-01-09 12:23:07] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:23 boinc_mmap_file
[2026-01-09 12:23:07] -rw-------. 1 boincer umatlas      5009 Jan  9 12:23 pilotlog.txt
[2026-01-09 12:23:07] -rw-------. 1 boincer umatlas   5192407 Jan  9 12:23 log.47898826._030502.job.log.1
[2026-01-09 12:23:07] -rw-------. 1 boincer umatlas       357 Jan  9 12:23 output.list
[2026-01-09 12:23:07] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:23 runtime_log
[2026-01-09 12:23:07] -rw-------. 1 boincer umatlas   6021120 Jan  9 12:23 result.tar.gz
[2026-01-09 12:23:07] -rw-r--r--. 1 boincer umatlas      9348 Jan  9 12:23 runtime_log.err
[2026-01-09 12:23:07] -rw-------. 1 boincer umatlas       658 Jan  9 12:23 akLMDm9VAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmyxfKDmnQEfDn.diag
[2026-01-09 12:23:07] -rw-r--r--. 1 boincer umatlas     21132 Jan  9 12:23 stderr.txt
[2026-01-09 12:23:07] HITS file was successfully produced:
[2026-01-09 12:23:07] -rw-------. 1 boincer umatlas 225619869 Jan  9 12:21 shared/HITS.pool.root.1
[2026-01-09 12:23:07]  *** Contents of shared directory: ***
[2026-01-09 12:23:07] total 445580
[2026-01-09 12:23:07] -rw-r--r--. 2 boincer umatlas 224015239 Jan  9 00:19 ATLAS.root_0
[2026-01-09 12:23:07] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:19 start_atlas.sh
[2026-01-09 12:23:07] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 00:19 input.tar.gz
[2026-01-09 12:23:07] -rw-------. 1 boincer umatlas 225619869 Jan  9 12:21 HITS.pool.root.1
[2026-01-09 12:23:07] -rw-------. 1 boincer umatlas   6021120 Jan  9 12:23 result.tar.gz
12:23:09 (320404): run_atlas exited; CPU time 65050.995278
12:23:09 (320404): called boinc_finish(0)

</stderr_txt>
]]>

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