Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:52:28 (753021): wrapper (7.7.26015): starting
08:52:28 (753021): wrapper: running run_atlas (--nthreads 10)
[2026-01-09 08:52:28] Arguments: --nthreads 10
[2026-01-09 08:52:28] Threads: 10
[2026-01-09 08:52:28] Checking for CVMFS
[2026-01-09 08:52:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:52:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:52:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:52:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:52:31] 2.13.3.0 6778 21593 165264 154945 1 105 40031534 40960000 8370 16776704 0 11786466 99.554 18032267 33579 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 08:52:31] CVMFS is ok
[2026-01-09 08:52:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:52:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 08:52:31] Further information can be found at the LHC@home message board.
[2026-01-09 08:52:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:52:31] Checking for apptainer binary...
[2026-01-09 08:52:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:52:31] Running /usr/bin/apptainer --version
[2026-01-09 08:52:31] apptainer version 1.4.5-2.el9
[2026-01-09 08:52:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:52:33] c-211-9.aglt2.org
[2026-01-09 08:52:33] apptainer works
[2026-01-09 08:52:33] Set ATHENA_PROC_NUMBER=10
[2026-01-09 08:52:33] Set ATHENA_CORE_NUMBER=10
[2026-01-09 08:52:33] Starting ATLAS job with PandaID=6963149008
[2026-01-09 08:52:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:37:44]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:37:44] 2026-01-09 17:36:43,426 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:37:44] 2026-01-09 17:36:44,834 | INFO     | PID=756876 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 12:37:44] 2026-01-09 17:36:44,834 | INFO     | .. there are 8 such processes running
[2026-01-09 12:37:44] 2026-01-09 17:36:45,837 | INFO     | time since job start (13410s) is within the limit (349056.0s)
[2026-01-09 12:37:44] 2026-01-09 17:36:45,950 | INFO     | monitor loop #912: job 0:6963149008 is in state 'finished'
[2026-01-09 12:37:44] 2026-01-09 17:36:45,950 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:37:44] 2026-01-09 17:36:47,660 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 12:37:44] 2026-01-09 17:36:47,674 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2624.6900000000005
[2026-01-09 12:37:44] 2026-01-09 17:36:47,683 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963149008/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:37:44] 2026-01-09 17:36:47,684 | INFO     | extracted standard info from prmon json
[2026-01-09 12:37:44] 2026-01-09 17:36:47,684 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:37:44] 2026-01-09 17:36:47,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:37:44] 2026-01-09 17:36:47,685 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:37:44] 2026-01-09 17:36:47,685 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:37:44] 2026-01-09 17:36:47,690 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:37:44] 2026-01-09 17:36:47,690 | INFO     | sum of square deviations: 3213233152.555039
[2026-01-09 12:37:44] 2026-01-09 17:36:47,692 | INFO     | sum of deviations: 29974599945.88076
[2026-01-09 12:37:44] 2026-01-09 17:36:47,692 | INFO     | mean x: 1767973546.3348625
[2026-01-09 12:37:44] 2026-01-09 17:36:47,692 | INFO     | mean y: 2584348.357798165
[2026-01-09 12:37:44] 2026-01-09 17:36:47,692 | INFO     | intersect: -16489931834.026468
[2026-01-09 12:37:44] 2026-01-09 17:36:47,693 | INFO     | chi2: 2.9287974683617186
[2026-01-09 12:37:44] 2026-01-09 17:36:47,693 | INFO     | sum of square deviations: 2997183549.220656
[2026-01-09 12:37:44] 2026-01-09 17:36:47,695 | INFO     | sum of deviations: 43095431176.20188
[2026-01-09 12:37:44] 2026-01-09 17:36:47,695 | INFO     | mean x: 1767973393.8215961
[2026-01-09 12:37:44] 2026-01-09 17:36:47,695 | INFO     | mean y: 2593424.3474178403
[2026-01-09 12:37:44] 2026-01-09 17:36:47,695 | INFO     | intersect: -25418464199.769863
[2026-01-09 12:37:44] 2026-01-09 17:36:47,696 | INFO     | chi2: 2.249747290707581
[2026-01-09 12:37:44] 2026-01-09 17:36:47,696 | INFO     | current chi2=2.249747290707581 (change=23.18528969618299 %)
[2026-01-09 12:37:44] 2026-01-09 17:36:47,696 | INFO     | right removable region: 212
[2026-01-09 12:37:44] 2026-01-09 17:36:47,696 | INFO     | sum of square deviations: 2997164286.488258
[2026-01-09 12:37:44] 2026-01-09 17:36:47,698 | INFO     | sum of deviations: -17835864703.887325
[2026-01-09 12:37:44] 2026-01-09 17:36:47,698 | INFO     | mean x: 1767973698.85446
[2026-01-09 12:37:44] 2026-01-09 17:36:47,698 | INFO     | mean y: 2617868.1971830986
[2026-01-09 12:37:44] 2026-01-09 17:36:47,698 | INFO     | intersect: 10523676001.365662
[2026-01-09 12:37:44] 2026-01-09 17:36:47,699 | INFO     | chi2: 0.8663970481147041
[2026-01-09 12:37:44] 2026-01-09 17:36:47,699 | INFO     | current chi2=0.8663970481147041 (change=70.41799381917177 %)
[2026-01-09 12:37:44] 2026-01-09 17:36:47,699 | INFO     | sum of square deviations: 2791028080.230759
[2026-01-09 12:37:44] 2026-01-09 17:36:47,701 | INFO     | sum of deviations: -21331743601.67308
[2026-01-09 12:37:44] 2026-01-09 17:36:47,701 | INFO     | mean x: 1767973851.3653846
[2026-01-09 12:37:44] 2026-01-09 17:36:47,701 | INFO     | mean y: 2620428.3509615385
[2026-01-09 12:37:44] 2026-01-09 17:36:47,701 | INFO     | intersect: 13515191354.785606
[2026-01-09 12:37:44] 2026-01-09 17:36:47,702 | INFO     | chi2: 0.8458878741659904
[2026-01-09 12:37:44] 2026-01-09 17:36:47,702 | INFO     | current chi2=0.8458878741659904 (change=2.3671795735387136 %)
[2026-01-09 12:37:44] 2026-01-09 17:36:47,702 | INFO     | left removable region: 20
[2026-01-09 12:37:44] 2026-01-09 17:36:47,702 | INFO     | sum of square deviations: 2195252463.2448053
[2026-01-09 12:37:44] 2026-01-09 17:36:47,704 | INFO     | sum of deviations: 4206867388.43229
[2026-01-09 12:37:44] 2026-01-09 17:36:47,704 | INFO     | mean x: 1767973973.3802083
[2026-01-09 12:37:44] 2026-01-09 17:36:47,704 | INFO     | mean y: 2620512.6927083335
[2026-01-09 12:37:44] 2026-01-09 17:36:47,704 | INFO     | intersect: -3385432650.548791
[2026-01-09 12:37:44] 2026-01-09 17:36:47,705 | INFO     | chi2: 0.047316680598913634
[2026-01-09 12:37:44] 2026-01-09 17:36:47,705 | INFO     | current memory leak: 1.92 B/s (using 192 data points, chi2=0.05)
[2026-01-09 12:37:44] 2026-01-09 17:36:47,705 | INFO     | could have reported an average CPU frequency of 2639 MHz (11 samples)
[2026-01-09 12:37:44] 2026-01-09 17:36:47,706 | INFO     | ..............................
[2026-01-09 12:37:44] 2026-01-09 17:36:47,706 | INFO     | . Timing measurements:
[2026-01-09 12:37:44] 2026-01-09 17:36:47,706 | INFO     | . get job = 0 s
[2026-01-09 12:37:44] 2026-01-09 17:36:47,706 | INFO     | . initial setup = 5 s
[2026-01-09 12:37:44] 2026-01-09 17:36:47,706 | INFO     | . payload setup = 42 s
[2026-01-09 12:37:44] 2026-01-09 17:36:47,706 | INFO     | . stage-in = 0 s
[2026-01-09 12:37:44] 2026-01-09 17:36:47,707 | INFO     | . payload execution = 13279 s
[2026-01-09 12:37:44] 2026-01-09 17:36:47,707 | INFO     | . stage-out = 4 s
[2026-01-09 12:37:44] 2026-01-09 17:36:47,707 | INFO     | . log creation = 0 s
[2026-01-09 12:37:44] 2026-01-09 17:36:47,707 | INFO     | ..............................
[2026-01-09 12:37:44] 2026-01-09 17:36:47,846 | INFO     | time since job start (13412s) is within the limit (349056.0s)
[2026-01-09 12:37:44] 2026-01-09 17:36:48,000 | INFO     | 
[2026-01-09 12:37:44] 2026-01-09 17:36:48,000 | INFO     | job summary report
[2026-01-09 12:37:44] 2026-01-09 17:36:48,001 | INFO     | --------------------------------------------------
[2026-01-09 12:37:44] 2026-01-09 17:36:48,001 | INFO     | PanDA job id: 6963149008
[2026-01-09 12:37:44] 2026-01-09 17:36:48,001 | INFO     | task id: 47898826
[2026-01-09 12:37:44] 2026-01-09 17:36:48,001 | INFO     | errors: (none)
[2026-01-09 12:37:44] 2026-01-09 17:36:48,001 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:37:44] 2026-01-09 17:36:48,001 | INFO     | pilot state: finished 
[2026-01-09 12:37:44] 2026-01-09 17:36:48,001 | INFO     | transexitcode: 0
[2026-01-09 12:37:44] 2026-01-09 17:36:48,002 | INFO     | exeerrorcode: 0
[2026-01-09 12:37:44] 2026-01-09 17:36:48,002 | INFO     | exeerrordiag: 
[2026-01-09 12:37:44] 2026-01-09 17:36:48,002 | INFO     | exitcode: 0
[2026-01-09 12:37:44] 2026-01-09 17:36:48,002 | INFO     | exitmsg: OK
[2026-01-09 12:37:44] 2026-01-09 17:36:48,002 | INFO     | cpuconsumptiontime: 74371 s
[2026-01-09 12:37:44] 2026-01-09 17:36:48,002 | INFO     | nevents: 400
[2026-01-09 12:37:44] 2026-01-09 17:36:48,002 | INFO     | neventsw: 0
[2026-01-09 12:37:44] 2026-01-09 17:36:48,002 | INFO     | pid: 764512
[2026-01-09 12:37:44] 2026-01-09 17:36:48,002 | INFO     | pgrp: 764512
[2026-01-09 12:37:44] 2026-01-09 17:36:48,003 | INFO     | corecount: 10
[2026-01-09 12:37:44] 2026-01-09 17:36:48,003 | INFO     | event service: False
[2026-01-09 12:37:44] 2026-01-09 17:36:48,003 | INFO     | sizes: {0: 2283143, 1: 2283999, 12: 2283999, 25: 2284027, 28: 2284317, 36: 2284345, 13325: 2315144, 13330: 2324142, 13333: 2324198, 13352: 2324392}
[2026-01-09 12:37:44] 2026-01-09 17:36:48,003 | INFO     | --------------------------------------------------
[2026-01-09 12:37:44] 2026-01-09 17:36:48,003 | INFO     | 
[2026-01-09 12:37:44] 2026-01-09 17:36:48,003 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 12:37:44] 2026-01-09 17:36:48,070 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,071 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,071 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,071 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,072 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,072 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,072 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,072 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,072 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,072 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,072 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,073 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,073 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,073 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,073 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:37:44] 2026-01-09 17:36:48,073 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,073 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:37:44] 2026-01-09 17:36:48,073 | INFO     | job 6963149008 has completed (purged errors)
[2026-01-09 12:37:44] 2026-01-09 17:36:48,074 | INFO     | overall cleanup function is called
[2026-01-09 12:37:44] 2026-01-09 17:36:49,086 | INFO     | --- collectZombieJob: --- 10, [764512]
[2026-01-09 12:37:44] 2026-01-09 17:36:49,114 | INFO     | zombie collector waiting for pid 764512
[2026-01-09 12:37:44] 2026-01-09 17:36:49,114 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:37:44] 2026-01-09 17:36:49,115 | INFO     | collected zombie processes
[2026-01-09 12:37:44] 2026-01-09 17:36:49,115 | INFO     | will attempt to kill all subprocesses of pid=764512
[2026-01-09 12:37:44] 2026-01-09 17:36:49,767 | INFO     | process IDs to be killed: [764512] (in reverse order)
[2026-01-09 12:37:44] 2026-01-09 17:36:49,952 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:37:44] 2026-01-09 17:36:49,952 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:37:44] 2026-01-09 17:36:49,970 | INFO     | did not find any defunct processes belonging to 764512
[2026-01-09 12:37:44] 2026-01-09 17:36:49,992 | INFO     | did not find any defunct processes belonging to 764512
[2026-01-09 12:37:44] 2026-01-09 17:36:49,992 | INFO     | ready for new job
[2026-01-09 12:37:44] 2026-01-09 17:36:49,992 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:37:44] 2026-01-09 17:36:49,994 | INFO     | ***************************************
[2026-01-09 12:37:44] 2026-01-09 17:36:49,994 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:37:44] 2026-01-09 17:36:49,994 | INFO     | ***************************************
[2026-01-09 12:37:44] 2026-01-09 17:36:49,995 | INFO     | 
[2026-01-09 12:37:44] 2026-01-09 17:36:50,002 | INFO     | architecture information:
[2026-01-09 12:37:44] 2026-01-09 17:36:50,002 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:37:44] 2026-01-09 17:36:50,062 | INFO     | cat /etc/os-release:
[2026-01-09 12:37:44] NAME="CentOS Linux"
[2026-01-09 12:37:44] VERSION="7 (Core)"
[2026-01-09 12:37:44] ID="centos"
[2026-01-09 12:37:44] ID_LIKE="rhel fedora"
[2026-01-09 12:37:44] VERSION_ID="7"
[2026-01-09 12:37:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:37:44] ANSI_COLOR="0;31"
[2026-01-09 12:37:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:37:44] HOME_URL="https://www.centos.org/"
[2026-01-09 12:37:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:37:44] 
[2026-01-09 12:37:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:37:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:37:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:37:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:37:44] 
[2026-01-09 12:37:44] 2026-01-09 17:36:50,063 | INFO     | ***************************************
[2026-01-09 12:37:44] 2026-01-09 17:36:50,566 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 12:37:44] 2026-01-09 17:36:50,689 | INFO     | sufficient remaining disk space (63678971904 B)
[2026-01-09 12:37:44] 2026-01-09 17:36:50,689 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:37:44] 2026-01-09 17:36:50,689 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:37:44] 2026-01-09 17:36:50,689 | INFO     | update_server=False
[2026-01-09 12:37:44] 2026-01-09 17:36:50,690 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:37:44] 2026-01-09 17:36:50,993 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 12:37:44] 2026-01-09 17:36:50,993 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 12:37:44] 2026-01-09 17:36:50,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:37:44] 2026-01-09 17:36:50,994 | INFO     | will abort loop
[2026-01-09 12:37:44] 2026-01-09 17:36:51,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:37:44] 2026-01-09 17:36:51,169 | INFO     | all payload control threads have been joined
[2026-01-09 12:37:44] 2026-01-09 17:36:51,230 | INFO     | all data control threads have been joined
[2026-01-09 12:37:44] 2026-01-09 17:36:51,699 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:37:44] 2026-01-09 17:36:51,706 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:37:44] 2026-01-09 17:36:51,999 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:37:44] 2026-01-09 17:36:52,175 | INFO     | [payload] control thread has finished
[2026-01-09 12:37:44] 2026-01-09 17:36:52,236 | INFO     | [data] control thread has finished
[2026-01-09 12:37:44] 2026-01-09 17:36:52,340 | INFO     | all job control threads have been joined
[2026-01-09 12:37:44] 2026-01-09 17:36:52,363 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:37:44] 2026-01-09 17:36:52,366 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:37:44] 2026-01-09 17:36:52,526 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:37:44] 2026-01-09 17:36:52,606 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:37:44] 2026-01-09 17:36:52,828 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:37:44] 2026-01-09 17:36:52,851 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:37:44] 2026-01-09 17:36:52,903 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:37:44] 2026-01-09 17:36:53,065 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:37:44] 2026-01-09 17:36:53,130 | INFO     | [job] validate thread has finished
[2026-01-09 12:37:44] 2026-01-09 17:36:53,346 | INFO     | [job] control thread has finished
[2026-01-09 12:37:44] 2026-01-09 17:36:53,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:37:44] 2026-01-09 17:36:53,834 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:37:44] 2026-01-09 17:36:57,361 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:37:44] 2026-01-09 17:37:21,285 | INFO     | PID=756876 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 12:37:44] 2026-01-09 17:37:21,285 | INFO     | .. there are 8 such processes running
[2026-01-09 12:37:44] 2026-01-09 17:37:21,286 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:37:44] 2026-01-09 17:37:21,287 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:37:44] 2026-01-09 17:37:21,287 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:37:44] 2026-01-09 17:37:37,845 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:37:44] 2026-01-09 17:37:38,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140099400750912)>', '<ExcThread(monitor, started 140099056551680)>']
[2026-01-09 12:37:44] 2026-01-09 17:37:39,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:37:44] 2026-01-09 17:37:39,397 | INFO     | [monitor] control thread has ended
[2026-01-09 12:37:44] 2026-01-09 17:37:43,532 | INFO     | all workflow threads have been joined
[2026-01-09 12:37:44] 2026-01-09 17:37:43,532 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:37:44] 2026-01-09 17:37:43,533 | INFO     | traces error code: 0
[2026-01-09 12:37:44] 2026-01-09 17:37:43,533 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:37:44] 2026-01-09 17:37:44,660 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:37:44] 2026-01-09 17:37:44,663 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:37:44] 2026-01-09 17:37:44,665 [wrapper] pilotpid: 756876
[2026-01-09 12:37:44] 2026-01-09 17:37:44,667 [wrapper] Pilot exit status: 0
[2026-01-09 12:37:44] 2026-01-09 17:37:44,690 [wrapper] pandaids: 6963149008
[2026-01-09 12:37:44] 2026-01-09 17:37:44,740 [wrapper] cleanup supervisor_pilot 1089179 756877
[2026-01-09 12:37:44] 2026-01-09 17:37:44,743 [wrapper] Test setup, not cleaning
[2026-01-09 12:37:44] 2026-01-09 17:37:44,750 [wrapper] apfmon messages muted
[2026-01-09 12:37:44] 2026-01-09 17:37:44,753 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:37:44] 2026-01-09 17:37:44,755 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:37:44]  *** Error codes and diagnostics ***
[2026-01-09 12:37:44]     "exeErrorCode": 0,
[2026-01-09 12:37:44]     "exeErrorDiag": "",
[2026-01-09 12:37:44]     "pilotErrorCode": 0,
[2026-01-09 12:37:44]     "pilotErrorDiag": "",
[2026-01-09 12:37:44]  *** Listing of results directory ***
[2026-01-09 12:37:44] total 441680
[2026-01-09 12:37:44] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 12:37:44] -rwx------. 1 boincer umatlas     36322 Jan  8 11:05 runpilot2-wrapper.sh
[2026-01-09 12:37:44] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:07 queuedata.json
[2026-01-09 12:37:44] -rw-r--r--. 1 boincer umatlas       100 Jan  9 08:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:37:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 08:52 run_atlas
[2026-01-09 12:37:44] -rw-r--r--. 1 boincer umatlas       105 Jan  9 08:52 job.xml
[2026-01-09 12:37:44] -rw-r--r--. 2 boincer umatlas 224540810 Jan  9 08:52 EVNT.47898824._001119.pool.root.1
[2026-01-09 12:37:44] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 08:52 start_atlas.sh
[2026-01-09 12:37:44] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 08:52 shared
[2026-01-09 12:37:44] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 08:52 input.tar.gz
[2026-01-09 12:37:44] -rw-r--r--. 1 boincer umatlas         0 Jan  9 08:52 boinc_lockfile
[2026-01-09 12:37:44] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 08:52 pandaJob.out
[2026-01-09 12:37:44] -rw-------. 1 boincer umatlas        57 Jan  9 08:52 setup.sh.local
[2026-01-09 12:37:44] -rw-------. 1 boincer umatlas    989377 Jan  9 08:53 agis_schedconf.cvmfs.json
[2026-01-09 12:37:44] drwx------. 5 boincer umatlas      4096 Jan  9 08:53 pilot3
[2026-01-09 12:37:44] -rw-------. 1 boincer umatlas 219254124 Jan  9 12:35 HITS.47898826._028356.pool.root.1
[2026-01-09 12:37:44] -rw-r--r--. 1 boincer umatlas       531 Jan  9 12:35 boinc_task_state.xml
[2026-01-09 12:37:44] -rw-------. 1 boincer umatlas      1038 Jan  9 12:36 memory_monitor_summary.json
[2026-01-09 12:37:44] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:36 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:37:44] -rw-------. 1 boincer umatlas    475345 Jan  9 12:36 log.47898826._028356.job.log.tgz.1
[2026-01-09 12:37:44] -rw-r--r--. 1 boincer umatlas      6614 Jan  9 12:36 init_data.xml
[2026-01-09 12:37:44] -rw-------. 1 boincer umatlas      7819 Jan  9 12:36 heartbeat.json
[2026-01-09 12:37:44] -rw-------. 1 boincer umatlas        95 Jan  9 12:37 pilot_heartbeat.json
[2026-01-09 12:37:44] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:37 boinc_mmap_file
[2026-01-09 12:37:44] -rw-r--r--. 1 boincer umatlas        28 Jan  9 12:37 wrapper_checkpoint.txt
[2026-01-09 12:37:44] -rw-------. 1 boincer umatlas      5008 Jan  9 12:37 pilotlog.txt
[2026-01-09 12:37:44] -rw-------. 1 boincer umatlas   1809006 Jan  9 12:37 log.47898826._028356.job.log.1
[2026-01-09 12:37:44] -rw-------. 1 boincer umatlas       357 Jan  9 12:37 output.list
[2026-01-09 12:37:44] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:37 runtime_log
[2026-01-09 12:37:44] -rw-------. 1 boincer umatlas   2304000 Jan  9 12:37 result.tar.gz
[2026-01-09 12:37:44] -rw-r--r--. 1 boincer umatlas      9340 Jan  9 12:37 runtime_log.err
[2026-01-09 12:37:44] -rw-------. 1 boincer umatlas       656 Jan  9 12:37 e8OODmDh7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6nfKDmEntJGo.diag
[2026-01-09 12:37:44] -rw-r--r--. 1 boincer umatlas     21484 Jan  9 12:37 stderr.txt
[2026-01-09 12:37:44] HITS file was successfully produced:
[2026-01-09 12:37:44] -rw-------. 1 boincer umatlas 219254124 Jan  9 12:35 shared/HITS.pool.root.1
[2026-01-09 12:37:44]  *** Contents of shared directory: ***
[2026-01-09 12:37:44] total 436248
[2026-01-09 12:37:44] -rw-r--r--. 2 boincer umatlas 224540810 Jan  9 08:52 ATLAS.root_0
[2026-01-09 12:37:44] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 08:52 start_atlas.sh
[2026-01-09 12:37:44] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 08:52 input.tar.gz
[2026-01-09 12:37:44] -rw-------. 1 boincer umatlas 219254124 Jan  9 12:35 HITS.pool.root.1
[2026-01-09 12:37:44] -rw-------. 1 boincer umatlas   2304000 Jan  9 12:37 result.tar.gz
12:37:46 (753021): run_atlas exited; CPU time 74749.112267
12:37:46 (753021): called boinc_finish(0)

</stderr_txt>
]]>

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