Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:37:11 (902784): wrapper (7.7.26015): starting
08:37:11 (902784): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 08:37:11] Arguments: --nthreads 8
[2026-01-09 08:37:11] Threads: 8
[2026-01-09 08:37:11] Checking for CVMFS
[2026-01-09 08:37:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:37:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:37:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:37:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:37:12] 2.13.3.0 10954 93477 395984 154945 2 135 23329796 32935937 9351 16776704 26 361225231 99.472 529007597 38303 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 08:37:12] CVMFS is ok
[2026-01-09 08:37:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:37:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 08:37:12] Further information can be found at the LHC@home message board.
[2026-01-09 08:37:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:37:12] Checking for apptainer binary...
[2026-01-09 08:37:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:37:12] Running /usr/bin/apptainer --version
[2026-01-09 08:37:12] apptainer version 1.4.5-2.el9
[2026-01-09 08:37:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:37:13] c7-11-13.aglt2.org
[2026-01-09 08:37:13] apptainer works
[2026-01-09 08:37:13] Set ATHENA_PROC_NUMBER=8
[2026-01-09 08:37:13] Set ATHENA_CORE_NUMBER=8
[2026-01-09 08:37:13] Starting ATLAS job with PandaID=6963153058
[2026-01-09 08:37:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:28:50]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:28:50] 2026-01-09 21:27:55,219 | INFO     | monitor loop #1960: job 0:6963153058 is in state 'finished'
[2026-01-09 16:28:50] 2026-01-09 21:27:55,219 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:28:50] 2026-01-09 21:27:56,476 | INFO     | time since job start (28199s) is within the limit (349056.0s)
[2026-01-09 16:28:50] 2026-01-09 21:27:57,725 | INFO     | monitor loop #1961: job 0:6963153058 is in state 'finished'
[2026-01-09 16:28:50] 2026-01-09 21:27:57,725 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:28:50] 2026-01-09 21:27:58,483 | INFO     | time since job start (28201s) is within the limit (349056.0s)
[2026-01-09 16:28:50] 2026-01-09 21:28:00,232 | INFO     | monitor loop #1962: job 0:6963153058 is in state 'finished'
[2026-01-09 16:28:50] 2026-01-09 21:28:00,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:28:50] 2026-01-09 21:28:00,488 | INFO     | time since job start (28203s) is within the limit (349056.0s)
[2026-01-09 16:28:50] 2026-01-09 21:28:00,955 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 16:28:50] 2026-01-09 21:28:00,963 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3290.9667187500004
[2026-01-09 16:28:50] 2026-01-09 21:28:00,972 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963153058/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:28:50] 2026-01-09 21:28:00,973 | INFO     | extracted standard info from prmon json
[2026-01-09 16:28:50] 2026-01-09 21:28:00,973 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:28:50] 2026-01-09 21:28:00,973 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:28:50] 2026-01-09 21:28:00,973 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:28:50] 2026-01-09 21:28:00,973 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:28:50] 2026-01-09 21:28:00,979 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:28:50] 2026-01-09 21:28:00,980 | INFO     | sum of square deviations: 30378019024.225536
[2026-01-09 16:28:50] 2026-01-09 21:28:00,984 | INFO     | sum of deviations: 21414832309.685493
[2026-01-09 16:28:50] 2026-01-09 21:28:00,984 | INFO     | mean x: 1767980019.3600867
[2026-01-09 16:28:50] 2026-01-09 21:28:00,984 | INFO     | mean y: 2534384.863340564
[2026-01-09 16:28:50] 2026-01-09 21:28:00,984 | INFO     | intersect: -1243794271.764262
[2026-01-09 16:28:50] 2026-01-09 21:28:00,985 | INFO     | chi2: 3.9688484827852766
[2026-01-09 16:28:50] 2026-01-09 21:28:00,985 | INFO     | sum of square deviations: 29400265273.570198
[2026-01-09 16:28:50] 2026-01-09 21:28:00,989 | INFO     | sum of deviations: 51963009992.28071
[2026-01-09 16:28:50] 2026-01-09 21:28:00,989 | INFO     | mean x: 1767979866.8640351
[2026-01-09 16:28:50] 2026-01-09 21:28:00,989 | INFO     | mean y: 2539106.456140351
[2026-01-09 16:28:50] 2026-01-09 21:28:00,989 | INFO     | intersect: -3122247511.3909597
[2026-01-09 16:28:50] 2026-01-09 21:28:00,990 | INFO     | chi2: 3.206773290718203
[2026-01-09 16:28:50] 2026-01-09 21:28:00,990 | INFO     | current chi2=3.206773290718203 (change=19.201418128521276 %)
[2026-01-09 16:28:50] 2026-01-09 21:28:00,990 | INFO     | right removable region: 455
[2026-01-09 16:28:50] 2026-01-09 21:28:00,990 | INFO     | sum of square deviations: 29400164013.57017
[2026-01-09 16:28:50] 2026-01-09 21:28:00,994 | INFO     | sum of deviations: -101729710151.53934
[2026-01-09 16:28:50] 2026-01-09 21:28:00,994 | INFO     | mean x: 1767980171.8640351
[2026-01-09 16:28:50] 2026-01-09 21:28:00,995 | INFO     | mean y: 2553558.2171052634
[2026-01-09 16:28:50] 2026-01-09 21:28:00,995 | INFO     | intersect: 6120074207.230532
[2026-01-09 16:28:50] 2026-01-09 21:28:00,995 | INFO     | chi2: 1.2952778457853353
[2026-01-09 16:28:50] 2026-01-09 21:28:00,995 | INFO     | current chi2=1.2952778457853353 (change=67.36388775223968 %)
[2026-01-09 16:28:50] 2026-01-09 21:28:00,995 | INFO     | sum of square deviations: 28443546274.63418
[2026-01-09 16:28:50] 2026-01-09 21:28:00,999 | INFO     | sum of deviations: -113015192220.60995
[2026-01-09 16:28:50] 2026-01-09 21:28:00,999 | INFO     | mean x: 1767980324.3658535
[2026-01-09 16:28:50] 2026-01-09 21:28:00,999 | INFO     | mean y: 2555346.3370288247
[2026-01-09 16:28:50] 2026-01-09 21:28:00,999 | INFO     | intersect: 7027299528.06558
[2026-01-09 16:28:50] 2026-01-09 21:28:01,000 | INFO     | chi2: 1.241737563220192
[2026-01-09 16:28:50] 2026-01-09 21:28:01,000 | INFO     | current chi2=1.241737563220192 (change=4.133497900806109 %)
[2026-01-09 16:28:50] 2026-01-09 21:28:01,000 | INFO     | left removable region: 20
[2026-01-09 16:28:50] 2026-01-09 21:28:01,000 | INFO     | sum of square deviations: 25522331911.41147
[2026-01-09 16:28:50] 2026-01-09 21:28:01,004 | INFO     | sum of deviations: -40654733345.83912
[2026-01-09 16:28:50] 2026-01-09 21:28:01,004 | INFO     | mean x: 1767980446.370115
[2026-01-09 16:28:50] 2026-01-09 21:28:01,004 | INFO     | mean y: 2553461.7816091953
[2026-01-09 16:28:50] 2026-01-09 21:28:01,004 | INFO     | intersect: 2818784120.3797493
[2026-01-09 16:28:50] 2026-01-09 21:28:01,004 | INFO     | chi2: 0.35125331942235805
[2026-01-09 16:28:50] 2026-01-09 21:28:01,004 | INFO     | current memory leak: -1.59 B/s (using 435 data points, chi2=0.35)
[2026-01-09 16:28:50] 2026-01-09 21:28:01,005 | INFO     | could have reported an average CPU frequency of 3291 MHz (19 samples)
[2026-01-09 16:28:50] 2026-01-09 21:28:01,005 | INFO     | ..............................
[2026-01-09 16:28:50] 2026-01-09 21:28:01,005 | INFO     | . Timing measurements:
[2026-01-09 16:28:50] 2026-01-09 21:28:01,005 | INFO     | . get job = 0 s
[2026-01-09 16:28:50] 2026-01-09 21:28:01,005 | INFO     | . initial setup = 3 s
[2026-01-09 16:28:50] 2026-01-09 21:28:01,005 | INFO     | . payload setup = 26 s
[2026-01-09 16:28:50] 2026-01-09 21:28:01,005 | INFO     | . stage-in = 0 s
[2026-01-09 16:28:50] 2026-01-09 21:28:01,005 | INFO     | . payload execution = 28096 s
[2026-01-09 16:28:50] 2026-01-09 21:28:01,005 | INFO     | . stage-out = 2 s
[2026-01-09 16:28:50] 2026-01-09 21:28:01,005 | INFO     | . log creation = 0 s
[2026-01-09 16:28:50] 2026-01-09 21:28:01,006 | INFO     | ..............................
[2026-01-09 16:28:50] 2026-01-09 21:28:01,078 | INFO     | 
[2026-01-09 16:28:50] 2026-01-09 21:28:01,078 | INFO     | job summary report
[2026-01-09 16:28:50] 2026-01-09 21:28:01,078 | INFO     | --------------------------------------------------
[2026-01-09 16:28:50] 2026-01-09 21:28:01,078 | INFO     | PanDA job id: 6963153058
[2026-01-09 16:28:50] 2026-01-09 21:28:01,078 | INFO     | task id: 47898826
[2026-01-09 16:28:50] 2026-01-09 21:28:01,078 | INFO     | errors: (none)
[2026-01-09 16:28:50] 2026-01-09 21:28:01,078 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:28:50] 2026-01-09 21:28:01,078 | INFO     | pilot state: finished 
[2026-01-09 16:28:50] 2026-01-09 21:28:01,078 | INFO     | transexitcode: 0
[2026-01-09 16:28:50] 2026-01-09 21:28:01,078 | INFO     | exeerrorcode: 0
[2026-01-09 16:28:50] 2026-01-09 21:28:01,078 | INFO     | exeerrordiag: 
[2026-01-09 16:28:50] 2026-01-09 21:28:01,078 | INFO     | exitcode: 0
[2026-01-09 16:28:50] 2026-01-09 21:28:01,078 | INFO     | exitmsg: OK
[2026-01-09 16:28:50] 2026-01-09 21:28:01,078 | INFO     | cpuconsumptiontime: 48088 s
[2026-01-09 16:28:50] 2026-01-09 21:28:01,078 | INFO     | nevents: 400
[2026-01-09 16:28:50] 2026-01-09 21:28:01,079 | INFO     | neventsw: 0
[2026-01-09 16:28:50] 2026-01-09 21:28:01,079 | INFO     | pid: 914061
[2026-01-09 16:28:50] 2026-01-09 21:28:01,079 | INFO     | pgrp: 914061
[2026-01-09 16:28:50] 2026-01-09 21:28:01,079 | INFO     | corecount: 8
[2026-01-09 16:28:50] 2026-01-09 21:28:01,079 | INFO     | event service: False
[2026-01-09 16:28:50] 2026-01-09 21:28:01,079 | INFO     | sizes: {0: 2283142, 1: 2283998, 2: 2283998, 12: 2284026, 23: 2284054, 26: 2284344, 34: 2284500, 28126: 2321545, 28129: 2330543, 28131: 2330599, 28144: 2330793}
[2026-01-09 16:28:50] 2026-01-09 21:28:01,079 | INFO     | --------------------------------------------------
[2026-01-09 16:28:50] 2026-01-09 21:28:01,079 | INFO     | 
[2026-01-09 16:28:50] 2026-01-09 21:28:01,079 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 16:28:50] 2026-01-09 21:28:01,117 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:28:50] 2026-01-09 21:28:01,118 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,119 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:28:50] 2026-01-09 21:28:01,119 | INFO     | job 6963153058 has completed (purged errors)
[2026-01-09 16:28:50] 2026-01-09 21:28:01,119 | INFO     | overall cleanup function is called
[2026-01-09 16:28:50] 2026-01-09 21:28:02,128 | INFO     | --- collectZombieJob: --- 10, [914061]
[2026-01-09 16:28:50] 2026-01-09 21:28:02,128 | INFO     | zombie collector waiting for pid 914061
[2026-01-09 16:28:50] 2026-01-09 21:28:02,128 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:28:50] 2026-01-09 21:28:02,128 | INFO     | collected zombie processes
[2026-01-09 16:28:50] 2026-01-09 21:28:02,128 | INFO     | will attempt to kill all subprocesses of pid=914061
[2026-01-09 16:28:50] 2026-01-09 21:28:02,382 | INFO     | process IDs to be killed: [914061] (in reverse order)
[2026-01-09 16:28:50] 2026-01-09 21:28:02,475 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:28:50] 2026-01-09 21:28:02,476 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:28:50] 2026-01-09 21:28:02,486 | INFO     | did not find any defunct processes belonging to 914061
[2026-01-09 16:28:50] 2026-01-09 21:28:02,497 | INFO     | did not find any defunct processes belonging to 914061
[2026-01-09 16:28:50] 2026-01-09 21:28:02,497 | INFO     | ready for new job
[2026-01-09 16:28:50] 2026-01-09 21:28:02,497 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:28:50] 2026-01-09 21:28:02,499 | INFO     | ***************************************
[2026-01-09 16:28:50] 2026-01-09 21:28:02,499 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:28:50] 2026-01-09 21:28:02,500 | INFO     | ***************************************
[2026-01-09 16:28:50] 2026-01-09 21:28:02,500 | INFO     | 
[2026-01-09 16:28:50] 2026-01-09 21:28:02,503 | INFO     | architecture information:
[2026-01-09 16:28:50] 2026-01-09 21:28:02,503 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:28:50] 2026-01-09 21:28:02,520 | INFO     | cat /etc/os-release:
[2026-01-09 16:28:50] NAME="CentOS Linux"
[2026-01-09 16:28:50] VERSION="7 (Core)"
[2026-01-09 16:28:50] ID="centos"
[2026-01-09 16:28:50] ID_LIKE="rhel fedora"
[2026-01-09 16:28:50] VERSION_ID="7"
[2026-01-09 16:28:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:28:50] ANSI_COLOR="0;31"
[2026-01-09 16:28:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:28:50] HOME_URL="https://www.centos.org/"
[2026-01-09 16:28:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:28:50] 
[2026-01-09 16:28:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:28:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:28:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:28:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:28:50] 
[2026-01-09 16:28:50] 2026-01-09 21:28:02,520 | INFO     | ***************************************
[2026-01-09 16:28:50] 2026-01-09 21:28:03,024 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 16:28:50] 2026-01-09 21:28:03,129 | INFO     | sufficient remaining disk space (94904516608 B)
[2026-01-09 16:28:50] 2026-01-09 21:28:03,129 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:28:50] 2026-01-09 21:28:03,129 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:28:50] 2026-01-09 21:28:03,129 | INFO     | update_server=False
[2026-01-09 16:28:50] 2026-01-09 21:28:03,129 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:28:50] 2026-01-09 21:28:03,134 | INFO     | all payload control threads have been joined
[2026-01-09 16:28:50] 2026-01-09 21:28:03,141 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:28:50] 2026-01-09 21:28:03,235 | INFO     | all job control threads have been joined
[2026-01-09 16:28:50] 2026-01-09 21:28:03,371 | INFO     | all data control threads have been joined
[2026-01-09 16:28:50] 2026-01-09 21:28:03,653 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:28:50] 2026-01-09 21:28:03,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:28:50] 2026-01-09 21:28:03,749 | INFO     | aborting loop
[2026-01-09 16:28:50] 2026-01-09 21:28:04,135 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:28:50] 2026-01-09 21:28:04,140 | INFO     | [payload] control thread has finished
[2026-01-09 16:28:50] 2026-01-09 21:28:04,185 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:28:50] 2026-01-09 21:28:04,241 | INFO     | [job] control thread has finished
[2026-01-09 16:28:50] 2026-01-09 21:28:04,274 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:28:50] 2026-01-09 21:28:04,377 | INFO     | [data] control thread has finished
[2026-01-09 16:28:50] 2026-01-09 21:28:04,426 | INFO     | [job] validate thread has finished
[2026-01-09 16:28:50] 2026-01-09 21:28:04,755 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:28:50] 2026-01-09 21:28:04,835 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:28:50] 2026-01-09 21:28:04,852 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:28:50] 2026-01-09 21:28:04,903 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:28:50] 2026-01-09 21:28:05,334 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:28:50] 2026-01-09 21:28:05,453 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:28:50] 2026-01-09 21:28:05,660 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:28:50] 2026-01-09 21:28:06,104 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:28:50] 2026-01-09 21:28:07,109 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:28:50] 2026-01-09 21:28:07,152 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:28:50] 2026-01-09 21:28:33,880 | INFO     | PID=906550 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 16:28:50] 2026-01-09 21:28:33,880 | INFO     | .. there are 11 such processes running
[2026-01-09 16:28:50] 2026-01-09 21:28:33,880 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:28:50] 2026-01-09 21:28:33,880 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:28:50] 2026-01-09 21:28:33,880 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:28:50] 2026-01-09 21:28:43,560 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:28:50] 2026-01-09 21:28:45,264 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139966003525440)>', '<ExcThread(monitor, started 139964998219520)>']
[2026-01-09 16:28:50] 2026-01-09 21:28:45,943 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:28:50] 2026-01-09 21:28:45,943 | INFO     | [monitor] control thread has ended
[2026-01-09 16:28:50] 2026-01-09 21:28:50,291 | INFO     | all workflow threads have been joined
[2026-01-09 16:28:50] 2026-01-09 21:28:50,291 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:28:50] 2026-01-09 21:28:50,292 | INFO     | traces error code: 0
[2026-01-09 16:28:50] 2026-01-09 21:28:50,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:28:50] 2026-01-09 21:28:50,437 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:28:50] 2026-01-09 21:28:50,440 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:28:50] 2026-01-09 21:28:50,442 [wrapper] pilotpid: 906550
[2026-01-09 16:28:50] 2026-01-09 21:28:50,444 [wrapper] Pilot exit status: 0
[2026-01-09 16:28:50] 2026-01-09 21:28:50,484 [wrapper] pandaids: 6963153058
[2026-01-09 16:28:50] 2026-01-09 21:28:50,572 [wrapper] cleanup supervisor_pilot 1682375 906551
[2026-01-09 16:28:50] 2026-01-09 21:28:50,575 [wrapper] Test setup, not cleaning
[2026-01-09 16:28:50] 2026-01-09 21:28:50,577 [wrapper] apfmon messages muted
[2026-01-09 16:28:50] 2026-01-09 21:28:50,580 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:28:50] 2026-01-09 21:28:50,582 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:28:50]  *** Error codes and diagnostics ***
[2026-01-09 16:28:50]     "exeErrorCode": 0,
[2026-01-09 16:28:50]     "exeErrorDiag": "",
[2026-01-09 16:28:50]     "pilotErrorCode": 0,
[2026-01-09 16:28:50]     "pilotErrorDiag": "",
[2026-01-09 16:28:50]  *** Listing of results directory ***
[2026-01-09 16:28:50] total 447796
[2026-01-09 16:28:50] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 16:28:50] -rwx------. 1 boincer umatlas     36322 Jan  8 11:07 runpilot2-wrapper.sh
[2026-01-09 16:28:50] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 16:28:50] -rw-r--r--. 1 boincer umatlas       100 Jan  9 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:28:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 08:37 run_atlas
[2026-01-09 16:28:50] -rw-r--r--. 1 boincer umatlas       105 Jan  9 08:37 job.xml
[2026-01-09 16:28:50] -rw-r--r--. 2 boincer umatlas 224987916 Jan  9 08:37 EVNT.47898824._001151.pool.root.1
[2026-01-09 16:28:50] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 08:37 input.tar.gz
[2026-01-09 16:28:50] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 08:37 start_atlas.sh
[2026-01-09 16:28:50] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 08:37 shared
[2026-01-09 16:28:50] -rw-r--r--. 1 boincer umatlas         0 Jan  9 08:37 boinc_lockfile
[2026-01-09 16:28:50] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 08:37 pandaJob.out
[2026-01-09 16:28:50] -rw-------. 1 boincer umatlas        57 Jan  9 08:37 setup.sh.local
[2026-01-09 16:28:50] -rw-------. 1 boincer umatlas    989377 Jan  9 08:37 agis_schedconf.cvmfs.json
[2026-01-09 16:28:50] drwx------. 5 boincer umatlas      4096 Jan  9 08:37 pilot3
[2026-01-09 16:28:50] -rw-r--r--. 1 boincer umatlas      6904 Jan  9 16:20 init_data.xml
[2026-01-09 16:28:50] -rw-------. 1 boincer umatlas 220725269 Jan  9 16:26 HITS.47898826._029753.pool.root.1
[2026-01-09 16:28:50] -rw-r--r--. 1 boincer umatlas       531 Jan  9 16:26 boinc_task_state.xml
[2026-01-09 16:28:50] -rw-------. 1 boincer umatlas      1030 Jan  9 16:27 memory_monitor_summary.json
[2026-01-09 16:28:50] -rw-------. 1 boincer umatlas   1516240 Jan  9 16:27 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:28:50] -rw-------. 1 boincer umatlas    642580 Jan  9 16:27 log.47898826._029753.job.log.tgz.1
[2026-01-09 16:28:50] -rw-------. 1 boincer umatlas        95 Jan  9 16:27 pilot_heartbeat.json
[2026-01-09 16:28:50] -rw-------. 1 boincer umatlas      7775 Jan  9 16:28 heartbeat.json
[2026-01-09 16:28:50] -rw-r--r--. 1 boincer umatlas        28 Jan  9 16:28 wrapper_checkpoint.txt
[2026-01-09 16:28:50] -rw-------. 1 boincer umatlas      4823 Jan  9 16:28 pilotlog.txt
[2026-01-09 16:28:50] -rw-------. 1 boincer umatlas   3813303 Jan  9 16:28 log.47898826._029753.job.log.1
[2026-01-09 16:28:50] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 16:28 boinc_mmap_file
[2026-01-09 16:28:50] -rw-------. 1 boincer umatlas       357 Jan  9 16:28 output.list
[2026-01-09 16:28:50] -rw-r--r--. 1 boincer umatlas       620 Jan  9 16:28 runtime_log
[2026-01-09 16:28:50] -rw-------. 1 boincer umatlas   4474880 Jan  9 16:28 result.tar.gz
[2026-01-09 16:28:50] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 16:28 runtime_log.err
[2026-01-09 16:28:50] -rw-------. 1 boincer umatlas       656 Jan  9 16:28 Q9SMDmbi7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm07kKDmNvX2om.diag
[2026-01-09 16:28:50] -rw-r--r--. 1 boincer umatlas     21444 Jan  9 16:28 stderr.txt
[2026-01-09 16:28:51] HITS file was successfully produced:
[2026-01-09 16:28:51] -rw-------. 1 boincer umatlas 220725269 Jan  9 16:26 shared/HITS.pool.root.1
[2026-01-09 16:28:51]  *** Contents of shared directory: ***
[2026-01-09 16:28:51] total 440248
[2026-01-09 16:28:51] -rw-r--r--. 2 boincer umatlas 224987916 Jan  9 08:37 ATLAS.root_0
[2026-01-09 16:28:51] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 08:37 input.tar.gz
[2026-01-09 16:28:51] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 08:37 start_atlas.sh
[2026-01-09 16:28:51] -rw-------. 1 boincer umatlas 220725269 Jan  9 16:26 HITS.pool.root.1
[2026-01-09 16:28:51] -rw-------. 1 boincer umatlas   4474880 Jan  9 16:28 result.tar.gz
16:29:12 (902784): run_atlas exited; CPU time 48659.748589
16:29:12 (902784): called boinc_finish(0)

</stderr_txt>
]]>

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