Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:09:47 (2735045): wrapper (7.7.26015): starting
00:09:47 (2735045): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:09:47] Arguments: --nthreads 12
[2026-01-09 00:09:47] Threads: 12
[2026-01-09 00:09:47] Checking for CVMFS
[2026-01-09 00:09:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:09:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:09:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:09:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:09:50] 2.13.3.0 10119 21069 161616 154932 3 14 34105018 39288833 7425 16776704 0 9398145 99.556 14682254 42907 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:09:50] CVMFS is ok
[2026-01-09 00:09:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:09:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:09:50] Further information can be found at the LHC@home message board.
[2026-01-09 00:09:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:09:50] Checking for apptainer binary...
[2026-01-09 00:09:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:09:50] Running /usr/bin/apptainer --version
[2026-01-09 00:09:51] apptainer version 1.4.5-2.el9
[2026-01-09 00:09:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:09:53] c-210-1.aglt2.org
[2026-01-09 00:09:53] apptainer works
[2026-01-09 00:09:53] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:09:53] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:09:53] Starting ATLAS job with PandaID=6963152866
[2026-01-09 00:09:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:04:13]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:04:13] 2026-01-09 17:23:22,612 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.065425
[2026-01-09 13:04:13] 2026-01-09 17:23:22,647 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963152866/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:04:13] 2026-01-09 17:23:22,648 | INFO     | extracted standard info from prmon json
[2026-01-09 13:04:13] 2026-01-09 17:23:22,648 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:04:13] 2026-01-09 17:23:22,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:04:13] 2026-01-09 17:23:22,648 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:04:13] 2026-01-09 17:23:22,648 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:04:13] 2026-01-09 17:23:22,834 | INFO     | time since job start (43901s) is within the limit (349056.0s)
[2026-01-09 13:04:13] 2026-01-09 17:23:22,835 | INFO     | fitting pss+swap vs Time
[2026-01-09 13:04:13] 2026-01-09 17:23:22,836 | INFO     | sum of square deviations: 113831195566.15607
[2026-01-09 13:04:13] 2026-01-09 17:23:22,860 | INFO     | sum of deviations: 284157360864.5248
[2026-01-09 13:04:13] 2026-01-09 17:23:22,860 | INFO     | mean x: 1767957504.4022346
[2026-01-09 13:04:13] 2026-01-09 17:23:22,860 | INFO     | mean y: 2639933.4217877095
[2026-01-09 13:04:13] 2026-01-09 17:23:22,861 | INFO     | intersect: -4410720886.28075
[2026-01-09 13:04:13] 2026-01-09 17:23:22,862 | INFO     | chi2: 7.746750434931544
[2026-01-09 13:04:13] 2026-01-09 17:23:22,863 | INFO     | sum of square deviations: 111463908931.58922
[2026-01-09 13:04:13] 2026-01-09 17:23:22,887 | INFO     | sum of deviations: 480931376915.2632
[2026-01-09 13:04:13] 2026-01-09 17:23:22,887 | INFO     | mean x: 1767957351.9212377
[2026-01-09 13:04:13] 2026-01-09 17:23:22,887 | INFO     | mean y: 2652591.2011251757
[2026-01-09 13:04:13] 2026-01-09 17:23:22,887 | INFO     | intersect: -7625522050.590711
[2026-01-09 13:04:13] 2026-01-09 17:23:22,904 | INFO     | chi2: 4.798240253506451
[2026-01-09 13:04:13] 2026-01-09 17:23:22,905 | INFO     | current chi2=4.798240253506451 (change=38.06125169761129 %)
[2026-01-09 13:04:13] 2026-01-09 17:23:22,927 | INFO     | sum of square deviations: 109129475851.37163
[2026-01-09 13:04:13] 2026-01-09 17:23:23,125 | INFO     | sum of deviations: 476026917636.57965
[2026-01-09 13:04:13] 2026-01-09 17:23:23,125 | INFO     | mean x: 1767957199.4334278
[2026-01-09 13:04:13] 2026-01-09 17:23:23,125 | INFO     | mean y: 2652270.8314447594
[2026-01-09 13:04:13] 2026-01-09 17:23:23,125 | INFO     | intersect: -7709244167.724725
[2026-01-09 13:04:13] 2026-01-09 17:23:23,126 | INFO     | chi2: 4.798871131202522
[2026-01-09 13:04:13] 2026-01-09 17:23:23,126 | INFO     | current chi2=4.798871131202522 (change=-0.01314810561246048 %)
[2026-01-09 13:04:13] 2026-01-09 17:23:23,126 | INFO     | right removable region: 705
[2026-01-09 13:04:13] 2026-01-09 17:23:23,127 | INFO     | sum of square deviations: 111462684778.74532
[2026-01-09 13:04:13] 2026-01-09 17:23:23,456 | INFO     | monitor loop #2456: job 0:6963152866 is in state 'finished'
[2026-01-09 13:04:13] 2026-01-09 17:23:23,457 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 13:04:13] 2026-01-09 17:23:23,466 | INFO     | sum of deviations: 43976223804.43616
[2026-01-09 13:04:13] 2026-01-09 17:23:23,466 | INFO     | mean x: 1767957656.9226441
[2026-01-09 13:04:13] 2026-01-09 17:23:23,466 | INFO     | mean y: 2655391.917018284
[2026-01-09 13:04:13] 2026-01-09 17:23:23,466 | INFO     | intersect: -694870437.0357618
[2026-01-09 13:04:13] 2026-01-09 17:23:23,566 | INFO     | chi2: 4.164979230505604
[2026-01-09 13:04:13] 2026-01-09 17:23:23,566 | INFO     | current chi2=4.164979230505604 (change=46.235789244933784 %)
[2026-01-09 13:04:13] 2026-01-09 17:23:23,567 | INFO     | sum of square deviations: 109127504629.50287
[2026-01-09 13:04:13] 2026-01-09 17:23:23,728 | INFO     | sum of deviations: -65143437666.08783
[2026-01-09 13:04:13] 2026-01-09 17:23:23,729 | INFO     | mean x: 1767957809.4348443
[2026-01-09 13:04:13] 2026-01-09 17:23:23,729 | INFO     | mean y: 2662509.0198300285
[2026-01-09 13:04:13] 2026-01-09 17:23:23,729 | INFO     | intersect: 1058041258.3663559
[2026-01-09 13:04:13] 2026-01-09 17:23:23,754 | INFO     | chi2: 3.363927317917795
[2026-01-09 13:04:13] 2026-01-09 17:23:23,754 | INFO     | current chi2=3.363927317917795 (change=19.23303498660102 %)
[2026-01-09 13:04:13] 2026-01-09 17:23:23,754 | INFO     | left removable region: 20
[2026-01-09 13:04:13] 2026-01-09 17:23:23,755 | INFO     | sum of square deviations: 99677877169.71396
[2026-01-09 13:04:13] 2026-01-09 17:23:23,829 | INFO     | sum of deviations: 46123623355.06276
[2026-01-09 13:04:13] 2026-01-09 17:23:23,829 | INFO     | mean x: 1767957778.979562
[2026-01-09 13:04:13] 2026-01-09 17:23:23,829 | INFO     | mean y: 2680977.0759124085
[2026-01-09 13:04:13] 2026-01-09 17:23:23,854 | INFO     | intersect: -815400436.9821616
[2026-01-09 13:04:13] 2026-01-09 17:23:23,855 | INFO     | chi2: 0.14193190306413256
[2026-01-09 13:04:13] 2026-01-09 17:23:23,855 | INFO     | current memory leak: 0.46 B/s (using 685 data points, chi2=0.14)
[2026-01-09 13:04:13] 2026-01-09 17:23:23,856 | INFO     | could have reported an average CPU frequency of 2600 MHz (27 samples)
[2026-01-09 13:04:13] 2026-01-09 17:23:23,856 | INFO     | ..............................
[2026-01-09 13:04:13] 2026-01-09 17:23:23,856 | INFO     | . Timing measurements:
[2026-01-09 13:04:13] 2026-01-09 17:23:23,856 | INFO     | . get job = 1 s
[2026-01-09 13:04:13] 2026-01-09 17:23:23,856 | INFO     | . initial setup = 5 s
[2026-01-09 13:04:13] 2026-01-09 17:23:23,857 | INFO     | . payload setup = 56 s
[2026-01-09 13:04:13] 2026-01-09 17:23:23,857 | INFO     | . stage-in = 1 s
[2026-01-09 13:04:13] 2026-01-09 17:23:23,857 | INFO     | . payload execution = 43674 s
[2026-01-09 13:04:13] 2026-01-09 17:23:23,857 | INFO     | . stage-out = 11 s
[2026-01-09 13:04:13] 2026-01-09 17:23:23,857 | INFO     | . log creation = 0 s
[2026-01-09 13:04:13] 2026-01-09 17:23:23,857 | INFO     | ..............................
[2026-01-09 13:04:13] 2026-01-09 17:23:24,575 | INFO     | 
[2026-01-09 13:04:13] 2026-01-09 17:23:24,575 | INFO     | job summary report
[2026-01-09 13:04:13] 2026-01-09 17:23:24,575 | INFO     | --------------------------------------------------
[2026-01-09 13:04:13] 2026-01-09 17:23:24,576 | INFO     | PanDA job id: 6963152866
[2026-01-09 13:04:13] 2026-01-09 17:23:24,576 | INFO     | task id: 47898826
[2026-01-09 13:04:13] 2026-01-09 17:23:24,576 | INFO     | errors: (none)
[2026-01-09 13:04:13] 2026-01-09 17:23:24,576 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:04:13] 2026-01-09 17:23:24,576 | INFO     | pilot state: finished 
[2026-01-09 13:04:13] 2026-01-09 17:23:24,576 | INFO     | transexitcode: 0
[2026-01-09 13:04:13] 2026-01-09 17:23:24,576 | INFO     | exeerrorcode: 0
[2026-01-09 13:04:13] 2026-01-09 17:23:24,576 | INFO     | exeerrordiag: 
[2026-01-09 13:04:13] 2026-01-09 17:23:24,576 | INFO     | exitcode: 0
[2026-01-09 13:04:13] 2026-01-09 17:23:24,576 | INFO     | exitmsg: OK
[2026-01-09 13:04:13] 2026-01-09 17:23:24,576 | INFO     | cpuconsumptiontime: 69487 s
[2026-01-09 13:04:13] 2026-01-09 17:23:24,577 | INFO     | nevents: 400
[2026-01-09 13:04:13] 2026-01-09 17:23:24,577 | INFO     | neventsw: 0
[2026-01-09 13:04:13] 2026-01-09 17:23:24,577 | INFO     | pid: 2761617
[2026-01-09 13:04:13] 2026-01-09 17:23:24,577 | INFO     | pgrp: 2761617
[2026-01-09 13:04:13] 2026-01-09 17:23:24,577 | INFO     | corecount: 12
[2026-01-09 13:04:13] 2026-01-09 17:23:24,577 | INFO     | event service: False
[2026-01-09 13:04:13] 2026-01-09 17:23:24,577 | INFO     | sizes: {0: 2283142, 1: 2283743, 2: 2283855, 3: 2284054, 15: 2284054, 26: 2284082, 37: 2284238, 50: 2284528, 61: 2284556, 43738: 2327877, 43740: 2327876, 43753: 233
[2026-01-09 13:04:13] 2026-01-09 17:23:24,577 | INFO     | --------------------------------------------------
[2026-01-09 13:04:13] 2026-01-09 17:23:24,577 | INFO     | 
[2026-01-09 13:04:13] 2026-01-09 17:23:24,577 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 13:04:13] 2026-01-09 17:23:24,717 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,717 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,717 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,717 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,717 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,717 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,718 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,718 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,718 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,718 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,718 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,718 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,718 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,718 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,718 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,718 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,719 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,719 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:04:13] 2026-01-09 17:23:24,719 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,719 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:04:13] 2026-01-09 17:23:24,719 | INFO     | job 6963152866 has completed (purged errors)
[2026-01-09 13:04:13] 2026-01-09 17:23:24,719 | INFO     | overall cleanup function is called
[2026-01-09 13:04:13] 2026-01-09 17:23:25,744 | INFO     | --- collectZombieJob: --- 10, [2761617]
[2026-01-09 13:04:13] 2026-01-09 17:23:25,745 | INFO     | zombie collector waiting for pid 2761617
[2026-01-09 13:04:13] 2026-01-09 17:23:25,745 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:04:13] 2026-01-09 17:23:25,745 | INFO     | collected zombie processes
[2026-01-09 13:04:13] 2026-01-09 17:23:25,745 | INFO     | will attempt to kill all subprocesses of pid=2761617
[2026-01-09 13:04:13] 2026-01-09 17:23:26,194 | INFO     | process IDs to be killed: [2761617] (in reverse order)
[2026-01-09 13:04:13] 2026-01-09 17:23:26,265 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:04:13] 2026-01-09 17:23:26,266 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:04:13] 2026-01-09 17:23:26,278 | INFO     | did not find any defunct processes belonging to 2761617
[2026-01-09 13:04:13] 2026-01-09 17:23:26,289 | INFO     | did not find any defunct processes belonging to 2761617
[2026-01-09 13:04:13] 2026-01-09 17:23:26,289 | INFO     | ready for new job
[2026-01-09 13:04:13] 2026-01-09 17:23:26,289 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:04:13] 2026-01-09 17:23:26,297 | INFO     | ***************************************
[2026-01-09 13:04:13] 2026-01-09 17:23:26,297 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:04:13] 2026-01-09 17:23:26,297 | INFO     | ***************************************
[2026-01-09 13:04:13] 2026-01-09 17:23:26,297 | INFO     | 
[2026-01-09 13:04:13] 2026-01-09 17:23:26,324 | INFO     | architecture information:
[2026-01-09 13:04:13] 2026-01-09 17:23:26,342 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:04:13] 2026-01-09 17:23:26,452 | INFO     | cat /etc/os-release:
[2026-01-09 13:04:13] NAME="CentOS Linux"
[2026-01-09 13:04:13] VERSION="7 (Core)"
[2026-01-09 13:04:13] ID="centos"
[2026-01-09 13:04:13] ID_LIKE="rhel fedora"
[2026-01-09 13:04:13] VERSION_ID="7"
[2026-01-09 13:04:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:04:13] ANSI_COLOR="0;31"
[2026-01-09 13:04:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:04:13] HOME_URL="https://www.centos.org/"
[2026-01-09 13:04:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:04:13] 
[2026-01-09 13:04:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:04:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:04:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:04:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:04:13] 
[2026-01-09 13:04:13] 2026-01-09 17:23:26,452 | INFO     | ***************************************
[2026-01-09 13:04:13] 2026-01-09 17:23:26,956 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 13:04:13] 2026-01-09 17:23:27,002 | INFO     | sufficient remaining disk space (52203356160 B)
[2026-01-09 13:04:13] 2026-01-09 17:23:27,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:04:13] 2026-01-09 17:23:27,002 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:04:13] 2026-01-09 17:23:27,003 | INFO     | update_server=False
[2026-01-09 13:04:13] 2026-01-09 17:23:27,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:04:13] 2026-01-09 17:23:27,003 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:04:13] 2026-01-09 17:23:27,003 | INFO     | aborting loop
[2026-01-09 13:04:13] 2026-01-09 17:23:27,299 | INFO     | all data control threads have been joined
[2026-01-09 13:04:13] 2026-01-09 17:23:27,483 | INFO     | all job control threads have been joined
[2026-01-09 13:04:13] 2026-01-09 17:23:27,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:04:13] 2026-01-09 17:23:27,985 | INFO     | all payload control threads have been joined
[2026-01-09 13:04:13] 2026-01-09 17:23:28,011 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:04:13] 2026-01-09 17:23:28,011 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:04:13] 2026-01-09 17:23:28,012 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:04:13] 2026-01-09 17:23:28,144 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:04:13] 2026-01-09 17:23:28,306 | INFO     | [data] control thread has finished
[2026-01-09 13:04:13] 2026-01-09 17:23:28,482 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:04:13] 2026-01-09 17:23:28,490 | INFO     | [job] control thread has finished
[2026-01-09 13:04:13] 2026-01-09 17:23:28,981 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:04:13] 2026-01-09 17:23:28,981 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:04:13] 2026-01-09 17:23:28,993 | INFO     | [payload] control thread has finished
[2026-01-09 13:04:13] 2026-01-09 17:23:29,283 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:04:13] 2026-01-09 17:23:29,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:04:13] 2026-01-09 17:23:29,356 | INFO     | [job] validate thread has finished
[2026-01-09 13:04:13] 2026-01-09 17:23:29,356 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:04:13] 2026-01-09 17:23:29,476 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:04:13] 2026-01-09 17:23:29,840 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:04:13] 2026-01-09 17:23:30,484 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:04:13] 2026-01-09 17:23:33,364 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:04:13] 2026-01-09 17:23:56,297 | INFO     | PID=2744236 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 13:04:13] 2026-01-09 17:23:56,297 | INFO     | .. there are 8 such processes running
[2026-01-09 13:04:13] 2026-01-09 17:23:56,298 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:04:13] 2026-01-09 17:23:56,298 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:04:13] 2026-01-09 17:23:56,298 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:04:13] 2026-01-09 17:24:06,368 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:04:13] 2026-01-09 17:24:08,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139691174504256)>', '<ExcThread(monitor, started 139690816546560)>']
[2026-01-09 13:04:13] 2026-01-09 17:24:08,469 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:04:13] 2026-01-09 17:24:08,470 | INFO     | [monitor] control thread has ended
[2026-01-09 13:04:13] 2026-01-09 17:24:13,229 | INFO     | all workflow threads have been joined
[2026-01-09 13:04:13] 2026-01-09 17:24:13,230 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:04:13] 2026-01-09 17:24:13,230 | INFO     | traces error code: 0
[2026-01-09 13:04:13] 2026-01-09 17:24:13,230 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:04:13] 2026-01-09 17:24:15,275 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:04:13] 2026-01-09 17:24:15,323 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:04:13] 2026-01-09 17:24:15,468 [wrapper] pilotpid: 2744236
[2026-01-09 13:04:13] 2026-01-09 17:24:15,532 [wrapper] Pilot exit status: 0
[2026-01-09 13:04:13] 2026-01-09 17:24:15,772 [wrapper] pandaids: 6963152866
[2026-01-09 13:04:13] 2026-01-09 17:24:16,481 [wrapper] cleanup supervisor_pilot 3891890 2744237
[2026-01-09 13:04:13] 2026-01-09 17:24:16,526 [wrapper] Test setup, not cleaning
[2026-01-09 13:04:13] 2026-01-09 17:24:16,595 [wrapper] apfmon messages muted
[2026-01-09 13:04:13] 2026-01-09 17:24:16,644 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:04:13] 2026-01-09 17:24:16,696 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:04:13]  *** Error codes and diagnostics ***
[2026-01-09 13:04:13]     "exeErrorCode": 0,
[2026-01-09 13:04:13]     "exeErrorDiag": "",
[2026-01-09 13:04:13]     "pilotErrorCode": 0,
[2026-01-09 13:04:13]     "pilotErrorDiag": "",
[2026-01-09 13:04:13]  *** Listing of results directory ***
[2026-01-09 13:04:13] total 450344
[2026-01-09 13:04:13] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 13:04:13] -rwx------. 1 boincer umatlas     36322 Jan  8 11:06 runpilot2-wrapper.sh
[2026-01-09 13:04:13] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 13:04:13] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:04:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:09 run_atlas
[2026-01-09 13:04:13] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:09 job.xml
[2026-01-09 13:04:13] -rw-r--r--. 2 boincer umatlas 227323936 Jan  9 00:09 EVNT.47898824._001143.pool.root.1
[2026-01-09 13:04:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:09 start_atlas.sh
[2026-01-09 13:04:13] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:09 shared
[2026-01-09 13:04:13] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 00:09 input.tar.gz
[2026-01-09 13:04:13] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:09 boinc_lockfile
[2026-01-09 13:04:13] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 00:09 pandaJob.out
[2026-01-09 13:04:13] -rw-------. 1 boincer umatlas        57 Jan  9 00:09 setup.sh.local
[2026-01-09 13:04:13] -rw-------. 1 boincer umatlas    989771 Jan  9 00:11 agis_schedconf.cvmfs.json
[2026-01-09 13:04:13] drwx------. 5 boincer umatlas      4096 Jan  9 00:11 pilot3
[2026-01-09 13:04:13] -rw-------. 1 boincer umatlas 217700613 Jan  9 12:18 HITS.47898826._029568.pool.root.1
[2026-01-09 13:04:13] -rw-r--r--. 1 boincer umatlas       531 Jan  9 12:18 boinc_task_state.xml
[2026-01-09 13:04:13] -rw-------. 1 boincer umatlas      1040 Jan  9 12:22 memory_monitor_summary.json
[2026-01-09 13:04:13] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:22 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:04:13] -rw-------. 1 boincer umatlas    886547 Jan  9 12:22 log.47898826._029568.job.log.tgz.1
[2026-01-09 13:04:13] -rw-------. 1 boincer umatlas      7821 Jan  9 12:23 heartbeat.json
[2026-01-09 13:04:13] -rw-------. 1 boincer umatlas        95 Jan  9 12:23 pilot_heartbeat.json
[2026-01-09 13:04:13] -rw-------. 1 boincer umatlas      4823 Jan  9 12:24 pilotlog.txt
[2026-01-09 13:04:13] -rw-------. 1 boincer umatlas   5214419 Jan  9 12:24 log.47898826._029568.job.log.1
[2026-01-09 13:04:13] -rw-------. 1 boincer umatlas       357 Jan  9 12:24 output.list
[2026-01-09 13:04:13] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:24 runtime_log
[2026-01-09 13:04:13] -rw-------. 1 boincer umatlas   6123520 Jan  9 12:24 result.tar.gz
[2026-01-09 13:04:13] -rw-r--r--. 1 boincer umatlas      9340 Jan  9 12:24 runtime_log.err
[2026-01-09 13:04:13] -rw-------. 1 boincer umatlas       657 Jan  9 12:24 hLtLDmPi7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDml6kKDmsWV4Em.diag
[2026-01-09 13:04:13] -rw-r--r--. 1 boincer umatlas      6660 Jan  9 13:04 init_data.xml
[2026-01-09 13:04:13] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 13:04 boinc_mmap_file
[2026-01-09 13:04:13] -rw-r--r--. 1 boincer umatlas        28 Jan  9 13:04 wrapper_checkpoint.txt
[2026-01-09 13:04:13] -rw-r--r--. 1 boincer umatlas     21262 Jan  9 13:04 stderr.txt
[2026-01-09 13:04:13] HITS file was successfully produced:
[2026-01-09 13:04:13] -rw-------. 1 boincer umatlas 217700613 Jan  9 12:18 shared/HITS.pool.root.1
[2026-01-09 13:04:13]  *** Contents of shared directory: ***
[2026-01-09 13:04:13] total 441184
[2026-01-09 13:04:13] -rw-r--r--. 2 boincer umatlas 227323936 Jan  9 00:09 ATLAS.root_0
[2026-01-09 13:04:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:09 start_atlas.sh
[2026-01-09 13:04:13] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 00:09 input.tar.gz
[2026-01-09 13:04:13] -rw-------. 1 boincer umatlas 217700613 Jan  9 12:18 HITS.pool.root.1
[2026-01-09 13:04:13] -rw-------. 1 boincer umatlas   6123520 Jan  9 12:24 result.tar.gz
13:04:15 (2735045): run_atlas exited; CPU time 70346.811593
13:04:15 (2735045): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN