Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:19:29 (3446547): wrapper (7.7.26015): starting
14:19:29 (3446547): wrapper: running run_atlas (--nthreads 2)
[2026-01-09 14:19:29] Arguments: --nthreads 2
[2026-01-09 14:19:29] Threads: 2
[2026-01-09 14:19:29] Checking for CVMFS
[2026-01-09 14:19:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:19:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:19:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:19:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:19:30] 2.9.2.0 3119360 1750 58308 154945 1 56 18937542 36864001 0 130560 0 829634 99.985 64319 4450 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 14:19:30] CVMFS is ok
[2026-01-09 14:19:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:19:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:19:30] Further information can be found at the LHC@home message board.
[2026-01-09 14:19:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:19:30] Checking for apptainer binary...
[2026-01-09 14:19:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:19:30] Running /usr/bin/apptainer --version
[2026-01-09 14:19:30] apptainer version 1.4.1-1.1
[2026-01-09 14:19:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:19:30] thA314b
[2026-01-09 14:19:30] apptainer works
[2026-01-09 14:19:30] Set ATHENA_PROC_NUMBER=2
[2026-01-09 14:19:30] Set ATHENA_CORE_NUMBER=2
[2026-01-09 14:19:30] Starting ATLAS job with PandaID=6963155261
[2026-01-09 14:19:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:16:04]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:16:04] 2026-01-09 16:15:14,625 | INFO     | [job] control thread has finished
[2026-01-09 17:16:04] 2026-01-09 16:15:14,662 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:16:04] 2026-01-09 16:15:14,768 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:16:04] 2026-01-09 16:15:14,989 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:16:04] 2026-01-09 16:15:14,990 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:16:04] 2026-01-09 16:15:15,388 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:16:04] 2026-01-09 16:15:15,388 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:16:04] 2026-01-09 16:15:15,656 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:16:04] 2026-01-09 16:15:16,482 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:16:04] 2026-01-09 16:15:19,395 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:16:04] 2026-01-09 16:15:23,767 | INFO     | job.realtimelogging is not enabled
[2026-01-09 17:16:04] 2026-01-09 16:15:24,773 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:16:04] 2026-01-09 16:15:43,576 | INFO     | PID=3450262 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 17:16:04] 2026-01-09 16:15:43,576 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:16:04] 2026-01-09 16:15:43,576 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:16:04] 2026-01-09 16:15:43,576 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:16:04] 2026-01-09 16:15:58,523 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:16:04] 2026-01-09 16:15:59,529 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140270987118400)>', '<ExcThread(monitor, started 140270117046016)>']
[2026-01-09 17:16:04] 2026-01-09 16:15:59,653 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:16:04] 2026-01-09 16:15:59,653 | INFO     | [monitor] control thread has ended
[2026-01-09 17:16:04] 2026-01-09 16:16:04,548 | INFO     | all workflow threads have been joined
[2026-01-09 17:16:04] 2026-01-09 16:16:04,549 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:16:04] 2026-01-09 16:16:04,549 | INFO     | traces error code: 0
[2026-01-09 17:16:04] 2026-01-09 16:16:04,550 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:16:04] 2026-01-09 16:16:04,591 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:16:04] 2026-01-09 16:16:04,594 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:16:04] 2026-01-09 16:16:04,595 [wrapper] pilotpid: 3450262
[2026-01-09 17:16:04] 2026-01-09 16:16:04,598 [wrapper] Pilot exit status: 0
[2026-01-09 17:16:04] 2026-01-09 16:16:04,603 [wrapper] pandaids: 6963155261
[2026-01-09 17:16:04] 2026-01-09 16:16:04,617 [wrapper] cleanup supervisor_pilot 3475488 3450263
[2026-01-09 17:16:04] 2026-01-09 16:16:04,619 [wrapper] Test setup, not cleaning
[2026-01-09 17:16:04] 2026-01-09 16:16:04,621 [wrapper] apfmon messages muted
[2026-01-09 17:16:04] 2026-01-09 16:16:04,623 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:16:04] 2026-01-09 16:16:04,625 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:16:04]  *** Error codes and diagnostics ***
[2026-01-09 17:16:04]     "exeErrorCode": 0,
[2026-01-09 17:16:04]     "exeErrorDiag": "",
[2026-01-09 17:16:04]     "pilotErrorCode": 0,
[2026-01-09 17:16:04]     "pilotErrorDiag": "",
[2026-01-09 17:16:04]  *** Listing of results directory ***
[2026-01-09 17:16:04] total 442572
[2026-01-09 17:16:04] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 17:16:04] -rwx------ 1 boinc boinc     36322 Jan  8 20:06 runpilot2-wrapper.sh
[2026-01-09 17:16:04] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:07 queuedata.json
[2026-01-09 17:16:04] -rw-r--r-- 1 boinc boinc       100 Jan  9 14:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:16:04] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 14:19 run_atlas
[2026-01-09 17:16:04] -rw-r--r-- 1 boinc boinc       105 Jan  9 14:19 job.xml
[2026-01-09 17:16:04] -rw-r--r-- 2 boinc boinc 224015239 Jan  9 14:19 EVNT.47898824._001181.pool.root.1
[2026-01-09 17:16:04] -rw-r--r-- 2 boinc boinc    592391 Jan  9 14:19 input.tar.gz
[2026-01-09 17:16:04] -rw-r--r-- 2 boinc boinc     15847 Jan  9 14:19 start_atlas.sh
[2026-01-09 17:16:04] drwxrwx--x 2 boinc boinc      4096 Jan  9 14:19 shared
[2026-01-09 17:16:04] -rw-r--r-- 1 boinc boinc         0 Jan  9 14:19 boinc_setup_complete
[2026-01-09 17:16:04] -rw-r--r-- 1 boinc boinc      6206 Jan  9 14:19 init_data.xml
[2026-01-09 17:16:04] -rw-r--r-- 1 boinc boinc         0 Jan  9 14:19 boinc_lockfile
[2026-01-09 17:16:04] -rw-r--r-- 1 boinc boinc      2519 Jan  9 14:19 pandaJob.out
[2026-01-09 17:16:04] -rw------- 1 boinc boinc    989377 Jan  9 14:19 agis_schedconf.cvmfs.json
[2026-01-09 17:16:04] -rw------- 1 boinc boinc   1516240 Jan  9 14:19 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:16:04] drwx------ 5 boinc boinc      4096 Jan  9 14:19 pilot3
[2026-01-09 17:16:04] -rw------- 1 boinc boinc 221650129 Jan  9 17:14 HITS.47898826._030511.pool.root.1
[2026-01-09 17:16:04] -rw-r--r-- 1 boinc boinc       530 Jan  9 17:14 boinc_task_state.xml
[2026-01-09 17:16:04] -rw------- 1 boinc boinc      1016 Jan  9 17:14 memory_monitor_summary.json
[2026-01-09 17:16:04] -rw------- 1 boinc boinc    316209 Jan  9 17:15 log.47898826._030511.job.log.tgz.1
[2026-01-09 17:16:04] -rw------- 1 boinc boinc      7757 Jan  9 17:15 heartbeat.json
[2026-01-09 17:16:04] -rw------- 1 boinc boinc        95 Jan  9 17:15 pilot_heartbeat.json
[2026-01-09 17:16:04] -rw-r--r-- 1 boinc boinc        28 Jan  9 17:16 wrapper_checkpoint.txt
[2026-01-09 17:16:04] -rw-r--r-- 1 boinc boinc      8192 Jan  9 17:16 boinc_mmap_file
[2026-01-09 17:16:04] -rw------- 1 boinc boinc      5010 Jan  9 17:16 pilotlog.txt
[2026-01-09 17:16:04] -rw------- 1 boinc boinc   1495541 Jan  9 17:16 log.47898826._030511.job.log.1
[2026-01-09 17:16:04] -rw------- 1 boinc boinc       357 Jan  9 17:16 output.list
[2026-01-09 17:16:04] -rw-r--r-- 1 boinc boinc       620 Jan  9 17:16 runtime_log
[2026-01-09 17:16:04] -rw------- 1 boinc boinc   1832960 Jan  9 17:16 result.tar.gz
[2026-01-09 17:16:04] -rw-r--r-- 1 boinc boinc      8903 Jan  9 17:16 runtime_log.err
[2026-01-09 17:16:04] -rw------- 1 boinc boinc       663 Jan  9 17:16 IMVMDm9VAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4xfKDmCBC7sm.diag
[2026-01-09 17:16:04] -rw-r--r-- 1 boinc boinc      5950 Jan  9 17:16 stderr.txt
[2026-01-09 17:16:04] HITS file was successfully produced:
[2026-01-09 17:16:04] -rw------- 1 boinc boinc 221650129 Jan  9 17:14 shared/HITS.pool.root.1
[2026-01-09 17:16:04]  *** Contents of shared directory: ***
[2026-01-09 17:16:04] total 437620
[2026-01-09 17:16:04] -rw-r--r-- 2 boinc boinc 224015239 Jan  9 14:19 ATLAS.root_0
[2026-01-09 17:16:04] -rw-r--r-- 2 boinc boinc    592391 Jan  9 14:19 input.tar.gz
[2026-01-09 17:16:04] -rw-r--r-- 2 boinc boinc     15847 Jan  9 14:19 start_atlas.sh
[2026-01-09 17:16:04] -rw------- 1 boinc boinc 221650129 Jan  9 17:14 HITS.pool.root.1
[2026-01-09 17:16:04] -rw------- 1 boinc boinc   1832960 Jan  9 17:16 result.tar.gz
17:16:05 (3446547): run_atlas exited; CPU time 20672.572150
17:16:05 (3446547): called boinc_finish(0)

</stderr_txt>
]]>

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