Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:19:25 (1811505): wrapper (7.7.26015): starting
00:19:25 (1811505): wrapper: running run_atlas (--nthreads 11)
[2026-01-09 00:19:25] Arguments: --nthreads 11
[2026-01-09 00:19:25] Threads: 11
[2026-01-09 00:19:25] Checking for CVMFS
[2026-01-09 00:19:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:19:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:19:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:19:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:19:29] 2.13.3.0 8602 92895 407932 154933 0 205 14698168 21042176 25768 16776704 0 369106521 99.426 531868038 33298 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:19:29] CVMFS is ok
[2026-01-09 00:19:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:19:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:19:29] Further information can be found at the LHC@home message board.
[2026-01-09 00:19:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:19:29] Checking for apptainer binary...
[2026-01-09 00:19:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:19:29] Running /usr/bin/apptainer --version
[2026-01-09 00:19:29] apptainer version 1.4.5-2.el9
[2026-01-09 00:19:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:19:30] c-16-16.aglt2.org
[2026-01-09 00:19:30] apptainer works
[2026-01-09 00:19:30] Set ATHENA_PROC_NUMBER=11
[2026-01-09 00:19:30] Set ATHENA_CORE_NUMBER=11
[2026-01-09 00:19:31] Starting ATLAS job with PandaID=6963153565
[2026-01-09 00:19:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:52:34]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:52:34] 2026-01-09 22:51:32,456 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2900.002925
[2026-01-09 17:52:34] 2026-01-09 22:51:32,515 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963153565/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:52:34] 2026-01-09 22:51:32,541 | INFO     | extracted standard info from prmon json
[2026-01-09 17:52:34] 2026-01-09 22:51:32,541 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:52:34] 2026-01-09 22:51:32,541 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:52:34] 2026-01-09 22:51:32,542 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:52:34] 2026-01-09 22:51:32,542 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:52:34] 2026-01-09 22:51:32,620 | INFO     | monitor loop #2537: job 0:6963153565 is in state 'finished'
[2026-01-09 17:52:34] 2026-01-09 22:51:32,620 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 17:52:34] 2026-01-09 22:51:32,780 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:52:34] 2026-01-09 22:51:32,783 | INFO     | sum of square deviations: 336853006950.12476
[2026-01-09 17:52:34] 2026-01-09 22:51:33,095 | INFO     | sum of deviations: 378616480987.50946
[2026-01-09 17:52:34] 2026-01-09 22:51:33,096 | INFO     | mean x: 1767967657.529183
[2026-01-09 17:52:34] 2026-01-09 22:51:33,096 | INFO     | mean y: 2647428.9163424126
[2026-01-09 17:52:34] 2026-01-09 22:51:33,096 | INFO     | intersect: -1984515158.866464
[2026-01-09 17:52:34] 2026-01-09 22:51:33,098 | INFO     | chi2: 7.225012864647559
[2026-01-09 17:52:34] 2026-01-09 22:51:33,099 | INFO     | sum of square deviations: 331961833269.8019
[2026-01-09 17:52:34] 2026-01-09 22:51:33,202 | INFO     | sum of deviations: 516688213444.866
[2026-01-09 17:52:34] 2026-01-09 22:51:33,203 | INFO     | mean x: 1767967505.034213
[2026-01-09 17:52:34] 2026-01-09 22:51:33,203 | INFO     | mean y: 2651720.889540567
[2026-01-09 17:52:34] 2026-01-09 22:51:33,203 | INFO     | intersect: -2749134418.5196476
[2026-01-09 17:52:34] 2026-01-09 22:51:33,205 | INFO     | chi2: 5.829296901338218
[2026-01-09 17:52:34] 2026-01-09 22:51:33,205 | INFO     | current chi2=5.829296901338218 (change=19.317833607448193 %)
[2026-01-09 17:52:34] 2026-01-09 22:51:33,205 | INFO     | right removable region: 1022
[2026-01-09 17:52:34] 2026-01-09 22:51:33,207 | INFO     | sum of square deviations: 331961375278.99713
[2026-01-09 17:52:34] 2026-01-09 22:51:33,472 | INFO     | sum of deviations: 26140321503.10573
[2026-01-09 17:52:34] 2026-01-09 22:51:33,472 | INFO     | mean x: 1767967810.0312805
[2026-01-09 17:52:34] 2026-01-09 22:51:33,473 | INFO     | mean y: 2658413.6217008797
[2026-01-09 17:52:34] 2026-01-09 22:51:33,473 | INFO     | intersect: -136560334.1091693
[2026-01-09 17:52:34] 2026-01-09 22:51:33,474 | INFO     | chi2: 3.451101163225365
[2026-01-09 17:52:34] 2026-01-09 22:51:33,487 | INFO     | current chi2=3.451101163225365 (change=52.23397898553483 %)
[2026-01-09 17:52:34] 2026-01-09 22:51:33,488 | INFO     | sum of square deviations: 327117388913.43066
[2026-01-09 17:52:34] 2026-01-09 22:51:33,756 | INFO     | sum of deviations: -189659941784.30624
[2026-01-09 17:52:34] 2026-01-09 22:51:33,756 | INFO     | mean x: 1767967962.5324166
[2026-01-09 17:52:34] 2026-01-09 22:51:33,757 | INFO     | mean y: 2665203.6001964635
[2026-01-09 17:52:34] 2026-01-09 22:51:33,757 | INFO     | intersect: 1027718325.8576466
[2026-01-09 17:52:34] 2026-01-09 22:51:33,802 | INFO     | chi2: 2.0081679982727003
[2026-01-09 17:52:34] 2026-01-09 22:51:33,802 | INFO     | current chi2=2.0081679982727003 (change=41.810804630372346 %)
[2026-01-09 17:52:34] 2026-01-09 22:51:33,804 | INFO     | sum of square deviations: 322320814361.925
[2026-01-09 17:52:34] 2026-01-09 22:51:34,031 | INFO     | sum of deviations: -255587762596.4314
[2026-01-09 17:52:34] 2026-01-09 22:51:34,031 | INFO     | mean x: 1767968115.0325766
[2026-01-09 17:52:34] 2026-01-09 22:51:34,031 | INFO     | mean y: 2667298.437314906
[2026-01-09 17:52:34] 2026-01-09 22:51:34,032 | INFO     | intersect: 1404596664.2387218
[2026-01-09 17:52:34] 2026-01-09 22:51:34,055 | INFO     | chi2: 1.865344848618937
[2026-01-09 17:52:34] 2026-01-09 22:51:34,056 | INFO     | current chi2=1.865344848618937 (change=7.112111624954226 %)
[2026-01-09 17:52:34] 2026-01-09 22:51:34,056 | INFO     | left removable region: 30
[2026-01-09 17:52:34] 2026-01-09 22:51:34,057 | INFO     | sum of square deviations: 302687886395.1523
[2026-01-09 17:52:34] 2026-01-09 22:51:34,191 | INFO     | time since job start (63024s) is within the limit (349056.0s)
[2026-01-09 17:52:34] 2026-01-09 22:51:34,296 | INFO     | sum of deviations: -61727939606.654396
[2026-01-09 17:52:34] 2026-01-09 22:51:34,296 | INFO     | mean x: 1767968389.529234
[2026-01-09 17:52:34] 2026-01-09 22:51:34,296 | INFO     | mean y: 2669939.6260080645
[2026-01-09 17:52:34] 2026-01-09 22:51:34,297 | INFO     | intersect: 363216399.7934422
[2026-01-09 17:52:34] 2026-01-09 22:51:34,298 | INFO     | chi2: 0.3286459184648637
[2026-01-09 17:52:34] 2026-01-09 22:51:34,299 | INFO     | current memory leak: -0.20 B/s (using 992 data points, chi2=0.33)
[2026-01-09 17:52:34] 2026-01-09 22:51:34,302 | INFO     | could have reported an average CPU frequency of 2900 MHz (37 samples)
[2026-01-09 17:52:34] 2026-01-09 22:51:34,302 | INFO     | ..............................
[2026-01-09 17:52:34] 2026-01-09 22:51:34,302 | INFO     | . Timing measurements:
[2026-01-09 17:52:34] 2026-01-09 22:51:34,303 | INFO     | . get job = 1 s
[2026-01-09 17:52:34] 2026-01-09 22:51:34,303 | INFO     | . initial setup = 9 s
[2026-01-09 17:52:34] 2026-01-09 22:51:34,303 | INFO     | . payload setup = 74 s
[2026-01-09 17:52:34] 2026-01-09 22:51:34,303 | INFO     | . stage-in = 1 s
[2026-01-09 17:52:34] 2026-01-09 22:51:34,303 | INFO     | . payload execution = 62748 s
[2026-01-09 17:52:34] 2026-01-09 22:51:34,303 | INFO     | . stage-out = 11 s
[2026-01-09 17:52:34] 2026-01-09 22:51:34,303 | INFO     | . log creation = 2 s
[2026-01-09 17:52:34] 2026-01-09 22:51:34,304 | INFO     | ..............................
[2026-01-09 17:52:34] 2026-01-09 22:51:35,409 | INFO     | 
[2026-01-09 17:52:34] 2026-01-09 22:51:35,410 | INFO     | job summary report
[2026-01-09 17:52:34] 2026-01-09 22:51:35,410 | INFO     | --------------------------------------------------
[2026-01-09 17:52:34] 2026-01-09 22:51:35,410 | INFO     | PanDA job id: 6963153565
[2026-01-09 17:52:34] 2026-01-09 22:51:35,410 | INFO     | task id: 47898826
[2026-01-09 17:52:34] 2026-01-09 22:51:35,410 | INFO     | errors: (none)
[2026-01-09 17:52:34] 2026-01-09 22:51:35,411 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:52:34] 2026-01-09 22:51:35,411 | INFO     | pilot state: finished 
[2026-01-09 17:52:34] 2026-01-09 22:51:35,411 | INFO     | transexitcode: 0
[2026-01-09 17:52:34] 2026-01-09 22:51:35,411 | INFO     | exeerrorcode: 0
[2026-01-09 17:52:34] 2026-01-09 22:51:35,411 | INFO     | exeerrordiag: 
[2026-01-09 17:52:34] 2026-01-09 22:51:35,411 | INFO     | exitcode: 0
[2026-01-09 17:52:34] 2026-01-09 22:51:35,412 | INFO     | exitmsg: OK
[2026-01-09 17:52:34] 2026-01-09 22:51:35,412 | INFO     | cpuconsumptiontime: 112479 s
[2026-01-09 17:52:34] 2026-01-09 22:51:35,412 | INFO     | nevents: 400
[2026-01-09 17:52:34] 2026-01-09 22:51:35,412 | INFO     | neventsw: 0
[2026-01-09 17:52:34] 2026-01-09 22:51:35,412 | INFO     | pid: 1844903
[2026-01-09 17:52:34] 2026-01-09 22:51:35,412 | INFO     | pgrp: 1844903
[2026-01-09 17:52:34] 2026-01-09 22:51:35,412 | INFO     | corecount: 11
[2026-01-09 17:52:34] 2026-01-09 22:51:35,413 | INFO     | event service: False
[2026-01-09 17:52:34] 2026-01-09 22:51:35,413 | INFO     | sizes: {0: 2283142, 2: 2283827, 5: 2283827, 6: 2283883, 7: 2284082, 8: 2284110, 20: 2284266, 31: 2284294, 43: 2284322, 55: 2284350, 60: 2284640, 67: 2284948, 62828
[2026-01-09 17:52:34] 2026-01-09 22:51:35,413 | INFO     | --------------------------------------------------
[2026-01-09 17:52:34] 2026-01-09 22:51:35,413 | INFO     | 
[2026-01-09 17:52:34] 2026-01-09 22:51:35,413 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 17:52:34] 2026-01-09 22:51:35,669 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,669 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,670 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,670 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,670 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,670 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,670 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,670 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,671 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,671 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,671 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,671 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,671 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,671 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,671 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,672 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,672 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,672 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:52:34] 2026-01-09 22:51:35,672 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,672 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:52:34] 2026-01-09 22:51:35,694 | INFO     | job 6963153565 has completed (purged errors)
[2026-01-09 17:52:34] 2026-01-09 22:51:35,694 | INFO     | overall cleanup function is called
[2026-01-09 17:52:34] 2026-01-09 22:51:36,738 | INFO     | --- collectZombieJob: --- 10, [1844903]
[2026-01-09 17:52:34] 2026-01-09 22:51:36,738 | INFO     | zombie collector waiting for pid 1844903
[2026-01-09 17:52:34] 2026-01-09 22:51:36,738 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:52:34] 2026-01-09 22:51:36,738 | INFO     | collected zombie processes
[2026-01-09 17:52:34] 2026-01-09 22:51:36,738 | INFO     | will attempt to kill all subprocesses of pid=1844903
[2026-01-09 17:52:34] 2026-01-09 22:51:44,392 | INFO     | process IDs to be killed: [1844903] (in reverse order)
[2026-01-09 17:52:34] 2026-01-09 22:51:44,836 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:52:34] 2026-01-09 22:51:44,837 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:52:34] 2026-01-09 22:51:44,880 | INFO     | did not find any defunct processes belonging to 1844903
[2026-01-09 17:52:34] 2026-01-09 22:51:44,974 | INFO     | did not find any defunct processes belonging to 1844903
[2026-01-09 17:52:34] 2026-01-09 22:51:44,974 | INFO     | ready for new job
[2026-01-09 17:52:34] 2026-01-09 22:51:44,975 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:52:34] 2026-01-09 22:51:45,060 | INFO     | ***************************************
[2026-01-09 17:52:34] 2026-01-09 22:51:45,061 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:52:34] 2026-01-09 22:51:45,061 | INFO     | ***************************************
[2026-01-09 17:52:34] 2026-01-09 22:51:45,061 | INFO     | 
[2026-01-09 17:52:34] 2026-01-09 22:51:45,063 | INFO     | architecture information:
[2026-01-09 17:52:34] 2026-01-09 22:51:45,092 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:52:34] 2026-01-09 22:51:45,306 | INFO     | cat /etc/os-release:
[2026-01-09 17:52:34] NAME="CentOS Linux"
[2026-01-09 17:52:34] VERSION="7 (Core)"
[2026-01-09 17:52:34] ID="centos"
[2026-01-09 17:52:34] ID_LIKE="rhel fedora"
[2026-01-09 17:52:34] VERSION_ID="7"
[2026-01-09 17:52:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:52:34] ANSI_COLOR="0;31"
[2026-01-09 17:52:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:52:34] HOME_URL="https://www.centos.org/"
[2026-01-09 17:52:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:52:34] 
[2026-01-09 17:52:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:52:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:52:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:52:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:52:34] 
[2026-01-09 17:52:34] 2026-01-09 22:51:45,306 | INFO     | ***************************************
[2026-01-09 17:52:34] 2026-01-09 22:51:45,810 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 17:52:34] 2026-01-09 22:51:45,985 | INFO     | sufficient remaining disk space (53093597184 B)
[2026-01-09 17:52:34] 2026-01-09 22:51:45,985 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:52:34] 2026-01-09 22:51:45,986 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:52:34] 2026-01-09 22:51:45,986 | INFO     | update_server=False
[2026-01-09 17:52:34] 2026-01-09 22:51:45,986 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:52:34] 2026-01-09 22:51:46,179 | INFO     | all payload control threads have been joined
[2026-01-09 17:52:34] 2026-01-09 22:51:46,187 | INFO     | all job control threads have been joined
[2026-01-09 17:52:34] 2026-01-09 22:51:46,569 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:52:34] 2026-01-09 22:51:46,569 | INFO     | aborting loop
[2026-01-09 17:52:34] 2026-01-09 22:51:46,580 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:52:34] 2026-01-09 22:51:46,795 | INFO     | all data control threads have been joined
[2026-01-09 17:52:34] 2026-01-09 22:51:46,992 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:52:34] 2026-01-09 22:51:47,185 | INFO     | [payload] control thread has finished
[2026-01-09 17:52:34] 2026-01-09 22:51:47,193 | INFO     | [job] control thread has finished
[2026-01-09 17:52:34] 2026-01-09 22:51:47,355 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:52:34] 2026-01-09 22:51:47,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:52:34] 2026-01-09 22:51:47,553 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:52:34] 2026-01-09 22:51:47,575 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:52:34] 2026-01-09 22:51:47,804 | INFO     | [data] control thread has finished
[2026-01-09 17:52:34] 2026-01-09 22:51:47,922 | INFO     | [job] validate thread has finished
[2026-01-09 17:52:34] 2026-01-09 22:51:48,158 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:52:34] 2026-01-09 22:51:48,158 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:52:34] 2026-01-09 22:51:48,327 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:52:34] 2026-01-09 22:51:48,426 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:52:34] 2026-01-09 22:51:48,436 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:52:34] 2026-01-09 22:51:48,608 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:52:34] 2026-01-09 22:51:48,688 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:52:34] 2026-01-09 22:51:49,694 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:52:34] 2026-01-09 22:51:51,512 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:52:34] 2026-01-09 22:52:13,839 | INFO     | PID=1825575 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 17:52:34] 2026-01-09 22:52:13,840 | INFO     | .. there are 42 such processes running
[2026-01-09 17:52:34] 2026-01-09 22:52:13,857 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:52:34] 2026-01-09 22:52:13,857 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:52:34] 2026-01-09 22:52:13,857 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:52:34] 2026-01-09 22:52:24,059 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:52:34] 2026-01-09 22:52:24,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139772336793408)>', '<ExcThread(monitor, started 139771699513088)>']
[2026-01-09 17:52:34] 2026-01-09 22:52:25,114 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:52:34] 2026-01-09 22:52:25,119 | INFO     | [monitor] control thread has ended
[2026-01-09 17:52:34] 2026-01-09 22:52:29,696 | INFO     | all workflow threads have been joined
[2026-01-09 17:52:34] 2026-01-09 22:52:29,697 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:52:34] 2026-01-09 22:52:29,697 | INFO     | traces error code: 0
[2026-01-09 17:52:34] 2026-01-09 22:52:29,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:52:34] 2026-01-09 22:52:32,470 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:52:34] 2026-01-09 22:52:32,512 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:52:34] 2026-01-09 22:52:32,581 [wrapper] pilotpid: 1825575
[2026-01-09 17:52:34] 2026-01-09 22:52:32,621 [wrapper] Pilot exit status: 0
[2026-01-09 17:52:34] 2026-01-09 22:52:32,806 [wrapper] pandaids: 6963153565
[2026-01-09 17:52:34] 2026-01-09 22:52:34,161 [wrapper] cleanup supervisor_pilot 2730416 1825576
[2026-01-09 17:52:34] 2026-01-09 22:52:34,245 [wrapper] Test setup, not cleaning
[2026-01-09 17:52:34] 2026-01-09 22:52:34,305 [wrapper] apfmon messages muted
[2026-01-09 17:52:34] 2026-01-09 22:52:34,386 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:52:34] 2026-01-09 22:52:34,447 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:52:34]  *** Error codes and diagnostics ***
[2026-01-09 17:52:35]     "exeErrorCode": 0,
[2026-01-09 17:52:35]     "exeErrorDiag": "",
[2026-01-09 17:52:35]     "pilotErrorCode": 0,
[2026-01-09 17:52:35]     "pilotErrorDiag": "",
[2026-01-09 17:52:35]  *** Listing of results directory ***
[2026-01-09 17:52:35] total 452520
[2026-01-09 17:52:35] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-09 17:52:35] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 14:06 queuedata.json
[2026-01-09 17:52:35] -rwx------. 1 boincer umatlas     36322 Jan  8 14:06 runpilot2-wrapper.sh
[2026-01-09 17:52:35] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:52:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:19 run_atlas
[2026-01-09 17:52:35] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:19 job.xml
[2026-01-09 17:52:35] -rw-r--r--. 2 boincer umatlas 224930050 Jan  9 00:19 EVNT.47898824._001170.pool.root.1
[2026-01-09 17:52:35] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:19 start_atlas.sh
[2026-01-09 17:52:35] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:19 shared
[2026-01-09 17:52:35] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 00:19 input.tar.gz
[2026-01-09 17:52:35] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:19 boinc_lockfile
[2026-01-09 17:52:35] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 00:19 pandaJob.out
[2026-01-09 17:52:35] -rw-------. 1 boincer umatlas        57 Jan  9 00:19 setup.sh.local
[2026-01-09 17:52:35] -rw-------. 1 boincer umatlas    989771 Jan  9 00:21 agis_schedconf.cvmfs.json
[2026-01-09 17:52:35] drwx------. 5 boincer umatlas      4096 Jan  9 00:21 pilot3
[2026-01-09 17:52:35] -rw-------. 1 boincer umatlas 220430208 Jan  9 17:48 HITS.47898826._030238.pool.root.1
[2026-01-09 17:52:35] -rw-r--r--. 1 boincer umatlas      6524 Jan  9 17:48 init_data.xml
[2026-01-09 17:52:35] -rw-r--r--. 1 boincer umatlas       532 Jan  9 17:48 boinc_task_state.xml
[2026-01-09 17:52:35] -rw-------. 1 boincer umatlas      1042 Jan  9 17:50 memory_monitor_summary.json
[2026-01-09 17:52:35] -rw-------. 1 boincer umatlas   1516240 Jan  9 17:50 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:52:35] -rw-------. 1 boincer umatlas    990653 Jan  9 17:50 log.47898826._030238.job.log.tgz.1
[2026-01-09 17:52:35] -rw-------. 1 boincer umatlas      7821 Jan  9 17:51 heartbeat.json
[2026-01-09 17:52:35] -rw-------. 1 boincer umatlas        95 Jan  9 17:52 pilot_heartbeat.json
[2026-01-09 17:52:35] -rw-r--r--. 1 boincer umatlas        29 Jan  9 17:52 wrapper_checkpoint.txt
[2026-01-09 17:52:35] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 17:52 boinc_mmap_file
[2026-01-09 17:52:35] -rw-------. 1 boincer umatlas      4824 Jan  9 17:52 pilotlog.txt
[2026-01-09 17:52:35] -rw-------. 1 boincer umatlas   6061835 Jan  9 17:52 log.47898826._030238.job.log.1
[2026-01-09 17:52:35] -rw-------. 1 boincer umatlas       357 Jan  9 17:52 output.list
[2026-01-09 17:52:35] -rw-r--r--. 1 boincer umatlas       620 Jan  9 17:52 runtime_log
[2026-01-09 17:52:35] -rw-------. 1 boincer umatlas   7075840 Jan  9 17:52 result.tar.gz
[2026-01-09 17:52:35] -rw-r--r--. 1 boincer umatlas      9340 Jan  9 17:52 runtime_log.err
[2026-01-09 17:52:35] -rw-------. 1 boincer umatlas       659 Jan  9 17:52 FZ6NDm7VAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmb9kKDm0giyYm.diag
[2026-01-09 17:52:35] -rw-r--r--. 1 boincer umatlas     21267 Jan  9 17:52 stderr.txt
[2026-01-09 17:52:35] HITS file was successfully produced:
[2026-01-09 17:52:35] -rw-------. 1 boincer umatlas 220430208 Jan  9 17:48 shared/HITS.pool.root.1
[2026-01-09 17:52:35]  *** Contents of shared directory: ***
[2026-01-09 17:52:35] total 442436
[2026-01-09 17:52:35] -rw-r--r--. 2 boincer umatlas 224930050 Jan  9 00:19 ATLAS.root_0
[2026-01-09 17:52:35] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:19 start_atlas.sh
[2026-01-09 17:52:35] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 00:19 input.tar.gz
[2026-01-09 17:52:35] -rw-------. 1 boincer umatlas 220430208 Jan  9 17:48 HITS.pool.root.1
[2026-01-09 17:52:35] -rw-------. 1 boincer umatlas   7075840 Jan  9 17:52 result.tar.gz
17:52:36 (1811505): run_atlas exited; CPU time 115446.953383
17:52:36 (1811505): called boinc_finish(0)

</stderr_txt>
]]>

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