Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:18:43 (486896): wrapper (7.7.26015): starting
00:18:43 (486896): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:18:43] Arguments: --nthreads 12
[2026-01-09 00:18:43] Threads: 12
[2026-01-09 00:18:43] Checking for CVMFS
[2026-01-09 00:18:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:18:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:18:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:18:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:18:45] 2.13.3.0 11379 92980 334928 154933 0 110 21654538 32935937 17005 16776704 0 325028742 99.392 526042007 39710 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:18:45] CVMFS is ok
[2026-01-09 00:18:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:18:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:18:45] Further information can be found at the LHC@home message board.
[2026-01-09 00:18:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:18:45] Checking for apptainer binary...
[2026-01-09 00:18:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:18:45] Running /usr/bin/apptainer --version
[2026-01-09 00:18:45] apptainer version 1.4.5-2.el9
[2026-01-09 00:18:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:18:46] c6-4-5-1.aglt2.org
[2026-01-09 00:18:46] apptainer works
[2026-01-09 00:18:46] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:18:46] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:18:46] Starting ATLAS job with PandaID=6963153956
[2026-01-09 00:18:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 07:12:15]  *** The last 200 lines of the pilot log: ***
[2026-01-09 07:12:15] 2026-01-09 12:11:30,300 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 07:12:15] 2026-01-09 12:11:30,334 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2978.740421875
[2026-01-09 07:12:15] 2026-01-09 12:11:30,411 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963153956/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 07:12:15] 2026-01-09 12:11:30,437 | INFO     | extracted standard info from prmon json
[2026-01-09 07:12:15] 2026-01-09 12:11:30,437 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 07:12:15] 2026-01-09 12:11:30,437 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 07:12:15] 2026-01-09 12:11:30,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 07:12:15] 2026-01-09 12:11:30,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 07:12:15] 2026-01-09 12:11:30,472 | INFO     | fitting pss+swap vs Time
[2026-01-09 07:12:15] 2026-01-09 12:11:30,501 | INFO     | sum of square deviations: 20447564857.67321
[2026-01-09 07:12:15] 2026-01-09 12:11:30,533 | INFO     | sum of deviations: -6915476017.391109
[2026-01-09 07:12:15] 2026-01-09 12:11:30,533 | INFO     | mean x: 1767948324.8564355
[2026-01-09 07:12:15] 2026-01-09 12:11:30,533 | INFO     | mean y: 2679275.631188119
[2026-01-09 07:12:15] 2026-01-09 12:11:30,533 | INFO     | intersect: 600608873.880802
[2026-01-09 07:12:15] 2026-01-09 12:11:30,534 | INFO     | chi2: 2.517903720404872
[2026-01-09 07:12:15] 2026-01-09 12:11:30,534 | INFO     | sum of square deviations: 19697858078.57641
[2026-01-09 07:12:15] 2026-01-09 12:11:30,570 | INFO     | sum of deviations: 22704006716.127804
[2026-01-09 07:12:15] 2026-01-09 12:11:30,570 | INFO     | mean x: 1767948172.3659148
[2026-01-09 07:12:15] 2026-01-09 12:11:30,570 | INFO     | mean y: 2685239.7593984962
[2026-01-09 07:12:15] 2026-01-09 12:11:30,570 | INFO     | intersect: -2035074755.2127323
[2026-01-09 07:12:15] 2026-01-09 12:11:30,571 | INFO     | chi2: 1.6907636013546048
[2026-01-09 07:12:15] 2026-01-09 12:11:30,571 | INFO     | current chi2=1.6907636013546048 (change=32.85034738807509 %)
[2026-01-09 07:12:15] 2026-01-09 12:11:30,571 | INFO     | sum of square deviations: 18966758461.393578
[2026-01-09 07:12:15] 2026-01-09 12:11:30,613 | INFO     | sum of deviations: 22090233855.713192
[2026-01-09 07:12:15] 2026-01-09 12:11:30,613 | INFO     | mean x: 1767948019.8807106
[2026-01-09 07:12:15] 2026-01-09 12:11:30,613 | INFO     | mean y: 2685111.73857868
[2026-01-09 07:12:15] 2026-01-09 12:11:30,613 | INFO     | intersect: -2056411348.1759775
[2026-01-09 07:12:15] 2026-01-09 12:11:30,614 | INFO     | chi2: 1.6908708237804415
[2026-01-09 07:12:15] 2026-01-09 12:11:30,614 | INFO     | current chi2=1.6908708237804415 (change=-0.006341656855565896 %)
[2026-01-09 07:12:15] 2026-01-09 12:11:30,614 | INFO     | right removable region: 393
[2026-01-09 07:12:15] 2026-01-09 12:11:30,614 | INFO     | sum of square deviations: 19697597603.358345
[2026-01-09 07:12:15] 2026-01-09 12:11:30,672 | INFO     | sum of deviations: -78622718066.99248
[2026-01-09 07:12:15] 2026-01-09 12:11:30,672 | INFO     | mean x: 1767948477.3734336
[2026-01-09 07:12:15] 2026-01-09 12:11:30,672 | INFO     | mean y: 2693789.812030075
[2026-01-09 07:12:15] 2026-01-09 12:11:30,672 | INFO     | intersect: 7059438347.828644
[2026-01-09 07:12:15] 2026-01-09 12:11:30,672 | INFO     | chi2: 1.0439681048239688
[2026-01-09 07:12:15] 2026-01-09 12:11:30,673 | INFO     | current chi2=1.0439681048239688 (change=58.53820396849402 %)
[2026-01-09 07:12:15] 2026-01-09 12:11:30,673 | INFO     | sum of square deviations: 18966213299.086338
[2026-01-09 07:12:15] 2026-01-09 12:11:30,707 | INFO     | sum of deviations: -91060136664.41617
[2026-01-09 07:12:15] 2026-01-09 12:11:30,707 | INFO     | mean x: 1767948629.888325
[2026-01-09 07:12:15] 2026-01-09 12:11:30,708 | INFO     | mean y: 2696369.1269035535
[2026-01-09 07:12:15] 2026-01-09 12:11:30,708 | INFO     | intersect: 8490929698.288796
[2026-01-09 07:12:15] 2026-01-09 12:11:30,708 | INFO     | chi2: 0.981838638767407
[2026-01-09 07:12:15] 2026-01-09 12:11:30,708 | INFO     | current chi2=0.981838638767407 (change=5.951280098450709 %)
[2026-01-09 07:12:15] 2026-01-09 12:11:30,708 | INFO     | left removable region: 20
[2026-01-09 07:12:15] 2026-01-09 12:11:30,709 | INFO     | sum of square deviations: 16092489885.367235
[2026-01-09 07:12:15] 2026-01-09 12:11:30,727 | INFO     | sum of deviations: -47571103923.32974
[2026-01-09 07:12:15] 2026-01-09 12:11:30,727 | INFO     | mean x: 1767948599.4289544
[2026-01-09 07:12:15] 2026-01-09 12:11:30,727 | INFO     | mean y: 2699819.308310992
[2026-01-09 07:12:15] 2026-01-09 12:11:30,727 | INFO     | intersect: 5228943064.054076
[2026-01-09 07:12:15] 2026-01-09 12:11:30,728 | INFO     | chi2: 0.13235625249385263
[2026-01-09 07:12:15] 2026-01-09 12:11:30,728 | INFO     | current memory leak: -2.96 B/s (using 373 data points, chi2=0.13)
[2026-01-09 07:12:15] 2026-01-09 12:11:30,762 | INFO     | could have reported an average CPU frequency of 2970 MHz (17 samples)
[2026-01-09 07:12:15] 2026-01-09 12:11:30,762 | INFO     | ..............................
[2026-01-09 07:12:15] 2026-01-09 12:11:30,762 | INFO     | . Timing measurements:
[2026-01-09 07:12:15] 2026-01-09 12:11:30,762 | INFO     | . get job = 0 s
[2026-01-09 07:12:15] 2026-01-09 12:11:30,762 | INFO     | . initial setup = 4 s
[2026-01-09 07:12:15] 2026-01-09 12:11:30,762 | INFO     | . payload setup = 13 s
[2026-01-09 07:12:15] 2026-01-09 12:11:30,762 | INFO     | . stage-in = 0 s
[2026-01-09 07:12:15] 2026-01-09 12:11:30,762 | INFO     | . payload execution = 24637 s
[2026-01-09 07:12:15] 2026-01-09 12:11:30,762 | INFO     | . stage-out = 5 s
[2026-01-09 07:12:15] 2026-01-09 12:11:30,762 | INFO     | . log creation = 0 s
[2026-01-09 07:12:15] 2026-01-09 12:11:30,763 | INFO     | ..............................
[2026-01-09 07:12:15] 2026-01-09 12:11:31,388 | INFO     | 
[2026-01-09 07:12:15] 2026-01-09 12:11:31,389 | INFO     | job summary report
[2026-01-09 07:12:15] 2026-01-09 12:11:31,389 | INFO     | --------------------------------------------------
[2026-01-09 07:12:15] 2026-01-09 12:11:31,389 | INFO     | PanDA job id: 6963153956
[2026-01-09 07:12:15] 2026-01-09 12:11:31,389 | INFO     | task id: 47898826
[2026-01-09 07:12:15] 2026-01-09 12:11:31,389 | INFO     | errors: (none)
[2026-01-09 07:12:15] 2026-01-09 12:11:31,389 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 07:12:15] 2026-01-09 12:11:31,389 | INFO     | pilot state: finished 
[2026-01-09 07:12:15] 2026-01-09 12:11:31,389 | INFO     | transexitcode: 0
[2026-01-09 07:12:15] 2026-01-09 12:11:31,389 | INFO     | exeerrorcode: 0
[2026-01-09 07:12:15] 2026-01-09 12:11:31,389 | INFO     | exeerrordiag: 
[2026-01-09 07:12:15] 2026-01-09 12:11:31,389 | INFO     | exitcode: 0
[2026-01-09 07:12:15] 2026-01-09 12:11:31,389 | INFO     | exitmsg: OK
[2026-01-09 07:12:15] 2026-01-09 12:11:31,389 | INFO     | cpuconsumptiontime: 54888 s
[2026-01-09 07:12:15] 2026-01-09 12:11:31,389 | INFO     | nevents: 400
[2026-01-09 07:12:15] 2026-01-09 12:11:31,390 | INFO     | neventsw: 0
[2026-01-09 07:12:15] 2026-01-09 12:11:31,390 | INFO     | pid: 510554
[2026-01-09 07:12:15] 2026-01-09 12:11:31,390 | INFO     | pgrp: 510554
[2026-01-09 07:12:15] 2026-01-09 12:11:31,390 | INFO     | corecount: 12
[2026-01-09 07:12:15] 2026-01-09 12:11:31,390 | INFO     | event service: False
[2026-01-09 07:12:15] 2026-01-09 12:11:31,390 | INFO     | sizes: {0: 2283143, 1: 2283999, 13: 2283999, 16: 2284317, 24: 2284345, 24656: 2319683, 24662: 2328681, 24664: 2328737, 24688: 2328995}
[2026-01-09 07:12:15] 2026-01-09 12:11:31,390 | INFO     | --------------------------------------------------
[2026-01-09 07:12:15] 2026-01-09 12:11:31,390 | INFO     | 
[2026-01-09 07:12:15] 2026-01-09 12:11:31,390 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 07:12:15] 2026-01-09 12:11:31,563 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,563 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,563 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,563 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,563 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,571 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,571 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,571 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,571 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,571 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 07:12:15] 2026-01-09 12:11:31,571 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,571 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 07:12:15] 2026-01-09 12:11:31,572 | INFO     | job 6963153956 has completed (purged errors)
[2026-01-09 07:12:15] 2026-01-09 12:11:31,572 | INFO     | overall cleanup function is called
[2026-01-09 07:12:15] 2026-01-09 12:11:32,611 | INFO     | --- collectZombieJob: --- 10, [510554]
[2026-01-09 07:12:15] 2026-01-09 12:11:32,612 | INFO     | zombie collector waiting for pid 510554
[2026-01-09 07:12:15] 2026-01-09 12:11:32,612 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 07:12:15] 2026-01-09 12:11:32,612 | INFO     | collected zombie processes
[2026-01-09 07:12:15] 2026-01-09 12:11:32,612 | INFO     | will attempt to kill all subprocesses of pid=510554
[2026-01-09 07:12:15] 2026-01-09 12:11:34,267 | INFO     | process IDs to be killed: [510554] (in reverse order)
[2026-01-09 07:12:15] 2026-01-09 12:11:34,377 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 07:12:15] 2026-01-09 12:11:34,377 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 07:12:15] 2026-01-09 12:11:34,394 | INFO     | did not find any defunct processes belonging to 510554
[2026-01-09 07:12:15] 2026-01-09 12:11:34,409 | INFO     | did not find any defunct processes belonging to 510554
[2026-01-09 07:12:15] 2026-01-09 12:11:34,409 | INFO     | ready for new job
[2026-01-09 07:12:15] 2026-01-09 12:11:34,410 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 07:12:15] 2026-01-09 12:11:34,412 | INFO     | ***************************************
[2026-01-09 07:12:15] 2026-01-09 12:11:34,413 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 07:12:15] 2026-01-09 12:11:34,413 | INFO     | ***************************************
[2026-01-09 07:12:15] 2026-01-09 12:11:34,413 | INFO     | 
[2026-01-09 07:12:15] 2026-01-09 12:11:34,416 | INFO     | architecture information:
[2026-01-09 07:12:15] 2026-01-09 12:11:34,419 | INFO     | executing command: cat /etc/os-release
[2026-01-09 07:12:15] 2026-01-09 12:11:34,443 | INFO     | cat /etc/os-release:
[2026-01-09 07:12:15] NAME="CentOS Linux"
[2026-01-09 07:12:15] VERSION="7 (Core)"
[2026-01-09 07:12:15] ID="centos"
[2026-01-09 07:12:15] ID_LIKE="rhel fedora"
[2026-01-09 07:12:15] VERSION_ID="7"
[2026-01-09 07:12:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 07:12:15] ANSI_COLOR="0;31"
[2026-01-09 07:12:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 07:12:15] HOME_URL="https://www.centos.org/"
[2026-01-09 07:12:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 07:12:15] 
[2026-01-09 07:12:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 07:12:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 07:12:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 07:12:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 07:12:15] 
[2026-01-09 07:12:15] 2026-01-09 12:11:34,443 | INFO     | ***************************************
[2026-01-09 07:12:15] 2026-01-09 12:11:34,947 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 07:12:15] 2026-01-09 12:11:35,044 | INFO     | sufficient remaining disk space (74492936192 B)
[2026-01-09 07:12:15] 2026-01-09 12:11:35,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 07:12:15] 2026-01-09 12:11:35,044 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 07:12:15] 2026-01-09 12:11:35,045 | INFO     | update_server=False
[2026-01-09 07:12:15] 2026-01-09 12:11:35,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 07:12:15] 2026-01-09 12:11:35,076 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 07:12:15] 2026-01-09 12:11:35,077 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 07:12:15] 2026-01-09 12:11:35,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:12:15] 2026-01-09 12:11:35,077 | INFO     | will abort loop
[2026-01-09 07:12:15] 2026-01-09 12:11:35,525 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 07:12:15] 2026-01-09 12:11:35,589 | INFO     | all job control threads have been joined
[2026-01-09 07:12:15] 2026-01-09 12:11:35,802 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 07:12:15] 2026-01-09 12:11:35,828 | INFO     | all payload control threads have been joined
[2026-01-09 07:12:15] 2026-01-09 12:11:35,947 | INFO     | all data control threads have been joined
[2026-01-09 07:12:15] 2026-01-09 12:11:36,050 | INFO     | [job] retrieve thread has finished
[2026-01-09 07:12:15] 2026-01-09 12:11:36,082 | INFO     | [job] job monitor thread has finished
[2026-01-09 07:12:15] 2026-01-09 12:11:36,135 | INFO     | [payload] validate_post thread has finished
[2026-01-09 07:12:15] 2026-01-09 12:11:36,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:12:15] 2026-01-09 12:11:36,595 | INFO     | [job] control thread has finished
[2026-01-09 07:12:15] 2026-01-09 12:11:36,661 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 07:12:15] 2026-01-09 12:11:36,768 | INFO     | [payload] failed_post thread has finished
[2026-01-09 07:12:15] 2026-01-09 12:11:36,834 | INFO     | [payload] control thread has finished
[2026-01-09 07:12:15] 2026-01-09 12:11:36,953 | INFO     | [data] control thread has finished
[2026-01-09 07:12:15] 2026-01-09 12:11:37,019 | INFO     | [job] validate thread has finished
[2026-01-09 07:12:15] 2026-01-09 12:11:37,102 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 07:12:15] 2026-01-09 12:11:37,164 | INFO     | [job] queue monitor thread has finished
[2026-01-09 07:12:15] 2026-01-09 12:11:37,286 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 07:12:15] 2026-01-09 12:11:37,430 | INFO     | [data] copytool_in thread has finished
[2026-01-09 07:12:15] 2026-01-09 12:11:37,507 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 07:12:15] 2026-01-09 12:11:37,532 | INFO     | [data] copytool_out thread has finished
[2026-01-09 07:12:15] 2026-01-09 12:11:39,823 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 07:12:15] 2026-01-09 12:12:03,875 | INFO     | PID=494885 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 07:12:15] 2026-01-09 12:12:03,875 | INFO     | .. there are 16 such processes running
[2026-01-09 07:12:15] 2026-01-09 12:12:03,876 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 07:12:15] 2026-01-09 12:12:03,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 07:12:15] 2026-01-09 12:12:03,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 07:12:15] 2026-01-09 12:12:07,238 | INFO     | [monitor] cgroup control has ended
[2026-01-09 07:12:15] 2026-01-09 12:12:09,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140052655941440)>', '<ExcThread(monitor, started 140052155848448)>']
[2026-01-09 07:12:15] 2026-01-09 12:12:09,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 07:12:15] 2026-01-09 12:12:09,911 | INFO     | [monitor] control thread has ended
[2026-01-09 07:12:15] 2026-01-09 12:12:14,155 | INFO     | all workflow threads have been joined
[2026-01-09 07:12:15] 2026-01-09 12:12:14,156 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 07:12:15] 2026-01-09 12:12:14,156 | INFO     | traces error code: 0
[2026-01-09 07:12:15] 2026-01-09 12:12:14,156 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 07:12:15] 2026-01-09 12:12:14,802 [wrapper] ==== pilot stdout END ====
[2026-01-09 07:12:15] 2026-01-09 12:12:14,856 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 07:12:15] 2026-01-09 12:12:14,888 [wrapper] pilotpid: 494885
[2026-01-09 07:12:15] 2026-01-09 12:12:14,911 [wrapper] Pilot exit status: 0
[2026-01-09 07:12:15] 2026-01-09 12:12:15,092 [wrapper] pandaids: 6963153956
[2026-01-09 07:12:15] 2026-01-09 12:12:15,190 [wrapper] cleanup supervisor_pilot 1942974 494886
[2026-01-09 07:12:15] 2026-01-09 12:12:15,214 [wrapper] Test setup, not cleaning
[2026-01-09 07:12:15] 2026-01-09 12:12:15,228 [wrapper] apfmon messages muted
[2026-01-09 07:12:15] 2026-01-09 12:12:15,237 [wrapper] ==== wrapper stdout END ====
[2026-01-09 07:12:15] 2026-01-09 12:12:15,251 [wrapper] ==== wrapper stderr END ====
[2026-01-09 07:12:15]  *** Error codes and diagnostics ***
[2026-01-09 07:12:15]     "exeErrorCode": 0,
[2026-01-09 07:12:15]     "exeErrorDiag": "",
[2026-01-09 07:12:15]     "pilotErrorCode": 0,
[2026-01-09 07:12:15]     "pilotErrorDiag": "",
[2026-01-09 07:12:15]  *** Listing of results directory ***
[2026-01-09 07:12:15] total 447868
[2026-01-09 07:12:15] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-09 07:12:15] -rwx------. 1 boincer umatlas     36322 Jan  8 14:06 runpilot2-wrapper.sh
[2026-01-09 07:12:15] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 14:06 queuedata.json
[2026-01-09 07:12:15] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 07:12:15] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:18 run_atlas
[2026-01-09 07:12:15] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:18 job.xml
[2026-01-09 07:12:15] -rw-r--r--. 2 boincer umatlas 224313430 Jan  9 00:18 EVNT.47898824._001175.pool.root.1
[2026-01-09 07:12:15] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:18 start_atlas.sh
[2026-01-09 07:12:15] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:18 shared
[2026-01-09 07:12:15] -rw-r--r--. 2 boincer umatlas    592388 Jan  9 00:18 input.tar.gz
[2026-01-09 07:12:15] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:18 boinc_lockfile
[2026-01-09 07:12:15] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 00:18 pandaJob.out
[2026-01-09 07:12:15] -rw-------. 1 boincer umatlas        57 Jan  9 00:18 setup.sh.local
[2026-01-09 07:12:15] -rw-------. 1 boincer umatlas    989771 Jan  9 00:19 agis_schedconf.cvmfs.json
[2026-01-09 07:12:15] drwx------. 5 boincer umatlas      4096 Jan  9 00:19 pilot3
[2026-01-09 07:12:15] -rw-------. 1 boincer umatlas 223144292 Jan  9 07:10 HITS.47898826._030372.pool.root.1
[2026-01-09 07:12:15] -rw-r--r--. 1 boincer umatlas       530 Jan  9 07:10 boinc_task_state.xml
[2026-01-09 07:12:15] -rw-------. 1 boincer umatlas      1043 Jan  9 07:10 memory_monitor_summary.json
[2026-01-09 07:12:15] -rw-------. 1 boincer umatlas   1516240 Jan  9 07:11 agis_ddmendpoints.agis.ALL.json
[2026-01-09 07:12:15] -rw-------. 1 boincer umatlas    652161 Jan  9 07:11 log.47898826._030372.job.log.tgz.1
[2026-01-09 07:12:15] -rw-------. 1 boincer umatlas      7822 Jan  9 07:11 heartbeat.json
[2026-01-09 07:12:15] -rw-r--r--. 1 boincer umatlas      6872 Jan  9 07:11 init_data.xml
[2026-01-09 07:12:15] -rw-------. 1 boincer umatlas        95 Jan  9 07:12 pilot_heartbeat.json
[2026-01-09 07:12:15] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 07:12 boinc_mmap_file
[2026-01-09 07:12:15] -rw-r--r--. 1 boincer umatlas        27 Jan  9 07:12 wrapper_checkpoint.txt
[2026-01-09 07:12:15] -rw-------. 1 boincer umatlas      5009 Jan  9 07:12 pilotlog.txt
[2026-01-09 07:12:15] -rw-------. 1 boincer umatlas   2968186 Jan  9 07:12 log.47898826._030372.job.log.1
[2026-01-09 07:12:15] -rw-------. 1 boincer umatlas       357 Jan  9 07:12 output.list
[2026-01-09 07:12:15] -rw-r--r--. 1 boincer umatlas       620 Jan  9 07:12 runtime_log
[2026-01-09 07:12:15] -rw-------. 1 boincer umatlas   3635200 Jan  9 07:12 result.tar.gz
[2026-01-09 07:12:15] -rw-r--r--. 1 boincer umatlas      9345 Jan  9 07:12 runtime_log.err
[2026-01-09 07:12:15] -rw-------. 1 boincer umatlas       656 Jan  9 07:12 49CMDm8VAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6AlKDmuNuHNn.diag
[2026-01-09 07:12:15] -rw-r--r--. 1 boincer umatlas     21180 Jan  9 07:12 stderr.txt
[2026-01-09 07:12:15] HITS file was successfully produced:
[2026-01-09 07:12:15] -rw-------. 1 boincer umatlas 223144292 Jan  9 07:10 shared/HITS.pool.root.1
[2026-01-09 07:12:15]  *** Contents of shared directory: ***
[2026-01-09 07:12:15] total 441132
[2026-01-09 07:12:15] -rw-r--r--. 2 boincer umatlas 224313430 Jan  9 00:18 ATLAS.root_0
[2026-01-09 07:12:15] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:18 start_atlas.sh
[2026-01-09 07:12:15] -rw-r--r--. 2 boincer umatlas    592388 Jan  9 00:18 input.tar.gz
[2026-01-09 07:12:15] -rw-------. 1 boincer umatlas 223144292 Jan  9 07:10 HITS.pool.root.1
[2026-01-09 07:12:15] -rw-------. 1 boincer umatlas   3635200 Jan  9 07:12 result.tar.gz
07:12:17 (486896): run_atlas exited; CPU time 55627.326833
07:12:17 (486896): called boinc_finish(0)

</stderr_txt>
]]>

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