Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:41:38 (4161476): wrapper (7.7.26015): starting
15:41:38 (4161476): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 15:41:38] Arguments: --nthreads 4
[2026-01-09 15:41:38] Threads: 4
[2026-01-09 15:41:38] Checking for CVMFS
[2026-01-09 15:41:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:41:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:41:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:41:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:41:38] 2.9.2.0 3660082 1830 90588 154946 1 57 18429513 36864001 0 130560 0 1262393 99.990 67277 4729 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 15:41:38] CVMFS is ok
[2026-01-09 15:41:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 15:41:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 15:41:38] Further information can be found at the LHC@home message board.
[2026-01-09 15:41:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:41:38] Checking for apptainer binary...
[2026-01-09 15:41:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:41:38] Running /usr/bin/apptainer --version
[2026-01-09 15:41:38] apptainer version 1.4.1-1.1
[2026-01-09 15:41:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:41:39] madmaxA277
[2026-01-09 15:41:39] apptainer works
[2026-01-09 15:41:39] Set ATHENA_PROC_NUMBER=4
[2026-01-09 15:41:39] Set ATHENA_CORE_NUMBER=4
[2026-01-09 15:41:39] Starting ATLAS job with PandaID=6963076942
[2026-01-09 15:41:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:07:59]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:07:59] 2026-01-09 16:07:27,141 | INFO     | number of running child processes to parent process 4171851: 1
[2026-01-09 17:07:59] 2026-01-09 16:07:27,141 | INFO     | maximum number of monitored processes: 9
[2026-01-09 17:07:59] 2026-01-09 16:07:27,141 | INFO     | aborting job monitoring since job object (job id=6963076942) has expired
[2026-01-09 17:07:59] 2026-01-09 16:07:28,113 | INFO     | --- collectZombieJob: --- 10, [4171851]
[2026-01-09 17:07:59] 2026-01-09 16:07:28,113 | INFO     | zombie collector waiting for pid 4171851
[2026-01-09 17:07:59] 2026-01-09 16:07:28,113 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:07:59] 2026-01-09 16:07:28,113 | INFO     | collected zombie processes
[2026-01-09 17:07:59] 2026-01-09 16:07:28,113 | INFO     | will attempt to kill all subprocesses of pid=4171851
[2026-01-09 17:07:59] 2026-01-09 16:07:28,157 | INFO     | process IDs to be killed: [4171851] (in reverse order)
[2026-01-09 17:07:59] 2026-01-09 16:07:28,189 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:07:59] 2026-01-09 16:07:28,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:07:59] 2026-01-09 16:07:28,191 | INFO     | did not find any defunct processes belonging to 4171851
[2026-01-09 17:07:59] 2026-01-09 16:07:28,193 | INFO     | did not find any defunct processes belonging to 4171851
[2026-01-09 17:07:59] 2026-01-09 16:07:28,193 | INFO     | ready for new job
[2026-01-09 17:07:59] 2026-01-09 16:07:28,193 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:07:59] 2026-01-09 16:07:28,194 | INFO     | ***************************************
[2026-01-09 17:07:59] 2026-01-09 16:07:28,194 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:07:59] 2026-01-09 16:07:28,194 | INFO     | ***************************************
[2026-01-09 17:07:59] 2026-01-09 16:07:28,194 | INFO     | 
[2026-01-09 17:07:59] 2026-01-09 16:07:28,194 | INFO     | architecture information:
[2026-01-09 17:07:59] 2026-01-09 16:07:28,195 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:07:59] 2026-01-09 16:07:28,208 | INFO     | cat /etc/os-release:
[2026-01-09 17:07:59] NAME="CentOS Linux"
[2026-01-09 17:07:59] VERSION="7 (Core)"
[2026-01-09 17:07:59] ID="centos"
[2026-01-09 17:07:59] ID_LIKE="rhel fedora"
[2026-01-09 17:07:59] VERSION_ID="7"
[2026-01-09 17:07:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:07:59] ANSI_COLOR="0;31"
[2026-01-09 17:07:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:07:59] HOME_URL="https://www.centos.org/"
[2026-01-09 17:07:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:07:59] 
[2026-01-09 17:07:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:07:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:07:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:07:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:07:59] 
[2026-01-09 17:07:59] 2026-01-09 16:07:28,208 | INFO     | ***************************************
[2026-01-09 17:07:59] 2026-01-09 16:07:28,711 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 17:07:59] 2026-01-09 16:07:28,725 | INFO     | sufficient remaining disk space (341031518208 B)
[2026-01-09 17:07:59] 2026-01-09 16:07:28,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:07:59] 2026-01-09 16:07:28,725 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:07:59] 2026-01-09 16:07:28,725 | INFO     | update_server=False
[2026-01-09 17:07:59] 2026-01-09 16:07:28,725 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:07:59] 2026-01-09 16:07:28,726 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:07:59] 2026-01-09 16:07:28,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:07:59] 2026-01-09 16:07:28,726 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:07:59] 2026-01-09 16:07:28,726 | INFO     | aborting loop
[2026-01-09 17:07:59] 2026-01-09 16:07:28,773 | INFO     | all payload control threads have been joined
[2026-01-09 17:07:59] 2026-01-09 16:07:28,809 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:07:59] 2026-01-09 16:07:29,231 | INFO     | all job control threads have been joined
[2026-01-09 17:07:59] 2026-01-09 16:07:29,730 | INFO     | all data control threads have been joined
[2026-01-09 17:07:59] 2026-01-09 16:07:29,731 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:07:59] 2026-01-09 16:07:29,731 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:07:59] 2026-01-09 16:07:29,731 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:07:59] 2026-01-09 16:07:29,778 | INFO     | [payload] control thread has finished
[2026-01-09 17:07:59] 2026-01-09 16:07:29,900 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:07:59] 2026-01-09 16:07:30,183 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:07:59] 2026-01-09 16:07:30,236 | INFO     | [job] control thread has finished
[2026-01-09 17:07:59] 2026-01-09 16:07:30,736 | INFO     | [data] control thread has finished
[2026-01-09 17:07:59] 2026-01-09 16:07:30,814 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:07:59] 2026-01-09 16:07:30,865 | INFO     | [job] validate thread has finished
[2026-01-09 17:07:59] 2026-01-09 16:07:30,920 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:07:59] 2026-01-09 16:07:30,996 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:07:59] 2026-01-09 16:07:31,099 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:07:59] 2026-01-09 16:07:31,268 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:07:59] 2026-01-09 16:07:32,732 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:07:59] 2026-01-09 16:07:39,174 | INFO     | job.realtimelogging is not enabled
[2026-01-09 17:07:59] 2026-01-09 16:07:40,179 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:07:59] 2026-01-09 16:07:52,361 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:07:59] 2026-01-09 16:07:53,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140225080035136)>', '<ExcThread(monitor, started 140224214583040)>']
[2026-01-09 17:07:59] 2026-01-09 16:07:58,209 | INFO     | all workflow threads have been joined
[2026-01-09 17:07:59] 2026-01-09 16:07:58,209 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:07:59] 2026-01-09 16:07:58,209 | INFO     | traces error code: 0
[2026-01-09 17:07:59] 2026-01-09 16:07:58,210 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:07:59] 2026-01-09 16:07:59,694 | INFO     | PID=4165266 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 17:07:59] 2026-01-09 16:07:59,695 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:07:59] 2026-01-09 16:07:59,695 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:07:59] 2026-01-09 16:07:59,695 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:07:59] 2026-01-09 16:07:59,695 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:07:59] 2026-01-09 16:07:59,695 | INFO     | [monitor] control thread has ended
[2026-01-09 17:07:59] 2026-01-09 16:07:59,769 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:07:59] 2026-01-09 16:07:59,773 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:07:59] 2026-01-09 16:07:59,776 [wrapper] pilotpid: 4165266
[2026-01-09 17:07:59] 2026-01-09 16:07:59,780 [wrapper] Pilot exit status: 0
[2026-01-09 17:07:59] 2026-01-09 16:07:59,791 [wrapper] pandaids: 6963076942
[2026-01-09 17:07:59] 2026-01-09 16:07:59,812 [wrapper] cleanup supervisor_pilot 4184913 4165267
[2026-01-09 17:07:59] 2026-01-09 16:07:59,816 [wrapper] Test setup, not cleaning
[2026-01-09 17:07:59] 2026-01-09 16:07:59,819 [wrapper] apfmon messages muted
[2026-01-09 17:07:59] 2026-01-09 16:07:59,822 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:07:59] 2026-01-09 16:07:59,826 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:07:59]  *** Error codes and diagnostics ***
[2026-01-09 17:07:59]     "exeErrorCode": 0,
[2026-01-09 17:07:59]     "exeErrorDiag": "",
[2026-01-09 17:07:59]     "pilotErrorCode": 0,
[2026-01-09 17:07:59]     "pilotErrorDiag": "",
[2026-01-09 17:07:59]  *** Listing of results directory ***
[2026-01-09 17:07:59] total 560012
[2026-01-09 17:07:59] -rw-r--r-- 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 17:07:59] -rwx------ 1 boinc boinc     36322 Jan  8 12:56 runpilot2-wrapper.sh
[2026-01-09 17:07:59] -rw-r--r-- 1 boinc boinc      5112 Jan  8 12:57 queuedata.json
[2026-01-09 17:07:59] -rw-r--r-- 1 boinc boinc       100 Jan  9 15:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:07:59] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 15:41 run_atlas
[2026-01-09 17:07:59] -rw-r--r-- 1 boinc boinc       105 Jan  9 15:41 job.xml
[2026-01-09 17:07:59] -rw-r--r-- 2 boinc boinc 417959380 Jan  9 15:41 EVNT.47947080._000077.pool.root.1
[2026-01-09 17:07:59] -rw-r--r-- 2 boinc boinc    592612 Jan  9 15:41 input.tar.gz
[2026-01-09 17:07:59] -rw-r--r-- 2 boinc boinc     15847 Jan  9 15:41 start_atlas.sh
[2026-01-09 17:07:59] drwxrwx--x 2 boinc boinc      4096 Jan  9 15:41 shared
[2026-01-09 17:07:59] -rw-r--r-- 1 boinc boinc         0 Jan  9 15:41 boinc_setup_complete
[2026-01-09 17:07:59] -rw-r--r-- 1 boinc boinc      6372 Jan  9 15:41 init_data.xml
[2026-01-09 17:07:59] -rw-r--r-- 1 boinc boinc         0 Jan  9 15:41 boinc_lockfile
[2026-01-09 17:07:59] -rw-r--r-- 1 boinc boinc      2876 Jan  9 15:41 pandaJob.out
[2026-01-09 17:07:59] -rw------- 1 boinc boinc    989377 Jan  9 15:41 agis_schedconf.cvmfs.json
[2026-01-09 17:07:59] -rw------- 1 boinc boinc   1516240 Jan  9 15:41 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:07:59] drwx------ 5 boinc boinc      4096 Jan  9 15:41 pilot3
[2026-01-09 17:07:59] -rw-r--r-- 1 boinc boinc       529 Jan  9 17:04 boinc_task_state.xml
[2026-01-09 17:07:59] -rw------- 1 boinc boinc 148474072 Jan  9 17:07 HITS.47947082._005201.pool.root.1
[2026-01-09 17:07:59] -rw------- 1 boinc boinc        95 Jan  9 17:07 pilot_heartbeat.json
[2026-01-09 17:07:59] -rw------- 1 boinc boinc      1018 Jan  9 17:07 memory_monitor_summary.json
[2026-01-09 17:07:59] -rw------- 1 boinc boinc    800142 Jan  9 17:07 log.47947082._005201.job.log.tgz.1
[2026-01-09 17:07:59] -rw------- 1 boinc boinc      8566 Jan  9 17:07 heartbeat.json
[2026-01-09 17:07:59] -rw-r--r-- 1 boinc boinc      8192 Jan  9 17:07 boinc_mmap_file
[2026-01-09 17:07:59] -rw-r--r-- 1 boinc boinc        27 Jan  9 17:07 wrapper_checkpoint.txt
[2026-01-09 17:07:59] -rw------- 1 boinc boinc       747 Jan  9 17:07 pilotlog.txt
[2026-01-09 17:07:59] -rw------- 1 boinc boinc    761636 Jan  9 17:07 log.47947082._005201.job.log.1
[2026-01-09 17:07:59] -rw------- 1 boinc boinc       353 Jan  9 17:07 output.list
[2026-01-09 17:07:59] -rw-r--r-- 1 boinc boinc       620 Jan  9 17:07 runtime_log
[2026-01-09 17:07:59] -rw------- 1 boinc boinc   1576960 Jan  9 17:07 result.tar.gz
[2026-01-09 17:07:59] -rw-r--r-- 1 boinc boinc      8917 Jan  9 17:07 runtime_log.err
[2026-01-09 17:07:59] -rw------- 1 boinc boinc       664 Jan  9 17:07 0wdLDmNo3x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuHfKDm0RNwZm.diag
[2026-01-09 17:07:59] -rw-r--r-- 1 boinc boinc     11065 Jan  9 17:07 stderr.txt
[2026-01-09 17:07:59] HITS file was successfully produced:
[2026-01-09 17:07:59] -rw------- 1 boinc boinc 148474072 Jan  9 17:07 shared/HITS.pool.root.1
[2026-01-09 17:07:59]  *** Contents of shared directory: ***
[2026-01-09 17:07:59] total 555304
[2026-01-09 17:07:59] -rw-r--r-- 2 boinc boinc 417959380 Jan  9 15:41 ATLAS.root_0
[2026-01-09 17:07:59] -rw-r--r-- 2 boinc boinc    592612 Jan  9 15:41 input.tar.gz
[2026-01-09 17:07:59] -rw-r--r-- 2 boinc boinc     15847 Jan  9 15:41 start_atlas.sh
[2026-01-09 17:07:59] -rw------- 1 boinc boinc 148474072 Jan  9 17:07 HITS.pool.root.1
[2026-01-09 17:07:59] -rw------- 1 boinc boinc   1576960 Jan  9 17:07 result.tar.gz
17:08:01 (4161476): run_atlas exited; CPU time 18432.834829
17:08:01 (4161476): called boinc_finish(0)

</stderr_txt>
]]>

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