Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:09:29 (2707296): wrapper (7.7.26015): starting
00:09:29 (2707296): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 00:09:29] Arguments: --nthreads 9
[2026-01-09 00:09:29] Threads: 9
[2026-01-09 00:09:29] Checking for CVMFS
[2026-01-09 00:09:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:09:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:09:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:09:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:09:33] 2.13.3.0 12257 92922 676988 154931 0 288 25880146 32935937 56070 16776704 0 634065667 99.726 427913730 23346 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:09:33] CVMFS is ok
[2026-01-09 00:09:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:09:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:09:34] Further information can be found at the LHC@home message board.
[2026-01-09 00:09:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:09:34] Checking for apptainer binary...
[2026-01-09 00:09:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:09:34] Running /usr/bin/apptainer --version
[2026-01-09 00:09:34] apptainer version 1.4.5-2.el9
[2026-01-09 00:09:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:09:36] c-1-3.aglt2.org
[2026-01-09 00:09:36] apptainer works
[2026-01-09 00:09:36] Set ATHENA_PROC_NUMBER=9
[2026-01-09 00:09:36] Set ATHENA_CORE_NUMBER=9
[2026-01-09 00:09:36] Starting ATLAS job with PandaID=6963152688
[2026-01-09 00:09:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 15:00:42]  *** The last 200 lines of the pilot log: ***
[2026-01-09 15:00:42] 2026-01-09 18:03:32,662 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 1766.2811625000002
[2026-01-09 15:00:42] 2026-01-09 18:03:32,738 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6963152688/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 15:00:42] 2026-01-09 18:03:32,739 | INFO     | extracted standard info from prmon json
[2026-01-09 15:00:42] 2026-01-09 18:03:32,739 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 15:00:42] 2026-01-09 18:03:32,740 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 15:00:42] 2026-01-09 18:03:32,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 15:00:42] 2026-01-09 18:03:32,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 15:00:42] 2026-01-09 18:03:32,828 | INFO     | fitting pss+swap vs Time
[2026-01-09 15:00:42] 2026-01-09 18:03:32,841 | INFO     | sum of square deviations: 132919057831.62471
[2026-01-09 15:00:42] 2026-01-09 18:03:32,962 | INFO     | sum of deviations: 331337357941.0242
[2026-01-09 15:00:42] 2026-01-09 18:03:32,962 | INFO     | mean x: 1767958731.250663
[2026-01-09 15:00:42] 2026-01-09 18:03:32,963 | INFO     | mean y: 2504142.449602122
[2026-01-09 15:00:42] 2026-01-09 18:03:32,963 | INFO     | intersect: -4404619896.177053
[2026-01-09 15:00:42] 2026-01-09 18:03:32,964 | INFO     | chi2: 11.033834016972941
[2026-01-09 15:00:42] 2026-01-09 18:03:32,983 | INFO     | sum of square deviations: 130292418416.28816
[2026-01-09 15:00:42] 2026-01-09 18:03:33,161 | INFO     | sum of deviations: 570565979992.435
[2026-01-09 15:00:42] 2026-01-09 18:03:33,161 | INFO     | mean x: 1767958578.7556741
[2026-01-09 15:00:42] 2026-01-09 18:03:33,161 | INFO     | mean y: 2518031.603471295
[2026-01-09 15:00:42] 2026-01-09 18:03:33,161 | INFO     | intersect: -7739582631.927226
[2026-01-09 15:00:42] 2026-01-09 18:03:33,186 | INFO     | monitor loop #1551: job 0:6963152688 is in state 'finished'
[2026-01-09 15:00:42] 2026-01-09 18:03:33,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:00:42] 2026-01-09 18:03:33,195 | INFO     | chi2: 7.501861047849022
[2026-01-09 15:00:42] 2026-01-09 18:03:33,195 | INFO     | current chi2=7.501861047849022 (change=32.010386994138344 %)
[2026-01-09 15:00:42] 2026-01-09 18:03:33,197 | INFO     | sum of square deviations: 127700525608.4515
[2026-01-09 15:00:42] 2026-01-09 18:03:33,371 | INFO     | sum of deviations: 667469923211.2261
[2026-01-09 15:00:42] 2026-01-09 18:03:33,372 | INFO     | mean x: 1767958426.2580645
[2026-01-09 15:00:42] 2026-01-09 18:03:33,372 | INFO     | mean y: 2523709.4623655914
[2026-01-09 15:00:42] 2026-01-09 18:03:33,372 | INFO     | intersect: -9238308067.795498
[2026-01-09 15:00:42] 2026-01-09 18:03:33,399 | INFO     | chi2: 5.992547058157846
[2026-01-09 15:00:42] 2026-01-09 18:03:33,399 | INFO     | current chi2=5.992547058157846 (change=20.119194158147412 %)
[2026-01-09 15:00:42] 2026-01-09 18:03:33,400 | INFO     | right removable region: 743
[2026-01-09 15:00:42] 2026-01-09 18:03:33,401 | INFO     | sum of square deviations: 130292164901.30545
[2026-01-09 15:00:42] 2026-01-09 18:03:33,541 | INFO     | sum of deviations: 85700989089.12431
[2026-01-09 15:00:42] 2026-01-09 18:03:33,555 | INFO     | mean x: 1767958883.753004
[2026-01-09 15:00:42] 2026-01-09 18:03:33,555 | INFO     | mean y: 2518396.6114819758
[2026-01-09 15:00:42] 2026-01-09 18:03:33,555 | INFO     | intersect: -1160374438.282372
[2026-01-09 15:00:42] 2026-01-09 18:03:33,563 | INFO     | chi2: 7.300957368937221
[2026-01-09 15:00:42] 2026-01-09 18:03:33,564 | INFO     | current chi2=7.300957368937221 (change=33.83118363293823 %)
[2026-01-09 15:00:42] 2026-01-09 18:03:33,565 | INFO     | sum of square deviations: 127700155644.98799
[2026-01-09 15:00:42] 2026-01-09 18:03:33,681 | INFO     | sum of deviations: -68411542809.040146
[2026-01-09 15:00:42] 2026-01-09 18:03:33,682 | INFO     | mean x: 1767959036.2540324
[2026-01-09 15:00:42] 2026-01-09 18:03:33,682 | INFO     | mean y: 2527457.180107527
[2026-01-09 15:00:42] 2026-01-09 18:03:33,682 | INFO     | intersect: 949658685.6616535
[2026-01-09 15:00:42] 2026-01-09 18:03:33,683 | INFO     | chi2: 5.8363173434374955
[2026-01-09 15:00:42] 2026-01-09 18:03:33,684 | INFO     | current chi2=5.8363173434374955 (change=20.060931073659024 %)
[2026-01-09 15:00:42] 2026-01-09 18:03:33,708 | INFO     | left removable region: 20
[2026-01-09 15:00:42] 2026-01-09 18:03:33,709 | INFO     | sum of square deviations: 117189169690.96277
[2026-01-09 15:00:42] 2026-01-09 18:03:33,810 | INFO     | sum of deviations: 136686726739.36523
[2026-01-09 15:00:42] 2026-01-09 18:03:33,811 | INFO     | mean x: 1767959005.7676349
[2026-01-09 15:00:42] 2026-01-09 18:03:33,811 | INFO     | mean y: 2555704.716459198
[2026-01-09 15:00:42] 2026-01-09 18:03:33,811 | INFO     | intersect: -2059550632.7977343
[2026-01-09 15:00:42] 2026-01-09 18:03:33,840 | INFO     | chi2: 0.17399249333442532
[2026-01-09 15:00:42] 2026-01-09 18:03:33,840 | INFO     | current memory leak: 1.17 B/s (using 723 data points, chi2=0.17)
[2026-01-09 15:00:42] 2026-01-09 18:03:33,841 | INFO     | could have reported an average CPU frequency of 1752 MHz (28 samples)
[2026-01-09 15:00:42] 2026-01-09 18:03:33,842 | INFO     | ..............................
[2026-01-09 15:00:42] 2026-01-09 18:03:33,842 | INFO     | . Timing measurements:
[2026-01-09 15:00:42] 2026-01-09 18:03:33,842 | INFO     | . get job = 1 s
[2026-01-09 15:00:42] 2026-01-09 18:03:33,842 | INFO     | . initial setup = 13 s
[2026-01-09 15:00:42] 2026-01-09 18:03:33,842 | INFO     | . payload setup = 87 s
[2026-01-09 15:00:42] 2026-01-09 18:03:33,842 | INFO     | . stage-in = 1 s
[2026-01-09 15:00:42] 2026-01-09 18:03:33,842 | INFO     | . payload execution = 46005 s
[2026-01-09 15:00:42] 2026-01-09 18:03:33,842 | INFO     | . stage-out = 8 s
[2026-01-09 15:00:42] 2026-01-09 18:03:33,843 | INFO     | . log creation = 2 s
[2026-01-09 15:00:42] 2026-01-09 18:03:33,868 | INFO     | ..............................
[2026-01-09 15:00:42] 2026-01-09 18:03:34,302 | INFO     | time since job start (46309s) is within the limit (349056.0s)
[2026-01-09 15:00:42] 2026-01-09 18:03:34,984 | INFO     | 
[2026-01-09 15:00:42] 2026-01-09 18:03:34,984 | INFO     | job summary report
[2026-01-09 15:00:42] 2026-01-09 18:03:34,984 | INFO     | --------------------------------------------------
[2026-01-09 15:00:42] 2026-01-09 18:03:34,984 | INFO     | PanDA job id: 6963152688
[2026-01-09 15:00:42] 2026-01-09 18:03:34,985 | INFO     | task id: 47898826
[2026-01-09 15:00:42] 2026-01-09 18:03:34,985 | INFO     | errors: (none)
[2026-01-09 15:00:42] 2026-01-09 18:03:34,985 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 15:00:42] 2026-01-09 18:03:34,985 | INFO     | pilot state: finished 
[2026-01-09 15:00:42] 2026-01-09 18:03:34,985 | INFO     | transexitcode: 0
[2026-01-09 15:00:42] 2026-01-09 18:03:34,985 | INFO     | exeerrorcode: 0
[2026-01-09 15:00:42] 2026-01-09 18:03:34,985 | INFO     | exeerrordiag: 
[2026-01-09 15:00:42] 2026-01-09 18:03:34,985 | INFO     | exitcode: 0
[2026-01-09 15:00:42] 2026-01-09 18:03:34,986 | INFO     | exitmsg: OK
[2026-01-09 15:00:42] 2026-01-09 18:03:34,986 | INFO     | cpuconsumptiontime: 102861 s
[2026-01-09 15:00:42] 2026-01-09 18:03:34,986 | INFO     | nevents: 400
[2026-01-09 15:00:42] 2026-01-09 18:03:34,986 | INFO     | neventsw: 0
[2026-01-09 15:00:42] 2026-01-09 18:03:34,986 | INFO     | pid: 2764818
[2026-01-09 15:00:42] 2026-01-09 18:03:34,986 | INFO     | pgrp: 2764818
[2026-01-09 15:00:42] 2026-01-09 18:03:34,986 | INFO     | corecount: 9
[2026-01-09 15:00:42] 2026-01-09 18:03:34,986 | INFO     | event service: False
[2026-01-09 15:00:42] 2026-01-09 18:03:34,986 | INFO     | sizes: {0: 2283140, 1: 2283741, 2: 2283825, 4: 2283853, 6: 2284052, 7: 2284080, 9: 2284236, 21: 2284264, 32: 2284292, 44: 2284320, 54: 2284610, 57: 2284918, 46099:
[2026-01-09 15:00:42] 2026-01-09 18:03:34,987 | INFO     | --------------------------------------------------
[2026-01-09 15:00:42] 2026-01-09 18:03:35,003 | INFO     | 
[2026-01-09 15:00:42] 2026-01-09 18:03:35,003 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-09 15:00:42] 2026-01-09 18:03:35,205 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,206 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,206 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,206 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,206 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,206 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,207 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,207 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,207 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,207 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,207 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,207 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,207 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,207 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,208 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,208 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,208 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,208 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 15:00:42] 2026-01-09 18:03:35,208 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,208 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 15:00:42] 2026-01-09 18:03:35,208 | INFO     | job 6963152688 has completed (purged errors)
[2026-01-09 15:00:42] 2026-01-09 18:03:35,209 | INFO     | overall cleanup function is called
[2026-01-09 15:00:42] 2026-01-09 18:03:36,220 | INFO     | --- collectZombieJob: --- 10, [2764818]
[2026-01-09 15:00:42] 2026-01-09 18:03:36,220 | INFO     | zombie collector waiting for pid 2764818
[2026-01-09 15:00:42] 2026-01-09 18:03:36,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 15:00:42] 2026-01-09 18:03:36,220 | INFO     | collected zombie processes
[2026-01-09 15:00:42] 2026-01-09 18:03:36,221 | INFO     | will attempt to kill all subprocesses of pid=2764818
[2026-01-09 15:00:42] 2026-01-09 18:03:44,815 | INFO     | process IDs to be killed: [2764818] (in reverse order)
[2026-01-09 15:00:42] 2026-01-09 18:03:46,625 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 15:00:42] 2026-01-09 18:03:46,627 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 15:00:42] 2026-01-09 18:03:46,866 | INFO     | did not find any defunct processes belonging to 2764818
[2026-01-09 15:00:42] 2026-01-09 18:03:47,076 | INFO     | did not find any defunct processes belonging to 2764818
[2026-01-09 15:00:42] 2026-01-09 18:03:47,076 | INFO     | ready for new job
[2026-01-09 15:00:42] 2026-01-09 18:03:47,076 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 15:00:42] 2026-01-09 18:03:47,113 | INFO     | ***************************************
[2026-01-09 15:00:42] 2026-01-09 18:03:47,113 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 15:00:42] 2026-01-09 18:03:47,113 | INFO     | ***************************************
[2026-01-09 15:00:42] 2026-01-09 18:03:47,113 | INFO     | 
[2026-01-09 15:00:42] 2026-01-09 18:03:47,171 | INFO     | architecture information:
[2026-01-09 15:00:42] 2026-01-09 18:03:47,180 | INFO     | executing command: cat /etc/os-release
[2026-01-09 15:00:42] 2026-01-09 18:03:47,323 | INFO     | cat /etc/os-release:
[2026-01-09 15:00:42] NAME="CentOS Linux"
[2026-01-09 15:00:42] VERSION="7 (Core)"
[2026-01-09 15:00:42] ID="centos"
[2026-01-09 15:00:42] ID_LIKE="rhel fedora"
[2026-01-09 15:00:42] VERSION_ID="7"
[2026-01-09 15:00:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 15:00:42] ANSI_COLOR="0;31"
[2026-01-09 15:00:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 15:00:42] HOME_URL="https://www.centos.org/"
[2026-01-09 15:00:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 15:00:42] 
[2026-01-09 15:00:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 15:00:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 15:00:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 15:00:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 15:00:42] 
[2026-01-09 15:00:42] 2026-01-09 18:03:47,324 | INFO     | ***************************************
[2026-01-09 15:00:42] 2026-01-09 18:03:47,836 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-09 15:00:42] 2026-01-09 18:03:48,033 | INFO     | sufficient remaining disk space (71482474496 B)
[2026-01-09 15:00:42] 2026-01-09 18:03:48,033 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 15:00:42] 2026-01-09 18:03:48,034 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 15:00:42] 2026-01-09 18:03:48,034 | INFO     | update_server=False
[2026-01-09 15:00:42] 2026-01-09 18:03:48,034 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 15:00:42] 2026-01-09 18:03:48,049 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:00:42] 2026-01-09 18:03:48,049 | INFO     | aborting loop
[2026-01-09 15:00:42] 2026-01-09 18:03:48,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 15:00:42] 2026-01-09 18:03:48,057 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:00:42] 2026-01-09 18:03:48,437 | INFO     | all payload control threads have been joined
[2026-01-09 15:00:42] 2026-01-09 18:03:48,856 | INFO     | all job control threads have been joined
[2026-01-09 15:00:42] 2026-01-09 18:03:48,954 | INFO     | all data control threads have been joined
[2026-01-09 15:00:42] 2026-01-09 18:03:49,040 | INFO     | [job] retrieve thread has finished
[2026-01-09 15:00:42] 2026-01-09 18:03:49,054 | INFO     | [job] job monitor thread has finished
[2026-01-09 15:00:42] 2026-01-09 18:03:49,066 | INFO     | [job] queue monitor thread has finished
[2026-01-09 15:00:42] 2026-01-09 18:03:49,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 15:00:42] 2026-01-09 18:03:49,235 | INFO     | [job] validate thread has finished
[2026-01-09 15:00:42] 2026-01-09 18:03:49,241 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 15:00:42] 2026-01-09 18:03:49,243 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 15:00:42] 2026-01-09 18:03:49,246 | INFO     | [data] copytool_in thread has finished
[2026-01-09 15:00:42] 2026-01-09 18:03:49,443 | INFO     | [payload] control thread has finished
[2026-01-09 15:00:42] 2026-01-09 18:03:49,521 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 15:00:42] 2026-01-09 18:03:49,595 | INFO     | [payload] validate_post thread has finished
[2026-01-09 15:00:42] 2026-01-09 18:03:49,878 | INFO     | [job] control thread has finished
[2026-01-09 15:00:42] 2026-01-09 18:03:49,960 | INFO     | [data] control thread has finished
[2026-01-09 15:00:42] 2026-01-09 18:03:50,072 | INFO     | [data] copytool_out thread has finished
[2026-01-09 15:00:42] 2026-01-09 18:03:50,362 | INFO     | [payload] failed_post thread has finished
[2026-01-09 15:00:42] 2026-01-09 18:03:50,443 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 15:00:42] 2026-01-09 18:03:53,224 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 15:00:42] 2026-01-09 18:04:16,099 | INFO     | PID=2723746 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 15:00:42] 2026-01-09 18:04:16,100 | INFO     | .. there are 84 such processes running
[2026-01-09 15:00:42] 2026-01-09 18:04:16,100 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 15:00:42] 2026-01-09 18:04:16,100 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 15:00:42] 2026-01-09 18:04:16,100 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 15:00:42] 2026-01-09 18:04:16,400 | INFO     | [monitor] cgroup control has ended
[2026-01-09 15:00:42] 2026-01-09 18:04:18,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140442460444480)>', '<ExcThread(monitor, started 140442108671744)>']
[2026-01-09 15:00:42] 2026-01-09 18:04:19,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 15:00:42] 2026-01-09 18:04:19,118 | INFO     | [monitor] control thread has ended
[2026-01-09 15:00:42] 2026-01-09 18:04:23,227 | INFO     | all workflow threads have been joined
[2026-01-09 15:00:42] 2026-01-09 18:04:23,227 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 15:00:42] 2026-01-09 18:04:23,228 | INFO     | traces error code: 0
[2026-01-09 15:00:42] 2026-01-09 18:04:23,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 15:00:42] 2026-01-09 18:04:24,116 [wrapper] ==== pilot stdout END ====
[2026-01-09 15:00:42] 2026-01-09 18:04:24,140 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 15:00:42] 2026-01-09 18:04:24,184 [wrapper] pilotpid: 2723746
[2026-01-09 15:00:42] 2026-01-09 18:04:24,237 [wrapper] Pilot exit status: 0
[2026-01-09 15:00:42] 2026-01-09 18:04:24,901 [wrapper] pandaids: 6963152688
[2026-01-09 15:00:42] 2026-01-09 18:04:26,651 [wrapper] cleanup supervisor_pilot  483455 2723747
[2026-01-09 15:00:42] 2026-01-09 18:04:26,670 [wrapper] Test setup, not cleaning
[2026-01-09 15:00:42] 2026-01-09 18:04:26,717 [wrapper] apfmon messages muted
[2026-01-09 15:00:42] 2026-01-09 18:04:26,753 [wrapper] ==== wrapper stdout END ====
[2026-01-09 15:00:42] 2026-01-09 18:04:26,783 [wrapper] ==== wrapper stderr END ====
[2026-01-09 15:00:42]  *** Error codes and diagnostics ***
[2026-01-09 15:00:42]     "exeErrorCode": 0,
[2026-01-09 15:00:42]     "exeErrorDiag": "",
[2026-01-09 15:00:42]     "pilotErrorCode": 0,
[2026-01-09 15:00:42]     "pilotErrorDiag": "",
[2026-01-09 15:00:42]  *** Listing of results directory ***
[2026-01-09 15:00:42] total 447856
[2026-01-09 15:00:42] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 15:00:42] -rwx------. 1 boincer umatlas     36322 Jan  8 11:06 runpilot2-wrapper.sh
[2026-01-09 15:00:42] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 15:00:42] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 15:00:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:09 run_atlas
[2026-01-09 15:00:42] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:09 job.xml
[2026-01-09 15:00:42] -rw-r--r--. 2 boincer umatlas 224282545 Jan  9 00:09 EVNT.47898824._000878.pool.root.1
[2026-01-09 15:00:42] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:09 start_atlas.sh
[2026-01-09 15:00:42] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:09 shared
[2026-01-09 15:00:42] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 00:09 input.tar.gz
[2026-01-09 15:00:42] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:09 boinc_lockfile
[2026-01-09 15:00:42] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 00:09 pandaJob.out
[2026-01-09 15:00:42] -rw-------. 1 boincer umatlas        57 Jan  9 00:09 setup.sh.local
[2026-01-09 15:00:42] -rw-------. 1 boincer umatlas    989771 Jan  9 00:11 agis_schedconf.cvmfs.json
[2026-01-09 15:00:42] drwx------. 5 boincer umatlas      4096 Jan  9 00:11 pilot3
[2026-01-09 15:00:42] -rw-------. 1 boincer umatlas 220880819 Jan  9 12:54 HITS.47898826._029446.pool.root.1
[2026-01-09 15:00:42] -rw-r--r--. 1 boincer umatlas       531 Jan  9 12:54 boinc_task_state.xml
[2026-01-09 15:00:42] -rw-------. 1 boincer umatlas      1046 Jan  9 13:01 memory_monitor_summary.json
[2026-01-09 15:00:42] -rw-------. 1 boincer umatlas   1516240 Jan  9 13:02 agis_ddmendpoints.agis.ALL.json
[2026-01-09 15:00:42] -rw-------. 1 boincer umatlas    768340 Jan  9 13:02 log.47898826._029446.job.log.tgz.1
[2026-01-09 15:00:42] -rw-------. 1 boincer umatlas        95 Jan  9 13:03 pilot_heartbeat.json
[2026-01-09 15:00:42] -rw-------. 1 boincer umatlas      7827 Jan  9 13:03 heartbeat.json
[2026-01-09 15:00:42] -rw-------. 1 boincer umatlas      4824 Jan  9 13:04 pilotlog.txt
[2026-01-09 15:00:42] -rw-------. 1 boincer umatlas   3991687 Jan  9 13:04 log.47898826._029446.job.log.1
[2026-01-09 15:00:42] -rw-------. 1 boincer umatlas       357 Jan  9 13:04 output.list
[2026-01-09 15:00:42] -rw-r--r--. 1 boincer umatlas       620 Jan  9 13:04 runtime_log
[2026-01-09 15:00:42] -rw-------. 1 boincer umatlas   4782080 Jan  9 13:04 result.tar.gz
[2026-01-09 15:00:42] -rw-r--r--. 1 boincer umatlas      9328 Jan  9 13:04 runtime_log.err
[2026-01-09 15:00:42] -rw-------. 1 boincer umatlas       658 Jan  9 13:04 PnvKDmNi7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXsfKDmHV13Pm.diag
[2026-01-09 15:00:42] -rw-r--r--. 1 boincer umatlas      6839 Jan  9 14:58 init_data.xml
[2026-01-09 15:00:42] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 15:00 boinc_mmap_file
[2026-01-09 15:00:42] -rw-r--r--. 1 boincer umatlas        28 Jan  9 15:00 wrapper_checkpoint.txt
[2026-01-09 15:00:42] -rw-r--r--. 1 boincer umatlas     21267 Jan  9 15:00 stderr.txt
[2026-01-09 15:00:42] HITS file was successfully produced:
[2026-01-09 15:00:42] -rw-------. 1 boincer umatlas 220880819 Jan  9 12:54 shared/HITS.pool.root.1
[2026-01-09 15:00:42]  *** Contents of shared directory: ***
[2026-01-09 15:00:42] total 440008
[2026-01-09 15:00:42] -rw-r--r--. 2 boincer umatlas 224282545 Jan  9 00:09 ATLAS.root_0
[2026-01-09 15:00:42] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:09 start_atlas.sh
[2026-01-09 15:00:42] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 00:09 input.tar.gz
[2026-01-09 15:00:42] -rw-------. 1 boincer umatlas 220880819 Jan  9 12:54 HITS.pool.root.1
[2026-01-09 15:00:42] -rw-------. 1 boincer umatlas   4782080 Jan  9 13:04 result.tar.gz
15:00:44 (2707296): run_atlas exited; CPU time 106094.480039
15:00:44 (2707296): called boinc_finish(0)

</stderr_txt>
]]>

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