Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:44:26 (6806): wrapper (7.7.26015): starting
08:44:26 (6806): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 08:44:26] Arguments: --nthreads 8
[2026-01-09 08:44:26] Threads: 8
[2026-01-09 08:44:26] Checking for CVMFS
[2026-01-09 08:44:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:44:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:44:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:44:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:44:26] 2.11.2.0 10325 35130 95772 154936 0 57 15836266 25165825 0 130560 0 14910781 99.830 9685520 3938 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 08:44:26] CVMFS is ok
[2026-01-09 08:44:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:44:26] Checking for apptainer binary...
[2026-01-09 08:44:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:44:26] Running /usr/bin/apptainer --version
[2026-01-09 08:44:26] apptainer version 1.3.2-1.el7
[2026-01-09 08:44:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:44:28] cg-vwn405.simple-grid.lan
[2026-01-09 08:44:28] apptainer works
[2026-01-09 08:44:28] Set ATHENA_PROC_NUMBER=8
[2026-01-09 08:44:28] Set ATHENA_CORE_NUMBER=8
[2026-01-09 08:44:28] Starting ATLAS job with PandaID=6963152514
[2026-01-09 08:44:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 11:34:05]  *** The last 200 lines of the pilot log: ***
[2026-01-09 11:34:05] 2026-01-09 10:33:00,887 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 11:34:05] 2026-01-09 10:33:02,050 | INFO     | time since job start (10099s) is within the limit (349056.0s)
[2026-01-09 11:34:05] 2026-01-09 10:33:02,369 | WARNING  | process 17021 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 11:34:05] 2026-01-09 10:33:02,370 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6963152514/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:34:05] 2026-01-09 10:33:02,431 | INFO     | number of running child processes to parent process 17021: 1
[2026-01-09 11:34:05] 2026-01-09 10:33:02,431 | INFO     | maximum number of monitored processes: 6
[2026-01-09 11:34:05] 2026-01-09 10:33:04,056 | INFO     | time since job start (10101s) is within the limit (349056.0s)
[2026-01-09 11:34:05] 2026-01-09 10:33:04,935 | INFO     | monitor loop #688: job 0:6963152514 is in state 'finished'
[2026-01-09 11:34:05] 2026-01-09 10:33:04,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:34:05] 2026-01-09 10:33:05,251 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 11:34:05] 2026-01-09 10:33:05,252 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 11:34:05] 2026-01-09 10:33:05,254 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6963152514/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:34:05] 2026-01-09 10:33:05,255 | INFO     | extracted standard info from prmon json
[2026-01-09 11:34:05] 2026-01-09 10:33:05,255 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 11:34:05] 2026-01-09 10:33:05,255 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:34:05] 2026-01-09 10:33:05,255 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 11:34:05] 2026-01-09 10:33:05,255 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:34:05] 2026-01-09 10:33:05,259 | INFO     | fitting pss+swap vs Time
[2026-01-09 11:34:05] 2026-01-09 10:33:05,260 | INFO     | sum of square deviations: 1392881930.0
[2026-01-09 11:34:05] 2026-01-09 10:33:05,261 | INFO     | sum of deviations: 4915860130.999993
[2026-01-09 11:34:05] 2026-01-09 10:33:05,261 | INFO     | mean x: 1767949715.0
[2026-01-09 11:34:05] 2026-01-09 10:33:05,261 | INFO     | mean y: 2515133.83030303
[2026-01-09 11:34:05] 2026-01-09 10:33:05,262 | INFO     | intersect: -6237061480.952331
[2026-01-09 11:34:05] 2026-01-09 10:33:05,262 | INFO     | chi2: 1.6444670160938037
[2026-01-09 11:34:05] 2026-01-09 10:33:05,263 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 11:34:05] 2026-01-09 10:33:05,264 | INFO     | sum of deviations: 4857172305.5
[2026-01-09 11:34:05] 2026-01-09 10:33:05,264 | INFO     | mean x: 1767949562.5
[2026-01-09 11:34:05] 2026-01-09 10:33:05,264 | INFO     | mean y: 2515060.96875
[2026-01-09 11:34:05] 2026-01-09 10:33:05,264 | INFO     | intersect: -6758812463.941686
[2026-01-09 11:34:05] 2026-01-09 10:33:05,264 | INFO     | chi2: 1.6454431637218054
[2026-01-09 11:34:05] 2026-01-09 10:33:05,265 | INFO     | current chi2=1.6454431637218054 (change=-0.05935951396096639 %)
[2026-01-09 11:34:05] 2026-01-09 10:33:05,265 | INFO     | right removable region: 159
[2026-01-09 11:34:05] 2026-01-09 10:33:05,265 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 11:34:05] 2026-01-09 10:33:05,266 | INFO     | sum of deviations: -20178547063.5
[2026-01-09 11:34:05] 2026-01-09 10:33:05,266 | INFO     | mean x: 1767949867.5
[2026-01-09 11:34:05] 2026-01-09 10:33:05,267 | INFO     | mean y: 2545852.78125
[2026-01-09 11:34:05] 2026-01-09 10:33:05,267 | INFO     | intersect: 28091685094.494446
[2026-01-09 11:34:05] 2026-01-09 10:33:05,267 | INFO     | chi2: 0.158972259086032
[2026-01-09 11:34:05] 2026-01-09 10:33:05,267 | INFO     | current chi2=0.158972259086032 (change=90.33290071918573 %)
[2026-01-09 11:34:05] 2026-01-09 10:33:05,267 | INFO     | sum of square deviations: 1154663510.0
[2026-01-09 11:34:05] 2026-01-09 10:33:05,269 | INFO     | sum of deviations: -20507157997.999996
[2026-01-09 11:34:05] 2026-01-09 10:33:05,269 | INFO     | mean x: 1767950020.0
[2026-01-09 11:34:05] 2026-01-09 10:33:05,269 | INFO     | mean y: 2546217.1032258063
[2026-01-09 11:34:05] 2026-01-09 10:33:05,269 | INFO     | intersect: 31401850065.11974
[2026-01-09 11:34:05] 2026-01-09 10:33:05,269 | INFO     | chi2: 0.1377410708078633
[2026-01-09 11:34:05] 2026-01-09 10:33:05,269 | INFO     | current chi2=0.1377410708078633 (change=13.355278713551453 %)
[2026-01-09 11:34:05] 2026-01-09 10:33:05,270 | INFO     | left removable region: 20
[2026-01-09 11:34:05] 2026-01-09 10:33:05,270 | INFO     | sum of square deviations: 832722590.0
[2026-01-09 11:34:05] 2026-01-09 10:33:05,271 | INFO     | sum of deviations: -10436692276.000004
[2026-01-09 11:34:05] 2026-01-09 10:33:05,271 | INFO     | mean x: 1767950142.0
[2026-01-09 11:34:05] 2026-01-09 10:33:05,271 | INFO     | mean y: 2532667.870503597
[2026-01-09 11:34:05] 2026-01-09 10:33:05,271 | INFO     | intersect: 22160634072.76275
[2026-01-09 11:34:05] 2026-01-09 10:33:05,271 | INFO     | chi2: 0.10633767626431444
[2026-01-09 11:34:05] 2026-01-09 10:33:05,272 | INFO     | current memory leak: -12.53 B/s (using 139 data points, chi2=0.11)
[2026-01-09 11:34:05] 2026-01-09 10:33:05,272 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 11:34:05] 2026-01-09 10:33:05,272 | INFO     | ..............................
[2026-01-09 11:34:05] 2026-01-09 10:33:05,273 | INFO     | . Timing measurements:
[2026-01-09 11:34:05] 2026-01-09 10:33:05,273 | INFO     | . get job = 0 s
[2026-01-09 11:34:05] 2026-01-09 10:33:05,273 | INFO     | . initial setup = 1 s
[2026-01-09 11:34:05] 2026-01-09 10:33:05,273 | INFO     | . payload setup = 6 s
[2026-01-09 11:34:05] 2026-01-09 10:33:05,273 | INFO     | . stage-in = 0 s
[2026-01-09 11:34:05] 2026-01-09 10:33:05,273 | INFO     | . payload execution = 10067 s
[2026-01-09 11:34:05] 2026-01-09 10:33:05,273 | INFO     | . stage-out = 1 s
[2026-01-09 11:34:05] 2026-01-09 10:33:05,273 | INFO     | . log creation = 0 s
[2026-01-09 11:34:05] 2026-01-09 10:33:05,273 | INFO     | ..............................
[2026-01-09 11:34:05] 2026-01-09 10:33:05,796 | INFO     | 
[2026-01-09 11:34:05] 2026-01-09 10:33:05,797 | INFO     | job summary report
[2026-01-09 11:34:05] 2026-01-09 10:33:05,797 | INFO     | --------------------------------------------------
[2026-01-09 11:34:05] 2026-01-09 10:33:05,797 | INFO     | PanDA job id: 6963152514
[2026-01-09 11:34:05] 2026-01-09 10:33:05,797 | INFO     | task id: 47898826
[2026-01-09 11:34:05] 2026-01-09 10:33:05,797 | INFO     | errors: (none)
[2026-01-09 11:34:05] 2026-01-09 10:33:05,797 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 11:34:05] 2026-01-09 10:33:05,797 | INFO     | pilot state: finished 
[2026-01-09 11:34:05] 2026-01-09 10:33:05,797 | INFO     | transexitcode: 0
[2026-01-09 11:34:05] 2026-01-09 10:33:05,798 | INFO     | exeerrorcode: 0
[2026-01-09 11:34:05] 2026-01-09 10:33:05,798 | INFO     | exeerrordiag: 
[2026-01-09 11:34:05] 2026-01-09 10:33:05,798 | INFO     | exitcode: 0
[2026-01-09 11:34:05] 2026-01-09 10:33:05,798 | INFO     | exitmsg: OK
[2026-01-09 11:34:05] 2026-01-09 10:33:05,798 | INFO     | cpuconsumptiontime: 75933 s
[2026-01-09 11:34:05] 2026-01-09 10:33:05,798 | INFO     | nevents: 400
[2026-01-09 11:34:05] 2026-01-09 10:33:05,798 | INFO     | neventsw: 0
[2026-01-09 11:34:05] 2026-01-09 10:33:05,798 | INFO     | pid: 17021
[2026-01-09 11:34:05] 2026-01-09 10:33:05,798 | INFO     | pgrp: 17021
[2026-01-09 11:34:05] 2026-01-09 10:33:05,798 | INFO     | corecount: 8
[2026-01-09 11:34:05] 2026-01-09 10:33:05,799 | INFO     | event service: False
[2026-01-09 11:34:05] 2026-01-09 10:33:05,799 | INFO     | sizes: {0: 2283797, 1: 2283996, 5: 2284258, 11: 2284314, 10078: 2312856, 10080: 2322038, 10086: 2322240}
[2026-01-09 11:34:05] 2026-01-09 10:33:05,799 | INFO     | --------------------------------------------------
[2026-01-09 11:34:05] 2026-01-09 10:33:05,799 | INFO     | 
[2026-01-09 11:34:05] 2026-01-09 10:33:05,799 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-09 11:34:05] 2026-01-09 10:33:05,825 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,826 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,826 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,826 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,826 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,826 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,826 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,827 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,827 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,827 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,827 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,827 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,827 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,827 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,827 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,828 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,828 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,828 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 11:34:05] 2026-01-09 10:33:05,828 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,828 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 11:34:05] 2026-01-09 10:33:05,828 | INFO     | job 6963152514 has completed (purged errors)
[2026-01-09 11:34:05] 2026-01-09 10:33:05,828 | INFO     | overall cleanup function is called
[2026-01-09 11:34:05] 2026-01-09 10:33:06,837 | INFO     | --- collectZombieJob: --- 10, [17021]
[2026-01-09 11:34:05] 2026-01-09 10:33:06,837 | INFO     | zombie collector waiting for pid 17021
[2026-01-09 11:34:05] 2026-01-09 10:33:06,837 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 11:34:05] 2026-01-09 10:33:06,838 | INFO     | collected zombie processes
[2026-01-09 11:34:05] 2026-01-09 10:33:06,838 | INFO     | will attempt to kill all subprocesses of pid=17021
[2026-01-09 11:34:05] 2026-01-09 10:33:06,898 | INFO     | process IDs to be killed: [17021] (in reverse order)
[2026-01-09 11:34:05] 2026-01-09 10:33:06,943 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 11:34:05] 2026-01-09 10:33:06,944 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 11:34:05] 2026-01-09 10:33:06,945 | INFO     | did not find any defunct processes belonging to 17021
[2026-01-09 11:34:05] 2026-01-09 10:33:06,947 | INFO     | did not find any defunct processes belonging to 17021
[2026-01-09 11:34:05] 2026-01-09 10:33:06,947 | INFO     | ready for new job
[2026-01-09 11:34:05] 2026-01-09 10:33:06,947 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 11:34:05] 2026-01-09 10:33:06,949 | INFO     | ***************************************
[2026-01-09 11:34:05] 2026-01-09 10:33:06,949 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 11:34:05] 2026-01-09 10:33:06,949 | INFO     | ***************************************
[2026-01-09 11:34:05] 2026-01-09 10:33:06,949 | INFO     | 
[2026-01-09 11:34:05] 2026-01-09 10:33:06,950 | INFO     | pilot is running in a VM
[2026-01-09 11:34:05] 2026-01-09 10:33:06,950 | INFO     | architecture information:
[2026-01-09 11:34:05] 2026-01-09 10:33:06,950 | INFO     | executing command: cat /etc/os-release
[2026-01-09 11:34:05] 2026-01-09 10:33:06,967 | INFO     | cat /etc/os-release:
[2026-01-09 11:34:05] NAME="CentOS Linux"
[2026-01-09 11:34:05] VERSION="7 (Core)"
[2026-01-09 11:34:05] ID="centos"
[2026-01-09 11:34:05] ID_LIKE="rhel fedora"
[2026-01-09 11:34:05] VERSION_ID="7"
[2026-01-09 11:34:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 11:34:05] ANSI_COLOR="0;31"
[2026-01-09 11:34:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 11:34:05] HOME_URL="https://www.centos.org/"
[2026-01-09 11:34:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 11:34:05] 
[2026-01-09 11:34:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 11:34:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 11:34:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 11:34:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 11:34:05] 
[2026-01-09 11:34:05] 2026-01-09 10:33:06,968 | INFO     | ***************************************
[2026-01-09 11:34:05] 2026-01-09 10:33:07,470 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-09 11:34:05] 2026-01-09 10:33:07,490 | INFO     | sufficient remaining disk space (498129174528 B)
[2026-01-09 11:34:05] 2026-01-09 10:33:07,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 11:34:05] 2026-01-09 10:33:07,490 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 11:34:05] 2026-01-09 10:33:07,490 | INFO     | update_server=False
[2026-01-09 11:34:05] 2026-01-09 10:33:07,490 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 11:34:05] 2026-01-09 10:33:07,831 | INFO     | all data control threads have been joined
[2026-01-09 11:34:05] 2026-01-09 10:33:07,969 | INFO     | all payload control threads have been joined
[2026-01-09 11:34:05] 2026-01-09 10:33:07,999 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 11:34:05] 2026-01-09 10:33:08,443 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:34:05] 2026-01-09 10:33:08,444 | INFO     | aborting loop
[2026-01-09 11:34:05] 2026-01-09 10:33:08,496 | INFO     | [job] retrieve thread has finished
[2026-01-09 11:34:05] 2026-01-09 10:33:08,521 | INFO     | [payload] validate_post thread has finished
[2026-01-09 11:34:05] 2026-01-09 10:33:08,648 | INFO     | all job control threads have been joined
[2026-01-09 11:34:05] 2026-01-09 10:33:08,837 | INFO     | [data] control thread has finished
[2026-01-09 11:34:05] 2026-01-09 10:33:08,912 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 11:34:05] 2026-01-09 10:33:08,913 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 11:34:05] 2026-01-09 10:33:08,975 | INFO     | [payload] control thread has finished
[2026-01-09 11:34:05] 2026-01-09 10:33:09,048 | INFO     | [data] copytool_in thread has finished
[2026-01-09 11:34:05] 2026-01-09 10:33:09,206 | INFO     | [payload] failed_post thread has finished
[2026-01-09 11:34:05] 2026-01-09 10:33:09,337 | INFO     | [job] validate thread has finished
[2026-01-09 11:34:05] 2026-01-09 10:33:09,449 | INFO     | [job] job monitor thread has finished
[2026-01-09 11:34:05] 2026-01-09 10:33:09,512 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 11:34:05] 2026-01-09 10:33:09,653 | INFO     | [job] control thread has finished
[2026-01-09 11:34:05] 2026-01-09 10:33:09,832 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 11:34:05] 2026-01-09 10:33:10,005 | INFO     | [data] copytool_out thread has finished
[2026-01-09 11:34:05] 2026-01-09 10:33:10,400 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:34:05] 2026-01-09 10:33:10,609 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 11:34:05] 2026-01-09 10:33:11,406 | INFO     | [job] queue monitor thread has finished
[2026-01-09 11:34:05] 2026-01-09 10:33:14,615 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 11:34:05] 2026-01-09 10:33:37,144 | INFO     | PID=10583 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 11:34:05] 2026-01-09 10:33:37,144 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 11:34:05] 2026-01-09 10:33:37,144 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 11:34:05] 2026-01-09 10:33:37,144 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 11:34:05] 2026-01-09 10:33:59,835 | INFO     | [monitor] cgroup control has ended
[2026-01-09 11:34:05] 2026-01-09 10:33:59,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140150687819584)>', '<ExcThread(monitor, started 140149740529408)>']
[2026-01-09 11:34:05] 2026-01-09 10:34:00,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 11:34:05] 2026-01-09 10:34:00,262 | INFO     | [monitor] control thread has ended
[2026-01-09 11:34:05] 2026-01-09 10:34:04,897 | INFO     | all workflow threads have been joined
[2026-01-09 11:34:05] 2026-01-09 10:34:04,897 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 11:34:05] 2026-01-09 10:34:04,898 | INFO     | traces error code: 0
[2026-01-09 11:34:05] 2026-01-09 10:34:04,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 11:34:05] 2026-01-09 10:34:05,044 [wrapper] ==== pilot stdout END ====
[2026-01-09 11:34:05] 2026-01-09 10:34:05,049 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 11:34:05] 2026-01-09 10:34:05,052 [wrapper] pilotpid: 10583
[2026-01-09 11:34:05] 2026-01-09 10:34:05,059 [wrapper] Pilot exit status: 0
[2026-01-09 11:34:05] 2026-01-09 10:34:05,075 [wrapper] pandaids: 6963152514
[2026-01-09 11:34:05] 2026-01-09 10:34:05,111 [wrapper] cleanup supervisor_pilot  3519 10584
[2026-01-09 11:34:05] 2026-01-09 10:34:05,116 [wrapper] Test setup, not cleaning
[2026-01-09 11:34:05] 2026-01-09 10:34:05,121 [wrapper] apfmon messages muted
[2026-01-09 11:34:05] 2026-01-09 10:34:05,125 [wrapper] ==== wrapper stdout END ====
[2026-01-09 11:34:05] 2026-01-09 10:34:05,128 [wrapper] ==== wrapper stderr END ====
[2026-01-09 11:34:05]  *** Error codes and diagnostics ***
[2026-01-09 11:34:05]     "exeErrorCode": 0,
[2026-01-09 11:34:05]     "exeErrorDiag": "",
[2026-01-09 11:34:05]     "pilotErrorCode": 0,
[2026-01-09 11:34:05]     "pilotErrorDiag": "",
[2026-01-09 11:34:05]  *** Listing of results directory ***
[2026-01-09 11:34:05] total 445852
[2026-01-09 11:34:05] -rw-r--r--. 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-09 11:34:05] -rwx------. 1 boinc boinc     36322 Jan  8 17:06 runpilot2-wrapper.sh
[2026-01-09 11:34:05] -rw-r--r--. 1 boinc boinc      5112 Jan  8 17:09 queuedata.json
[2026-01-09 11:34:05] -rw-r--r--. 1 boinc boinc       100 Jan  9 08:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 11:34:05] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 08:44 run_atlas
[2026-01-09 11:34:05] -rw-r--r--. 1 boinc boinc       105 Jan  9 08:44 job.xml
[2026-01-09 11:34:05] -rw-r--r--. 1 boinc boinc      6391 Jan  9 08:44 init_data.xml
[2026-01-09 11:34:05] -rw-r--r--. 2 boinc boinc 226744060 Jan  9 08:44 EVNT.47898824._000871.pool.root.1
[2026-01-09 11:34:05] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:44 start_atlas.sh
[2026-01-09 11:34:05] drwxrwx--x. 2 boinc boinc        68 Jan  9 08:44 shared
[2026-01-09 11:34:05] -rw-r--r--. 2 boinc boinc    592395 Jan  9 08:44 input.tar.gz
[2026-01-09 11:34:05] -rw-r--r--. 1 boinc boinc         0 Jan  9 08:44 boinc_lockfile
[2026-01-09 11:34:05] -rw-r--r--. 1 boinc boinc      2518 Jan  9 08:44 pandaJob.out
[2026-01-09 11:34:05] -rw-------. 1 boinc boinc    989771 Jan  9 08:44 agis_schedconf.cvmfs.json
[2026-01-09 11:34:05] -rw-------. 1 boinc boinc   1516240 Jan  9 08:44 agis_ddmendpoints.agis.ALL.json
[2026-01-09 11:34:05] drwx------. 5 boinc boinc      4096 Jan  9 08:44 pilot3
[2026-01-09 11:34:05] -rw-------. 1 boinc boinc 222367339 Jan  9 11:32 HITS.47898826._029272.pool.root.1
[2026-01-09 11:34:05] -rw-r--r--. 1 boinc boinc       530 Jan  9 11:32 boinc_task_state.xml
[2026-01-09 11:34:05] -rw-------. 1 boinc boinc        95 Jan  9 11:32 pilot_heartbeat.json
[2026-01-09 11:34:05] -rw-------. 1 boinc boinc      1016 Jan  9 11:32 memory_monitor_summary.json
[2026-01-09 11:34:05] -rw-------. 1 boinc boinc    412837 Jan  9 11:32 log.47898826._029272.job.log.tgz.1
[2026-01-09 11:34:05] -rw-------. 1 boinc boinc      7787 Jan  9 11:33 heartbeat.json
[2026-01-09 11:34:05] -rw-r--r--. 1 boinc boinc        28 Jan  9 11:33 wrapper_checkpoint.txt
[2026-01-09 11:34:05] -rw-r--r--. 1 boinc boinc      8192 Jan  9 11:33 boinc_mmap_file
[2026-01-09 11:34:05] -rw-------. 1 boinc boinc      4809 Jan  9 11:34 pilotlog.txt
[2026-01-09 11:34:05] -rw-------. 1 boinc boinc   1356098 Jan  9 11:34 log.47898826._029272.job.log.1
[2026-01-09 11:34:05] -rw-------. 1 boinc boinc       357 Jan  9 11:34 output.list
[2026-01-09 11:34:05] -rw-r--r--. 1 boinc boinc       620 Jan  9 11:34 runtime_log
[2026-01-09 11:34:05] -rw-------. 1 boinc boinc   1792000 Jan  9 11:34 result.tar.gz
[2026-01-09 11:34:05] -rw-r--r--. 1 boinc boinc      8817 Jan  9 11:34 runtime_log.err
[2026-01-09 11:34:05] -rw-------. 1 boinc boinc       655 Jan  9 11:34 kcDNDmCi7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmi4kKDmSHVtsn.diag
[2026-01-09 11:34:05] -rw-r--r--. 1 boinc boinc     21065 Jan  9 11:34 stderr.txt
[2026-01-09 11:34:05] HITS file was successfully produced:
[2026-01-09 11:34:05] -rw-------. 1 boinc boinc 222367339 Jan  9 11:32 shared/HITS.pool.root.1
[2026-01-09 11:34:05]  *** Contents of shared directory: ***
[2026-01-09 11:34:05] total 440936
[2026-01-09 11:34:05] -rw-r--r--. 2 boinc boinc 226744060 Jan  9 08:44 ATLAS.root_0
[2026-01-09 11:34:05] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:44 start_atlas.sh
[2026-01-09 11:34:05] -rw-r--r--. 2 boinc boinc    592395 Jan  9 08:44 input.tar.gz
[2026-01-09 11:34:05] -rw-------. 1 boinc boinc 222367339 Jan  9 11:32 HITS.pool.root.1
[2026-01-09 11:34:05] -rw-------. 1 boinc boinc   1792000 Jan  9 11:34 result.tar.gz
11:34:07 (6806): run_atlas exited; CPU time 76000.583625
11:34:07 (6806): called boinc_finish(0)

</stderr_txt>
]]>

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