Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:09:32 (293736): wrapper (7.7.26015): starting
14:09:32 (293736): wrapper: running run_atlas (--nthreads 2)
[2026-01-09 14:09:32] Arguments: --nthreads 2
[2026-01-09 14:09:32] Threads: 2
[2026-01-09 14:09:32] Checking for CVMFS
[2026-01-09 14:09:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:09:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:09:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:09:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:09:32] 2.9.2.0 4183069 1561 54924 154944 1 57 21668327 36864001 0 130560 0 746477 99.984 58877 4120 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 14:09:32] CVMFS is ok
[2026-01-09 14:09:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:09:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:09:32] Further information can be found at the LHC@home message board.
[2026-01-09 14:09:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:09:32] Checking for apptainer binary...
[2026-01-09 14:09:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:09:32] Running /usr/bin/apptainer --version
[2026-01-09 14:09:32] apptainer version 1.4.1-1.1
[2026-01-09 14:09:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:09:32] thA389
[2026-01-09 14:09:32] apptainer works
[2026-01-09 14:09:32] Set ATHENA_PROC_NUMBER=2
[2026-01-09 14:09:32] Set ATHENA_CORE_NUMBER=2
[2026-01-09 14:09:33] Starting ATLAS job with PandaID=6963153944
[2026-01-09 14:09:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:02:06]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:02:06] 2026-01-09 16:01:16,681 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:02:06] 2026-01-09 16:01:16,681 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:02:06] 2026-01-09 16:01:16,760 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:02:06] 2026-01-09 16:01:16,974 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:02:06] 2026-01-09 16:01:17,204 | INFO     | [payload] control thread has finished
[2026-01-09 17:02:06] 2026-01-09 16:01:17,231 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:02:06] 2026-01-09 16:01:17,535 | INFO     | [job] control thread has finished
[2026-01-09 17:02:06] 2026-01-09 16:01:17,604 | INFO     | [data] control thread has finished
[2026-01-09 17:02:06] 2026-01-09 16:01:17,743 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:02:06] 2026-01-09 16:01:17,762 | INFO     | [job] validate thread has finished
[2026-01-09 17:02:06] 2026-01-09 16:01:17,971 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:02:06] 2026-01-09 16:01:18,110 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:02:06] 2026-01-09 16:01:18,457 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:02:06] 2026-01-09 16:01:18,746 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:02:06] 2026-01-09 16:01:22,748 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:02:06] 2026-01-09 16:01:25,740 | INFO     | job.realtimelogging is not enabled
[2026-01-09 17:02:06] 2026-01-09 16:01:26,746 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:02:06] 2026-01-09 16:01:45,683 | INFO     | PID=297452 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 17:02:06] 2026-01-09 16:01:45,683 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:02:06] 2026-01-09 16:01:45,683 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:02:06] 2026-01-09 16:01:45,683 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:02:06] 2026-01-09 16:02:00,739 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:02:06] 2026-01-09 16:02:00,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140630451939136)>', '<ExcThread(monitor, started 140629954774784)>']
[2026-01-09 17:02:06] 2026-01-09 16:02:01,763 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:02:06] 2026-01-09 16:02:01,764 | INFO     | [monitor] control thread has ended
[2026-01-09 17:02:06] 2026-01-09 16:02:05,855 | INFO     | all workflow threads have been joined
[2026-01-09 17:02:06] 2026-01-09 16:02:05,856 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:02:06] 2026-01-09 16:02:05,857 | INFO     | traces error code: 0
[2026-01-09 17:02:06] 2026-01-09 16:02:05,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:02:06] 2026-01-09 16:02:05,899 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:02:06] 2026-01-09 16:02:05,902 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:02:06] 2026-01-09 16:02:05,904 [wrapper] pilotpid: 297452
[2026-01-09 17:02:06] 2026-01-09 16:02:05,906 [wrapper] Pilot exit status: 0
[2026-01-09 17:02:06] 2026-01-09 16:02:05,911 [wrapper] pandaids: 6963153944
[2026-01-09 17:02:06] 2026-01-09 16:02:05,924 [wrapper] cleanup supervisor_pilot  323477 297453
[2026-01-09 17:02:06] 2026-01-09 16:02:05,926 [wrapper] Test setup, not cleaning
[2026-01-09 17:02:06] 2026-01-09 16:02:05,928 [wrapper] apfmon messages muted
[2026-01-09 17:02:06] 2026-01-09 16:02:05,930 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:02:06] 2026-01-09 16:02:05,932 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:02:06]  *** Error codes and diagnostics ***
[2026-01-09 17:02:06]     "exeErrorCode": 0,
[2026-01-09 17:02:06]     "exeErrorDiag": "",
[2026-01-09 17:02:06]     "pilotErrorCode": 0,
[2026-01-09 17:02:06]     "pilotErrorDiag": "",
[2026-01-09 17:02:06]  *** Listing of results directory ***
[2026-01-09 17:02:06] total 438712
[2026-01-09 17:02:06] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 17:02:06] -rwx------ 1 boinc boinc     36322 Jan  8 20:06 runpilot2-wrapper.sh
[2026-01-09 17:02:06] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:06 queuedata.json
[2026-01-09 17:02:06] -rw-r--r-- 1 boinc boinc       100 Jan  9 14:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:02:06] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 14:09 run_atlas
[2026-01-09 17:02:06] -rw-r--r-- 1 boinc boinc       105 Jan  9 14:09 job.xml
[2026-01-09 17:02:06] -rw-r--r-- 2 boinc boinc 224313430 Jan  9 14:09 EVNT.47898824._001175.pool.root.1
[2026-01-09 17:02:06] -rw-r--r-- 2 boinc boinc    592389 Jan  9 14:09 input.tar.gz
[2026-01-09 17:02:06] -rw-r--r-- 2 boinc boinc     15847 Jan  9 14:09 start_atlas.sh
[2026-01-09 17:02:06] drwxrwx--x 2 boinc boinc      4096 Jan  9 14:09 shared
[2026-01-09 17:02:06] -rw-r--r-- 1 boinc boinc         0 Jan  9 14:09 boinc_setup_complete
[2026-01-09 17:02:06] -rw-r--r-- 1 boinc boinc      6281 Jan  9 14:09 init_data.xml
[2026-01-09 17:02:06] -rw-r--r-- 1 boinc boinc         0 Jan  9 14:09 boinc_lockfile
[2026-01-09 17:02:06] -rw-r--r-- 1 boinc boinc      2520 Jan  9 14:09 pandaJob.out
[2026-01-09 17:02:06] -rw------- 1 boinc boinc    989377 Jan  9 14:09 agis_schedconf.cvmfs.json
[2026-01-09 17:02:06] -rw------- 1 boinc boinc   1516240 Jan  9 14:09 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:02:06] drwx------ 5 boinc boinc      4096 Jan  9 14:09 pilot3
[2026-01-09 17:02:06] -rw------- 1 boinc boinc 217465138 Jan  9 17:00 HITS.47898826._030360.pool.root.1
[2026-01-09 17:02:06] -rw-r--r-- 1 boinc boinc       530 Jan  9 17:00 boinc_task_state.xml
[2026-01-09 17:02:06] -rw------- 1 boinc boinc      1018 Jan  9 17:00 memory_monitor_summary.json
[2026-01-09 17:02:06] -rw------- 1 boinc boinc    316625 Jan  9 17:01 log.47898826._030360.job.log.tgz.1
[2026-01-09 17:02:06] -rw------- 1 boinc boinc      7756 Jan  9 17:01 heartbeat.json
[2026-01-09 17:02:06] -rw------- 1 boinc boinc        95 Jan  9 17:01 pilot_heartbeat.json
[2026-01-09 17:02:06] -rw-r--r-- 1 boinc boinc        28 Jan  9 17:01 wrapper_checkpoint.txt
[2026-01-09 17:02:06] -rw------- 1 boinc boinc      4823 Jan  9 17:02 pilotlog.txt
[2026-01-09 17:02:06] -rw------- 1 boinc boinc   1462255 Jan  9 17:02 log.47898826._030360.job.log.1
[2026-01-09 17:02:06] -rw-r--r-- 1 boinc boinc      8192 Jan  9 17:02 boinc_mmap_file
[2026-01-09 17:02:06] -rw------- 1 boinc boinc       357 Jan  9 17:02 output.list
[2026-01-09 17:02:06] -rw-r--r-- 1 boinc boinc       620 Jan  9 17:02 runtime_log
[2026-01-09 17:02:06] -rw------- 1 boinc boinc   1802240 Jan  9 17:02 result.tar.gz
[2026-01-09 17:02:06] -rw-r--r-- 1 boinc boinc      8898 Jan  9 17:02 runtime_log.err
[2026-01-09 17:02:06] -rw------- 1 boinc boinc       661 Jan  9 17:02 LQ3LDm8VAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyAlKDm0oMTGo.diag
[2026-01-09 17:02:06] -rw-r--r-- 1 boinc boinc      6426 Jan  9 17:02 stderr.txt
[2026-01-09 17:02:06] HITS file was successfully produced:
[2026-01-09 17:02:06] -rw------- 1 boinc boinc 217465138 Jan  9 17:00 shared/HITS.pool.root.1
[2026-01-09 17:02:06]  *** Contents of shared directory: ***
[2026-01-09 17:02:06] total 433796
[2026-01-09 17:02:06] -rw-r--r-- 2 boinc boinc 224313430 Jan  9 14:09 ATLAS.root_0
[2026-01-09 17:02:06] -rw-r--r-- 2 boinc boinc    592389 Jan  9 14:09 input.tar.gz
[2026-01-09 17:02:06] -rw-r--r-- 2 boinc boinc     15847 Jan  9 14:09 start_atlas.sh
[2026-01-09 17:02:06] -rw------- 1 boinc boinc 217465138 Jan  9 17:00 HITS.pool.root.1
[2026-01-09 17:02:06] -rw------- 1 boinc boinc   1802240 Jan  9 17:02 result.tar.gz
17:02:27 (293736): run_atlas exited; CPU time 20189.579789
17:02:27 (293736): called boinc_finish(0)

</stderr_txt>
]]>

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