Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:44 (1253286): wrapper (7.7.26015): starting
00:10:44 (1253286): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:10:44] Arguments: --nthreads 8
[2026-01-09 00:10:44] Threads: 8
[2026-01-09 00:10:44] Checking for CVMFS
[2026-01-09 00:10:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:10:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:10:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:10:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:10:47] 2.13.3.0 6048 92839 309332 154932 1 224 21382727 25181185 34582 16776704 0 578351716 99.624 521841015 27654 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:10:47] CVMFS is ok
[2026-01-09 00:10:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:10:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:10:47] Further information can be found at the LHC@home message board.
[2026-01-09 00:10:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:10:47] Checking for apptainer binary...
[2026-01-09 00:10:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:10:47] Running /usr/bin/apptainer --version
[2026-01-09 00:10:48] apptainer version 1.4.5-2.el9
[2026-01-09 00:10:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:10:49] c-16-35.aglt2.org
[2026-01-09 00:10:49] apptainer works
[2026-01-09 00:10:49] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:10:49] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:10:50] Starting ATLAS job with PandaID=6963152384
[2026-01-09 00:10:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 08:29:49]  *** The last 200 lines of the pilot log: ***
[2026-01-10 08:29:50] 2026-01-10 12:53:55,276 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2799.690875
[2026-01-10 08:29:50] 2026-01-10 12:53:55,319 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6963152384/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 08:29:50] 2026-01-10 12:53:55,320 | INFO     | extracted standard info from prmon json
[2026-01-10 08:29:50] 2026-01-10 12:53:55,320 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 08:29:50] 2026-01-10 12:53:55,320 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 08:29:50] 2026-01-10 12:53:55,321 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 08:29:50] 2026-01-10 12:53:55,322 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 08:29:50] 2026-01-10 12:53:55,370 | INFO     | fitting pss+swap vs Time
[2026-01-10 08:29:50] 2026-01-10 12:53:55,380 | INFO     | sum of square deviations: 2017855148324.366
[2026-01-10 08:29:50] 2026-01-10 12:53:55,528 | INFO     | sum of deviations: 1542604501647.2778
[2026-01-10 08:29:50] 2026-01-10 12:53:55,529 | INFO     | mean x: 1767992625.3058383
[2026-01-10 08:29:50] 2026-01-10 12:53:55,529 | INFO     | mean y: 2492791.836636315
[2026-01-10 08:29:50] 2026-01-10 12:53:55,529 | INFO     | intersect: -1349097477.1381936
[2026-01-10 08:29:50] 2026-01-10 12:53:55,532 | INFO     | chi2: 6.768256735794031
[2026-01-10 08:29:50] 2026-01-10 12:53:55,535 | INFO     | sum of square deviations: 2001687032570.212
[2026-01-10 08:29:50] 2026-01-10 12:53:55,633 | INFO     | sum of deviations: 2016146943140.2358
[2026-01-10 08:29:50] 2026-01-10 12:53:55,633 | INFO     | mean x: 1767992472.81203
[2026-01-10 08:29:50] 2026-01-10 12:53:55,633 | INFO     | mean y: 2497255.7663802365
[2026-01-10 08:29:50] 2026-01-10 12:53:55,634 | INFO     | intersect: -1778266950.4032426
[2026-01-10 08:29:50] 2026-01-10 12:53:55,636 | INFO     | chi2: 3.8894364913150867
[2026-01-10 08:29:50] 2026-01-10 12:53:55,636 | INFO     | current chi2=3.8894364913150867 (change=42.534146632681036 %)
[2026-01-10 08:29:50] 2026-01-10 12:53:55,639 | INFO     | sum of square deviations: 1985605409512.5457
[2026-01-10 08:29:50] 2026-01-10 12:53:55,728 | INFO     | sum of deviations: 2005185316196.189
[2026-01-10 08:29:50] 2026-01-10 12:53:55,729 | INFO     | mean x: 1767992320.3177168
[2026-01-10 08:29:50] 2026-01-10 12:53:55,729 | INFO     | mean y: 2497151.84544965
[2026-01-10 08:29:50] 2026-01-10 12:53:55,729 | INFO     | intersect: -1782929208.7319164
[2026-01-10 08:29:50] 2026-01-10 12:53:55,731 | INFO     | chi2: 3.889392867416095
[2026-01-10 08:29:50] 2026-01-10 12:53:55,731 | INFO     | current chi2=3.889392867416095 (change=0.001121599467923644 %)
[2026-01-10 08:29:50] 2026-01-10 12:53:55,732 | INFO     | right removable region: 1856
[2026-01-10 08:29:50] 2026-01-10 12:53:55,741 | INFO     | sum of square deviations: 2001684406520.2114
[2026-01-10 08:29:50] 2026-01-10 12:53:55,852 | INFO     | sum of deviations: 993478440474.9004
[2026-01-10 08:29:50] 2026-01-10 12:53:55,852 | INFO     | mean x: 1767992777.81203
[2026-01-10 08:29:50] 2026-01-10 12:53:55,852 | INFO     | mean y: 2497968.9597207303
[2026-01-10 08:29:50] 2026-01-10 12:53:55,852 | INFO     | intersect: -874994357.9776063
[2026-01-10 08:29:50] 2026-01-10 12:53:55,855 | INFO     | chi2: 3.6451507071011227
[2026-01-10 08:29:50] 2026-01-10 12:53:55,855 | INFO     | current chi2=3.6451507071011227 (change=46.14343324443226 %)
[2026-01-10 08:29:50] 2026-01-10 12:53:55,857 | INFO     | sum of square deviations: 1985600270990.9106
[2026-01-10 08:29:50] 2026-01-10 12:53:55,945 | INFO     | sum of deviations: 805507415691.2102
[2026-01-10 08:29:50] 2026-01-10 12:53:55,945 | INFO     | mean x: 1767992930.3182552
[2026-01-10 08:29:50] 2026-01-10 12:53:55,945 | INFO     | mean y: 2499751.138395261
[2026-01-10 08:29:50] 2026-01-10 12:53:55,945 | INFO     | intersect: -714729913.3953817
[2026-01-10 08:29:50] 2026-01-10 12:53:55,948 | INFO     | chi2: 3.316702253408283
[2026-01-10 08:29:50] 2026-01-10 12:53:55,948 | INFO     | current chi2=3.316702253408283 (change=9.010558961334267 %)
[2026-01-10 08:29:50] 2026-01-10 12:53:55,948 | INFO     | left removable region: 20
[2026-01-10 08:29:50] 2026-01-10 12:53:55,950 | INFO     | sum of square deviations: 1918993059082.8242
[2026-01-10 08:29:50] 2026-01-10 12:53:56,039 | INFO     | sum of deviations: 1042903555728.4115
[2026-01-10 08:29:50] 2026-01-10 12:53:56,039 | INFO     | mean x: 1767992899.8431373
[2026-01-10 08:29:50] 2026-01-10 12:53:56,039 | INFO     | mean y: 2506333.254901961
[2026-01-10 08:29:50] 2026-01-10 12:53:56,039 | INFO     | intersect: -958334078.867408
[2026-01-10 08:29:50] 2026-01-10 12:53:56,042 | INFO     | chi2: 0.1823468591170811
[2026-01-10 08:29:50] 2026-01-10 12:53:56,042 | INFO     | current memory leak: 0.54 B/s (using 1836 data points, chi2=0.18)
[2026-01-10 08:29:50] 2026-01-10 12:53:56,044 | INFO     | could have reported an average CPU frequency of 2806 MHz (65 samples)
[2026-01-10 08:29:50] 2026-01-10 12:53:56,044 | INFO     | ..............................
[2026-01-10 08:29:50] 2026-01-10 12:53:56,044 | INFO     | . Timing measurements:
[2026-01-10 08:29:50] 2026-01-10 12:53:56,044 | INFO     | . get job = 0 s
[2026-01-10 08:29:50] 2026-01-10 12:53:56,044 | INFO     | . initial setup = 6 s
[2026-01-10 08:29:50] 2026-01-10 12:53:56,044 | INFO     | . payload setup = 47 s
[2026-01-10 08:29:50] 2026-01-10 12:53:56,044 | INFO     | . stage-in = 0 s
[2026-01-10 08:29:50] 2026-01-10 12:53:56,045 | INFO     | . payload execution = 113939 s
[2026-01-10 08:29:50] 2026-01-10 12:53:56,045 | INFO     | . stage-out = 11 s
[2026-01-10 08:29:50] 2026-01-10 12:53:56,045 | INFO     | . log creation = 4 s
[2026-01-10 08:29:50] 2026-01-10 12:53:56,045 | INFO     | ..............................
[2026-01-10 08:29:50] 2026-01-10 12:53:56,228 | INFO     | time since job start (114104s) is within the limit (349056.0s)
[2026-01-10 08:29:50] 2026-01-10 12:53:56,245 | INFO     | 
[2026-01-10 08:29:50] 2026-01-10 12:53:56,245 | INFO     | job summary report
[2026-01-10 08:29:50] 2026-01-10 12:53:56,245 | INFO     | --------------------------------------------------
[2026-01-10 08:29:50] 2026-01-10 12:53:56,246 | INFO     | PanDA job id: 6963152384
[2026-01-10 08:29:50] 2026-01-10 12:53:56,246 | INFO     | task id: 47898826
[2026-01-10 08:29:50] 2026-01-10 12:53:56,246 | INFO     | errors: (none)
[2026-01-10 08:29:50] 2026-01-10 12:53:56,246 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 08:29:50] 2026-01-10 12:53:56,246 | INFO     | pilot state: finished 
[2026-01-10 08:29:50] 2026-01-10 12:53:56,246 | INFO     | transexitcode: 0
[2026-01-10 08:29:50] 2026-01-10 12:53:56,246 | INFO     | exeerrorcode: 0
[2026-01-10 08:29:50] 2026-01-10 12:53:56,246 | INFO     | exeerrordiag: 
[2026-01-10 08:29:50] 2026-01-10 12:53:56,246 | INFO     | exitcode: 0
[2026-01-10 08:29:50] 2026-01-10 12:53:56,247 | INFO     | exitmsg: OK
[2026-01-10 08:29:50] 2026-01-10 12:53:56,247 | INFO     | cpuconsumptiontime: 74758 s
[2026-01-10 08:29:50] 2026-01-10 12:53:56,247 | INFO     | nevents: 400
[2026-01-10 08:29:50] 2026-01-10 12:53:56,247 | INFO     | neventsw: 0
[2026-01-10 08:29:50] 2026-01-10 12:53:56,247 | INFO     | pid: 1291353
[2026-01-10 08:29:50] 2026-01-10 12:53:56,247 | INFO     | pgrp: 1291353
[2026-01-10 08:29:50] 2026-01-10 12:53:56,247 | INFO     | corecount: 8
[2026-01-10 08:29:50] 2026-01-10 12:53:56,247 | INFO     | event service: False
[2026-01-10 08:29:50] 2026-01-10 12:53:56,248 | INFO     | sizes: {0: 2283140, 1: 2283741, 2: 2284024, 3: 2284052, 14: 2284052, 25: 2284080, 34: 2284498, 35: 2284526, 113991: 2359548, 113992: 2359547, 114005: 2368601, 1140
[2026-01-10 08:29:50] 2026-01-10 12:53:56,248 | INFO     | --------------------------------------------------
[2026-01-10 08:29:50] 2026-01-10 12:53:56,248 | INFO     | 
[2026-01-10 08:29:50] 2026-01-10 12:53:56,248 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-10 08:29:50] 2026-01-10 12:53:56,327 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,328 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,328 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,328 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,328 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,328 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,328 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,328 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,329 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,329 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,329 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,329 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,329 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,329 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,329 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,330 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,330 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 08:29:50] 2026-01-10 12:53:56,330 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,330 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 08:29:50] 2026-01-10 12:53:56,330 | INFO     | job 6963152384 has completed (purged errors)
[2026-01-10 08:29:50] 2026-01-10 12:53:56,330 | INFO     | overall cleanup function is called
[2026-01-10 08:29:50] 2026-01-10 12:53:57,341 | INFO     | --- collectZombieJob: --- 10, [1291353]
[2026-01-10 08:29:50] 2026-01-10 12:53:57,341 | INFO     | zombie collector waiting for pid 1291353
[2026-01-10 08:29:50] 2026-01-10 12:53:57,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 08:29:50] 2026-01-10 12:53:57,342 | INFO     | collected zombie processes
[2026-01-10 08:29:50] 2026-01-10 12:53:57,342 | INFO     | will attempt to kill all subprocesses of pid=1291353
[2026-01-10 08:29:50] 2026-01-10 12:53:59,064 | INFO     | process IDs to be killed: [1291353] (in reverse order)
[2026-01-10 08:29:50] 2026-01-10 12:54:01,345 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 08:29:50] 2026-01-10 12:54:01,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 08:29:50] 2026-01-10 12:54:01,602 | INFO     | did not find any defunct processes belonging to 1291353
[2026-01-10 08:29:50] 2026-01-10 12:54:01,681 | INFO     | did not find any defunct processes belonging to 1291353
[2026-01-10 08:29:50] 2026-01-10 12:54:01,682 | INFO     | ready for new job
[2026-01-10 08:29:50] 2026-01-10 12:54:01,723 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 08:29:50] 2026-01-10 12:54:01,770 | INFO     | ***************************************
[2026-01-10 08:29:50] 2026-01-10 12:54:01,770 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 08:29:50] 2026-01-10 12:54:01,770 | INFO     | ***************************************
[2026-01-10 08:29:50] 2026-01-10 12:54:01,771 | INFO     | 
[2026-01-10 08:29:50] 2026-01-10 12:54:01,774 | INFO     | architecture information:
[2026-01-10 08:29:50] 2026-01-10 12:54:01,824 | INFO     | executing command: cat /etc/os-release
[2026-01-10 08:29:50] 2026-01-10 12:54:01,965 | INFO     | cat /etc/os-release:
[2026-01-10 08:29:50] NAME="CentOS Linux"
[2026-01-10 08:29:50] VERSION="7 (Core)"
[2026-01-10 08:29:50] ID="centos"
[2026-01-10 08:29:50] ID_LIKE="rhel fedora"
[2026-01-10 08:29:50] VERSION_ID="7"
[2026-01-10 08:29:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 08:29:50] ANSI_COLOR="0;31"
[2026-01-10 08:29:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 08:29:50] HOME_URL="https://www.centos.org/"
[2026-01-10 08:29:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 08:29:50] 
[2026-01-10 08:29:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 08:29:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 08:29:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 08:29:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 08:29:50] 
[2026-01-10 08:29:50] 2026-01-10 12:54:01,966 | INFO     | ***************************************
[2026-01-10 08:29:50] 2026-01-10 12:54:02,469 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-10 08:29:50] 2026-01-10 12:54:02,540 | INFO     | sufficient remaining disk space (63057166336 B)
[2026-01-10 08:29:50] 2026-01-10 12:54:02,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 08:29:50] 2026-01-10 12:54:02,541 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 08:29:50] 2026-01-10 12:54:02,541 | INFO     | update_server=False
[2026-01-10 08:29:50] 2026-01-10 12:54:02,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 08:29:50] 2026-01-10 12:54:02,541 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 08:29:50] 2026-01-10 12:54:02,804 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 08:29:50] 2026-01-10 12:54:02,804 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 08:29:50] 2026-01-10 12:54:02,804 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 08:29:50] 2026-01-10 12:54:02,805 | INFO     | will abort loop
[2026-01-10 08:29:50] 2026-01-10 12:54:02,830 | INFO     | all data control threads have been joined
[2026-01-10 08:29:50] 2026-01-10 12:54:03,231 | INFO     | all payload control threads have been joined
[2026-01-10 08:29:50] 2026-01-10 12:54:03,547 | INFO     | [job] retrieve thread has finished
[2026-01-10 08:29:50] 2026-01-10 12:54:03,556 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 08:29:50] 2026-01-10 12:54:03,726 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 08:29:50] 2026-01-10 12:54:03,764 | INFO     | all job control threads have been joined
[2026-01-10 08:29:50] 2026-01-10 12:54:03,810 | INFO     | [job] job monitor thread has finished
[2026-01-10 08:29:50] 2026-01-10 12:54:03,827 | INFO     | [payload] failed_post thread has finished
[2026-01-10 08:29:50] 2026-01-10 12:54:03,831 | INFO     | [payload] validate_post thread has finished
[2026-01-10 08:29:50] 2026-01-10 12:54:03,836 | INFO     | [data] control thread has finished
[2026-01-10 08:29:50] 2026-01-10 12:54:03,888 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 08:29:50] 2026-01-10 12:54:03,937 | INFO     | [job] validate thread has finished
[2026-01-10 08:29:50] 2026-01-10 12:54:04,037 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 08:29:50] 2026-01-10 12:54:04,188 | INFO     | [data] copytool_in thread has finished
[2026-01-10 08:29:50] 2026-01-10 12:54:04,237 | INFO     | [payload] control thread has finished
[2026-01-10 08:29:50] 2026-01-10 12:54:04,787 | INFO     | [job] control thread has finished
[2026-01-10 08:29:50] 2026-01-10 12:54:04,799 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 08:29:50] 2026-01-10 12:54:05,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 08:29:50] 2026-01-10 12:54:05,563 | INFO     | [data] copytool_out thread has finished
[2026-01-10 08:29:50] 2026-01-10 12:54:06,313 | INFO     | [job] queue monitor thread has finished
[2026-01-10 08:29:50] 2026-01-10 12:54:06,550 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 08:29:50] 2026-01-10 12:54:30,432 | INFO     | PID=1266566 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 08:29:50] 2026-01-10 12:54:30,432 | INFO     | .. there are 39 such processes running
[2026-01-10 08:29:50] 2026-01-10 12:54:30,433 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 08:29:50] 2026-01-10 12:54:30,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 08:29:50] 2026-01-10 12:54:30,433 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 08:29:50] 2026-01-10 12:54:43,632 | INFO     | [monitor] cgroup control has ended
[2026-01-10 08:29:50] 2026-01-10 12:54:45,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139890556544832)>', '<ExcThread(monitor, started 139890205374208)>']
[2026-01-10 08:29:50] 2026-01-10 12:54:45,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 08:29:50] 2026-01-10 12:54:45,541 | INFO     | [monitor] control thread has ended
[2026-01-10 08:29:50] 2026-01-10 12:54:50,036 | INFO     | all workflow threads have been joined
[2026-01-10 08:29:50] 2026-01-10 12:54:50,036 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 08:29:50] 2026-01-10 12:54:50,037 | INFO     | traces error code: 0
[2026-01-10 08:29:50] 2026-01-10 12:54:50,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 08:29:50] 2026-01-10 12:54:51,128 [wrapper] ==== pilot stdout END ====
[2026-01-10 08:29:50] 2026-01-10 12:54:51,131 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 08:29:50] 2026-01-10 12:54:51,133 [wrapper] pilotpid: 1266566
[2026-01-10 08:29:50] 2026-01-10 12:54:51,135 [wrapper] Pilot exit status: 0
[2026-01-10 08:29:50] 2026-01-10 12:54:51,339 [wrapper] pandaids: 6963152384
[2026-01-10 08:29:50] 2026-01-10 12:54:51,538 [wrapper] cleanup supervisor_pilot  130409 1266567
[2026-01-10 08:29:50] 2026-01-10 12:54:51,549 [wrapper] Test setup, not cleaning
[2026-01-10 08:29:50] 2026-01-10 12:54:51,638 [wrapper] apfmon messages muted
[2026-01-10 08:29:50] 2026-01-10 12:54:51,664 [wrapper] ==== wrapper stdout END ====
[2026-01-10 08:29:50] 2026-01-10 12:54:51,708 [wrapper] ==== wrapper stderr END ====
[2026-01-10 08:29:50]  *** Error codes and diagnostics ***
[2026-01-10 08:29:50]     "exeErrorCode": 0,
[2026-01-10 08:29:50]     "exeErrorDiag": "",
[2026-01-10 08:29:50]     "pilotErrorCode": 0,
[2026-01-10 08:29:50]     "pilotErrorDiag": "",
[2026-01-10 08:29:50]  *** Listing of results directory ***
[2026-01-10 08:29:50] total 466100
[2026-01-10 08:29:50] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-10 08:29:50] -rwx------. 1 boincer umatlas     36322 Jan  8 11:06 runpilot2-wrapper.sh
[2026-01-10 08:29:50] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-10 08:29:50] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 08:29:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:10 run_atlas
[2026-01-10 08:29:50] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:10 job.xml
[2026-01-10 08:29:50] -rw-r--r--. 2 boincer umatlas 224187894 Jan  9 00:10 EVNT.47898824._000868.pool.root.1
[2026-01-10 08:29:50] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:10 start_atlas.sh
[2026-01-10 08:29:50] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:10 shared
[2026-01-10 08:29:50] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 00:10 input.tar.gz
[2026-01-10 08:29:50] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:10 boinc_lockfile
[2026-01-10 08:29:50] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 00:10 pandaJob.out
[2026-01-10 08:29:50] -rw-------. 1 boincer umatlas        57 Jan  9 00:10 setup.sh.local
[2026-01-10 08:29:50] -rw-------. 1 boincer umatlas    989771 Jan  9 00:12 agis_schedconf.cvmfs.json
[2026-01-10 08:29:50] drwx------. 5 boincer umatlas      4096 Jan  9 00:12 pilot3
[2026-01-10 08:29:50] -rw-------. 1 boincer umatlas 219540524 Jan 10 07:47 HITS.47898826._029185.pool.root.1
[2026-01-10 08:29:50] -rw-r--r--. 1 boincer umatlas       530 Jan 10 07:48 boinc_task_state.xml
[2026-01-10 08:29:50] -rw-------. 1 boincer umatlas      1065 Jan 10 07:53 memory_monitor_summary.json
[2026-01-10 08:29:50] -rw-------. 1 boincer umatlas   1516240 Jan 10 07:53 agis_ddmendpoints.agis.ALL.json
[2026-01-10 08:29:50] -rw-------. 1 boincer umatlas   1679387 Jan 10 07:53 log.47898826._029185.job.log.tgz.1
[2026-01-10 08:29:50] -rw-------. 1 boincer umatlas      7870 Jan 10 07:53 heartbeat.json
[2026-01-10 08:29:50] -rw-------. 1 boincer umatlas        95 Jan 10 07:54 pilot_heartbeat.json
[2026-01-10 08:29:50] -rw-------. 1 boincer umatlas      5010 Jan 10 07:54 pilotlog.txt
[2026-01-10 08:29:50] -rw-------. 1 boincer umatlas  13141088 Jan 10 07:54 log.47898826._029185.job.log.1
[2026-01-10 08:29:50] -rw-------. 1 boincer umatlas       357 Jan 10 07:54 output.list
[2026-01-10 08:29:50] -rw-r--r--. 1 boincer umatlas       620 Jan 10 07:54 runtime_log
[2026-01-10 08:29:50] -rw-------. 1 boincer umatlas  14837760 Jan 10 07:54 result.tar.gz
[2026-01-10 08:29:50] -rw-------. 1 boincer umatlas       665 Jan 10 07:54 x1JMDmCi7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm23kKDmaeFtSo.diag
[2026-01-10 08:29:50] -rw-r--r--. 1 boincer umatlas      9339 Jan 10 07:54 runtime_log.err
[2026-01-10 08:29:50] -rw-r--r--. 1 boincer umatlas      6611 Jan 10 08:29 init_data.xml
[2026-01-10 08:29:50] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 08:29 boinc_mmap_file
[2026-01-10 08:29:50] -rw-r--r--. 1 boincer umatlas        27 Jan 10 08:29 wrapper_checkpoint.txt
[2026-01-10 08:29:50] -rw-r--r--. 1 boincer umatlas     21236 Jan 10 08:29 stderr.txt
[2026-01-10 08:29:50] HITS file was successfully produced:
[2026-01-10 08:29:50] -rw-------. 1 boincer umatlas 219540524 Jan 10 07:47 shared/HITS.pool.root.1
[2026-01-10 08:29:50]  *** Contents of shared directory: ***
[2026-01-10 08:29:50] total 448424
[2026-01-10 08:29:50] -rw-r--r--. 2 boincer umatlas 224187894 Jan  9 00:10 ATLAS.root_0
[2026-01-10 08:29:50] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:10 start_atlas.sh
[2026-01-10 08:29:50] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 00:10 input.tar.gz
[2026-01-10 08:29:50] -rw-------. 1 boincer umatlas 219540524 Jan 10 07:47 HITS.pool.root.1
[2026-01-10 08:29:50] -rw-------. 1 boincer umatlas  14837760 Jan 10 07:54 result.tar.gz
08:29:52 (1253286): run_atlas exited; CPU time 81808.986509
08:29:52 (1253286): called boinc_finish(0)

</stderr_txt>
]]>

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