Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:53:01 (2195251): wrapper (7.7.26015): starting
15:53:01 (2195251): wrapper: running run_atlas (--nthreads 6)
[2026-01-09 15:53:01] Arguments: --nthreads 6
[2026-01-09 15:53:01] Threads: 6
[2026-01-09 15:53:01] Checking for CVMFS
[2026-01-09 15:53:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:53:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:53:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:53:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:53:02] 2.13.3.0 2126625 95 50136 154934 0 57 46823668 52428801 1858 130560 0 216814 99.996 2767 11 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-09 15:53:02] CVMFS is ok
[2026-01-09 15:53:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:53:02] Checking for apptainer binary...
[2026-01-09 15:53:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:53:02] Running /usr/bin/apptainer --version
[2026-01-09 15:53:02] apptainer version 1.4.4-1.el9
[2026-01-09 15:53:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:53:02] testio008
[2026-01-09 15:53:02] apptainer works
[2026-01-09 15:53:02] Set ATHENA_PROC_NUMBER=6
[2026-01-09 15:53:02] Set ATHENA_CORE_NUMBER=6
[2026-01-09 15:53:02] Starting ATLAS job with PandaID=6962917711
[2026-01-09 15:53:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:27:24]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:27:24] 2026-01-09 08:26:24,791 | INFO     | time since job start (5595s) is within the limit (174528.0s)
[2026-01-09 17:27:24] 2026-01-09 08:26:26,796 | INFO     | time since job start (5597s) is within the limit (174528.0s)
[2026-01-09 17:27:24] 2026-01-09 08:26:28,801 | INFO     | time since job start (5599s) is within the limit (174528.0s)
[2026-01-09 17:27:24] 2026-01-09 08:26:30,806 | INFO     | time since job start (5601s) is within the limit (174528.0s)
[2026-01-09 17:27:24] 2026-01-09 08:26:31,912 | INFO     | PID=2199031 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 17:27:24] 2026-01-09 08:26:31,913 | INFO     | .. there are 3 such processes running
[2026-01-09 17:27:24] 2026-01-09 08:26:32,913 | INFO     | time since job start (5603s) is within the limit (174528.0s)
[2026-01-09 17:27:24] 2026-01-09 08:26:34,918 | INFO     | time since job start (5605s) is within the limit (174528.0s)
[2026-01-09 17:27:24] 2026-01-09 08:26:36,924 | INFO     | time since job start (5607s) is within the limit (174528.0s)
[2026-01-09 17:27:24] 2026-01-09 08:26:38,928 | INFO     | time since job start (5609s) is within the limit (174528.0s)
[2026-01-09 17:27:24] 2026-01-09 08:26:40,933 | INFO     | time since job start (5611s) is within the limit (174528.0s)
[2026-01-09 17:27:24] 2026-01-09 08:26:42,938 | INFO     | time since job start (5613s) is within the limit (174528.0s)
[2026-01-09 17:27:24] 2026-01-09 08:26:44,943 | INFO     | time since job start (5615s) is within the limit (174528.0s)
[2026-01-09 17:27:24] 2026-01-09 08:26:46,789 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 17:27:24] 2026-01-09 08:26:46,793 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 4279.99055
[2026-01-09 17:27:24] 2026-01-09 08:26:46,796 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6962917711/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:27:24] 2026-01-09 08:26:46,796 | INFO     | extracted standard info from prmon json
[2026-01-09 17:27:24] 2026-01-09 08:26:46,796 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:27:24] 2026-01-09 08:26:46,796 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:27:24] 2026-01-09 08:26:46,796 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:27:24] 2026-01-09 08:26:46,796 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:27:24] 2026-01-09 08:26:46,798 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:27:24] 2026-01-09 08:26:46,798 | INFO     | sum of square deviations: 183761585.0
[2026-01-09 17:27:24] 2026-01-09 08:26:46,798 | INFO     | sum of deviations: -4285194337.5
[2026-01-09 17:27:24] 2026-01-09 08:26:46,798 | INFO     | mean x: 1767944444.5
[2026-01-09 17:27:24] 2026-01-09 08:26:46,798 | INFO     | mean y: 2477841.345238095
[2026-01-09 17:27:24] 2026-01-09 08:26:46,798 | INFO     | intersect: 41229731745.288124
[2026-01-09 17:27:24] 2026-01-09 08:26:46,798 | INFO     | chi2: 0.09565747658609036
[2026-01-09 17:27:24] 2026-01-09 08:26:46,798 | INFO     | current memory leak: -23.32 B/s (using 84 data points, chi2=0.10)
[2026-01-09 17:27:24] 2026-01-09 08:26:46,799 | INFO     | could have reported an average CPU frequency of 4270 MHz (6 samples)
[2026-01-09 17:27:24] 2026-01-09 08:26:46,802 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 17:27:24] 2026-01-09 08:26:46,948 | INFO     | time since job start (5617s) is within the limit (174528.0s)
[2026-01-09 17:27:24] 2026-01-09 08:26:48,953 | INFO     | time since job start (5619s) is within the limit (174528.0s)
[2026-01-09 17:27:24] 2026-01-09 08:26:49,301 | INFO     | monitor loop #411: job 0:6962917711 is in state 'finished'
[2026-01-09 17:27:24] 2026-01-09 08:26:49,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 17:27:24] 2026-01-09 08:26:49,758 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 17:27:24] 2026-01-09 08:26:49,761 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 2000.0048499999998
[2026-01-09 17:27:24] 2026-01-09 08:26:49,764 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6962917711/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:27:24] 2026-01-09 08:26:49,765 | INFO     | extracted standard info from prmon json
[2026-01-09 17:27:24] 2026-01-09 08:26:49,765 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:27:24] 2026-01-09 08:26:49,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:27:24] 2026-01-09 08:26:49,765 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:27:24] 2026-01-09 08:26:49,765 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:27:24] 2026-01-09 08:26:49,767 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:27:24] 2026-01-09 08:26:49,767 | INFO     | sum of square deviations: 183761585.0
[2026-01-09 17:27:24] 2026-01-09 08:26:49,768 | INFO     | sum of deviations: -4285194337.5
[2026-01-09 17:27:24] 2026-01-09 08:26:49,768 | INFO     | mean x: 1767944444.5
[2026-01-09 17:27:24] 2026-01-09 08:26:49,768 | INFO     | mean y: 2477841.345238095
[2026-01-09 17:27:24] 2026-01-09 08:26:49,768 | INFO     | intersect: 41229731745.288124
[2026-01-09 17:27:24] 2026-01-09 08:26:49,768 | INFO     | chi2: 0.09565747658609036
[2026-01-09 17:27:24] 2026-01-09 08:26:49,768 | INFO     | current memory leak: -23.32 B/s (using 84 data points, chi2=0.10)
[2026-01-09 17:27:24] 2026-01-09 08:26:49,769 | INFO     | could have reported an average CPU frequency of 3946 MHz (7 samples)
[2026-01-09 17:27:24] 2026-01-09 08:26:49,769 | INFO     | ..............................
[2026-01-09 17:27:24] 2026-01-09 08:26:49,769 | INFO     | . Timing measurements:
[2026-01-09 17:27:24] 2026-01-09 08:26:49,769 | INFO     | . get job = 0 s
[2026-01-09 17:27:24] 2026-01-09 08:26:49,769 | INFO     | . initial setup = 4 s
[2026-01-09 17:27:24] 2026-01-09 08:26:49,769 | INFO     | . payload setup = 2 s
[2026-01-09 17:27:24] 2026-01-09 08:26:49,769 | INFO     | . stage-in = 0 s
[2026-01-09 17:27:24] 2026-01-09 08:26:49,769 | INFO     | . payload execution = 5518 s
[2026-01-09 17:27:24] 2026-01-09 08:26:49,769 | INFO     | . stage-out = 0 s
[2026-01-09 17:27:24] 2026-01-09 08:26:49,769 | INFO     | . log creation = 0 s
[2026-01-09 17:27:24] 2026-01-09 08:26:49,769 | INFO     | ..............................
[2026-01-09 17:27:24] 2026-01-09 08:26:50,051 | INFO     | 
[2026-01-09 17:27:24] 2026-01-09 08:26:50,051 | INFO     | job summary report
[2026-01-09 17:27:24] 2026-01-09 08:26:50,051 | INFO     | --------------------------------------------------
[2026-01-09 17:27:24] 2026-01-09 08:26:50,051 | INFO     | PanDA job id: 6962917711
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | task id: 47898826
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | errors: (none)
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | pilot state: finished 
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | transexitcode: 0
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | exeerrorcode: 0
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | exeerrordiag: 
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | exitcode: 0
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | exitmsg: OK
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | cpuconsumptiontime: 30361 s
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | nevents: 400
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | neventsw: 0
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | pid: 2205753
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | pgrp: 2205753
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | corecount: 6
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | event service: False
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | sizes: {0: 2283798, 1: 2283997, 2: 2284259, 11: 2284287, 5525: 2319903, 5529: 2319903, 5608: 2320249}
[2026-01-09 17:27:24] 2026-01-09 08:26:50,052 | INFO     | --------------------------------------------------
[2026-01-09 17:27:24] 2026-01-09 08:26:50,053 | INFO     | 
[2026-01-09 17:27:24] 2026-01-09 08:26:50,053 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-09 17:27:24] 2026-01-09 08:26:50,066 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,067 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,067 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,067 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,067 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,067 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,067 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,067 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,067 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,067 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,067 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,068 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,068 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,068 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:27:24] 2026-01-09 08:26:50,068 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,068 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:27:24] 2026-01-09 08:26:50,068 | INFO     | job 6962917711 has completed (purged errors)
[2026-01-09 17:27:24] 2026-01-09 08:26:50,068 | INFO     | overall cleanup function is called
[2026-01-09 17:27:24] 2026-01-09 08:26:51,074 | INFO     | --- collectZombieJob: --- 10, [2205753]
[2026-01-09 17:27:24] 2026-01-09 08:26:51,074 | INFO     | zombie collector waiting for pid 2205753
[2026-01-09 17:27:24] 2026-01-09 08:26:51,074 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:27:24] 2026-01-09 08:26:51,075 | INFO     | collected zombie processes
[2026-01-09 17:27:24] 2026-01-09 08:26:51,075 | INFO     | will attempt to kill all subprocesses of pid=2205753
[2026-01-09 17:27:24] 2026-01-09 08:26:51,143 | INFO     | process IDs to be killed: [2205753] (in reverse order)
[2026-01-09 17:27:24] 2026-01-09 08:26:51,176 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:27:24] 2026-01-09 08:26:51,176 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:27:24] 2026-01-09 08:26:51,179 | INFO     | did not find any defunct processes belonging to 2205753
[2026-01-09 17:27:24] 2026-01-09 08:26:51,182 | INFO     | did not find any defunct processes belonging to 2205753
[2026-01-09 17:27:24] 2026-01-09 08:26:51,182 | INFO     | ready for new job
[2026-01-09 17:27:24] 2026-01-09 08:26:51,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:27:24] 2026-01-09 08:26:51,183 | INFO     | ***************************************
[2026-01-09 17:27:24] 2026-01-09 08:26:51,184 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:27:24] 2026-01-09 08:26:51,184 | INFO     | ***************************************
[2026-01-09 17:27:24] 2026-01-09 08:26:51,184 | INFO     | 
[2026-01-09 17:27:24] 2026-01-09 08:26:51,185 | INFO     | architecture information:
[2026-01-09 17:27:24] 2026-01-09 08:26:51,185 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:27:24] 2026-01-09 08:26:51,195 | INFO     | cat /etc/os-release:
[2026-01-09 17:27:24] NAME="CentOS Linux"
[2026-01-09 17:27:24] VERSION="7 (Core)"
[2026-01-09 17:27:24] ID="centos"
[2026-01-09 17:27:24] ID_LIKE="rhel fedora"
[2026-01-09 17:27:24] VERSION_ID="7"
[2026-01-09 17:27:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:27:24] ANSI_COLOR="0;31"
[2026-01-09 17:27:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:27:24] HOME_URL="https://www.centos.org/"
[2026-01-09 17:27:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:27:24] 
[2026-01-09 17:27:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:27:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:27:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:27:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:27:24] 
[2026-01-09 17:27:24] 2026-01-09 08:26:51,195 | INFO     | ***************************************
[2026-01-09 17:27:24] 2026-01-09 08:26:51,697 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-09 17:27:24] 2026-01-09 08:26:51,704 | INFO     | sufficient remaining disk space (277715353600 B)
[2026-01-09 17:27:24] 2026-01-09 08:26:51,705 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:27:24] 2026-01-09 08:26:51,705 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:27:24] 2026-01-09 08:26:51,705 | INFO     | update_server=False
[2026-01-09 17:27:24] 2026-01-09 08:26:51,705 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:27:24] 2026-01-09 08:26:51,705 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:27:24] 2026-01-09 08:26:51,804 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 17:27:24] 2026-01-09 08:26:51,804 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 17:27:24] 2026-01-09 08:26:51,804 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:27:24] 2026-01-09 08:26:51,804 | INFO     | will abort loop
[2026-01-09 17:27:24] 2026-01-09 08:26:51,944 | INFO     | all data control threads have been joined
[2026-01-09 17:27:24] 2026-01-09 08:26:52,325 | INFO     | all payload control threads have been joined
[2026-01-09 17:27:24] 2026-01-09 08:26:52,654 | INFO     | all job control threads have been joined
[2026-01-09 17:27:24] 2026-01-09 08:26:52,709 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:27:24] 2026-01-09 08:26:52,710 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:27:24] 2026-01-09 08:26:52,809 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:27:24] 2026-01-09 08:26:52,820 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:27:24] 2026-01-09 08:26:52,850 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:27:24] 2026-01-09 08:26:52,949 | INFO     | [data] control thread has finished
[2026-01-09 17:27:24] 2026-01-09 08:26:52,954 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:27:24] 2026-01-09 08:26:53,100 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:27:24] 2026-01-09 08:26:53,122 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:27:24] 2026-01-09 08:26:53,330 | INFO     | [payload] control thread has finished
[2026-01-09 17:27:24] 2026-01-09 08:26:53,506 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:27:24] 2026-01-09 08:26:53,581 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:27:24] 2026-01-09 08:26:53,586 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:27:24] 2026-01-09 08:26:53,659 | INFO     | [job] control thread has finished
[2026-01-09 17:27:24] 2026-01-09 08:26:54,015 | INFO     | [job] validate thread has finished
[2026-01-09 17:27:24] 2026-01-09 08:26:55,105 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:27:24] 2026-01-09 08:26:57,511 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:27:24] 2026-01-09 08:27:02,282 | INFO     | job.realtimelogging is not enabled
[2026-01-09 17:27:24] 2026-01-09 08:27:03,287 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:27:24] 2026-01-09 08:27:18,220 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:27:24] 2026-01-09 08:27:19,178 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139728656848704)>', '<ExcThread(monitor, started 139728384923392)>']
[2026-01-09 17:27:24] 2026-01-09 08:27:22,098 | INFO     | PID=2199031 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 17:27:24] 2026-01-09 08:27:22,098 | INFO     | .. there are 3 such processes running
[2026-01-09 17:27:24] 2026-01-09 08:27:22,099 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:27:24] 2026-01-09 08:27:22,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:27:24] 2026-01-09 08:27:22,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:27:24] 2026-01-09 08:27:22,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:27:24] 2026-01-09 08:27:22,099 | INFO     | [monitor] control thread has ended
[2026-01-09 17:27:24] 2026-01-09 08:27:24,203 | INFO     | all workflow threads have been joined
[2026-01-09 17:27:24] 2026-01-09 08:27:24,203 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:27:24] 2026-01-09 08:27:24,203 | INFO     | traces error code: 0
[2026-01-09 17:27:24] 2026-01-09 08:27:24,203 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:27:24] 2026-01-09 08:27:24,272 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:27:24] 2026-01-09 08:27:24,273 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:27:24] 2026-01-09 08:27:24,274 [wrapper] pilotpid: 2199031
[2026-01-09 17:27:24] 2026-01-09 08:27:24,275 [wrapper] Pilot exit status: 0
[2026-01-09 17:27:24] 2026-01-09 08:27:24,279 [wrapper] pandaids: 6962917711
[2026-01-09 17:27:24] 2026-01-09 08:27:24,290 [wrapper] cleanup supervisor_pilot 2265407 2199032
[2026-01-09 17:27:24] 2026-01-09 08:27:24,291 [wrapper] Test setup, not cleaning
[2026-01-09 17:27:24] 2026-01-09 08:27:24,292 [wrapper] apfmon messages muted
[2026-01-09 17:27:24] 2026-01-09 08:27:24,293 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:27:24] 2026-01-09 08:27:24,294 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:27:24]  *** Error codes and diagnostics ***
[2026-01-09 17:27:24]     "exeErrorCode": 0,
[2026-01-09 17:27:24]     "exeErrorDiag": "",
[2026-01-09 17:27:24]     "pilotErrorCode": 0,
[2026-01-09 17:27:24]     "pilotErrorDiag": "",
[2026-01-09 17:27:24]  *** Listing of results directory ***
[2026-01-09 17:27:24] total 434084
[2026-01-09 17:27:24] -rwx------. 1 boinc boinc     36322 Jan  8 17:06 runpilot2-wrapper.sh
[2026-01-09 17:27:24] -rw-r--r--. 1 boinc boinc    579449 Jan  8 17:10 pilot3.tar.gz
[2026-01-09 17:27:24] -rw-r--r--. 1 boinc boinc      5112 Jan  8 17:10 queuedata.json
[2026-01-09 17:27:24] -rw-r--r--. 1 boinc boinc       100 Jan  9 15:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:27:24] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 15:53 run_atlas
[2026-01-09 17:27:24] -rw-r--r--. 1 boinc boinc       105 Jan  9 15:53 job.xml
[2026-01-09 17:27:24] -rw-r--r--. 2 boinc boinc     15847 Jan  9 15:53 start_atlas.sh
[2026-01-09 17:27:24] drwxrwx--x. 2 boinc boinc        68 Jan  9 15:53 shared
[2026-01-09 17:27:24] -rw-r--r--. 2 boinc boinc    592397 Jan  9 15:53 input.tar.gz
[2026-01-09 17:27:24] -rw-r--r--. 1 boinc boinc      9525 Jan  9 15:53 init_data.xml
[2026-01-09 17:27:24] -rw-r--r--. 2 boinc boinc 223262174 Jan  9 15:53 EVNT.47898824._000657.pool.root.1
[2026-01-09 17:27:24] -rw-r--r--. 1 boinc boinc         0 Jan  9 15:53 boinc_lockfile
[2026-01-09 17:27:24] -rw-r--r--. 1 boinc boinc      2519 Jan  9 15:53 pandaJob.out
[2026-01-09 17:27:24] -rw-------. 1 boinc boinc    989771 Jan  9 15:53 agis_schedconf.cvmfs.json
[2026-01-09 17:27:24] -rw-------. 1 boinc boinc   1516240 Jan  9 15:53 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:27:24] drwx------. 5 boinc boinc      4096 Jan  9 15:53 pilot3
[2026-01-09 17:27:24] -rw-------. 1 boinc boinc 215057030 Jan  9 17:25 HITS.47898826._019872.pool.root.1
[2026-01-09 17:27:24] -rw-r--r--. 1 boinc boinc       529 Jan  9 17:25 boinc_task_state.xml
[2026-01-09 17:27:24] -rw-------. 1 boinc boinc      1021 Jan  9 17:25 memory_monitor_summary.json
[2026-01-09 17:27:24] -rw-------. 1 boinc boinc    319288 Jan  9 17:25 log.47898826._019872.job.log.tgz.1
[2026-01-09 17:27:24] -rw-------. 1 boinc boinc      7760 Jan  9 17:26 heartbeat.json
[2026-01-09 17:27:24] -rw-r--r--. 1 boinc boinc      8192 Jan  9 17:27 boinc_mmap_file
[2026-01-09 17:27:24] -rw-r--r--. 1 boinc boinc        27 Jan  9 17:27 wrapper_checkpoint.txt
[2026-01-09 17:27:24] -rw-------. 1 boinc boinc        95 Jan  9 17:27 pilot_heartbeat.json
[2026-01-09 17:27:24] -rw-------. 1 boinc boinc      5082 Jan  9 17:27 pilotlog.txt
[2026-01-09 17:27:24] -rw-------. 1 boinc boinc    819421 Jan  9 17:27 log.47898826._019872.job.log.1
[2026-01-09 17:27:24] -rw-------. 1 boinc boinc       357 Jan  9 17:27 output.list
[2026-01-09 17:27:24] -rw-r--r--. 1 boinc boinc       620 Jan  9 17:27 runtime_log
[2026-01-09 17:27:24] -rw-------. 1 boinc boinc   1157120 Jan  9 17:27 result.tar.gz
[2026-01-09 17:27:24] -rw-r--r--. 1 boinc boinc      8775 Jan  9 17:27 runtime_log.err
[2026-01-09 17:27:24] -rw-------. 1 boinc boinc       643 Jan  9 17:27 PeOLDmND0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhdeKDmjQVBzn.diag
[2026-01-09 17:27:24] -rw-r--r--. 1 boinc boinc     21645 Jan  9 17:27 stderr.txt
[2026-01-09 17:27:24] HITS file was successfully produced:
[2026-01-09 17:27:24] -rw-------. 1 boinc boinc 215057030 Jan  9 17:25 shared/HITS.pool.root.1
[2026-01-09 17:27:24]  *** Contents of shared directory: ***
[2026-01-09 17:27:24] total 429780
[2026-01-09 17:27:24] -rw-r--r--. 2 boinc boinc     15847 Jan  9 15:53 start_atlas.sh
[2026-01-09 17:27:24] -rw-r--r--. 2 boinc boinc    592397 Jan  9 15:53 input.tar.gz
[2026-01-09 17:27:24] -rw-r--r--. 2 boinc boinc 223262174 Jan  9 15:53 ATLAS.root_0
[2026-01-09 17:27:24] -rw-------. 1 boinc boinc 215057030 Jan  9 17:25 HITS.pool.root.1
[2026-01-09 17:27:24] -rw-------. 1 boinc boinc   1157120 Jan  9 17:27 result.tar.gz
17:27:25 (2195251): run_atlas exited; CPU time 30406.580986
17:27:25 (2195251): called boinc_finish(0)

</stderr_txt>
]]>

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