Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:43:35 (940958): wrapper (7.7.26015): starting
01:43:35 (940958): wrapper: running run_atlas (--nthreads 10)
[2026-01-09 01:43:35] Arguments: --nthreads 10
[2026-01-09 01:43:35] Threads: 10
[2026-01-09 01:43:35] Checking for CVMFS
[2026-01-09 01:43:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 01:43:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 01:43:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 01:43:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 01:43:37] 2.13.3.0 11959 93066 402344 154934 3 107 27559098 32935937 19266 16776704 0 365881142 99.467 494391947 33981 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 01:43:37] CVMFS is ok
[2026-01-09 01:43:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 01:43:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 01:43:37] Further information can be found at the LHC@home message board.
[2026-01-09 01:43:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 01:43:37] Checking for apptainer binary...
[2026-01-09 01:43:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 01:43:37] Running /usr/bin/apptainer --version
[2026-01-09 01:43:37] apptainer version 1.4.5-2.el9
[2026-01-09 01:43:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 01:43:58] c6-12-27-3.aglt2.org
[2026-01-09 01:43:58] apptainer works
[2026-01-09 01:43:58] Set ATHENA_PROC_NUMBER=10
[2026-01-09 01:43:58] Set ATHENA_CORE_NUMBER=10
[2026-01-09 01:43:58] Starting ATLAS job with PandaID=6963076090
[2026-01-09 01:43:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:09:16]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:09:16] 2026-01-09 13:08:35,629 | INFO     | PID=948859 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 08:09:16] 2026-01-09 13:08:35,629 | INFO     | .. there are 17 such processes running
[2026-01-09 08:09:16] 2026-01-09 13:08:36,215 | INFO     | monitor loop #1373: job 0:6963076090 is in state 'finished'
[2026-01-09 08:09:16] 2026-01-09 13:08:36,215 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 08:09:16] 2026-01-09 13:08:36,630 | INFO     | time since job start (23003s) is within the limit (174528.0s)
[2026-01-09 08:09:16] 2026-01-09 13:08:38,637 | INFO     | time since job start (23005s) is within the limit (174528.0s)
[2026-01-09 08:09:16] 2026-01-09 13:08:38,720 | INFO     | monitor loop #1374: job 0:6963076090 is in state 'finished'
[2026-01-09 08:09:16] 2026-01-09 13:08:38,720 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 08:09:16] 2026-01-09 13:08:40,648 | INFO     | time since job start (23007s) is within the limit (174528.0s)
[2026-01-09 08:09:16] 2026-01-09 13:08:40,769 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 08:09:16] 2026-01-09 13:08:40,808 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2650.994906250001
[2026-01-09 08:09:16] 2026-01-09 13:08:40,864 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963076090/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:09:16] 2026-01-09 13:08:40,865 | INFO     | extracted standard info from prmon json
[2026-01-09 08:09:16] 2026-01-09 13:08:40,865 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:09:16] 2026-01-09 13:08:40,865 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:09:16] 2026-01-09 13:08:40,865 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:09:16] 2026-01-09 13:08:40,865 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:09:16] 2026-01-09 13:08:40,880 | INFO     | fitting pss+swap vs Time
[2026-01-09 08:09:16] 2026-01-09 13:08:40,889 | INFO     | sum of square deviations: 16351909633.983912
[2026-01-09 08:09:16] 2026-01-09 13:08:40,901 | INFO     | sum of deviations: 139073135573.8323
[2026-01-09 08:09:16] 2026-01-09 13:08:40,901 | INFO     | mean x: 1767952642.376
[2026-01-09 08:09:16] 2026-01-09 13:08:40,902 | INFO     | mean y: 2565629.7813333333
[2026-01-09 08:09:16] 2026-01-09 13:08:40,902 | INFO     | intersect: -15033887177.557756
[2026-01-09 08:09:16] 2026-01-09 13:08:40,902 | INFO     | chi2: 3.5591713749255316
[2026-01-09 08:09:16] 2026-01-09 13:08:40,903 | INFO     | sum of square deviations: 15706554490.767637
[2026-01-09 08:09:16] 2026-01-09 13:08:40,915 | INFO     | sum of deviations: 161454397851.21622
[2026-01-09 08:09:16] 2026-01-09 13:08:40,915 | INFO     | mean x: 1767952489.881081
[2026-01-09 08:09:16] 2026-01-09 13:08:40,915 | INFO     | mean y: 2570855.4594594594
[2026-01-09 08:09:16] 2026-01-09 13:08:40,915 | INFO     | intersect: -18170969678.277145
[2026-01-09 08:09:16] 2026-01-09 13:08:40,916 | INFO     | chi2: 2.865894309578904
[2026-01-09 08:09:16] 2026-01-09 13:08:40,916 | INFO     | current chi2=2.865894309578904 (change=19.47860870737457 %)
[2026-01-09 08:09:16] 2026-01-09 13:08:40,916 | INFO     | right removable region: 369
[2026-01-09 08:09:16] 2026-01-09 13:08:40,925 | INFO     | sum of square deviations: 15706468480.767612
[2026-01-09 08:09:16] 2026-01-09 13:08:40,928 | INFO     | sum of deviations: 38336543722.94595
[2026-01-09 08:09:16] 2026-01-09 13:08:40,929 | INFO     | mean x: 1767952794.881081
[2026-01-09 08:09:16] 2026-01-09 13:08:40,937 | INFO     | mean y: 2589387.135135135
[2026-01-09 08:09:16] 2026-01-09 13:08:40,937 | INFO     | intersect: -4312651795.442314
[2026-01-09 08:09:16] 2026-01-09 13:08:40,938 | INFO     | chi2: 1.0042221274402774
[2026-01-09 08:09:16] 2026-01-09 13:08:40,938 | INFO     | current chi2=1.0042221274402774 (change=71.78494594233219 %)
[2026-01-09 08:09:16] 2026-01-09 13:08:40,938 | INFO     | sum of square deviations: 15078236952.531534
[2026-01-09 08:09:16] 2026-01-09 13:08:40,949 | INFO     | sum of deviations: 11596007476.320557
[2026-01-09 08:09:16] 2026-01-09 13:08:40,949 | INFO     | mean x: 1767952947.3863013
[2026-01-09 08:09:16] 2026-01-09 13:08:40,949 | INFO     | mean y: 2595865.104109589
[2026-01-09 08:09:16] 2026-01-09 13:08:40,949 | INFO     | intersect: -1357058825.3093145
[2026-01-09 08:09:16] 2026-01-09 13:08:40,950 | INFO     | chi2: 0.8333963635822658
[2026-01-09 08:09:16] 2026-01-09 13:08:40,950 | INFO     | current chi2=0.8333963635822658 (change=17.010754811133246 %)
[2026-01-09 08:09:16] 2026-01-09 13:08:40,950 | INFO     | left removable region: 20
[2026-01-09 08:09:16] 2026-01-09 13:08:40,958 | INFO     | sum of square deviations: 13180983351.220695
[2026-01-09 08:09:16] 2026-01-09 13:08:40,961 | INFO     | sum of deviations: 24179232198.091694
[2026-01-09 08:09:16] 2026-01-09 13:08:40,961 | INFO     | mean x: 1767953069.3925502
[2026-01-09 08:09:16] 2026-01-09 13:08:40,961 | INFO     | mean y: 2604377.189111748
[2026-01-09 08:09:16] 2026-01-09 13:08:40,961 | INFO     | intersect: -3240533607.3689604
[2026-01-09 08:09:16] 2026-01-09 13:08:40,970 | INFO     | chi2: 0.10307877108979768
[2026-01-09 08:09:16] 2026-01-09 13:08:40,970 | INFO     | current memory leak: 1.83 B/s (using 349 data points, chi2=0.10)
[2026-01-09 08:09:16] 2026-01-09 13:08:40,971 | INFO     | could have reported an average CPU frequency of 2642 MHz (16 samples)
[2026-01-09 08:09:16] 2026-01-09 13:08:40,971 | INFO     | ..............................
[2026-01-09 08:09:16] 2026-01-09 13:08:40,971 | INFO     | . Timing measurements:
[2026-01-09 08:09:16] 2026-01-09 13:08:40,971 | INFO     | . get job = 0 s
[2026-01-09 08:09:16] 2026-01-09 13:08:40,971 | INFO     | . initial setup = 5 s
[2026-01-09 08:09:16] 2026-01-09 13:08:40,971 | INFO     | . payload setup = 37 s
[2026-01-09 08:09:16] 2026-01-09 13:08:40,971 | INFO     | . stage-in = 0 s
[2026-01-09 08:09:16] 2026-01-09 13:08:40,971 | INFO     | . payload execution = 22868 s
[2026-01-09 08:09:16] 2026-01-09 13:08:40,972 | INFO     | . stage-out = 4 s
[2026-01-09 08:09:16] 2026-01-09 13:08:40,972 | INFO     | . log creation = 0 s
[2026-01-09 08:09:16] 2026-01-09 13:08:40,972 | INFO     | ..............................
[2026-01-09 08:09:16] 2026-01-09 13:08:41,352 | INFO     | 
[2026-01-09 08:09:16] 2026-01-09 13:08:41,352 | INFO     | job summary report
[2026-01-09 08:09:16] 2026-01-09 13:08:41,352 | INFO     | --------------------------------------------------
[2026-01-09 08:09:16] 2026-01-09 13:08:41,352 | INFO     | PanDA job id: 6963076090
[2026-01-09 08:09:16] 2026-01-09 13:08:41,352 | INFO     | task id: 47898826
[2026-01-09 08:09:16] 2026-01-09 13:08:41,352 | INFO     | errors: (none)
[2026-01-09 08:09:16] 2026-01-09 13:08:41,352 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:09:16] 2026-01-09 13:08:41,352 | INFO     | pilot state: finished 
[2026-01-09 08:09:16] 2026-01-09 13:08:41,352 | INFO     | transexitcode: 0
[2026-01-09 08:09:16] 2026-01-09 13:08:41,353 | INFO     | exeerrorcode: 0
[2026-01-09 08:09:16] 2026-01-09 13:08:41,353 | INFO     | exeerrordiag: 
[2026-01-09 08:09:16] 2026-01-09 13:08:41,353 | INFO     | exitcode: 0
[2026-01-09 08:09:16] 2026-01-09 13:08:41,353 | INFO     | exitmsg: OK
[2026-01-09 08:09:16] 2026-01-09 13:08:41,353 | INFO     | cpuconsumptiontime: 62137 s
[2026-01-09 08:09:16] 2026-01-09 13:08:41,353 | INFO     | nevents: 400
[2026-01-09 08:09:16] 2026-01-09 13:08:41,353 | INFO     | neventsw: 0
[2026-01-09 08:09:16] 2026-01-09 13:08:41,353 | INFO     | pid: 956476
[2026-01-09 08:09:16] 2026-01-09 13:08:41,353 | INFO     | pgrp: 956476
[2026-01-09 08:09:16] 2026-01-09 13:08:41,353 | INFO     | corecount: 10
[2026-01-09 08:09:16] 2026-01-09 13:08:41,353 | INFO     | event service: False
[2026-01-09 08:09:16] 2026-01-09 13:08:41,353 | INFO     | sizes: {0: 2283798, 1: 2283997, 12: 2283997, 23: 2284025, 34: 2284053, 36: 2284343, 45: 2284499, 22910: 2318900, 22914: 2327898, 22917: 2327982, 22945: 2328176}
[2026-01-09 08:09:16] 2026-01-09 13:08:41,353 | INFO     | --------------------------------------------------
[2026-01-09 08:09:16] 2026-01-09 13:08:41,354 | INFO     | 
[2026-01-09 08:09:16] 2026-01-09 13:08:41,354 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 08:09:16] 2026-01-09 13:08:41,472 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,473 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,473 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,473 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,474 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:09:16] 2026-01-09 13:08:41,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,474 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:09:16] 2026-01-09 13:08:41,474 | INFO     | job 6963076090 has completed (purged errors)
[2026-01-09 08:09:16] 2026-01-09 13:08:41,474 | INFO     | overall cleanup function is called
[2026-01-09 08:09:16] 2026-01-09 13:08:42,497 | INFO     | --- collectZombieJob: --- 10, [956476]
[2026-01-09 08:09:16] 2026-01-09 13:08:42,497 | INFO     | zombie collector waiting for pid 956476
[2026-01-09 08:09:16] 2026-01-09 13:08:42,497 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:09:16] 2026-01-09 13:08:42,497 | INFO     | collected zombie processes
[2026-01-09 08:09:16] 2026-01-09 13:08:42,497 | INFO     | will attempt to kill all subprocesses of pid=956476
[2026-01-09 08:09:16] 2026-01-09 13:08:43,683 | INFO     | process IDs to be killed: [956476] (in reverse order)
[2026-01-09 08:09:16] 2026-01-09 13:08:44,131 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:09:16] 2026-01-09 13:08:44,131 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:09:16] 2026-01-09 13:08:44,160 | INFO     | did not find any defunct processes belonging to 956476
[2026-01-09 08:09:16] 2026-01-09 13:08:44,192 | INFO     | did not find any defunct processes belonging to 956476
[2026-01-09 08:09:16] 2026-01-09 13:08:44,192 | INFO     | ready for new job
[2026-01-09 08:09:16] 2026-01-09 13:08:44,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:09:16] 2026-01-09 13:08:44,199 | INFO     | ***************************************
[2026-01-09 08:09:16] 2026-01-09 13:08:44,199 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:09:16] 2026-01-09 13:08:44,199 | INFO     | ***************************************
[2026-01-09 08:09:16] 2026-01-09 13:08:44,199 | INFO     | 
[2026-01-09 08:09:16] 2026-01-09 13:08:44,210 | INFO     | architecture information:
[2026-01-09 08:09:16] 2026-01-09 13:08:44,219 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:09:16] 2026-01-09 13:08:44,340 | INFO     | cat /etc/os-release:
[2026-01-09 08:09:16] NAME="CentOS Linux"
[2026-01-09 08:09:16] VERSION="7 (Core)"
[2026-01-09 08:09:16] ID="centos"
[2026-01-09 08:09:16] ID_LIKE="rhel fedora"
[2026-01-09 08:09:16] VERSION_ID="7"
[2026-01-09 08:09:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:09:16] ANSI_COLOR="0;31"
[2026-01-09 08:09:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:09:16] HOME_URL="https://www.centos.org/"
[2026-01-09 08:09:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:09:16] 
[2026-01-09 08:09:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:09:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:09:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:09:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:09:16] 
[2026-01-09 08:09:16] 2026-01-09 13:08:44,340 | INFO     | ***************************************
[2026-01-09 08:09:16] 2026-01-09 13:08:44,844 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 08:09:16] 2026-01-09 13:08:44,899 | INFO     | sufficient remaining disk space (94087675904 B)
[2026-01-09 08:09:16] 2026-01-09 13:08:44,899 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:09:16] 2026-01-09 13:08:44,900 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:09:16] 2026-01-09 13:08:44,900 | INFO     | update_server=False
[2026-01-09 08:09:16] 2026-01-09 13:08:44,900 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:09:16] 2026-01-09 13:08:44,901 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:09:16] 2026-01-09 13:08:44,901 | INFO     | aborting loop
[2026-01-09 08:09:16] 2026-01-09 13:08:45,618 | INFO     | all data control threads have been joined
[2026-01-09 08:09:16] 2026-01-09 13:08:45,629 | INFO     | all job control threads have been joined
[2026-01-09 08:09:16] 2026-01-09 13:08:45,906 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:09:16] 2026-01-09 13:08:45,907 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:09:16] 2026-01-09 13:08:45,914 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:09:16] 2026-01-09 13:08:45,918 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:09:16] 2026-01-09 13:08:45,989 | INFO     | [job] validate thread has finished
[2026-01-09 08:09:16] 2026-01-09 13:08:46,032 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:09:16] 2026-01-09 13:08:46,108 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:09:16] 2026-01-09 13:08:46,235 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:09:16] 2026-01-09 13:08:46,327 | INFO     | all payload control threads have been joined
[2026-01-09 08:09:16] 2026-01-09 13:08:46,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:09:16] 2026-01-09 13:08:46,554 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:09:16] 2026-01-09 13:08:46,624 | INFO     | [data] control thread has finished
[2026-01-09 08:09:16] 2026-01-09 13:08:46,635 | INFO     | [job] control thread has finished
[2026-01-09 08:09:16] 2026-01-09 13:08:46,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:09:16] 2026-01-09 13:08:46,715 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:09:16] 2026-01-09 13:08:46,715 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:09:16] 2026-01-09 13:08:47,333 | INFO     | [payload] control thread has finished
[2026-01-09 08:09:16] 2026-01-09 13:08:47,380 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:09:16] 2026-01-09 13:08:48,242 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:09:16] 2026-01-09 13:08:50,722 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:09:16] 2026-01-09 13:08:52,773 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:09:16] 2026-01-09 13:08:53,394 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139917500176192)>', '<ExcThread(monitor, started 139917227169536)>']
[2026-01-09 08:09:16] 2026-01-09 13:08:58,420 | INFO     | all workflow threads have been joined
[2026-01-09 08:09:16] 2026-01-09 13:08:58,420 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:09:16] 2026-01-09 13:08:58,420 | INFO     | traces error code: 0
[2026-01-09 08:09:16] 2026-01-09 13:08:58,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:09:16] 2026-01-09 13:09:15,554 | INFO     | PID=948859 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 08:09:16] 2026-01-09 13:09:15,555 | INFO     | .. there are 17 such processes running
[2026-01-09 08:09:16] 2026-01-09 13:09:15,555 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:09:16] 2026-01-09 13:09:15,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:09:16] 2026-01-09 13:09:15,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:09:16] 2026-01-09 13:09:15,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:09:16] 2026-01-09 13:09:15,555 | INFO     | [monitor] control thread has ended
[2026-01-09 08:09:16] 2026-01-09 13:09:16,007 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:09:16] 2026-01-09 13:09:16,041 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:09:16] 2026-01-09 13:09:16,094 [wrapper] pilotpid: 948859
[2026-01-09 08:09:16] 2026-01-09 13:09:16,114 [wrapper] Pilot exit status: 0
[2026-01-09 08:09:16] 2026-01-09 13:09:16,265 [wrapper] pandaids: 6963076090
[2026-01-09 08:09:16] 2026-01-09 13:09:16,478 [wrapper] cleanup supervisor_pilot 1860733 948860
[2026-01-09 08:09:16] 2026-01-09 13:09:16,481 [wrapper] Test setup, not cleaning
[2026-01-09 08:09:16] 2026-01-09 13:09:16,483 [wrapper] apfmon messages muted
[2026-01-09 08:09:16] 2026-01-09 13:09:16,485 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:09:16] 2026-01-09 13:09:16,488 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:09:16]  *** Error codes and diagnostics ***
[2026-01-09 08:09:16]     "exeErrorCode": 0,
[2026-01-09 08:09:16]     "exeErrorDiag": "",
[2026-01-09 08:09:16]     "pilotErrorCode": 0,
[2026-01-09 08:09:16]     "pilotErrorDiag": "",
[2026-01-09 08:09:16]  *** Listing of results directory ***
[2026-01-09 08:09:16] total 452232
[2026-01-09 08:09:16] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:06 pilot3.tar.gz
[2026-01-09 08:09:16] -rwx------. 1 boincer umatlas     36322 Jan  8 06:07 runpilot2-wrapper.sh
[2026-01-09 08:09:16] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:07 queuedata.json
[2026-01-09 08:09:16] -rw-r--r--. 1 boincer umatlas       100 Jan  9 01:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:09:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 01:43 run_atlas
[2026-01-09 08:09:16] -rw-r--r--. 1 boincer umatlas       105 Jan  9 01:43 job.xml
[2026-01-09 08:09:16] -rw-r--r--. 2 boincer umatlas 225981774 Jan  9 01:43 EVNT.47898824._000938.pool.root.1
[2026-01-09 08:09:16] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 01:43 start_atlas.sh
[2026-01-09 08:09:16] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 01:43 shared
[2026-01-09 08:09:16] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 01:43 input.tar.gz
[2026-01-09 08:09:16] -rw-r--r--. 1 boincer umatlas         0 Jan  9 01:43 boinc_lockfile
[2026-01-09 08:09:16] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 01:43 pandaJob.out
[2026-01-09 08:09:16] -rw-------. 1 boincer umatlas        57 Jan  9 01:44 setup.sh.local
[2026-01-09 08:09:16] -rw-------. 1 boincer umatlas    989771 Jan  9 01:45 agis_schedconf.cvmfs.json
[2026-01-09 08:09:16] drwx------. 5 boincer umatlas      4096 Jan  9 01:45 pilot3
[2026-01-09 08:09:16] -rw-r--r--. 1 boincer umatlas      6878 Jan  9 08:00 init_data.xml
[2026-01-09 08:09:16] -rw-------. 1 boincer umatlas 226350214 Jan  9 08:06 HITS.47898826._023530.pool.root.1
[2026-01-09 08:09:16] -rw-r--r--. 1 boincer umatlas       531 Jan  9 08:07 boinc_task_state.xml
[2026-01-09 08:09:16] -rw-------. 1 boincer umatlas      1042 Jan  9 08:08 memory_monitor_summary.json
[2026-01-09 08:09:16] -rw-------. 1 boincer umatlas   1516240 Jan  9 08:08 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:09:16] -rw-------. 1 boincer umatlas    581820 Jan  9 08:08 log.47898826._023530.job.log.tgz.1
[2026-01-09 08:09:16] -rw-------. 1 boincer umatlas        95 Jan  9 08:08 pilot_heartbeat.json
[2026-01-09 08:09:16] -rw-------. 1 boincer umatlas      7830 Jan  9 08:08 heartbeat.json
[2026-01-09 08:09:16] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 08:08 boinc_mmap_file
[2026-01-09 08:09:16] -rw-r--r--. 1 boincer umatlas        28 Jan  9 08:08 wrapper_checkpoint.txt
[2026-01-09 08:09:16] -rw-------. 1 boincer umatlas       822 Jan  9 08:09 pilotlog.txt
[2026-01-09 08:09:16] -rw-------. 1 boincer umatlas   2834821 Jan  9 08:09 log.47898826._023530.job.log.1
[2026-01-09 08:09:16] -rw-------. 1 boincer umatlas       357 Jan  9 08:09 output.list
[2026-01-09 08:09:16] -rw-r--r--. 1 boincer umatlas       620 Jan  9 08:09 runtime_log
[2026-01-09 08:09:16] -rw-------. 1 boincer umatlas   3440640 Jan  9 08:09 result.tar.gz
[2026-01-09 08:09:16] -rw-------. 1 boincer umatlas       659 Jan  9 08:09 wxxMDmD22x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxBkKDmEovSRo.diag
[2026-01-09 08:09:16] -rw-r--r--. 1 boincer umatlas      9355 Jan  9 08:09 runtime_log.err
[2026-01-09 08:09:16] -rw-r--r--. 1 boincer umatlas     21516 Jan  9 08:09 stderr.txt
[2026-01-09 08:09:16] HITS file was successfully produced:
[2026-01-09 08:09:16] -rw-------. 1 boincer umatlas 226350214 Jan  9 08:06 shared/HITS.pool.root.1
[2026-01-09 08:09:16]  *** Contents of shared directory: ***
[2026-01-09 08:09:16] total 445696
[2026-01-09 08:09:16] -rw-r--r--. 2 boincer umatlas 225981774 Jan  9 01:43 ATLAS.root_0
[2026-01-09 08:09:16] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 01:43 start_atlas.sh
[2026-01-09 08:09:16] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 01:43 input.tar.gz
[2026-01-09 08:09:16] -rw-------. 1 boincer umatlas 226350214 Jan  9 08:06 HITS.pool.root.1
[2026-01-09 08:09:16] -rw-------. 1 boincer umatlas   3440640 Jan  9 08:09 result.tar.gz
08:09:18 (940958): run_atlas exited; CPU time 63077.175923
08:09:18 (940958): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN