Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:26:16 (17466): wrapper (7.7.26015): starting
00:26:16 (17466): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:26:16] Arguments: --nthreads 12
[2026-01-09 00:26:16] Threads: 12
[2026-01-09 00:26:16] Checking for CVMFS
[2026-01-09 00:26:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:26:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:26:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:26:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:26:17] 2.11.2.0 3165 136240 94956 154933 0 56 19116485 20275201 1 130560 0 50270114 99.887 8104898 40734 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:26:17] CVMFS is ok
[2026-01-09 00:26:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:26:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:26:17] Further information can be found at the LHC@home message board.
[2026-01-09 00:26:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:26:17] Checking for apptainer binary...
[2026-01-09 00:26:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:26:17] Running /usr/bin/apptainer --version
[2026-01-09 00:26:17] apptainer version 1.3.2-1.el7
[2026-01-09 00:26:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:26:18] c-115-40.aglt2.org
[2026-01-09 00:26:18] apptainer works
[2026-01-09 00:26:18] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:26:18] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:26:18] Starting ATLAS job with PandaID=6963155273
[2026-01-09 00:26:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 02:02:48]  *** The last 200 lines of the pilot log: ***
[2026-01-09 02:02:48]  lfn=log.47898826._030523.job.log.tgz.1
[2026-01-09 02:02:48]  mtime=0
[2026-01-09 02:02:48]  protocol_id=None
[2026-01-09 02:02:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 02:02:48]  replicas=None
[2026-01-09 02:02:48]  scope=mc23_13p6TeV
[2026-01-09 02:02:48]  status=None
[2026-01-09 02:02:48]  status_code=0
[2026-01-09 02:02:48]  storage_token=
[2026-01-09 02:02:48]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963155273/log.47898826._030523.job.log.tgz.1
[2026-01-09 02:02:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/5e/log.47898826._030523.job.log.tgz.1
[2026-01-09 02:02:48]  workdir=None
[2026-01-09 02:02:48] ]
[2026-01-09 02:02:48] 2026-01-09 07:01:49,804 | INFO     | time since job start (5716s) is within the limit (349056.0s)
[2026-01-09 02:02:48] 2026-01-09 07:01:49,804 | INFO     | 5719s have passed since pilot start - server update state is 'RUNNING'
[2026-01-09 02:02:48] 2026-01-09 07:01:49,819 | INFO     | transferring file log.47898826._030523.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963155273/log.47898826._030523.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 02:02:48] 2026-01-09 07:01:49,820 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963155273/log.47898826._030523.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._030523.job
[2026-01-09 02:02:48] 2026-01-09 07:01:49,841 | INFO     | adding to output.list: log.47898826._030523.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/5e/log.47898826._030523.job.log.tg
[2026-01-09 02:02:48] 2026-01-09 07:01:49,842 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 02:02:48] 2026-01-09 07:01:49,842 | INFO     | summary of transferred files:
[2026-01-09 02:02:48] 2026-01-09 07:01:49,842 | INFO     |  -- lfn=log.47898826._030523.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 02:02:48] 2026-01-09 07:01:49,843 | INFO     | stage-out finished correctly
[2026-01-09 02:02:48] 2026-01-09 07:01:49,919 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 02:02:48] 2026-01-09 07:01:50,830 | INFO     | job 6963155273 has state=finished
[2026-01-09 02:02:48] 2026-01-09 07:01:50,831 | INFO     | preparing for final server update for job 6963155273 in state='finished'
[2026-01-09 02:02:48] 2026-01-09 07:01:50,831 | INFO     | this job has now completed (state=finished)
[2026-01-09 02:02:48] 2026-01-09 07:01:50,831 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 02:02:48] 2026-01-09 07:01:50,832 | INFO     | log transfer has been attempted: DONE
[2026-01-09 02:02:48] 2026-01-09 07:01:50,832 | INFO     | job 6963155273 has finished - writing final server update
[2026-01-09 02:02:48] 2026-01-09 07:01:50,832 | INFO     | total number of processed events: 400 (read)
[2026-01-09 02:02:48] 2026-01-09 07:01:50,833 | INFO     | executing command: lscpu
[2026-01-09 02:02:48] 2026-01-09 07:01:50,857 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 02:02:48] 2026-01-09 07:01:51,046 | INFO     | monitor loop #427: job 0:6963155273 is in state 'finished'
[2026-01-09 02:02:48] 2026-01-09 07:01:51,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:02:48] 2026-01-09 07:01:51,810 | INFO     | time since job start (5718s) is within the limit (349056.0s)
[2026-01-09 02:02:48] 2026-01-09 07:01:53,550 | INFO     | monitor loop #428: job 0:6963155273 is in state 'finished'
[2026-01-09 02:02:48] 2026-01-09 07:01:53,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:02:48] 2026-01-09 07:01:53,816 | INFO     | time since job start (5720s) is within the limit (349056.0s)
[2026-01-09 02:02:48] 2026-01-09 07:01:55,383 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 02:02:48] 2026-01-09 07:01:55,386 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2026-01-09 02:02:48] 2026-01-09 07:01:55,389 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963155273/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 02:02:48] 2026-01-09 07:01:55,390 | INFO     | extracted standard info from prmon json
[2026-01-09 02:02:48] 2026-01-09 07:01:55,390 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 02:02:48] 2026-01-09 07:01:55,390 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 02:02:48] 2026-01-09 07:01:55,391 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 02:02:48] 2026-01-09 07:01:55,391 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 02:02:48] 2026-01-09 07:01:55,393 | INFO     | fitting pss+swap vs Time
[2026-01-09 02:02:48] 2026-01-09 07:01:55,394 | INFO     | sum of square deviations: 204163828.0
[2026-01-09 02:02:48] 2026-01-09 07:01:55,394 | INFO     | sum of deviations: -9382573175.0
[2026-01-09 02:02:48] 2026-01-09 07:01:55,394 | INFO     | mean x: 1767939349.0
[2026-01-09 02:02:48] 2026-01-09 07:01:55,394 | INFO     | mean y: 2805634.942528736
[2026-01-09 02:02:48] 2026-01-09 07:01:55,394 | INFO     | intersect: 81250402104.15823
[2026-01-09 02:02:48] 2026-01-09 07:01:55,394 | INFO     | chi2: 0.19981113204630796
[2026-01-09 02:02:48] 2026-01-09 07:01:55,395 | INFO     | current memory leak: -45.96 B/s (using 87 data points, chi2=0.20)
[2026-01-09 02:02:48] 2026-01-09 07:01:55,395 | INFO     | could have reported an average CPU frequency of 2255 MHz (7 samples)
[2026-01-09 02:02:48] 2026-01-09 07:01:55,395 | INFO     | ..............................
[2026-01-09 02:02:48] 2026-01-09 07:01:55,395 | INFO     | . Timing measurements:
[2026-01-09 02:02:48] 2026-01-09 07:01:55,395 | INFO     | . get job = 0 s
[2026-01-09 02:02:48] 2026-01-09 07:01:55,395 | INFO     | . initial setup = 2 s
[2026-01-09 02:02:48] 2026-01-09 07:01:55,395 | INFO     | . payload setup = 6 s
[2026-01-09 02:02:48] 2026-01-09 07:01:55,395 | INFO     | . stage-in = 0 s
[2026-01-09 02:02:48] 2026-01-09 07:01:55,396 | INFO     | . payload execution = 5688 s
[2026-01-09 02:02:48] 2026-01-09 07:01:55,396 | INFO     | . stage-out = 0 s
[2026-01-09 02:02:48] 2026-01-09 07:01:55,396 | INFO     | . log creation = 0 s
[2026-01-09 02:02:48] 2026-01-09 07:01:55,396 | INFO     | ..............................
[2026-01-09 02:02:48] 2026-01-09 07:01:55,652 | INFO     | 
[2026-01-09 02:02:48] 2026-01-09 07:01:55,653 | INFO     | job summary report
[2026-01-09 02:02:48] 2026-01-09 07:01:55,653 | INFO     | --------------------------------------------------
[2026-01-09 02:02:48] 2026-01-09 07:01:55,653 | INFO     | PanDA job id: 6963155273
[2026-01-09 02:02:48] 2026-01-09 07:01:55,653 | INFO     | task id: 47898826
[2026-01-09 02:02:48] 2026-01-09 07:01:55,653 | INFO     | errors: (none)
[2026-01-09 02:02:48] 2026-01-09 07:01:55,653 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 02:02:48] 2026-01-09 07:01:55,654 | INFO     | pilot state: finished 
[2026-01-09 02:02:48] 2026-01-09 07:01:55,654 | INFO     | transexitcode: 0
[2026-01-09 02:02:48] 2026-01-09 07:01:55,654 | INFO     | exeerrorcode: 0
[2026-01-09 02:02:48] 2026-01-09 07:01:55,654 | INFO     | exeerrordiag: 
[2026-01-09 02:02:48] 2026-01-09 07:01:55,654 | INFO     | exitcode: 0
[2026-01-09 02:02:48] 2026-01-09 07:01:55,654 | INFO     | exitmsg: OK
[2026-01-09 02:02:48] 2026-01-09 07:01:55,654 | INFO     | cpuconsumptiontime: 60805 s
[2026-01-09 02:02:48] 2026-01-09 07:01:55,655 | INFO     | nevents: 400
[2026-01-09 02:02:48] 2026-01-09 07:01:55,655 | INFO     | neventsw: 0
[2026-01-09 02:02:48] 2026-01-09 07:01:55,655 | INFO     | pid: 27528
[2026-01-09 02:02:48] 2026-01-09 07:01:55,655 | INFO     | pgrp: 27528
[2026-01-09 02:02:48] 2026-01-09 07:01:55,655 | INFO     | corecount: 12
[2026-01-09 02:02:48] 2026-01-09 07:01:55,655 | INFO     | event service: False
[2026-01-09 02:02:48] 2026-01-09 07:01:55,655 | INFO     | sizes: {0: 2283970, 5: 2284232, 11: 2284288, 5699: 2310928, 5701: 2319982, 5707: 2320120}
[2026-01-09 02:02:48] 2026-01-09 07:01:55,656 | INFO     | --------------------------------------------------
[2026-01-09 02:02:48] 2026-01-09 07:01:55,656 | INFO     | 
[2026-01-09 02:02:48] 2026-01-09 07:01:55,656 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 02:02:48] 2026-01-09 07:01:55,680 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,680 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,680 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,680 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,681 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,681 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,681 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,681 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,681 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,682 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,682 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,682 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,683 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,683 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 02:02:48] 2026-01-09 07:01:55,683 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,683 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 02:02:48] 2026-01-09 07:01:55,683 | INFO     | job 6963155273 has completed (purged errors)
[2026-01-09 02:02:48] 2026-01-09 07:01:55,683 | INFO     | overall cleanup function is called
[2026-01-09 02:02:48] 2026-01-09 07:01:56,687 | INFO     | --- collectZombieJob: --- 10, [27528]
[2026-01-09 02:02:48] 2026-01-09 07:01:56,687 | INFO     | zombie collector waiting for pid 27528
[2026-01-09 02:02:48] 2026-01-09 07:01:56,687 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 02:02:48] 2026-01-09 07:01:56,688 | INFO     | collected zombie processes
[2026-01-09 02:02:48] 2026-01-09 07:01:56,688 | INFO     | will attempt to kill all subprocesses of pid=27528
[2026-01-09 02:02:48] 2026-01-09 07:01:56,774 | INFO     | process IDs to be killed: [27528] (in reverse order)
[2026-01-09 02:02:48] 2026-01-09 07:01:56,824 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 02:02:48] 2026-01-09 07:01:56,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 02:02:48] 2026-01-09 07:01:56,828 | INFO     | did not find any defunct processes belonging to 27528
[2026-01-09 02:02:48] 2026-01-09 07:01:56,832 | INFO     | did not find any defunct processes belonging to 27528
[2026-01-09 02:02:48] 2026-01-09 07:01:56,832 | INFO     | ready for new job
[2026-01-09 02:02:48] 2026-01-09 07:01:56,832 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 02:02:48] 2026-01-09 07:01:56,833 | INFO     | ***************************************
[2026-01-09 02:02:48] 2026-01-09 07:01:56,833 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 02:02:48] 2026-01-09 07:01:56,834 | INFO     | ***************************************
[2026-01-09 02:02:48] 2026-01-09 07:01:56,834 | INFO     | 
[2026-01-09 02:02:48] 2026-01-09 07:01:56,834 | INFO     | architecture information:
[2026-01-09 02:02:48] 2026-01-09 07:01:56,835 | INFO     | executing command: cat /etc/os-release
[2026-01-09 02:02:48] 2026-01-09 07:01:56,848 | INFO     | cat /etc/os-release:
[2026-01-09 02:02:48] NAME="CentOS Linux"
[2026-01-09 02:02:48] VERSION="7 (Core)"
[2026-01-09 02:02:48] ID="centos"
[2026-01-09 02:02:48] ID_LIKE="rhel fedora"
[2026-01-09 02:02:48] VERSION_ID="7"
[2026-01-09 02:02:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 02:02:48] ANSI_COLOR="0;31"
[2026-01-09 02:02:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 02:02:48] HOME_URL="https://www.centos.org/"
[2026-01-09 02:02:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 02:02:48] 
[2026-01-09 02:02:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 02:02:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 02:02:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 02:02:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 02:02:48] 
[2026-01-09 02:02:48] 2026-01-09 07:01:56,848 | INFO     | ***************************************
[2026-01-09 02:02:48] 2026-01-09 07:01:57,351 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 02:02:48] 2026-01-09 07:01:57,367 | INFO     | sufficient remaining disk space (18654167040 B)
[2026-01-09 02:02:48] 2026-01-09 07:01:57,368 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 02:02:48] 2026-01-09 07:01:57,368 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 02:02:48] 2026-01-09 07:01:57,368 | INFO     | update_server=False
[2026-01-09 02:02:48] 2026-01-09 07:01:57,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 02:02:48] 2026-01-09 07:01:57,369 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:02:48] 2026-01-09 07:01:57,369 | INFO     | aborting loop
[2026-01-09 02:02:48] 2026-01-09 07:01:57,369 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:02:48] 2026-01-09 07:01:57,832 | INFO     | all data control threads have been joined
[2026-01-09 02:02:48] 2026-01-09 07:01:57,935 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 02:02:48] 2026-01-09 07:01:58,024 | INFO     | all payload control threads have been joined
[2026-01-09 02:02:48] 2026-01-09 07:01:58,374 | INFO     | [job] retrieve thread has finished
[2026-01-09 02:02:48] 2026-01-09 07:01:58,374 | INFO     | [job] job monitor thread has finished
[2026-01-09 02:02:48] 2026-01-09 07:01:58,375 | INFO     | [job] queue monitor thread has finished
[2026-01-09 02:02:48] 2026-01-09 07:01:58,458 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 02:02:48] 2026-01-09 07:01:58,463 | INFO     | [job] validate thread has finished
[2026-01-09 02:02:48] 2026-01-09 07:01:58,488 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 02:02:48] 2026-01-09 07:01:58,516 | INFO     | all job control threads have been joined
[2026-01-09 02:02:48] 2026-01-09 07:01:58,520 | INFO     | [payload] validate_post thread has finished
[2026-01-09 02:02:48] 2026-01-09 07:01:58,798 | INFO     | [data] copytool_in thread has finished
[2026-01-09 02:02:48] 2026-01-09 07:01:58,838 | INFO     | [data] control thread has finished
[2026-01-09 02:02:48] 2026-01-09 07:01:59,030 | INFO     | [payload] control thread has finished
[2026-01-09 02:02:48] 2026-01-09 07:01:59,160 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 02:02:48] 2026-01-09 07:01:59,522 | INFO     | [job] control thread has finished
[2026-01-09 02:02:48] 2026-01-09 07:01:59,802 | INFO     | [payload] failed_post thread has finished
[2026-01-09 02:02:48] 2026-01-09 07:01:59,941 | INFO     | [data] copytool_out thread has finished
[2026-01-09 02:02:48] 2026-01-09 07:02:00,500 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 02:02:48] 2026-01-09 07:02:04,505 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 02:02:48] 2026-01-09 07:02:07,787 | INFO     | job.realtimelogging is not enabled
[2026-01-09 02:02:48] 2026-01-09 07:02:08,790 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 02:02:48] 2026-01-09 07:02:27,017 | INFO     | PID=21166 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 02:02:48] 2026-01-09 07:02:27,018 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 02:02:48] 2026-01-09 07:02:27,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 02:02:48] 2026-01-09 07:02:27,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 02:02:48] 2026-01-09 07:02:41,743 | INFO     | [monitor] cgroup control has ended
[2026-01-09 02:02:48] 2026-01-09 07:02:43,638 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140451391158080)>', '<ExcThread(monitor, started 140451084474112)>']
[2026-01-09 02:02:48] 2026-01-09 07:02:44,102 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 02:02:48] 2026-01-09 07:02:44,102 | INFO     | [monitor] control thread has ended
[2026-01-09 02:02:48] 2026-01-09 07:02:48,664 | INFO     | all workflow threads have been joined
[2026-01-09 02:02:48] 2026-01-09 07:02:48,664 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 02:02:48] 2026-01-09 07:02:48,664 | INFO     | traces error code: 0
[2026-01-09 02:02:48] 2026-01-09 07:02:48,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 02:02:48] 2026-01-09 07:02:48,763 [wrapper] ==== pilot stdout END ====
[2026-01-09 02:02:48] 2026-01-09 07:02:48,766 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 02:02:48] 2026-01-09 07:02:48,769 [wrapper] pilotpid: 21166
[2026-01-09 02:02:48] 2026-01-09 07:02:48,773 [wrapper] Pilot exit status: 0
[2026-01-09 02:02:48] 2026-01-09 07:02:48,789 [wrapper] pandaids: 6963155273
[2026-01-09 02:02:48] 2026-01-09 07:02:48,832 [wrapper] cleanup supervisor_pilot  3837 21167
[2026-01-09 02:02:48] 2026-01-09 07:02:48,837 [wrapper] Test setup, not cleaning
[2026-01-09 02:02:48] 2026-01-09 07:02:48,841 [wrapper] apfmon messages muted
[2026-01-09 02:02:48] 2026-01-09 07:02:48,845 [wrapper] ==== wrapper stdout END ====
[2026-01-09 02:02:48] 2026-01-09 07:02:48,849 [wrapper] ==== wrapper stderr END ====
[2026-01-09 02:02:48]  *** Error codes and diagnostics ***
[2026-01-09 02:02:48]     "exeErrorCode": 0,
[2026-01-09 02:02:48]     "exeErrorDiag": "",
[2026-01-09 02:02:48]     "pilotErrorCode": 0,
[2026-01-09 02:02:48]     "pilotErrorDiag": "",
[2026-01-09 02:02:48]  *** Listing of results directory ***
[2026-01-09 02:02:48] total 441800
[2026-01-09 02:02:48] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-09 02:02:48] -rwx------ 1 boincer umatlas     36322 Jan  8 14:06 runpilot2-wrapper.sh
[2026-01-09 02:02:48] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 14:07 queuedata.json
[2026-01-09 02:02:48] -rw-r--r-- 1 boincer umatlas       100 Jan  9 00:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 02:02:48] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 00:26 run_atlas
[2026-01-09 02:02:48] -rw-r--r-- 1 boincer umatlas       105 Jan  9 00:26 job.xml
[2026-01-09 02:02:48] -rw-r--r-- 2 boincer umatlas 224015239 Jan  9 00:26 EVNT.47898824._001181.pool.root.1
[2026-01-09 02:02:48] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 00:26 start_atlas.sh
[2026-01-09 02:02:48] drwxrwx--x 2 boincer umatlas      4096 Jan  9 00:26 shared
[2026-01-09 02:02:48] -rw-r--r-- 2 boincer umatlas    592395 Jan  9 00:26 input.tar.gz
[2026-01-09 02:02:48] -rw-r--r-- 1 boincer umatlas         0 Jan  9 00:26 boinc_lockfile
[2026-01-09 02:02:48] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 00:26 pandaJob.out
[2026-01-09 02:02:48] -rw------- 1 boincer umatlas        57 Jan  9 00:26 setup.sh.local
[2026-01-09 02:02:48] -rw------- 1 boincer umatlas    989771 Jan  9 00:26 agis_schedconf.cvmfs.json
[2026-01-09 02:02:48] -rw------- 1 boincer umatlas   1516240 Jan  9 00:26 agis_ddmendpoints.agis.ALL.json
[2026-01-09 02:02:48] drwx------ 5 boincer umatlas      4096 Jan  9 00:26 pilot3
[2026-01-09 02:02:48] -rw------- 1 boincer umatlas 222010329 Jan  9 02:01 HITS.47898826._030523.pool.root.1
[2026-01-09 02:02:48] -rw-r--r-- 1 boincer umatlas       529 Jan  9 02:01 boinc_task_state.xml
[2026-01-09 02:02:48] -rw------- 1 boincer umatlas      1047 Jan  9 02:01 memory_monitor_summary.json
[2026-01-09 02:02:48] -rw------- 1 boincer umatlas        95 Jan  9 02:01 pilot_heartbeat.json
[2026-01-09 02:02:48] -rw------- 1 boincer umatlas    415588 Jan  9 02:01 log.47898826._030523.job.log.tgz.1
[2026-01-09 02:02:48] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 02:01 init_data.xml
[2026-01-09 02:02:48] -rw------- 1 boincer umatlas      7854 Jan  9 02:01 heartbeat.json
[2026-01-09 02:02:48] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 02:02 boinc_mmap_file
[2026-01-09 02:02:48] -rw-r--r-- 1 boincer umatlas        27 Jan  9 02:02 wrapper_checkpoint.txt
[2026-01-09 02:02:48] -rw------- 1 boincer umatlas      4818 Jan  9 02:02 pilotlog.txt
[2026-01-09 02:02:48] -rw------- 1 boincer umatlas    817885 Jan  9 02:02 log.47898826._030523.job.log.1
[2026-01-09 02:02:48] -rw------- 1 boincer umatlas       357 Jan  9 02:02 output.list
[2026-01-09 02:02:48] -rw-r--r-- 1 boincer umatlas       620 Jan  9 02:02 runtime_log
[2026-01-09 02:02:48] -rw------- 1 boincer umatlas   1249280 Jan  9 02:02 result.tar.gz
[2026-01-09 02:02:48] -rw------- 1 boincer umatlas       659 Jan  9 02:02 FPQNDmJWAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDBlKDmwuiD3m.diag
[2026-01-09 02:02:48] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 02:02 runtime_log.err
[2026-01-09 02:02:48] -rw-r--r-- 1 boincer umatlas     21652 Jan  9 02:02 stderr.txt
[2026-01-09 02:02:48] HITS file was successfully produced:
[2026-01-09 02:02:49] -rw------- 1 boincer umatlas 222010329 Jan  9 02:01 shared/HITS.pool.root.1
[2026-01-09 02:02:49]  *** Contents of shared directory: ***
[2026-01-09 02:02:49] total 437396
[2026-01-09 02:02:49] -rw-r--r-- 2 boincer umatlas 224015239 Jan  9 00:26 ATLAS.root_0
[2026-01-09 02:02:49] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 00:26 start_atlas.sh
[2026-01-09 02:02:49] -rw-r--r-- 2 boincer umatlas    592395 Jan  9 00:26 input.tar.gz
[2026-01-09 02:02:49] -rw------- 1 boincer umatlas 222010329 Jan  9 02:01 HITS.pool.root.1
[2026-01-09 02:02:49] -rw------- 1 boincer umatlas   1249280 Jan  9 02:02 result.tar.gz
02:02:50 (17466): run_atlas exited; CPU time 60761.245017
02:02:50 (17466): called boinc_finish(0)

</stderr_txt>
]]>

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