Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:19:30 (323612): wrapper (7.7.26015): starting
00:19:30 (323612): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:19:30] Arguments: --nthreads 8
[2026-01-09 00:19:30] Threads: 8
[2026-01-09 00:19:30] Checking for CVMFS
[2026-01-09 00:19:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:19:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:19:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:19:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:19:32] 2.13.3.0 13122 92983 358264 154933 0 68 23093932 32935937 18590 16776704 0 353610366 99.518 459814260 35975 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:19:32] CVMFS is ok
[2026-01-09 00:19:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:19:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:19:32] Further information can be found at the LHC@home message board.
[2026-01-09 00:19:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:19:32] Checking for apptainer binary...
[2026-01-09 00:19:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:19:32] Running /usr/bin/apptainer --version
[2026-01-09 00:19:33] apptainer version 1.4.5-2.el9
[2026-01-09 00:19:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:19:33] c6-8-25-2.aglt2.org
[2026-01-09 00:19:33] apptainer works
[2026-01-09 00:19:33] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:19:33] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:19:33] Starting ATLAS job with PandaID=6963153555
[2026-01-09 00:19:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:26:39]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:26:39] 2026-01-09 11:16:27,540 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 10:26:39] 2026-01-09 11:16:27,639 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2650.7993437499995
[2026-01-09 10:26:39] 2026-01-09 11:16:27,735 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6963153555/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 10:26:39] 2026-01-09 11:16:27,736 | INFO     | extracted standard info from prmon json
[2026-01-09 10:26:39] 2026-01-09 11:16:27,736 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:26:39] 2026-01-09 11:16:27,736 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:26:39] 2026-01-09 11:16:27,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:26:39] 2026-01-09 11:16:27,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:26:39] 2026-01-09 11:16:27,783 | INFO     | fitting pss+swap vs Time
[2026-01-09 10:26:39] 2026-01-09 11:16:27,784 | INFO     | sum of square deviations: 12955619645.561974
[2026-01-09 10:26:39] 2026-01-09 11:16:27,807 | INFO     | sum of deviations: 124224472057.96826
[2026-01-09 10:26:39] 2026-01-09 11:16:27,807 | INFO     | mean x: 1767946774.1815562
[2026-01-09 10:26:39] 2026-01-09 11:16:27,807 | INFO     | mean y: 2450372.65129683
[2026-01-09 10:26:39] 2026-01-09 11:16:27,808 | INFO     | intersect: -16949440826.510668
[2026-01-09 10:26:39] 2026-01-09 11:16:27,808 | INFO     | chi2: 6.432999228045312
[2026-01-09 10:26:39] 2026-01-09 11:16:27,809 | INFO     | sum of square deviations: 12403619207.894768
[2026-01-09 10:26:39] 2026-01-09 11:16:27,832 | INFO     | sum of deviations: 187357015637.89453
[2026-01-09 10:26:39] 2026-01-09 11:16:27,832 | INFO     | mean x: 1767946621.6842105
[2026-01-09 10:26:39] 2026-01-09 11:16:27,832 | INFO     | mean y: 2467707.9619883043
[2026-01-09 10:26:39] 2026-01-09 11:16:27,832 | INFO     | intersect: -26702415543.776554
[2026-01-09 10:26:39] 2026-01-09 11:16:27,833 | INFO     | chi2: 4.360034975208244
[2026-01-09 10:26:39] 2026-01-09 11:16:27,833 | INFO     | current chi2=4.360034975208244 (change=32.22391577166325 %)
[2026-01-09 10:26:39] 2026-01-09 11:16:27,833 | INFO     | sum of square deviations: 11867526045.222666
[2026-01-09 10:26:39] 2026-01-09 11:16:27,859 | INFO     | sum of deviations: 184614878507.7032
[2026-01-09 10:26:39] 2026-01-09 11:16:27,860 | INFO     | mean x: 1767946469.1869435
[2026-01-09 10:26:39] 2026-01-09 11:16:27,860 | INFO     | mean y: 2466927.75074184
[2026-01-09 10:26:39] 2026-01-09 11:16:27,860 | INFO     | intersect: -27500251109.127728
[2026-01-09 10:26:39] 2026-01-09 11:16:27,860 | INFO     | chi2: 4.3599971097495045
[2026-01-09 10:26:39] 2026-01-09 11:16:27,869 | INFO     | current chi2=4.3599971097495045 (change=0.0008684668575938438 %)
[2026-01-09 10:26:39] 2026-01-09 11:16:27,869 | INFO     | right removable region: 336
[2026-01-09 10:26:39] 2026-01-09 11:16:27,869 | INFO     | sum of square deviations: 12403580777.894762
[2026-01-09 10:26:39] 2026-01-09 11:16:27,872 | INFO     | sum of deviations: 19250892019.421032
[2026-01-09 10:26:39] 2026-01-09 11:16:27,880 | INFO     | mean x: 1767946926.6842105
[2026-01-09 10:26:39] 2026-01-09 11:16:27,880 | INFO     | mean y: 2479334.374269006
[2026-01-09 10:26:39] 2026-01-09 11:16:27,881 | INFO     | intersect: -2741450502.5902495
[2026-01-09 10:26:39] 2026-01-09 11:16:27,881 | INFO     | chi2: 2.9780242318341013
[2026-01-09 10:26:39] 2026-01-09 11:16:27,881 | INFO     | current chi2=2.9780242318341013 (change=53.707063746392144 %)
[2026-01-09 10:26:39] 2026-01-09 11:16:27,882 | INFO     | sum of square deviations: 11867470168.593409
[2026-01-09 10:26:39] 2026-01-09 11:16:27,887 | INFO     | sum of deviations: -24424869314.57865
[2026-01-09 10:26:39] 2026-01-09 11:16:27,888 | INFO     | mean x: 1767947079.1839762
[2026-01-09 10:26:39] 2026-01-09 11:16:27,888 | INFO     | mean y: 2491729.6706231455
[2026-01-09 10:26:39] 2026-01-09 11:16:27,888 | INFO     | intersect: 3641167517.408271
[2026-01-09 10:26:39] 2026-01-09 11:16:27,888 | INFO     | chi2: 2.359631688601644
[2026-01-09 10:26:39] 2026-01-09 11:16:27,888 | INFO     | current chi2=2.359631688601644 (change=20.765195145897202 %)
[2026-01-09 10:26:39] 2026-01-09 11:16:27,889 | INFO     | left removable region: 20
[2026-01-09 10:26:39] 2026-01-09 11:16:27,889 | INFO     | sum of square deviations: 9784380859.075893
[2026-01-09 10:26:39] 2026-01-09 11:16:27,891 | INFO     | sum of deviations: 3408808845.2151904
[2026-01-09 10:26:39] 2026-01-09 11:16:27,892 | INFO     | mean x: 1767947048.677215
[2026-01-09 10:26:39] 2026-01-09 11:16:27,892 | INFO     | mean y: 2521098.335443038
[2026-01-09 10:26:39] 2026-01-09 11:16:27,892 | INFO     | intersect: -613419105.1586568
[2026-01-09 10:26:39] 2026-01-09 11:16:27,892 | INFO     | chi2: 0.009544788944649735
[2026-01-09 10:26:39] 2026-01-09 11:16:27,896 | INFO     | current memory leak: 0.35 B/s (using 316 data points, chi2=0.01)
[2026-01-09 10:26:39] 2026-01-09 11:16:27,896 | INFO     | could have reported an average CPU frequency of 2651 MHz (15 samples)
[2026-01-09 10:26:39] 2026-01-09 11:16:27,896 | INFO     | ..............................
[2026-01-09 10:26:39] 2026-01-09 11:16:27,898 | INFO     | . Timing measurements:
[2026-01-09 10:26:39] 2026-01-09 11:16:27,898 | INFO     | . get job = 0 s
[2026-01-09 10:26:39] 2026-01-09 11:16:27,898 | INFO     | . initial setup = 7 s
[2026-01-09 10:26:39] 2026-01-09 11:16:27,898 | INFO     | . payload setup = 52 s
[2026-01-09 10:26:39] 2026-01-09 11:16:27,898 | INFO     | . stage-in = 0 s
[2026-01-09 10:26:39] 2026-01-09 11:16:27,898 | INFO     | . payload execution = 21157 s
[2026-01-09 10:26:39] 2026-01-09 11:16:27,898 | INFO     | . stage-out = 7 s
[2026-01-09 10:26:39] 2026-01-09 11:16:27,899 | INFO     | . log creation = 1 s
[2026-01-09 10:26:39] 2026-01-09 11:16:27,899 | INFO     | ..............................
[2026-01-09 10:26:39] 2026-01-09 11:16:28,951 | INFO     | 
[2026-01-09 10:26:39] 2026-01-09 11:16:28,952 | INFO     | job summary report
[2026-01-09 10:26:39] 2026-01-09 11:16:28,952 | INFO     | --------------------------------------------------
[2026-01-09 10:26:39] 2026-01-09 11:16:28,952 | INFO     | PanDA job id: 6963153555
[2026-01-09 10:26:39] 2026-01-09 11:16:28,952 | INFO     | task id: 47898826
[2026-01-09 10:26:39] 2026-01-09 11:16:28,952 | INFO     | errors: (none)
[2026-01-09 10:26:39] 2026-01-09 11:16:28,952 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:26:39] 2026-01-09 11:16:28,952 | INFO     | pilot state: finished 
[2026-01-09 10:26:39] 2026-01-09 11:16:28,952 | INFO     | transexitcode: 0
[2026-01-09 10:26:39] 2026-01-09 11:16:28,952 | INFO     | exeerrorcode: 0
[2026-01-09 10:26:39] 2026-01-09 11:16:28,952 | INFO     | exeerrordiag: 
[2026-01-09 10:26:39] 2026-01-09 11:16:28,952 | INFO     | exitcode: 0
[2026-01-09 10:26:39] 2026-01-09 11:16:28,952 | INFO     | exitmsg: OK
[2026-01-09 10:26:39] 2026-01-09 11:16:28,952 | INFO     | cpuconsumptiontime: 60103 s
[2026-01-09 10:26:39] 2026-01-09 11:16:28,953 | INFO     | nevents: 400
[2026-01-09 10:26:39] 2026-01-09 11:16:28,953 | INFO     | neventsw: 0
[2026-01-09 10:26:39] 2026-01-09 11:16:28,953 | INFO     | pid: 383056
[2026-01-09 10:26:39] 2026-01-09 11:16:28,953 | INFO     | pgrp: 383056
[2026-01-09 10:26:39] 2026-01-09 11:16:28,953 | INFO     | corecount: 8
[2026-01-09 10:26:39] 2026-01-09 11:16:28,953 | INFO     | event service: False
[2026-01-09 10:26:39] 2026-01-09 11:16:28,953 | INFO     | sizes: {0: 2283744, 1: 2283828, 2: 2283999, 3: 2284027, 4: 2284055, 15: 2284083, 27: 2284239, 35: 2284529, 38: 2284557, 21215: 2317969, 21216: 2317968, 21226: 2327
[2026-01-09 10:26:39] 2026-01-09 11:16:28,953 | INFO     | --------------------------------------------------
[2026-01-09 10:26:39] 2026-01-09 11:16:28,953 | INFO     | 
[2026-01-09 10:26:39] 2026-01-09 11:16:28,953 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-01-09 10:26:39] 2026-01-09 11:16:29,077 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,077 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,077 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,077 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,078 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,078 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,078 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,078 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,078 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,078 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,078 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,078 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,078 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,078 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,078 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:26:39] 2026-01-09 11:16:29,079 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,079 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:26:39] 2026-01-09 11:16:29,079 | INFO     | job 6963153555 has completed (purged errors)
[2026-01-09 10:26:39] 2026-01-09 11:16:29,079 | INFO     | overall cleanup function is called
[2026-01-09 10:26:39] 2026-01-09 11:16:30,211 | INFO     | --- collectZombieJob: --- 10, [383056]
[2026-01-09 10:26:39] 2026-01-09 11:16:30,212 | INFO     | zombie collector waiting for pid 383056
[2026-01-09 10:26:39] 2026-01-09 11:16:30,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:26:39] 2026-01-09 11:16:30,212 | INFO     | collected zombie processes
[2026-01-09 10:26:39] 2026-01-09 11:16:30,212 | INFO     | will attempt to kill all subprocesses of pid=383056
[2026-01-09 10:26:39] 2026-01-09 11:16:34,460 | INFO     | PID=342080 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 10:26:39] 2026-01-09 11:16:34,460 | INFO     | .. there are 18 such processes running
[2026-01-09 10:26:39] 2026-01-09 11:16:34,601 | INFO     | process IDs to be killed: [383056] (in reverse order)
[2026-01-09 10:26:39] 2026-01-09 11:16:34,936 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:26:39] 2026-01-09 11:16:34,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:26:39] 2026-01-09 11:16:34,972 | INFO     | did not find any defunct processes belonging to 383056
[2026-01-09 10:26:39] 2026-01-09 11:16:34,997 | INFO     | did not find any defunct processes belonging to 383056
[2026-01-09 10:26:39] 2026-01-09 11:16:34,997 | INFO     | ready for new job
[2026-01-09 10:26:39] 2026-01-09 11:16:34,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:26:39] 2026-01-09 11:16:35,003 | INFO     | ***************************************
[2026-01-09 10:26:39] 2026-01-09 11:16:35,003 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:26:39] 2026-01-09 11:16:35,003 | INFO     | ***************************************
[2026-01-09 10:26:39] 2026-01-09 11:16:35,003 | INFO     | 
[2026-01-09 10:26:39] 2026-01-09 11:16:35,019 | INFO     | architecture information:
[2026-01-09 10:26:39] 2026-01-09 11:16:35,020 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:26:39] 2026-01-09 11:16:35,103 | INFO     | cat /etc/os-release:
[2026-01-09 10:26:39] NAME="CentOS Linux"
[2026-01-09 10:26:39] VERSION="7 (Core)"
[2026-01-09 10:26:39] ID="centos"
[2026-01-09 10:26:39] ID_LIKE="rhel fedora"
[2026-01-09 10:26:39] VERSION_ID="7"
[2026-01-09 10:26:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:26:39] ANSI_COLOR="0;31"
[2026-01-09 10:26:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:26:39] HOME_URL="https://www.centos.org/"
[2026-01-09 10:26:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:26:39] 
[2026-01-09 10:26:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:26:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:26:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:26:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:26:39] 
[2026-01-09 10:26:39] 2026-01-09 11:16:35,103 | INFO     | ***************************************
[2026-01-09 10:26:39] 2026-01-09 11:16:35,607 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-01-09 10:26:39] 2026-01-09 11:16:35,711 | INFO     | sufficient remaining disk space (73624715264 B)
[2026-01-09 10:26:39] 2026-01-09 11:16:35,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:26:39] 2026-01-09 11:16:35,711 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:26:39] 2026-01-09 11:16:35,711 | INFO     | update_server=False
[2026-01-09 10:26:39] 2026-01-09 11:16:35,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:26:39] 2026-01-09 11:16:35,712 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:26:39] 2026-01-09 11:16:35,787 | INFO     | all data control threads have been joined
[2026-01-09 10:26:39] 2026-01-09 11:16:36,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:26:39] 2026-01-09 11:16:36,068 | INFO     | aborting loop
[2026-01-09 10:26:39] 2026-01-09 11:16:36,154 | INFO     | all job control threads have been joined
[2026-01-09 10:26:39] 2026-01-09 11:16:36,738 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:26:39] 2026-01-09 11:16:36,794 | INFO     | [data] control thread has finished
[2026-01-09 10:26:39] 2026-01-09 11:16:36,834 | INFO     | all payload control threads have been joined
[2026-01-09 10:26:39] 2026-01-09 11:16:36,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:26:39] 2026-01-09 11:16:36,998 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:26:39] 2026-01-09 11:16:37,092 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:26:39] 2026-01-09 11:16:37,155 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:26:39] 2026-01-09 11:16:37,178 | INFO     | [job] control thread has finished
[2026-01-09 10:26:39] 2026-01-09 11:16:37,193 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:26:39] 2026-01-09 11:16:37,248 | INFO     | [job] validate thread has finished
[2026-01-09 10:26:39] 2026-01-09 11:16:37,249 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:26:39] 2026-01-09 11:16:37,265 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:26:39] 2026-01-09 11:16:37,266 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:26:39] 2026-01-09 11:16:37,743 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:26:39] 2026-01-09 11:16:37,840 | INFO     | [payload] control thread has finished
[2026-01-09 10:26:39] 2026-01-09 11:16:38,062 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:26:39] 2026-01-09 11:16:38,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:26:39] 2026-01-09 11:16:39,128 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:26:39] 2026-01-09 11:16:40,883 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:26:39] 2026-01-09 11:17:15,913 | INFO     | PID=342080 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 10:26:39] 2026-01-09 11:17:15,914 | INFO     | .. there are 18 such processes running
[2026-01-09 10:26:39] 2026-01-09 11:17:15,914 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:26:39] 2026-01-09 11:17:15,914 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:26:39] 2026-01-09 11:17:15,914 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:26:39] 2026-01-09 11:17:32,662 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:26:39] 2026-01-09 11:17:34,750 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139757790058304)>', '<ExcThread(monitor, started 139757019457280)>']
[2026-01-09 10:26:39] 2026-01-09 11:17:35,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:26:39] 2026-01-09 11:17:35,071 | INFO     | [monitor] control thread has ended
[2026-01-09 10:26:39] 2026-01-09 11:17:39,814 | INFO     | all workflow threads have been joined
[2026-01-09 10:26:39] 2026-01-09 11:17:39,815 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:26:39] 2026-01-09 11:17:39,815 | INFO     | traces error code: 0
[2026-01-09 10:26:39] 2026-01-09 11:17:39,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:26:39] 2026-01-09 11:17:42,316 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:26:39] 2026-01-09 11:17:42,335 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:26:39] 2026-01-09 11:17:42,355 [wrapper] pilotpid: 342080
[2026-01-09 10:26:39] 2026-01-09 11:17:42,411 [wrapper] Pilot exit status: 0
[2026-01-09 10:26:39] 2026-01-09 11:17:42,531 [wrapper] pandaids: 6963153555
[2026-01-09 10:26:39] 2026-01-09 11:17:43,004 [wrapper] cleanup supervisor_pilot 1264955 342081
[2026-01-09 10:26:39] 2026-01-09 11:17:43,024 [wrapper] Test setup, not cleaning
[2026-01-09 10:26:39] 2026-01-09 11:17:43,026 [wrapper] apfmon messages muted
[2026-01-09 10:26:39] 2026-01-09 11:17:43,029 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:26:39] 2026-01-09 11:17:43,041 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:26:39]  *** Error codes and diagnostics ***
[2026-01-09 10:26:39]     "exeErrorCode": 0,
[2026-01-09 10:26:39]     "exeErrorDiag": "",
[2026-01-09 10:26:39]     "pilotErrorCode": 0,
[2026-01-09 10:26:39]     "pilotErrorDiag": "",
[2026-01-09 10:26:39]  *** Listing of results directory ***
[2026-01-09 10:26:39] total 442936
[2026-01-09 10:26:39] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-09 10:26:39] -rwx------. 1 boincer umatlas     36322 Jan  8 14:06 runpilot2-wrapper.sh
[2026-01-09 10:26:39] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 14:06 queuedata.json
[2026-01-09 10:26:39] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:26:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:19 run_atlas
[2026-01-09 10:26:39] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:19 job.xml
[2026-01-09 10:26:39] -rw-r--r--. 2 boincer umatlas 224930050 Jan  9 00:19 EVNT.47898824._001170.pool.root.1
[2026-01-09 10:26:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:19 start_atlas.sh
[2026-01-09 10:26:39] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:19 shared
[2026-01-09 10:26:39] -rw-r--r--. 2 boincer umatlas    592389 Jan  9 00:19 input.tar.gz
[2026-01-09 10:26:39] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:19 boinc_lockfile
[2026-01-09 10:26:39] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 00:19 pandaJob.out
[2026-01-09 10:26:39] -rw-------. 1 boincer umatlas        57 Jan  9 00:19 setup.sh.local
[2026-01-09 10:26:39] -rw-------. 1 boincer umatlas    989771 Jan  9 00:20 agis_schedconf.cvmfs.json
[2026-01-09 10:26:39] drwx------. 5 boincer umatlas      4096 Jan  9 00:20 pilot3
[2026-01-09 10:26:39] -rw-------. 1 boincer umatlas 218696044 Jan  9 06:12 HITS.47898826._030228.pool.root.1
[2026-01-09 10:26:39] -rw-r--r--. 1 boincer umatlas       529 Jan  9 06:12 boinc_task_state.xml
[2026-01-09 10:26:39] -rw-------. 1 boincer umatlas      1040 Jan  9 06:15 memory_monitor_summary.json
[2026-01-09 10:26:39] -rw-------. 1 boincer umatlas   1516240 Jan  9 06:15 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:26:39] -rw-------. 1 boincer umatlas    522356 Jan  9 06:15 log.47898826._030228.job.log.tgz.1
[2026-01-09 10:26:39] -rw-------. 1 boincer umatlas      7824 Jan  9 06:16 heartbeat.json
[2026-01-09 10:26:39] -rw-------. 1 boincer umatlas        95 Jan  9 06:16 pilot_heartbeat.json
[2026-01-09 10:26:39] -rw-------. 1 boincer umatlas      4823 Jan  9 06:17 pilotlog.txt
[2026-01-09 10:26:39] -rw-------. 1 boincer umatlas   2488755 Jan  9 06:17 log.47898826._030228.job.log.1
[2026-01-09 10:26:39] -rw-------. 1 boincer umatlas       357 Jan  9 06:17 output.list
[2026-01-09 10:26:39] -rw-r--r--. 1 boincer umatlas       620 Jan  9 06:17 runtime_log
[2026-01-09 10:26:39] -rw-------. 1 boincer umatlas   3031040 Jan  9 06:17 result.tar.gz
[2026-01-09 10:26:39] -rw-r--r--. 1 boincer umatlas      9348 Jan  9 06:17 runtime_log.err
[2026-01-09 10:26:39] -rw-------. 1 boincer umatlas       656 Jan  9 06:17 9eaKDmwVAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmV9kKDmj5DuBn.diag
[2026-01-09 10:26:39] -rw-r--r--. 1 boincer umatlas      6874 Jan  9 10:20 init_data.xml
[2026-01-09 10:26:39] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 10:26 boinc_mmap_file
[2026-01-09 10:26:39] -rw-r--r--. 1 boincer umatlas        27 Jan  9 10:26 wrapper_checkpoint.txt
[2026-01-09 10:26:39] -rw-r--r--. 1 boincer umatlas     21303 Jan  9 10:26 stderr.txt
[2026-01-09 10:26:39] HITS file was successfully produced:
[2026-01-09 10:26:39] -rw-------. 1 boincer umatlas 218696044 Jan  9 06:12 shared/HITS.pool.root.1
[2026-01-09 10:26:39]  *** Contents of shared directory: ***
[2026-01-09 10:26:39] total 436796
[2026-01-09 10:26:39] -rw-r--r--. 2 boincer umatlas 224930050 Jan  9 00:19 ATLAS.root_0
[2026-01-09 10:26:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:19 start_atlas.sh
[2026-01-09 10:26:39] -rw-r--r--. 2 boincer umatlas    592389 Jan  9 00:19 input.tar.gz
[2026-01-09 10:26:39] -rw-------. 1 boincer umatlas 218696044 Jan  9 06:12 HITS.pool.root.1
[2026-01-09 10:26:39] -rw-------. 1 boincer umatlas   3031040 Jan  9 06:17 result.tar.gz
10:27:02 (323612): run_atlas exited; CPU time 60925.303066
10:27:02 (323612): called boinc_finish(0)

</stderr_txt>
]]>

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