Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:12:39 (3223391): wrapper (7.7.26015): starting
00:12:39 (3223391): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 00:12:39] Arguments: --nthreads 9
[2026-01-09 00:12:39] Threads: 9
[2026-01-09 00:12:39] Checking for CVMFS
[2026-01-09 00:12:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:12:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:12:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:12:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:12:42] 2.13.3.0 11414 92928 147720 154932 2 292 13178271 25181185 34238 16776704 0 509554422 99.581 530157483 26304 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:12:42] CVMFS is ok
[2026-01-09 00:12:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:12:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:12:42] Further information can be found at the LHC@home message board.
[2026-01-09 00:12:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:12:42] Checking for apptainer binary...
[2026-01-09 00:12:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:12:42] Running /usr/bin/apptainer --version
[2026-01-09 00:12:42] apptainer version 1.4.5-2.el9
[2026-01-09 00:12:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:12:43] c-16-34.aglt2.org
[2026-01-09 00:12:43] apptainer works
[2026-01-09 00:12:43] Set ATHENA_PROC_NUMBER=9
[2026-01-09 00:12:43] Set ATHENA_CORE_NUMBER=9
[2026-01-09 00:12:43] Starting ATLAS job with PandaID=6963144142
[2026-01-09 00:12:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:01:56]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:01:56] 2026-01-10 01:00:37,530 | INFO     | sum of deviations: 1422063777255.4253
[2026-01-09 20:01:56] 2026-01-10 01:00:37,553 | INFO     | mean x: 1767971244.9356222
[2026-01-09 20:01:56] 2026-01-10 01:00:37,554 | INFO     | mean y: 2514603.365665236
[2026-01-09 20:01:56] 2026-01-10 01:00:37,554 | INFO     | intersect: -5125610881.612005
[2026-01-09 20:01:56] 2026-01-10 01:00:37,546 | INFO     | monitor loop #3472: job 0:6963144142 is in state 'finished'
[2026-01-09 20:01:56] 2026-01-10 01:00:37,564 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:01:56] 2026-01-10 01:00:37,561 | INFO     | chi2: 8.315213162553645
[2026-01-09 20:01:56] 2026-01-10 01:00:37,565 | INFO     | sum of square deviations: 483984802085.53125
[2026-01-09 20:01:56] 2026-01-10 01:00:37,666 | INFO     | sum of deviations: 1715206199324.676
[2026-01-09 20:01:56] 2026-01-10 01:00:37,667 | INFO     | mean x: 1767971092.437931
[2026-01-09 20:01:56] 2026-01-10 01:00:37,667 | INFO     | mean y: 2521709.0301724137
[2026-01-09 20:01:56] 2026-01-10 01:00:37,667 | INFO     | intersect: -6263036558.31488
[2026-01-09 20:01:56] 2026-01-10 01:00:37,669 | INFO     | chi2: 5.51683879762643
[2026-01-09 20:01:56] 2026-01-10 01:00:37,669 | INFO     | current chi2=5.51683879762643 (change=33.65366960800581 %)
[2026-01-09 20:01:56] 2026-01-10 01:00:37,675 | INFO     | sum of square deviations: 477752998041.51196
[2026-01-09 20:01:56] 2026-01-10 01:00:37,877 | INFO     | sum of deviations: 1703432312959.2017
[2026-01-09 20:01:56] 2026-01-10 01:00:37,878 | INFO     | mean x: 1767970939.9376624
[2026-01-09 20:01:56] 2026-01-10 01:00:37,878 | INFO     | mean y: 2521420.9056277056
[2026-01-09 20:01:56] 2026-01-10 01:00:37,878 | INFO     | intersect: -6301193762.062176
[2026-01-09 20:01:56] 2026-01-10 01:00:37,916 | INFO     | chi2: 5.516063479166397
[2026-01-09 20:01:56] 2026-01-10 01:00:37,916 | INFO     | current chi2=5.516063479166397 (change=0.014053672555487949 %)
[2026-01-09 20:01:56] 2026-01-10 01:00:37,916 | INFO     | right removable region: 1154
[2026-01-09 20:01:56] 2026-01-10 01:00:37,918 | INFO     | sum of square deviations: 483984279191.7758
[2026-01-09 20:01:56] 2026-01-10 01:00:38,222 | INFO     | sum of deviations: 1079919053505.5273
[2026-01-09 20:01:56] 2026-01-10 01:00:38,222 | INFO     | mean x: 1767971397.439655
[2026-01-09 20:01:56] 2026-01-10 01:00:38,223 | INFO     | mean y: 2522901.2146551725
[2026-01-09 20:01:56] 2026-01-10 01:00:38,223 | INFO     | intersect: -3942369691.8593063
[2026-01-09 20:01:56] 2026-01-10 01:00:38,224 | INFO     | chi2: 5.3136566992913545
[2026-01-09 20:01:56] 2026-01-10 01:00:38,224 | INFO     | current chi2=5.3136566992913545 (change=36.09716798096487 %)
[2026-01-09 20:01:56] 2026-01-10 01:00:38,226 | INFO     | sum of square deviations: 477752164777.3417
[2026-01-09 20:01:56] 2026-01-10 01:00:38,333 | INFO     | sum of deviations: 833151609763.4514
[2026-01-09 20:01:56] 2026-01-10 01:00:38,333 | INFO     | mean x: 1767971549.943723
[2026-01-09 20:01:56] 2026-01-10 01:00:38,334 | INFO     | mean y: 2528938.406926407
[2026-01-09 20:01:56] 2026-01-10 01:00:38,334 | INFO     | intersect: -3080635202.854661
[2026-01-09 20:01:56] 2026-01-10 01:00:38,363 | INFO     | chi2: 3.834918399159746
[2026-01-09 20:01:56] 2026-01-10 01:00:38,363 | INFO     | current chi2=3.834918399159746 (change=27.82901462807745 %)
[2026-01-09 20:01:56] 2026-01-10 01:00:38,365 | INFO     | sum of square deviations: 471574053633.9385
[2026-01-09 20:01:56] 2026-01-10 01:00:38,541 | INFO     | sum of deviations: 709761458072.5387
[2026-01-09 20:01:56] 2026-01-10 01:00:38,542 | INFO     | mean x: 1767971702.4443479
[2026-01-09 20:01:56] 2026-01-10 01:00:38,542 | INFO     | mean y: 2531981.8521739133
[2026-01-09 20:01:56] 2026-01-10 01:00:38,542 | INFO     | intersect: -2658424794.052131
[2026-01-09 20:01:56] 2026-01-10 01:00:38,543 | INFO     | chi2: 3.459026305867319
[2026-01-09 20:01:56] 2026-01-10 01:00:38,544 | INFO     | current chi2=3.459026305867319 (change=9.801827683603053 %)
[2026-01-09 20:01:56] 2026-01-10 01:00:38,555 | INFO     | left removable region: 30
[2026-01-09 20:01:56] 2026-01-10 01:00:38,557 | INFO     | sum of square deviations: 440305643461.4685
[2026-01-09 20:01:56] 2026-01-10 01:00:38,809 | INFO     | sum of deviations: 812766768260.7029
[2026-01-09 20:01:56] 2026-01-10 01:00:38,810 | INFO     | mean x: 1767971824.4439502
[2026-01-09 20:01:56] 2026-01-10 01:00:38,810 | INFO     | mean y: 2543576.265124555
[2026-01-09 20:01:56] 2026-01-10 01:00:38,810 | INFO     | intersect: -3260982039.3338423
[2026-01-09 20:01:56] 2026-01-10 01:00:38,812 | INFO     | chi2: 0.410097850655888
[2026-01-09 20:01:56] 2026-01-10 01:00:38,812 | INFO     | current memory leak: 1.85 B/s (using 1124 data points, chi2=0.41)
[2026-01-09 20:01:56] 2026-01-10 01:00:38,817 | INFO     | could have reported an average CPU frequency of 2807 MHz (42 samples)
[2026-01-09 20:01:56] 2026-01-10 01:00:38,818 | INFO     | ..............................
[2026-01-09 20:01:56] 2026-01-10 01:00:38,818 | INFO     | . Timing measurements:
[2026-01-09 20:01:56] 2026-01-10 01:00:38,818 | INFO     | . get job = 0 s
[2026-01-09 20:01:56] 2026-01-10 01:00:38,818 | INFO     | . initial setup = 6 s
[2026-01-09 20:01:56] 2026-01-10 01:00:38,818 | INFO     | . payload setup = 40 s
[2026-01-09 20:01:56] 2026-01-10 01:00:38,818 | INFO     | . stage-in = 0 s
[2026-01-09 20:01:56] 2026-01-10 01:00:38,818 | INFO     | . payload execution = 71067 s
[2026-01-09 20:01:56] 2026-01-10 01:00:38,819 | INFO     | . stage-out = 9 s
[2026-01-09 20:01:56] 2026-01-10 01:00:38,819 | INFO     | . log creation = 2 s
[2026-01-09 20:01:56] 2026-01-10 01:00:38,819 | INFO     | ..............................
[2026-01-09 20:01:56] 2026-01-10 01:00:38,859 | INFO     | time since job start (71228s) is within the limit (174528.0s)
[2026-01-09 20:01:56] 2026-01-10 01:00:39,520 | INFO     | 
[2026-01-09 20:01:56] 2026-01-10 01:00:39,521 | INFO     | job summary report
[2026-01-09 20:01:56] 2026-01-10 01:00:39,521 | INFO     | --------------------------------------------------
[2026-01-09 20:01:56] 2026-01-10 01:00:39,521 | INFO     | PanDA job id: 6963144142
[2026-01-09 20:01:56] 2026-01-10 01:00:39,521 | INFO     | task id: 47898826
[2026-01-09 20:01:56] 2026-01-10 01:00:39,521 | INFO     | errors: (none)
[2026-01-09 20:01:56] 2026-01-10 01:00:39,521 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:01:56] 2026-01-10 01:00:39,521 | INFO     | pilot state: finished 
[2026-01-09 20:01:56] 2026-01-10 01:00:39,521 | INFO     | transexitcode: 0
[2026-01-09 20:01:56] 2026-01-10 01:00:39,522 | INFO     | exeerrorcode: 0
[2026-01-09 20:01:56] 2026-01-10 01:00:39,522 | INFO     | exeerrordiag: 
[2026-01-09 20:01:56] 2026-01-10 01:00:39,522 | INFO     | exitcode: 0
[2026-01-09 20:01:56] 2026-01-10 01:00:39,522 | INFO     | exitmsg: OK
[2026-01-09 20:01:56] 2026-01-10 01:00:39,522 | INFO     | cpuconsumptiontime: 76044 s
[2026-01-09 20:01:56] 2026-01-10 01:00:39,522 | INFO     | nevents: 400
[2026-01-09 20:01:56] 2026-01-10 01:00:39,522 | INFO     | neventsw: 0
[2026-01-09 20:01:56] 2026-01-10 01:00:39,522 | INFO     | pid: 3258133
[2026-01-09 20:01:56] 2026-01-10 01:00:39,522 | INFO     | pgrp: 3258133
[2026-01-09 20:01:56] 2026-01-10 01:00:39,523 | INFO     | corecount: 9
[2026-01-09 20:01:56] 2026-01-10 01:00:39,523 | INFO     | event service: False
[2026-01-09 20:01:56] 2026-01-10 01:00:39,523 | INFO     | sizes: {0: 2283797, 1: 2283797, 2: 2284024, 3: 2284024, 13: 2284052, 24: 2284108, 27: 2284526, 35: 2284554, 71113: 2339679, 71124: 2348677, 71127: 2348733, 71167: 
[2026-01-09 20:01:56] 2026-01-10 01:00:39,523 | INFO     | --------------------------------------------------
[2026-01-09 20:01:56] 2026-01-10 01:00:39,523 | INFO     | 
[2026-01-09 20:01:56] 2026-01-10 01:00:39,523 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 20:01:56] 2026-01-10 01:00:39,753 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,754 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,754 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,754 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,754 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,754 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,754 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,754 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,754 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,755 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,755 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,755 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,755 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,755 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,755 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,755 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,755 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,755 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:01:56] 2026-01-10 01:00:39,756 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,756 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:01:56] 2026-01-10 01:00:39,756 | INFO     | job 6963144142 has completed (purged errors)
[2026-01-09 20:01:56] 2026-01-10 01:00:39,756 | INFO     | overall cleanup function is called
[2026-01-09 20:01:56] 2026-01-10 01:00:40,783 | INFO     | --- collectZombieJob: --- 10, [3258133]
[2026-01-09 20:01:56] 2026-01-10 01:00:40,783 | INFO     | zombie collector waiting for pid 3258133
[2026-01-09 20:01:56] 2026-01-10 01:00:40,783 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:01:56] 2026-01-10 01:00:40,783 | INFO     | collected zombie processes
[2026-01-09 20:01:56] 2026-01-10 01:00:40,783 | INFO     | will attempt to kill all subprocesses of pid=3258133
[2026-01-09 20:01:56] 2026-01-10 01:00:43,892 | INFO     | process IDs to be killed: [3258133] (in reverse order)
[2026-01-09 20:01:56] 2026-01-10 01:00:46,388 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:01:56] 2026-01-10 01:00:46,388 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:01:56] 2026-01-10 01:00:46,735 | INFO     | did not find any defunct processes belonging to 3258133
[2026-01-09 20:01:56] 2026-01-10 01:00:46,835 | INFO     | did not find any defunct processes belonging to 3258133
[2026-01-09 20:01:56] 2026-01-10 01:00:46,835 | INFO     | ready for new job
[2026-01-09 20:01:56] 2026-01-10 01:00:46,835 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:01:56] 2026-01-10 01:00:46,839 | INFO     | ***************************************
[2026-01-09 20:01:56] 2026-01-10 01:00:46,840 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:01:56] 2026-01-10 01:00:46,840 | INFO     | ***************************************
[2026-01-09 20:01:56] 2026-01-10 01:00:46,840 | INFO     | 
[2026-01-09 20:01:56] 2026-01-10 01:00:46,843 | INFO     | architecture information:
[2026-01-09 20:01:56] 2026-01-10 01:00:46,844 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:01:56] 2026-01-10 01:00:46,883 | INFO     | cat /etc/os-release:
[2026-01-09 20:01:56] NAME="CentOS Linux"
[2026-01-09 20:01:56] VERSION="7 (Core)"
[2026-01-09 20:01:56] ID="centos"
[2026-01-09 20:01:56] ID_LIKE="rhel fedora"
[2026-01-09 20:01:56] VERSION_ID="7"
[2026-01-09 20:01:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:01:56] ANSI_COLOR="0;31"
[2026-01-09 20:01:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:01:56] HOME_URL="https://www.centos.org/"
[2026-01-09 20:01:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:01:56] 
[2026-01-09 20:01:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:01:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:01:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:01:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:01:56] 
[2026-01-09 20:01:56] 2026-01-10 01:00:46,883 | INFO     | ***************************************
[2026-01-09 20:01:56] 2026-01-10 01:00:47,387 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 20:01:56] 2026-01-10 01:00:47,584 | INFO     | sufficient remaining disk space (63996690432 B)
[2026-01-09 20:01:56] 2026-01-10 01:00:47,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:01:56] 2026-01-10 01:00:47,585 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:01:56] 2026-01-10 01:00:47,585 | INFO     | update_server=False
[2026-01-09 20:01:56] 2026-01-10 01:00:47,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:01:56] 2026-01-10 01:00:47,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:01:56] 2026-01-10 01:00:47,621 | INFO     | all data control threads have been joined
[2026-01-09 20:01:56] 2026-01-10 01:00:47,809 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:01:56] 2026-01-10 01:00:47,988 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 20:01:56] 2026-01-10 01:00:47,988 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 20:01:56] 2026-01-10 01:00:47,989 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:01:56] 2026-01-10 01:00:47,989 | INFO     | will abort loop
[2026-01-09 20:01:56] 2026-01-10 01:00:48,514 | INFO     | all payload control threads have been joined
[2026-01-09 20:01:56] 2026-01-10 01:00:48,591 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:01:56] 2026-01-10 01:00:48,627 | INFO     | [data] control thread has finished
[2026-01-09 20:01:56] 2026-01-10 01:00:48,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:01:56] 2026-01-10 01:00:49,004 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:01:56] 2026-01-10 01:00:49,136 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:01:56] 2026-01-10 01:00:49,250 | INFO     | all job control threads have been joined
[2026-01-09 20:01:56] 2026-01-10 01:00:49,520 | INFO     | [payload] control thread has finished
[2026-01-09 20:01:56] 2026-01-10 01:00:49,696 | INFO     | [job] validate thread has finished
[2026-01-09 20:01:56] 2026-01-10 01:00:49,697 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:01:56] 2026-01-10 01:00:49,697 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:01:56] 2026-01-10 01:00:49,698 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:01:56] 2026-01-10 01:00:49,706 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:01:56] 2026-01-10 01:00:49,760 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:01:56] 2026-01-10 01:00:49,788 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:01:56] 2026-01-10 01:00:49,828 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:01:56] 2026-01-10 01:00:49,828 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:01:56] 2026-01-10 01:00:50,259 | INFO     | [job] control thread has finished
[2026-01-09 20:01:56] 2026-01-10 01:00:51,613 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:01:56] 2026-01-10 01:01:16,571 | INFO     | PID=3234807 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:01:56] 2026-01-10 01:01:16,571 | INFO     | .. there are 47 such processes running
[2026-01-09 20:01:56] 2026-01-10 01:01:16,583 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:01:56] 2026-01-10 01:01:16,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:01:56] 2026-01-10 01:01:16,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:01:56] 2026-01-10 01:01:47,453 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:01:56] 2026-01-10 01:01:47,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140018880730944)>', '<ExcThread(monitor, started 140018383304448)>']
[2026-01-09 20:01:56] 2026-01-10 01:01:47,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:01:56] 2026-01-10 01:01:47,941 | INFO     | [monitor] control thread has ended
[2026-01-09 20:01:56] 2026-01-10 01:01:52,920 | INFO     | all workflow threads have been joined
[2026-01-09 20:01:56] 2026-01-10 01:01:52,920 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:01:56] 2026-01-10 01:01:52,920 | INFO     | traces error code: 0
[2026-01-09 20:01:56] 2026-01-10 01:01:52,921 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:01:56] 2026-01-10 01:01:54,596 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:01:56] 2026-01-10 01:01:54,617 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:01:56] 2026-01-10 01:01:54,642 [wrapper] pilotpid: 3234807
[2026-01-09 20:01:56] 2026-01-10 01:01:54,648 [wrapper] Pilot exit status: 0
[2026-01-09 20:01:56] 2026-01-10 01:01:54,739 [wrapper] pandaids: 6963144142
[2026-01-09 20:01:56] 2026-01-10 01:01:55,039 [wrapper] cleanup supervisor_pilot 2747065 3234808
[2026-01-09 20:01:56] 2026-01-10 01:01:55,050 [wrapper] Test setup, not cleaning
[2026-01-09 20:01:56] 2026-01-10 01:01:55,056 [wrapper] apfmon messages muted
[2026-01-09 20:01:56] 2026-01-10 01:01:55,060 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:01:56] 2026-01-10 01:01:55,065 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:01:56]  *** Error codes and diagnostics ***
[2026-01-09 20:01:56]     "exeErrorCode": 0,
[2026-01-09 20:01:56]     "exeErrorDiag": "",
[2026-01-09 20:01:56]     "pilotErrorCode": 0,
[2026-01-09 20:01:56]     "pilotErrorDiag": "",
[2026-01-09 20:01:56]  *** Listing of results directory ***
[2026-01-09 20:01:56] total 456268
[2026-01-09 20:01:56] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 07:19 pilot3.tar.gz
[2026-01-09 20:01:56] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 07:22 queuedata.json
[2026-01-09 20:01:56] -rwx------. 1 boincer umatlas     36322 Jan  8 07:22 runpilot2-wrapper.sh
[2026-01-09 20:01:56] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:01:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:12 run_atlas
[2026-01-09 20:01:56] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:12 job.xml
[2026-01-09 20:01:56] -rw-r--r--. 2 boincer umatlas 225772522 Jan  9 00:12 EVNT.47898824._001008.pool.root.1
[2026-01-09 20:01:56] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:12 shared
[2026-01-09 20:01:56] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 00:12 input.tar.gz
[2026-01-09 20:01:56] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:12 start_atlas.sh
[2026-01-09 20:01:56] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:12 boinc_lockfile
[2026-01-09 20:01:56] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 00:12 pandaJob.out
[2026-01-09 20:01:56] -rw-------. 1 boincer umatlas        57 Jan  9 00:12 setup.sh.local
[2026-01-09 20:01:56] -rw-------. 1 boincer umatlas    989771 Jan  9 00:13 agis_schedconf.cvmfs.json
[2026-01-09 20:01:56] drwx------. 5 boincer umatlas      4096 Jan  9 00:13 pilot3
[2026-01-09 20:01:56] -rw-------. 1 boincer umatlas 219704115 Jan  9 19:55 HITS.47898826._025353.pool.root.1
[2026-01-09 20:01:56] -rw-r--r--. 1 boincer umatlas       531 Jan  9 19:55 boinc_task_state.xml
[2026-01-09 20:01:56] -rw-r--r--. 1 boincer umatlas      6612 Jan  9 19:56 init_data.xml
[2026-01-09 20:01:56] -rw-------. 1 boincer umatlas      1062 Jan  9 19:59 memory_monitor_summary.json
[2026-01-09 20:01:56] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:59 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:01:56] -rw-------. 1 boincer umatlas   1118796 Jan  9 19:59 log.47898826._025353.job.log.tgz.1
[2026-01-09 20:01:56] -rw-------. 1 boincer umatlas      7857 Jan  9 20:00 heartbeat.json
[2026-01-09 20:01:56] -rw-------. 1 boincer umatlas        95 Jan  9 20:01 pilot_heartbeat.json
[2026-01-09 20:01:56] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 20:01 boinc_mmap_file
[2026-01-09 20:01:56] -rw-r--r--. 1 boincer umatlas        28 Jan  9 20:01 wrapper_checkpoint.txt
[2026-01-09 20:01:56] -rw-------. 1 boincer umatlas      5010 Jan  9 20:01 pilotlog.txt
[2026-01-09 20:01:56] -rw-------. 1 boincer umatlas   7790601 Jan  9 20:01 log.47898826._025353.job.log.1
[2026-01-09 20:01:56] -rw-------. 1 boincer umatlas       357 Jan  9 20:01 output.list
[2026-01-09 20:01:56] -rw-r--r--. 1 boincer umatlas       620 Jan  9 20:01 runtime_log
[2026-01-09 20:01:56] -rw-------. 1 boincer umatlas   8929280 Jan  9 20:01 result.tar.gz
[2026-01-09 20:01:56] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 20:01 runtime_log.err
[2026-01-09 20:01:56] -rw-------. 1 boincer umatlas       663 Jan  9 20:01 FXANDmdD4x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBZkKDmRql2Gm.diag
[2026-01-09 20:01:56] -rw-r--r--. 1 boincer umatlas     21159 Jan  9 20:01 stderr.txt
[2026-01-09 20:01:56] HITS file was successfully produced:
[2026-01-09 20:01:56] -rw-------. 1 boincer umatlas 219704115 Jan  9 19:55 shared/HITS.pool.root.1
[2026-01-09 20:01:56]  *** Contents of shared directory: ***
[2026-01-09 20:01:56] total 444364
[2026-01-09 20:01:56] -rw-r--r--. 2 boincer umatlas 225772522 Jan  9 00:12 ATLAS.root_0
[2026-01-09 20:01:56] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 00:12 input.tar.gz
[2026-01-09 20:01:56] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:12 start_atlas.sh
[2026-01-09 20:01:56] -rw-------. 1 boincer umatlas 219704115 Jan  9 19:55 HITS.pool.root.1
[2026-01-09 20:01:56] -rw-------. 1 boincer umatlas   8929280 Jan  9 20:01 result.tar.gz
20:01:58 (3223391): run_atlas exited; CPU time 79927.508301
20:01:58 (3223391): called boinc_finish(0)

</stderr_txt>
]]>

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