Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:20:11 (3572751): wrapper (7.7.26015): starting
15:20:11 (3572751): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 15:20:11] Arguments: --nthreads 8
[2026-01-09 15:20:11] Threads: 8
[2026-01-09 15:20:11] Checking for CVMFS
[2026-01-09 15:20:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:20:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:20:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:20:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:20:12] 2.13.3.0 589311 17372 150460 154956 2 17 37784450 39288832 6840 16776704 0 7218380 99.572 10376093 50105 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 15:20:12] CVMFS is ok
[2026-01-09 15:20:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 15:20:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 15:20:13] Further information can be found at the LHC@home message board.
[2026-01-09 15:20:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:20:13] Checking for apptainer binary...
[2026-01-09 15:20:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:20:13] Running /usr/bin/apptainer --version
[2026-01-09 15:20:13] apptainer version 1.4.5-2.el9
[2026-01-09 15:20:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:20:14] c-210-23.aglt2.org
[2026-01-09 15:20:14] apptainer works
[2026-01-09 15:20:14] Set ATHENA_PROC_NUMBER=8
[2026-01-09 15:20:14] Set ATHENA_CORE_NUMBER=8
[2026-01-09 15:20:14] Starting ATLAS job with PandaID=6963152670
[2026-01-09 15:20:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:50:23]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:50:23] 2026-01-10 00:49:43,090 | INFO     | monitor loop #1085: job 0:6963152670 is in state 'finished'
[2026-01-09 19:50:23] 2026-01-10 00:49:43,090 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:23] 2026-01-10 00:49:45,052 | INFO     | time since job start (16136s) is within the limit (349056.0s)
[2026-01-09 19:50:23] 2026-01-10 00:49:45,599 | INFO     | monitor loop #1086: job 0:6963152670 is in state 'finished'
[2026-01-09 19:50:23] 2026-01-10 00:49:45,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:23] 2026-01-10 00:49:47,059 | INFO     | time since job start (16138s) is within the limit (349056.0s)
[2026-01-09 19:50:23] 2026-01-10 00:49:48,105 | INFO     | monitor loop #1087: job 0:6963152670 is in state 'finished'
[2026-01-09 19:50:23] 2026-01-10 00:49:48,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:23] 2026-01-10 00:49:49,069 | INFO     | time since job start (16140s) is within the limit (349056.0s)
[2026-01-09 19:50:23] 2026-01-10 00:49:50,196 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 19:50:23] 2026-01-10 00:49:50,232 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.104225
[2026-01-09 19:50:23] 2026-01-10 00:49:50,239 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963152670/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:50:23] 2026-01-10 00:49:50,240 | INFO     | extracted standard info from prmon json
[2026-01-09 19:50:23] 2026-01-10 00:49:50,240 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:50:23] 2026-01-10 00:49:50,240 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:50:23] 2026-01-10 00:49:50,241 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:50:23] 2026-01-10 00:49:50,241 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:50:23] 2026-01-10 00:49:50,246 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:50:23] 2026-01-10 00:49:50,247 | INFO     | sum of square deviations: 5640794718.958155
[2026-01-09 19:50:23] 2026-01-10 00:49:50,249 | INFO     | sum of deviations: -31763704613.44488
[2026-01-09 19:50:23] 2026-01-10 00:49:50,249 | INFO     | mean x: 1767998111.365019
[2026-01-09 19:50:23] 2026-01-10 00:49:50,249 | INFO     | mean y: 2561634.9733840306
[2026-01-09 19:50:23] 2026-01-10 00:49:50,249 | INFO     | intersect: 9958281097.301064
[2026-01-09 19:50:23] 2026-01-10 00:49:50,250 | INFO     | chi2: 2.74704281996724
[2026-01-09 19:50:23] 2026-01-10 00:49:50,250 | INFO     | sum of square deviations: 5325180870.779082
[2026-01-09 19:50:23] 2026-01-10 00:49:50,252 | INFO     | sum of deviations: -30816350693.255833
[2026-01-09 19:50:23] 2026-01-10 00:49:50,253 | INFO     | mean x: 1767997958.872093
[2026-01-09 19:50:23] 2026-01-10 00:49:50,253 | INFO     | mean y: 2562093.6589147286
[2026-01-09 19:50:23] 2026-01-10 00:49:50,253 | INFO     | intersect: 10233809904.32566
[2026-01-09 19:50:23] 2026-01-10 00:49:50,253 | INFO     | chi2: 2.745085873991339
[2026-01-09 19:50:23] 2026-01-10 00:49:50,253 | INFO     | current chi2=2.745085873991339 (change=0.07123827709115768 %)
[2026-01-09 19:50:23] 2026-01-10 00:49:50,253 | INFO     | right removable region: 257
[2026-01-09 19:50:23] 2026-01-10 00:49:50,254 | INFO     | sum of square deviations: 5325138231.519392
[2026-01-09 19:50:23] 2026-01-10 00:49:50,256 | INFO     | sum of deviations: -90235850308.41086
[2026-01-09 19:50:23] 2026-01-10 00:49:50,256 | INFO     | mean x: 1767998263.868217
[2026-01-09 19:50:23] 2026-01-10 00:49:50,256 | INFO     | mean y: 2589726.69379845
[2026-01-09 19:50:23] 2026-01-10 00:49:50,256 | INFO     | intersect: 29961779469.346348
[2026-01-09 19:50:23] 2026-01-10 00:49:50,257 | INFO     | chi2: 0.47511914113564735
[2026-01-09 19:50:23] 2026-01-10 00:49:50,257 | INFO     | current chi2=0.47511914113564735 (change=82.70434164032021 %)
[2026-01-09 19:50:23] 2026-01-10 00:49:50,257 | INFO     | sum of square deviations: 5021482091.075077
[2026-01-09 19:50:23] 2026-01-10 00:49:50,259 | INFO     | sum of deviations: -93871151473.747
[2026-01-09 19:50:23] 2026-01-10 00:49:50,260 | INFO     | mean x: 1767998416.3715415
[2026-01-09 19:50:23] 2026-01-10 00:49:50,260 | INFO     | mean y: 2591533.146245059
[2026-01-09 19:50:23] 2026-01-10 00:49:50,260 | INFO     | intersect: 33053400863.629307
[2026-01-09 19:50:23] 2026-01-10 00:49:50,260 | INFO     | chi2: 0.4302713884903411
[2026-01-09 19:50:23] 2026-01-10 00:49:50,260 | INFO     | current chi2=0.4302713884903411 (change=9.439264547016462 %)
[2026-01-09 19:50:23] 2026-01-10 00:49:50,261 | INFO     | left removable region: 20
[2026-01-09 19:50:23] 2026-01-10 00:49:50,261 | INFO     | sum of square deviations: 4127764622.2869205
[2026-01-09 19:50:23] 2026-01-10 00:49:50,263 | INFO     | sum of deviations: -73514971052.56113
[2026-01-09 19:50:23] 2026-01-10 00:49:50,263 | INFO     | mean x: 1767998538.3881857
[2026-01-09 19:50:23] 2026-01-10 00:49:50,263 | INFO     | mean y: 2582793.299578059
[2026-01-09 19:50:23] 2026-01-10 00:49:50,263 | INFO     | intersect: 31490415376.778545
[2026-01-09 19:50:23] 2026-01-10 00:49:50,263 | INFO     | chi2: 0.3984201047334249
[2026-01-09 19:50:23] 2026-01-10 00:49:50,264 | INFO     | current memory leak: -17.81 B/s (using 237 data points, chi2=0.40)
[2026-01-09 19:50:23] 2026-01-10 00:49:50,264 | INFO     | could have reported an average CPU frequency of 2600 MHz (12 samples)
[2026-01-09 19:50:23] 2026-01-10 00:49:50,265 | INFO     | ..............................
[2026-01-09 19:50:23] 2026-01-10 00:49:50,265 | INFO     | . Timing measurements:
[2026-01-09 19:50:23] 2026-01-10 00:49:50,265 | INFO     | . get job = 0 s
[2026-01-09 19:50:23] 2026-01-10 00:49:50,265 | INFO     | . initial setup = 4 s
[2026-01-09 19:50:23] 2026-01-10 00:49:50,265 | INFO     | . payload setup = 23 s
[2026-01-09 19:50:23] 2026-01-10 00:49:50,265 | INFO     | . stage-in = 0 s
[2026-01-09 19:50:23] 2026-01-10 00:49:50,265 | INFO     | . payload execution = 16054 s
[2026-01-09 19:50:23] 2026-01-10 00:49:50,265 | INFO     | . stage-out = 3 s
[2026-01-09 19:50:23] 2026-01-10 00:49:50,265 | INFO     | . log creation = 0 s
[2026-01-09 19:50:23] 2026-01-10 00:49:50,266 | INFO     | ..............................
[2026-01-09 19:50:23] 2026-01-10 00:49:50,370 | INFO     | 
[2026-01-09 19:50:23] 2026-01-10 00:49:50,371 | INFO     | job summary report
[2026-01-09 19:50:23] 2026-01-10 00:49:50,371 | INFO     | --------------------------------------------------
[2026-01-09 19:50:23] 2026-01-10 00:49:50,371 | INFO     | PanDA job id: 6963152670
[2026-01-09 19:50:23] 2026-01-10 00:49:50,371 | INFO     | task id: 47898826
[2026-01-09 19:50:23] 2026-01-10 00:49:50,371 | INFO     | errors: (none)
[2026-01-09 19:50:23] 2026-01-10 00:49:50,371 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:50:23] 2026-01-10 00:49:50,371 | INFO     | pilot state: finished 
[2026-01-09 19:50:23] 2026-01-10 00:49:50,371 | INFO     | transexitcode: 0
[2026-01-09 19:50:23] 2026-01-10 00:49:50,372 | INFO     | exeerrorcode: 0
[2026-01-09 19:50:23] 2026-01-10 00:49:50,372 | INFO     | exeerrordiag: 
[2026-01-09 19:50:23] 2026-01-10 00:49:50,372 | INFO     | exitcode: 0
[2026-01-09 19:50:23] 2026-01-10 00:49:50,372 | INFO     | exitmsg: OK
[2026-01-09 19:50:23] 2026-01-10 00:49:50,372 | INFO     | cpuconsumptiontime: 69495 s
[2026-01-09 19:50:23] 2026-01-10 00:49:50,372 | INFO     | nevents: 400
[2026-01-09 19:50:23] 2026-01-10 00:49:50,372 | INFO     | neventsw: 0
[2026-01-09 19:50:23] 2026-01-10 00:49:50,372 | INFO     | pid: 3583255
[2026-01-09 19:50:23] 2026-01-10 00:49:50,372 | INFO     | pgrp: 3583255
[2026-01-09 19:50:23] 2026-01-10 00:49:50,372 | INFO     | corecount: 8
[2026-01-09 19:50:23] 2026-01-10 00:49:50,373 | INFO     | event service: False
[2026-01-09 19:50:23] 2026-01-10 00:49:50,373 | INFO     | sizes: {0: 2283797, 1: 2283996, 2: 2283996, 6: 2284286, 13: 2284314, 16082: 2315836, 16085: 2324834, 16089: 2324890, 16110: 2325084}
[2026-01-09 19:50:23] 2026-01-10 00:49:50,373 | INFO     | --------------------------------------------------
[2026-01-09 19:50:23] 2026-01-10 00:49:50,373 | INFO     | 
[2026-01-09 19:50:23] 2026-01-10 00:49:50,373 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 19:50:23] 2026-01-10 00:49:50,394 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,395 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,395 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,395 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,395 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,396 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,396 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,396 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,396 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,396 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,397 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,397 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:50:23] 2026-01-10 00:49:50,397 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,397 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:50:23] 2026-01-10 00:49:50,397 | INFO     | job 6963152670 has completed (purged errors)
[2026-01-09 19:50:23] 2026-01-10 00:49:50,397 | INFO     | overall cleanup function is called
[2026-01-09 19:50:23] 2026-01-10 00:49:51,453 | INFO     | --- collectZombieJob: --- 10, [3583255]
[2026-01-09 19:50:23] 2026-01-10 00:49:51,453 | INFO     | zombie collector waiting for pid 3583255
[2026-01-09 19:50:23] 2026-01-10 00:49:51,453 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:50:23] 2026-01-10 00:49:51,454 | INFO     | collected zombie processes
[2026-01-09 19:50:23] 2026-01-10 00:49:51,454 | INFO     | will attempt to kill all subprocesses of pid=3583255
[2026-01-09 19:50:23] 2026-01-10 00:49:51,759 | INFO     | process IDs to be killed: [3583255] (in reverse order)
[2026-01-09 19:50:23] 2026-01-10 00:49:51,831 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:50:23] 2026-01-10 00:49:51,832 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:50:23] 2026-01-10 00:49:51,839 | INFO     | did not find any defunct processes belonging to 3583255
[2026-01-09 19:50:23] 2026-01-10 00:49:51,847 | INFO     | did not find any defunct processes belonging to 3583255
[2026-01-09 19:50:23] 2026-01-10 00:49:51,847 | INFO     | ready for new job
[2026-01-09 19:50:23] 2026-01-10 00:49:51,847 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:50:23] 2026-01-10 00:49:51,850 | INFO     | ***************************************
[2026-01-09 19:50:23] 2026-01-10 00:49:51,850 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:50:23] 2026-01-10 00:49:51,850 | INFO     | ***************************************
[2026-01-09 19:50:23] 2026-01-10 00:49:51,850 | INFO     | 
[2026-01-09 19:50:23] 2026-01-10 00:49:51,852 | INFO     | architecture information:
[2026-01-09 19:50:23] 2026-01-10 00:49:51,852 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:50:23] 2026-01-10 00:49:51,868 | INFO     | cat /etc/os-release:
[2026-01-09 19:50:23] NAME="CentOS Linux"
[2026-01-09 19:50:23] VERSION="7 (Core)"
[2026-01-09 19:50:23] ID="centos"
[2026-01-09 19:50:23] ID_LIKE="rhel fedora"
[2026-01-09 19:50:23] VERSION_ID="7"
[2026-01-09 19:50:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:50:23] ANSI_COLOR="0;31"
[2026-01-09 19:50:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:50:23] HOME_URL="https://www.centos.org/"
[2026-01-09 19:50:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:50:23] 
[2026-01-09 19:50:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:50:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:50:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:50:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:50:23] 
[2026-01-09 19:50:23] 2026-01-10 00:49:51,869 | INFO     | ***************************************
[2026-01-09 19:50:23] 2026-01-10 00:49:52,397 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 19:50:23] 2026-01-10 00:49:52,448 | INFO     | sufficient remaining disk space (52868153344 B)
[2026-01-09 19:50:23] 2026-01-10 00:49:52,449 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:50:23] 2026-01-10 00:49:52,449 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:50:23] 2026-01-10 00:49:52,449 | INFO     | update_server=False
[2026-01-09 19:50:23] 2026-01-10 00:49:52,449 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:50:23] 2026-01-10 00:49:52,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:50:23] 2026-01-10 00:49:52,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:50:23] 2026-01-10 00:49:52,450 | INFO     | aborting loop
[2026-01-09 19:50:23] 2026-01-10 00:49:52,900 | INFO     | all data control threads have been joined
[2026-01-09 19:50:23] 2026-01-10 00:49:53,455 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:50:23] 2026-01-10 00:49:53,470 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:50:23] 2026-01-10 00:49:53,508 | INFO     | all payload control threads have been joined
[2026-01-09 19:50:23] 2026-01-10 00:49:53,751 | INFO     | all job control threads have been joined
[2026-01-09 19:50:23] 2026-01-10 00:49:53,828 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:50:23] 2026-01-10 00:49:53,901 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:50:23] 2026-01-10 00:49:53,907 | INFO     | [data] control thread has finished
[2026-01-09 19:50:23] 2026-01-10 00:49:53,936 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:50:23] 2026-01-10 00:49:53,958 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:50:23] 2026-01-10 00:49:54,236 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:50:23] 2026-01-10 00:49:54,414 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:50:23] 2026-01-10 00:49:54,448 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:50:23] 2026-01-10 00:49:54,456 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:50:23] 2026-01-10 00:49:54,514 | INFO     | [payload] control thread has finished
[2026-01-09 19:50:23] 2026-01-10 00:49:54,757 | INFO     | [job] control thread has finished
[2026-01-09 19:50:23] 2026-01-10 00:49:54,820 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:50:23] 2026-01-10 00:49:54,852 | INFO     | [job] validate thread has finished
[2026-01-09 19:50:23] 2026-01-10 00:49:55,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:50:23] 2026-01-10 00:49:56,412 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:50:23] 2026-01-10 00:49:57,926 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:50:23] 2026-01-10 00:50:17,259 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:50:23] 2026-01-10 00:50:17,622 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140185155413824)>', '<ExcThread(monitor, started 140184712640256)>']
[2026-01-09 19:50:23] 2026-01-10 00:50:22,649 | INFO     | all workflow threads have been joined
[2026-01-09 19:50:23] 2026-01-10 00:50:22,649 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:50:23] 2026-01-10 00:50:22,649 | INFO     | traces error code: 0
[2026-01-09 19:50:23] 2026-01-10 00:50:22,650 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:50:23] 2026-01-10 00:50:22,822 | INFO     | PID=3576495 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 19:50:23] 2026-01-10 00:50:22,822 | INFO     | .. there are 7 such processes running
[2026-01-09 19:50:23] 2026-01-10 00:50:22,823 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:50:23] 2026-01-10 00:50:22,823 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:50:23] 2026-01-10 00:50:22,823 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:50:23] 2026-01-10 00:50:22,823 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:50:23] 2026-01-10 00:50:22,823 | INFO     | [monitor] control thread has ended
[2026-01-09 19:50:23] 2026-01-10 00:50:22,984 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:50:23] 2026-01-10 00:50:22,986 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:50:23] 2026-01-10 00:50:22,989 [wrapper] pilotpid: 3576495
[2026-01-09 19:50:23] 2026-01-10 00:50:22,991 [wrapper] Pilot exit status: 0
[2026-01-09 19:50:23] 2026-01-10 00:50:23,003 [wrapper] pandaids: 6963152670
[2026-01-09 19:50:23] 2026-01-10 00:50:23,049 [wrapper] cleanup supervisor_pilot 3962716 3576496
[2026-01-09 19:50:23] 2026-01-10 00:50:23,052 [wrapper] Test setup, not cleaning
[2026-01-09 19:50:23] 2026-01-10 00:50:23,054 [wrapper] apfmon messages muted
[2026-01-09 19:50:23] 2026-01-10 00:50:23,056 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:50:23] 2026-01-10 00:50:23,059 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:50:23]  *** Error codes and diagnostics ***
[2026-01-09 19:50:23]     "exeErrorCode": 0,
[2026-01-09 19:50:23]     "exeErrorDiag": "",
[2026-01-09 19:50:23]     "pilotErrorCode": 0,
[2026-01-09 19:50:23]     "pilotErrorDiag": "",
[2026-01-09 19:50:23]  *** Listing of results directory ***
[2026-01-09 19:50:23] total 443728
[2026-01-09 19:50:23] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 19:50:23] -rwx------. 1 boincer umatlas     36322 Jan  8 11:06 runpilot2-wrapper.sh
[2026-01-09 19:50:23] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 19:50:23] -rw-r--r--. 1 boincer umatlas       100 Jan  9 15:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:50:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 15:20 run_atlas
[2026-01-09 19:50:23] -rw-r--r--. 1 boincer umatlas       105 Jan  9 15:20 job.xml
[2026-01-09 19:50:23] -rw-r--r--. 2 boincer umatlas 224282545 Jan  9 15:20 EVNT.47898824._000878.pool.root.1
[2026-01-09 19:50:23] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 15:20 start_atlas.sh
[2026-01-09 19:50:23] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 15:20 shared
[2026-01-09 19:50:23] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 15:20 input.tar.gz
[2026-01-09 19:50:23] -rw-r--r--. 1 boincer umatlas         0 Jan  9 15:20 boinc_lockfile
[2026-01-09 19:50:23] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 15:20 pandaJob.out
[2026-01-09 19:50:23] -rw-------. 1 boincer umatlas        57 Jan  9 15:20 setup.sh.local
[2026-01-09 19:50:23] -rw-------. 1 boincer umatlas    989381 Jan  9 15:20 agis_schedconf.cvmfs.json
[2026-01-09 19:50:23] drwx------. 5 boincer umatlas      4096 Jan  9 15:20 pilot3
[2026-01-09 19:50:23] -rw-r--r--. 1 boincer umatlas      6657 Jan  9 19:48 init_data.xml
[2026-01-09 19:50:23] -rw-------. 1 boincer umatlas 220917560 Jan  9 19:48 HITS.47898826._029428.pool.root.1
[2026-01-09 19:50:23] -rw-r--r--. 1 boincer umatlas       530 Jan  9 19:48 boinc_task_state.xml
[2026-01-09 19:50:23] -rw-------. 1 boincer umatlas      1037 Jan  9 19:49 memory_monitor_summary.json
[2026-01-09 19:50:23] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:49 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:50:23] -rw-------. 1 boincer umatlas    477226 Jan  9 19:49 log.47898826._029428.job.log.tgz.1
[2026-01-09 19:50:23] -rw-------. 1 boincer umatlas        95 Jan  9 19:49 pilot_heartbeat.json
[2026-01-09 19:50:23] -rw-------. 1 boincer umatlas      7819 Jan  9 19:49 heartbeat.json
[2026-01-09 19:50:23] -rw-r--r--. 1 boincer umatlas        28 Jan  9 19:50 wrapper_checkpoint.txt
[2026-01-09 19:50:23] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 19:50 boinc_mmap_file
[2026-01-09 19:50:23] -rw-------. 1 boincer umatlas       822 Jan  9 19:50 pilotlog.txt
[2026-01-09 19:50:23] -rw-------. 1 boincer umatlas   2155274 Jan  9 19:50 log.47898826._029428.job.log.1
[2026-01-09 19:50:23] -rw-------. 1 boincer umatlas       357 Jan  9 19:50 output.list
[2026-01-09 19:50:23] -rw-r--r--. 1 boincer umatlas       620 Jan  9 19:50 runtime_log
[2026-01-09 19:50:23] -rw-------. 1 boincer umatlas   2652160 Jan  9 19:50 result.tar.gz
[2026-01-09 19:50:23] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 19:50 runtime_log.err
[2026-01-09 19:50:23] -rw-------. 1 boincer umatlas       656 Jan  9 19:50 5pWKDmNi7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFsfKDmSvobYn.diag
[2026-01-09 19:50:23] -rw-r--r--. 1 boincer umatlas     21413 Jan  9 19:50 stderr.txt
[2026-01-09 19:50:23] HITS file was successfully produced:
[2026-01-09 19:50:23] -rw-------. 1 boincer umatlas 220917560 Jan  9 19:48 shared/HITS.pool.root.1
[2026-01-09 19:50:23]  *** Contents of shared directory: ***
[2026-01-09 19:50:23] total 437960
[2026-01-09 19:50:23] -rw-r--r--. 2 boincer umatlas 224282545 Jan  9 15:20 ATLAS.root_0
[2026-01-09 19:50:23] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 15:20 start_atlas.sh
[2026-01-09 19:50:23] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 15:20 input.tar.gz
[2026-01-09 19:50:23] -rw-------. 1 boincer umatlas 220917560 Jan  9 19:48 HITS.pool.root.1
[2026-01-09 19:50:23] -rw-------. 1 boincer umatlas   2652160 Jan  9 19:50 result.tar.gz
19:50:24 (3572751): run_atlas exited; CPU time 69813.677270
19:50:24 (3572751): called boinc_finish(0)

</stderr_txt>
]]>

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