Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:42 (176928): wrapper (7.7.26015): starting
00:11:42 (176928): wrapper: running run_atlas (--nthreads 10)
[2026-01-09 00:11:42] Arguments: --nthreads 10
[2026-01-09 00:11:42] Threads: 10
[2026-01-09 00:11:42] Checking for CVMFS
[2026-01-09 00:11:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:11:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:11:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:11:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:11:44] 2.13.3.0 10954 92971 399676 154932 2 172 22569237 32935936 11351 16776704 26 360597442 99.472 528962146 38303 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:11:44] CVMFS is ok
[2026-01-09 00:11:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:11:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:11:44] Further information can be found at the LHC@home message board.
[2026-01-09 00:11:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:11:44] Checking for apptainer binary...
[2026-01-09 00:11:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:11:44] Running /usr/bin/apptainer --version
[2026-01-09 00:11:45] apptainer version 1.4.5-2.el9
[2026-01-09 00:11:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:11:46] c7-11-13.aglt2.org
[2026-01-09 00:11:46] apptainer works
[2026-01-09 00:11:46] Set ATHENA_PROC_NUMBER=10
[2026-01-09 00:11:46] Set ATHENA_CORE_NUMBER=10
[2026-01-09 00:11:46] Starting ATLAS job with PandaID=6963152898
[2026-01-09 00:11:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:36:48]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:36:48] 2026-01-09 09:46:39,910 | INFO     | monitor loop #971: job 0:6963152898 is in state 'finished'
[2026-01-09 08:36:48] 2026-01-09 09:46:39,910 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 08:36:48] 2026-01-09 09:46:40,006 | INFO     | time since job start (16393s) is within the limit (349056.0s)
[2026-01-09 08:36:48] 2026-01-09 09:46:40,006 | INFO     | 16404s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 08:36:48] 2026-01-09 09:46:42,013 | INFO     | time since job start (16395s) is within the limit (349056.0s)
[2026-01-09 08:36:48] 2026-01-09 09:46:42,418 | INFO     | monitor loop #972: job 0:6963152898 is in state 'finished'
[2026-01-09 08:36:48] 2026-01-09 09:46:42,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 08:36:48] 2026-01-09 09:46:44,020 | INFO     | time since job start (16397s) is within the limit (349056.0s)
[2026-01-09 08:36:48] 2026-01-09 09:46:44,570 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 08:36:48] 2026-01-09 09:46:44,588 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3291.6695468750004
[2026-01-09 08:36:48] 2026-01-09 09:46:44,601 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963152898/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:36:48] 2026-01-09 09:46:44,601 | INFO     | extracted standard info from prmon json
[2026-01-09 08:36:48] 2026-01-09 09:46:44,601 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:36:48] 2026-01-09 09:46:44,601 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:36:48] 2026-01-09 09:46:44,602 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:36:48] 2026-01-09 09:46:44,602 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:36:48] 2026-01-09 09:46:44,606 | INFO     | fitting pss+swap vs Time
[2026-01-09 08:36:48] 2026-01-09 09:46:44,606 | INFO     | sum of square deviations: 5770357058.150922
[2026-01-09 08:36:48] 2026-01-09 09:46:44,608 | INFO     | sum of deviations: -5814324821.905644
[2026-01-09 08:36:48] 2026-01-09 09:46:44,608 | INFO     | mean x: 1767943850.0566037
[2026-01-09 08:36:48] 2026-01-09 09:46:44,608 | INFO     | mean y: 2624777.2603773586
[2026-01-09 08:36:48] 2026-01-09 09:46:44,608 | INFO     | intersect: 1784039637.299128
[2026-01-09 08:36:48] 2026-01-09 09:46:44,609 | INFO     | chi2: 2.8183722864514165
[2026-01-09 08:36:48] 2026-01-09 09:46:44,609 | INFO     | sum of square deviations: 5449886111.8884535
[2026-01-09 08:36:48] 2026-01-09 09:46:44,610 | INFO     | sum of deviations: -5559145324.334592
[2026-01-09 08:36:48] 2026-01-09 09:46:44,611 | INFO     | mean x: 1767943697.5653846
[2026-01-09 08:36:48] 2026-01-09 09:46:44,611 | INFO     | mean y: 2624898.696153846
[2026-01-09 08:36:48] 2026-01-09 09:46:44,611 | INFO     | intersect: 1806012297.6672866
[2026-01-09 08:36:48] 2026-01-09 09:46:44,611 | INFO     | chi2: 2.8182421587737227
[2026-01-09 08:36:48] 2026-01-09 09:46:44,611 | INFO     | current chi2=2.8182421587737227 (change=0.0046171216740694245 %)
[2026-01-09 08:36:48] 2026-01-09 09:46:44,611 | INFO     | right removable region: 259
[2026-01-09 08:36:48] 2026-01-09 09:46:44,611 | INFO     | sum of square deviations: 5449795405.753848
[2026-01-09 08:36:48] 2026-01-09 09:46:44,613 | INFO     | sum of deviations: -70761967280.95387
[2026-01-09 08:36:48] 2026-01-09 09:46:44,613 | INFO     | mean x: 1767944002.5692308
[2026-01-09 08:36:48] 2026-01-09 09:46:44,613 | INFO     | mean y: 2655527.0807692306
[2026-01-09 08:36:48] 2026-01-09 09:46:44,613 | INFO     | intersect: 22958232085.47407
[2026-01-09 08:36:48] 2026-01-09 09:46:44,614 | INFO     | chi2: 0.37878178807704793
[2026-01-09 08:36:48] 2026-01-09 09:46:44,614 | INFO     | current chi2=0.37878178807704793 (change=86.56026423840662 %)
[2026-01-09 08:36:48] 2026-01-09 09:46:44,614 | INFO     | sum of square deviations: 5141311386.101988
[2026-01-09 08:36:48] 2026-01-09 09:46:44,615 | INFO     | sum of deviations: -78225746082.36864
[2026-01-09 08:36:48] 2026-01-09 09:46:44,615 | INFO     | mean x: 1767944155.0862746
[2026-01-09 08:36:48] 2026-01-09 09:46:44,616 | INFO     | mean y: 2659206.380392157
[2026-01-09 08:36:48] 2026-01-09 09:46:44,616 | INFO     | intersect: 26902167946.005924
[2026-01-09 08:36:48] 2026-01-09 09:46:44,616 | INFO     | chi2: 0.3142733677622277
[2026-01-09 08:36:48] 2026-01-09 09:46:44,616 | INFO     | current chi2=0.3142733677622277 (change=17.030496804587287 %)
[2026-01-09 08:36:48] 2026-01-09 09:46:44,616 | INFO     | left removable region: 20
[2026-01-09 08:36:48] 2026-01-09 09:46:44,616 | INFO     | sum of square deviations: 4232950250.384926
[2026-01-09 08:36:48] 2026-01-09 09:46:44,618 | INFO     | sum of deviations: -62302554468.02088
[2026-01-09 08:36:48] 2026-01-09 09:46:44,618 | INFO     | mean x: 1767944277.1046026
[2026-01-09 08:36:48] 2026-01-09 09:46:44,618 | INFO     | mean y: 2652442.20083682
[2026-01-09 08:36:48] 2026-01-09 09:46:44,618 | INFO     | intersect: 26024088581.38508
[2026-01-09 08:36:48] 2026-01-09 09:46:44,618 | INFO     | chi2: 0.30104909925519074
[2026-01-09 08:36:48] 2026-01-09 09:46:44,618 | INFO     | current memory leak: -14.72 B/s (using 239 data points, chi2=0.30)
[2026-01-09 08:36:48] 2026-01-09 09:46:44,619 | INFO     | could have reported an average CPU frequency of 3291 MHz (12 samples)
[2026-01-09 08:36:48] 2026-01-09 09:46:44,619 | INFO     | ..............................
[2026-01-09 08:36:48] 2026-01-09 09:46:44,619 | INFO     | . Timing measurements:
[2026-01-09 08:36:48] 2026-01-09 09:46:44,619 | INFO     | . get job = 1 s
[2026-01-09 08:36:48] 2026-01-09 09:46:44,619 | INFO     | . initial setup = 10 s
[2026-01-09 08:36:48] 2026-01-09 09:46:44,619 | INFO     | . payload setup = 54 s
[2026-01-09 08:36:48] 2026-01-09 09:46:44,619 | INFO     | . stage-in = 0 s
[2026-01-09 08:36:48] 2026-01-09 09:46:44,620 | INFO     | . payload execution = 16198 s
[2026-01-09 08:36:48] 2026-01-09 09:46:44,620 | INFO     | . stage-out = 4 s
[2026-01-09 08:36:48] 2026-01-09 09:46:44,620 | INFO     | . log creation = 1 s
[2026-01-09 08:36:48] 2026-01-09 09:46:44,620 | INFO     | ..............................
[2026-01-09 08:36:48] 2026-01-09 09:46:44,702 | INFO     | 
[2026-01-09 08:36:48] 2026-01-09 09:46:44,703 | INFO     | job summary report
[2026-01-09 08:36:48] 2026-01-09 09:46:44,703 | INFO     | --------------------------------------------------
[2026-01-09 08:36:48] 2026-01-09 09:46:44,703 | INFO     | PanDA job id: 6963152898
[2026-01-09 08:36:48] 2026-01-09 09:46:44,703 | INFO     | task id: 47898826
[2026-01-09 08:36:48] 2026-01-09 09:46:44,703 | INFO     | errors: (none)
[2026-01-09 08:36:48] 2026-01-09 09:46:44,703 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:36:48] 2026-01-09 09:46:44,703 | INFO     | pilot state: finished 
[2026-01-09 08:36:48] 2026-01-09 09:46:44,704 | INFO     | transexitcode: 0
[2026-01-09 08:36:48] 2026-01-09 09:46:44,704 | INFO     | exeerrorcode: 0
[2026-01-09 08:36:48] 2026-01-09 09:46:44,704 | INFO     | exeerrordiag: 
[2026-01-09 08:36:48] 2026-01-09 09:46:44,704 | INFO     | exitcode: 0
[2026-01-09 08:36:48] 2026-01-09 09:46:44,704 | INFO     | exitmsg: OK
[2026-01-09 08:36:48] 2026-01-09 09:46:44,704 | INFO     | cpuconsumptiontime: 46878 s
[2026-01-09 08:36:48] 2026-01-09 09:46:44,704 | INFO     | nevents: 400
[2026-01-09 08:36:48] 2026-01-09 09:46:44,704 | INFO     | neventsw: 0
[2026-01-09 08:36:48] 2026-01-09 09:46:44,704 | INFO     | pid: 197620
[2026-01-09 08:36:48] 2026-01-09 09:46:44,704 | INFO     | pgrp: 197620
[2026-01-09 08:36:48] 2026-01-09 09:46:44,704 | INFO     | corecount: 10
[2026-01-09 08:36:48] 2026-01-09 09:46:44,704 | INFO     | event service: False
[2026-01-09 08:36:48] 2026-01-09 09:46:44,704 | INFO     | sizes: {0: 2283797, 1: 2283996, 13: 2283996, 24: 2284052, 35: 2284080, 46: 2284108, 48: 2284526, 57: 2284554, 16257: 2316036, 16263: 2325034, 16264: 2325090, 16298
[2026-01-09 08:36:48] 2026-01-09 09:46:44,705 | INFO     | --------------------------------------------------
[2026-01-09 08:36:48] 2026-01-09 09:46:44,705 | INFO     | 
[2026-01-09 08:36:48] 2026-01-09 09:46:44,705 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 08:36:48] 2026-01-09 09:46:44,876 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,876 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,876 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,876 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,876 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,877 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,877 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,877 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,877 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,877 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,877 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,893 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,893 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,893 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,893 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,893 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:36:48] 2026-01-09 09:46:44,893 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,893 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:36:48] 2026-01-09 09:46:44,893 | INFO     | job 6963152898 has completed (purged errors)
[2026-01-09 08:36:48] 2026-01-09 09:46:44,893 | INFO     | overall cleanup function is called
[2026-01-09 08:36:48] 2026-01-09 09:46:45,923 | INFO     | --- collectZombieJob: --- 10, [197620]
[2026-01-09 08:36:48] 2026-01-09 09:46:45,923 | INFO     | zombie collector waiting for pid 197620
[2026-01-09 08:36:48] 2026-01-09 09:46:45,923 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:36:48] 2026-01-09 09:46:45,923 | INFO     | collected zombie processes
[2026-01-09 08:36:48] 2026-01-09 09:46:45,923 | INFO     | will attempt to kill all subprocesses of pid=197620
[2026-01-09 08:36:48] 2026-01-09 09:46:46,766 | INFO     | process IDs to be killed: [197620] (in reverse order)
[2026-01-09 08:36:48] 2026-01-09 09:46:47,798 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:36:48] 2026-01-09 09:46:47,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:36:48] 2026-01-09 09:46:47,899 | INFO     | did not find any defunct processes belonging to 197620
[2026-01-09 08:36:48] 2026-01-09 09:46:47,974 | INFO     | did not find any defunct processes belonging to 197620
[2026-01-09 08:36:48] 2026-01-09 09:46:47,974 | INFO     | ready for new job
[2026-01-09 08:36:48] 2026-01-09 09:46:47,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:36:48] 2026-01-09 09:46:47,978 | INFO     | ***************************************
[2026-01-09 08:36:48] 2026-01-09 09:46:47,978 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:36:48] 2026-01-09 09:46:47,978 | INFO     | ***************************************
[2026-01-09 08:36:48] 2026-01-09 09:46:47,978 | INFO     | 
[2026-01-09 08:36:48] 2026-01-09 09:46:48,014 | INFO     | architecture information:
[2026-01-09 08:36:48] 2026-01-09 09:46:48,039 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:36:48] 2026-01-09 09:46:48,218 | INFO     | cat /etc/os-release:
[2026-01-09 08:36:48] NAME="CentOS Linux"
[2026-01-09 08:36:48] VERSION="7 (Core)"
[2026-01-09 08:36:48] ID="centos"
[2026-01-09 08:36:48] ID_LIKE="rhel fedora"
[2026-01-09 08:36:48] VERSION_ID="7"
[2026-01-09 08:36:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:36:48] ANSI_COLOR="0;31"
[2026-01-09 08:36:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:36:48] HOME_URL="https://www.centos.org/"
[2026-01-09 08:36:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:36:48] 
[2026-01-09 08:36:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:36:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:36:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:36:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:36:48] 
[2026-01-09 08:36:48] 2026-01-09 09:46:48,218 | INFO     | ***************************************
[2026-01-09 08:36:48] 2026-01-09 09:46:48,722 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 08:36:48] 2026-01-09 09:46:48,903 | INFO     | sufficient remaining disk space (94738841600 B)
[2026-01-09 08:36:48] 2026-01-09 09:46:48,903 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:36:48] 2026-01-09 09:46:48,904 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:36:48] 2026-01-09 09:46:48,904 | INFO     | update_server=False
[2026-01-09 08:36:48] 2026-01-09 09:46:48,904 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:36:48] 2026-01-09 09:46:48,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:36:48] 2026-01-09 09:46:48,914 | INFO     | aborting loop
[2026-01-09 08:36:48] 2026-01-09 09:46:48,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:36:48] 2026-01-09 09:46:48,914 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:36:48] 2026-01-09 09:46:49,204 | INFO     | all data control threads have been joined
[2026-01-09 08:36:48] 2026-01-09 09:46:49,406 | INFO     | all payload control threads have been joined
[2026-01-09 08:36:48] 2026-01-09 09:46:49,717 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:36:48] 2026-01-09 09:46:49,909 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:36:48] 2026-01-09 09:46:49,922 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:36:48] 2026-01-09 09:46:50,021 | INFO     | all job control threads have been joined
[2026-01-09 08:36:48] 2026-01-09 09:46:50,211 | INFO     | [data] control thread has finished
[2026-01-09 08:36:48] 2026-01-09 09:46:50,412 | INFO     | [payload] control thread has finished
[2026-01-09 08:36:48] 2026-01-09 09:46:50,451 | INFO     | [job] validate thread has finished
[2026-01-09 08:36:48] 2026-01-09 09:46:50,499 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:36:48] 2026-01-09 09:46:50,602 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:36:48] 2026-01-09 09:46:50,704 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:36:48] 2026-01-09 09:46:50,723 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:36:48] 2026-01-09 09:46:50,924 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:36:48] 2026-01-09 09:46:50,945 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:36:48] 2026-01-09 09:46:50,980 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:36:48] 2026-01-09 09:46:51,027 | INFO     | [job] control thread has finished
[2026-01-09 08:36:48] 2026-01-09 09:46:51,105 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:36:48] 2026-01-09 09:46:52,926 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:36:48] 2026-01-09 09:46:55,760 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:36:48] 2026-01-09 09:46:59,049 | INFO     | job.realtimelogging is not enabled
[2026-01-09 08:36:48] 2026-01-09 09:47:00,055 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:36:48] 2026-01-09 09:47:00,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140009047787328)>', '<ExcThread(monitor, started 140008266651392)>']
[2026-01-09 08:36:48] 2026-01-09 09:47:05,298 | INFO     | all workflow threads have been joined
[2026-01-09 08:36:48] 2026-01-09 09:47:05,298 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:36:48] 2026-01-09 09:47:05,299 | INFO     | traces error code: 0
[2026-01-09 08:36:48] 2026-01-09 09:47:05,299 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:36:48] 2026-01-09 09:47:18,506 | INFO     | PID=187439 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 08:36:48] 2026-01-09 09:47:18,511 | INFO     | .. there are 12 such processes running
[2026-01-09 08:36:48] 2026-01-09 09:47:18,511 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:36:48] 2026-01-09 09:47:18,512 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:36:48] 2026-01-09 09:47:18,512 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:36:48] 2026-01-09 09:47:18,512 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:36:48] 2026-01-09 09:47:18,512 | INFO     | [monitor] control thread has ended
[2026-01-09 08:36:48] 2026-01-09 09:47:19,687 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:36:48] 2026-01-09 09:47:19,756 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:36:48] 2026-01-09 09:47:19,813 [wrapper] pilotpid: 187439
[2026-01-09 08:36:48] 2026-01-09 09:47:19,870 [wrapper] Pilot exit status: 0
[2026-01-09 08:36:48] 2026-01-09 09:47:20,064 [wrapper] pandaids: 6963152898
[2026-01-09 08:36:48] 2026-01-09 09:47:20,903 [wrapper] cleanup supervisor_pilot  573897 187440
[2026-01-09 08:36:48] 2026-01-09 09:47:20,943 [wrapper] Test setup, not cleaning
[2026-01-09 08:36:48] 2026-01-09 09:47:21,002 [wrapper] apfmon messages muted
[2026-01-09 08:36:48] 2026-01-09 09:47:21,052 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:36:48] 2026-01-09 09:47:21,097 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:36:48]  *** Error codes and diagnostics ***
[2026-01-09 08:36:48]     "exeErrorCode": 0,
[2026-01-09 08:36:48]     "exeErrorDiag": "",
[2026-01-09 08:36:48]     "pilotErrorCode": 0,
[2026-01-09 08:36:48]     "pilotErrorDiag": "",
[2026-01-09 08:36:48]  *** Listing of results directory ***
[2026-01-09 08:36:48] total 436120
[2026-01-09 08:36:48] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 08:36:48] -rwx------. 1 boincer umatlas     36322 Jan  8 11:07 runpilot2-wrapper.sh
[2026-01-09 08:36:48] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 08:36:48] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:36:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:11 run_atlas
[2026-01-09 08:36:48] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:11 job.xml
[2026-01-09 08:36:48] -rw-r--r--. 2 boincer umatlas 227361791 Jan  9 00:11 EVNT.47898824._001145.pool.root.1
[2026-01-09 08:36:48] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:11 start_atlas.sh
[2026-01-09 08:36:48] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:11 shared
[2026-01-09 08:36:48] -rw-r--r--. 2 boincer umatlas    592394 Jan  9 00:11 input.tar.gz
[2026-01-09 08:36:48] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:11 boinc_lockfile
[2026-01-09 08:36:48] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 00:11 pandaJob.out
[2026-01-09 08:36:48] -rw-------. 1 boincer umatlas        57 Jan  9 00:11 setup.sh.local
[2026-01-09 08:36:48] -rw-------. 1 boincer umatlas    989771 Jan  9 00:13 agis_schedconf.cvmfs.json
[2026-01-09 08:36:48] drwx------. 5 boincer umatlas      4096 Jan  9 00:13 pilot3
[2026-01-09 08:36:48] -rw-r--r--. 1 boincer umatlas       531 Jan  9 04:45 boinc_task_state.xml
[2026-01-09 08:36:48] -rw-------. 1 boincer umatlas 210296439 Jan  9 04:45 HITS.47898826._029600.pool.root.1
[2026-01-09 08:36:48] -rw-------. 1 boincer umatlas      1031 Jan  9 04:46 memory_monitor_summary.json
[2026-01-09 08:36:48] -rw-------. 1 boincer umatlas   1516240 Jan  9 04:46 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:36:48] -rw-------. 1 boincer umatlas    489721 Jan  9 04:46 log.47898826._029600.job.log.tgz.1
[2026-01-09 08:36:48] -rw-------. 1 boincer umatlas      7782 Jan  9 04:46 heartbeat.json
[2026-01-09 08:36:48] -rw-------. 1 boincer umatlas        95 Jan  9 04:47 pilot_heartbeat.json
[2026-01-09 08:36:48] -rw-------. 1 boincer umatlas       822 Jan  9 04:47 pilotlog.txt
[2026-01-09 08:36:48] -rw-------. 1 boincer umatlas   2015502 Jan  9 04:47 log.47898826._029600.job.log.1
[2026-01-09 08:36:48] -rw-------. 1 boincer umatlas       357 Jan  9 04:47 output.list
[2026-01-09 08:36:48] -rw-r--r--. 1 boincer umatlas       620 Jan  9 04:47 runtime_log
[2026-01-09 08:36:48] -rw-------. 1 boincer umatlas   2529280 Jan  9 04:47 result.tar.gz
[2026-01-09 08:36:48] -rw-r--r--. 1 boincer umatlas      9345 Jan  9 04:47 runtime_log.err
[2026-01-09 08:36:48] -rw-------. 1 boincer umatlas       656 Jan  9 04:47 L01LDmZi7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmItfKDmPKvu3m.diag
[2026-01-09 08:36:48] -rw-r--r--. 1 boincer umatlas      6904 Jan  9 08:31 init_data.xml
[2026-01-09 08:36:48] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 08:36 boinc_mmap_file
[2026-01-09 08:36:48] -rw-r--r--. 1 boincer umatlas     21435 Jan  9 08:36 stderr.txt
[2026-01-09 08:36:48] -rw-r--r--. 1 boincer umatlas        27 Jan  9 08:36 wrapper_checkpoint.txt
[2026-01-09 08:36:48] HITS file was successfully produced:
[2026-01-09 08:36:48] -rw-------. 1 boincer umatlas 210296439 Jan  9 04:45 shared/HITS.pool.root.1
[2026-01-09 08:36:48]  *** Contents of shared directory: ***
[2026-01-09 08:36:48] total 430476
[2026-01-09 08:36:48] -rw-r--r--. 2 boincer umatlas 227361791 Jan  9 00:11 ATLAS.root_0
[2026-01-09 08:36:48] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:11 start_atlas.sh
[2026-01-09 08:36:48] -rw-r--r--. 2 boincer umatlas    592394 Jan  9 00:11 input.tar.gz
[2026-01-09 08:36:48] -rw-------. 1 boincer umatlas 210296439 Jan  9 04:45 HITS.pool.root.1
[2026-01-09 08:36:48] -rw-------. 1 boincer umatlas   2529280 Jan  9 04:47 result.tar.gz
08:36:50 (176928): run_atlas exited; CPU time 47139.894451
08:36:50 (176928): called boinc_finish(0)

</stderr_txt>
]]>

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