Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:41:00 (3586027): wrapper (7.7.26015): starting
03:41:00 (3586027): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 03:41:00] Arguments: --nthreads 8
[2026-01-09 03:41:00] Threads: 8
[2026-01-09 03:41:00] Checking for CVMFS
[2026-01-09 03:41:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 03:41:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 03:41:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 03:41:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 03:41:00] 2.13.3.0 12275 93180 363772 154937 2 295 28979175 40960001 9895 16776704 25 434155892 99.626 430248511 37150 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 03:41:00] CVMFS is ok
[2026-01-09 03:41:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 03:41:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 03:41:01] Further information can be found at the LHC@home message board.
[2026-01-09 03:41:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 03:41:01] Checking for apptainer binary...
[2026-01-09 03:41:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 03:41:01] Running /usr/bin/apptainer --version
[2026-01-09 03:41:01] apptainer version 1.4.5-2.el9
[2026-01-09 03:41:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 03:41:01] c7-11-11.aglt2.org
[2026-01-09 03:41:01] apptainer works
[2026-01-09 03:41:01] Set ATHENA_PROC_NUMBER=8
[2026-01-09 03:41:01] Set ATHENA_CORE_NUMBER=8
[2026-01-09 03:41:01] Starting ATLAS job with PandaID=6963077760
[2026-01-09 03:41:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:20:06 (3586027): BOINC client no longer exists - exiting
10:20:06 (3586027): timer handler: client dead, exiting
10:28:55 (1116641): wrapper (7.7.26015): starting
10:28:55 (1116641): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 10:28:55] Arguments: --nthreads 9
[2026-01-09 10:28:55] Threads: 9
[2026-01-09 10:28:55] This job has been restarted, cleaning up previous attempt
[2026-01-09 10:28:55] Checking for CVMFS
[2026-01-09 10:28:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:28:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:28:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:28:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:28:55] 2.13.3.0 12275 93588 361216 154948 3 140 31602799 40960000 13738 16776704 25 435713751 99.627 430708223 37156 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 10:28:55] CVMFS is ok
[2026-01-09 10:28:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:28:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:28:55] Further information can be found at the LHC@home message board.
[2026-01-09 10:28:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:28:55] Checking for apptainer binary...
[2026-01-09 10:28:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:28:55] Running /usr/bin/apptainer --version
[2026-01-09 10:28:55] apptainer version 1.4.5-2.el9
[2026-01-09 10:28:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:28:55] c7-11-11.aglt2.org
[2026-01-09 10:28:55] apptainer works
[2026-01-09 10:28:55] Set ATHENA_PROC_NUMBER=9
[2026-01-09 10:28:55] Set ATHENA_CORE_NUMBER=9
[2026-01-09 10:28:55] Starting ATLAS job with PandaID=6963077760
[2026-01-09 10:28:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 03:41:04]  *** The last 200 lines of the pilot log: ***
[2026-01-10 03:41:04] 2026-01-10 08:40:12,397 | INFO     | time since job start (61863s) is within the limit (174528.0s)
[2026-01-10 03:41:04] 2026-01-10 08:40:13,555 | INFO     | monitor loop #4065: job 0:6963077760 is in state 'finished'
[2026-01-10 03:41:04] 2026-01-10 08:40:13,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 03:41:04] 2026-01-10 08:40:14,404 | INFO     | time since job start (61865s) is within the limit (174528.0s)
[2026-01-10 03:41:04] 2026-01-10 08:40:16,085 | INFO     | monitor loop #4066: job 0:6963077760 is in state 'finished'
[2026-01-10 03:41:04] 2026-01-10 08:40:16,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 03:41:04] 2026-01-10 08:40:16,411 | INFO     | time since job start (61867s) is within the limit (174528.0s)
[2026-01-10 03:41:04] 2026-01-10 08:40:18,418 | INFO     | time since job start (61869s) is within the limit (174528.0s)
[2026-01-10 03:41:04] 2026-01-10 08:40:18,590 | INFO     | monitor loop #4067: job 0:6963077760 is in state 'finished'
[2026-01-10 03:41:04] 2026-01-10 08:40:18,592 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 03:41:04] 2026-01-10 08:40:18,748 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 03:41:04] 2026-01-10 08:40:18,761 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3290.995390625
[2026-01-10 03:41:04] 2026-01-10 08:40:18,773 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963077760/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 03:41:04] 2026-01-10 08:40:18,774 | INFO     | extracted standard info from prmon json
[2026-01-10 03:41:04] 2026-01-10 08:40:18,774 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 03:41:04] 2026-01-10 08:40:18,774 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 03:41:04] 2026-01-10 08:40:18,788 | INFO     | fitting pss+swap vs Time
[2026-01-10 03:41:04] 2026-01-10 08:40:18,789 | INFO     | sum of square deviations: 323317836074.387
[2026-01-10 03:41:04] 2026-01-10 08:40:18,806 | INFO     | sum of deviations: 1397774781698.371
[2026-01-10 03:41:04] 2026-01-10 08:40:18,806 | INFO     | mean x: 1768003479.4289942
[2026-01-10 03:41:04] 2026-01-10 08:40:18,806 | INFO     | mean y: 2907636.137080868
[2026-01-10 03:41:04] 2026-01-10 08:40:18,806 | INFO     | intersect: -7640563901.054106
[2026-01-10 03:41:04] 2026-01-10 08:40:18,807 | INFO     | chi2: 6.473119017370987
[2026-01-10 03:41:04] 2026-01-10 08:40:18,808 | INFO     | sum of square deviations: 318559889863.7797
[2026-01-10 03:41:04] 2026-01-10 08:40:18,825 | INFO     | sum of deviations: 1705124183633.915
[2026-01-10 03:41:04] 2026-01-10 08:40:18,825 | INFO     | mean x: 1768003326.9435084
[2026-01-10 03:41:04] 2026-01-10 08:40:18,825 | INFO     | mean y: 2917479.086223984
[2026-01-10 03:41:04] 2026-01-10 08:40:18,825 | INFO     | intersect: -9460499998.882221
[2026-01-10 03:41:04] 2026-01-10 08:40:18,826 | INFO     | chi2: 3.7958674207451026
[2026-01-10 03:41:04] 2026-01-10 08:40:18,826 | INFO     | current chi2=3.7958674207451026 (change=41.3595299181326 %)
[2026-01-10 03:41:04] 2026-01-10 08:40:18,827 | INFO     | sum of square deviations: 313848874765.2431
[2026-01-10 03:41:04] 2026-01-10 08:40:18,843 | INFO     | sum of deviations: 1871984358792.4263
[2026-01-10 03:41:04] 2026-01-10 08:40:18,843 | INFO     | mean x: 1768003174.4581673
[2026-01-10 03:41:04] 2026-01-10 08:40:18,843 | INFO     | mean y: 2922879.033864542
[2026-01-10 03:41:04] 2026-01-10 08:40:18,843 | INFO     | intersect: -10542516518.69111
[2026-01-10 03:41:04] 2026-01-10 08:40:18,844 | INFO     | chi2: 2.9416875896108925
[2026-01-10 03:41:04] 2026-01-10 08:40:18,844 | INFO     | current chi2=2.9416875896108925 (change=22.502888969882424 %)
[2026-01-10 03:41:04] 2026-01-10 08:40:18,844 | INFO     | right removable region: 1003
[2026-01-10 03:41:04] 2026-01-10 08:40:18,845 | INFO     | sum of square deviations: 318558139900.6659
[2026-01-10 03:41:04] 2026-01-10 08:40:18,861 | INFO     | sum of deviations: 1185718946158.1938
[2026-01-10 03:41:04] 2026-01-10 08:40:18,861 | INFO     | mean x: 1768003631.9425173
[2026-01-10 03:41:04] 2026-01-10 08:40:18,861 | INFO     | mean y: 2914417.7274529235
[2026-01-10 03:41:04] 2026-01-10 08:40:18,861 | INFO     | intersect: -6577847900.650081
[2026-01-10 03:41:04] 2026-01-10 08:40:18,862 | INFO     | chi2: 4.87402103502044
[2026-01-10 03:41:04] 2026-01-10 08:40:18,862 | INFO     | current chi2=4.87402103502044 (change=24.703670333563707 %)
[2026-01-10 03:41:04] 2026-01-10 08:40:18,862 | INFO     | left removable region: 10
[2026-01-10 03:41:04] 2026-01-10 08:40:18,863 | INFO     | sum of square deviations: 303645739415.5969
[2026-01-10 03:41:04] 2026-01-10 08:40:18,879 | INFO     | sum of deviations: 1654347094940.514
[2026-01-10 03:41:04] 2026-01-10 08:40:18,879 | INFO     | mean x: 1768003448.979859
[2026-01-10 03:41:04] 2026-01-10 08:40:18,879 | INFO     | mean y: 2932050.5256797583
[2026-01-10 03:41:04] 2026-01-10 08:40:18,879 | INFO     | intersect: -9629646280.0445
[2026-01-10 03:41:04] 2026-01-10 08:40:18,880 | INFO     | chi2: 1.1720960405286203
[2026-01-10 03:41:04] 2026-01-10 08:40:18,880 | INFO     | current memory leak: 5.45 B/s (using 993 data points, chi2=1.17)
[2026-01-10 03:41:04] 2026-01-10 08:40:18,880 | INFO     | could have reported an average CPU frequency of 3290 MHz (37 samples)
[2026-01-10 03:41:04] 2026-01-10 08:40:18,881 | INFO     | ..............................
[2026-01-10 03:41:04] 2026-01-10 08:40:18,881 | INFO     | . Timing measurements:
[2026-01-10 03:41:04] 2026-01-10 08:40:18,881 | INFO     | . get job = 0 s
[2026-01-10 03:41:04] 2026-01-10 08:40:18,881 | INFO     | . initial setup = 2 s
[2026-01-10 03:41:04] 2026-01-10 08:40:18,881 | INFO     | . payload setup = 6 s
[2026-01-10 03:41:04] 2026-01-10 08:40:18,881 | INFO     | . stage-in = 0 s
[2026-01-10 03:41:04] 2026-01-10 08:40:18,881 | INFO     | . payload execution = 61817 s
[2026-01-10 03:41:04] 2026-01-10 08:40:18,881 | INFO     | . stage-out = 7 s
[2026-01-10 03:41:04] 2026-01-10 08:40:18,881 | INFO     | . log creation = 1 s
[2026-01-10 03:41:04] 2026-01-10 08:40:18,881 | INFO     | ..............................
[2026-01-10 03:41:04] 2026-01-10 08:40:19,052 | INFO     | 
[2026-01-10 03:41:04] 2026-01-10 08:40:19,052 | INFO     | job summary report
[2026-01-10 03:41:04] 2026-01-10 08:40:19,052 | INFO     | --------------------------------------------------
[2026-01-10 03:41:04] 2026-01-10 08:40:19,052 | INFO     | PanDA job id: 6963077760
[2026-01-10 03:41:04] 2026-01-10 08:40:19,052 | INFO     | task id: 47962010
[2026-01-10 03:41:04] 2026-01-10 08:40:19,052 | INFO     | errors: (none)
[2026-01-10 03:41:04] 2026-01-10 08:40:19,052 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 03:41:04] 2026-01-10 08:40:19,052 | INFO     | pilot state: finished 
[2026-01-10 03:41:04] 2026-01-10 08:40:19,052 | INFO     | transexitcode: 0
[2026-01-10 03:41:04] 2026-01-10 08:40:19,052 | INFO     | exeerrorcode: 0
[2026-01-10 03:41:04] 2026-01-10 08:40:19,052 | INFO     | exeerrordiag: 
[2026-01-10 03:41:04] 2026-01-10 08:40:19,053 | INFO     | exitcode: 0
[2026-01-10 03:41:04] 2026-01-10 08:40:19,053 | INFO     | exitmsg: OK
[2026-01-10 03:41:04] 2026-01-10 08:40:19,053 | INFO     | cpuconsumptiontime: 106294 s
[2026-01-10 03:41:04] 2026-01-10 08:40:19,053 | INFO     | nevents: 450
[2026-01-10 03:41:04] 2026-01-10 08:40:19,053 | INFO     | neventsw: 0
[2026-01-10 03:41:04] 2026-01-10 08:40:19,053 | INFO     | pid: 1152072
[2026-01-10 03:41:04] 2026-01-10 08:40:19,053 | INFO     | pgrp: 1152072
[2026-01-10 03:41:04] 2026-01-10 08:40:19,053 | INFO     | corecount: 9
[2026-01-10 03:41:04] 2026-01-10 08:40:19,053 | INFO     | event service: False
[2026-01-10 03:41:04] 2026-01-10 08:40:19,053 | INFO     | sizes: {0: 2284619, 7: 2284881, 11: 2284909, 61828: 2339350, 61837: 2348400, 61852: 2348590}
[2026-01-10 03:41:04] 2026-01-10 08:40:19,053 | INFO     | --------------------------------------------------
[2026-01-10 03:41:04] 2026-01-10 08:40:19,053 | INFO     | 
[2026-01-10 03:41:04] 2026-01-10 08:40:19,053 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 03:41:04] 2026-01-10 08:40:19,100 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,100 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,100 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,100 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,100 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,100 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,100 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,100 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,100 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,100 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,100 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,101 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,101 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,101 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,101 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,101 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,101 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,101 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 03:41:04] 2026-01-10 08:40:19,101 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,101 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 03:41:04] 2026-01-10 08:40:19,101 | INFO     | job 6963077760 has completed (purged errors)
[2026-01-10 03:41:04] 2026-01-10 08:40:19,101 | INFO     | overall cleanup function is called
[2026-01-10 03:41:04] 2026-01-10 08:40:20,129 | INFO     | --- collectZombieJob: --- 10, [1152072]
[2026-01-10 03:41:04] 2026-01-10 08:40:20,129 | INFO     | zombie collector waiting for pid 1152072
[2026-01-10 03:41:04] 2026-01-10 08:40:20,129 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 03:41:04] 2026-01-10 08:40:20,129 | INFO     | collected zombie processes
[2026-01-10 03:41:04] 2026-01-10 08:40:20,129 | INFO     | will attempt to kill all subprocesses of pid=1152072
[2026-01-10 03:41:04] 2026-01-10 08:40:21,743 | INFO     | PID=1128290 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 03:41:04] 2026-01-10 08:40:21,743 | INFO     | .. there are 15 such processes running
[2026-01-10 03:41:04] 2026-01-10 08:40:21,780 | INFO     | process IDs to be killed: [1152072] (in reverse order)
[2026-01-10 03:41:04] 2026-01-10 08:40:21,961 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 03:41:04] 2026-01-10 08:40:21,961 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 03:41:04] 2026-01-10 08:40:22,012 | INFO     | did not find any defunct processes belonging to 1152072
[2026-01-10 03:41:04] 2026-01-10 08:40:22,024 | INFO     | did not find any defunct processes belonging to 1152072
[2026-01-10 03:41:04] 2026-01-10 08:40:22,024 | INFO     | ready for new job
[2026-01-10 03:41:04] 2026-01-10 08:40:22,024 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 03:41:04] 2026-01-10 08:40:22,029 | INFO     | ***************************************
[2026-01-10 03:41:04] 2026-01-10 08:40:22,030 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 03:41:04] 2026-01-10 08:40:22,031 | INFO     | ***************************************
[2026-01-10 03:41:04] 2026-01-10 08:40:22,031 | INFO     | 
[2026-01-10 03:41:04] 2026-01-10 08:40:22,034 | INFO     | architecture information:
[2026-01-10 03:41:04] 2026-01-10 08:40:22,045 | INFO     | executing command: cat /etc/os-release
[2026-01-10 03:41:04] 2026-01-10 08:40:22,084 | INFO     | cat /etc/os-release:
[2026-01-10 03:41:04] NAME="CentOS Linux"
[2026-01-10 03:41:04] VERSION="7 (Core)"
[2026-01-10 03:41:04] ID="centos"
[2026-01-10 03:41:04] ID_LIKE="rhel fedora"
[2026-01-10 03:41:04] VERSION_ID="7"
[2026-01-10 03:41:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 03:41:04] ANSI_COLOR="0;31"
[2026-01-10 03:41:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 03:41:04] HOME_URL="https://www.centos.org/"
[2026-01-10 03:41:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 03:41:04] 
[2026-01-10 03:41:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 03:41:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 03:41:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 03:41:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 03:41:04] 
[2026-01-10 03:41:04] 2026-01-10 08:40:22,084 | INFO     | ***************************************
[2026-01-10 03:41:04] 2026-01-10 08:40:22,588 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 03:41:04] 2026-01-10 08:40:22,621 | INFO     | sufficient remaining disk space (84780515328 B)
[2026-01-10 03:41:04] 2026-01-10 08:40:22,621 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 03:41:04] 2026-01-10 08:40:22,621 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 03:41:04] 2026-01-10 08:40:22,621 | INFO     | update_server=False
[2026-01-10 03:41:04] 2026-01-10 08:40:22,621 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 03:41:04] 2026-01-10 08:40:22,623 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 03:41:04] 2026-01-10 08:40:22,627 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:41:04] 2026-01-10 08:40:22,627 | INFO     | aborting loop
[2026-01-10 03:41:04] 2026-01-10 08:40:22,627 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-10 03:41:04] 2026-01-10 08:40:22,628 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 03:41:04] 2026-01-10 08:40:22,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 03:41:04] 2026-01-10 08:40:22,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 03:41:04] 2026-01-10 08:40:23,185 | INFO     | all job control threads have been joined
[2026-01-10 03:41:04] 2026-01-10 08:40:23,558 | INFO     | all data control threads have been joined
[2026-01-10 03:41:04] 2026-01-10 08:40:23,628 | INFO     | [job] retrieve thread has finished
[2026-01-10 03:41:04] 2026-01-10 08:40:23,633 | INFO     | [job] job monitor thread has finished
[2026-01-10 03:41:04] 2026-01-10 08:40:23,645 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 03:41:04] 2026-01-10 08:40:23,807 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 03:41:04] 2026-01-10 08:40:23,881 | INFO     | [data] copytool_in thread has finished
[2026-01-10 03:41:04] 2026-01-10 08:40:23,903 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 03:41:04] 2026-01-10 08:40:23,997 | INFO     | [payload] validate_post thread has finished
[2026-01-10 03:41:04] 2026-01-10 08:40:24,081 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:41:04] 2026-01-10 08:40:24,098 | INFO     | all payload control threads have been joined
[2026-01-10 03:41:04] 2026-01-10 08:40:24,195 | INFO     | [job] control thread has finished
[2026-01-10 03:41:04] 2026-01-10 08:40:24,246 | INFO     | [job] validate thread has finished
[2026-01-10 03:41:04] 2026-01-10 08:40:24,272 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 03:41:04] 2026-01-10 08:40:24,563 | INFO     | [data] control thread has finished
[2026-01-10 03:41:04] 2026-01-10 08:40:24,630 | INFO     | [data] copytool_out thread has finished
[2026-01-10 03:41:04] 2026-01-10 08:40:24,753 | INFO     | [payload] failed_post thread has finished
[2026-01-10 03:41:04] 2026-01-10 08:40:24,926 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 03:41:04] 2026-01-10 08:40:25,087 | INFO     | [job] queue monitor thread has finished
[2026-01-10 03:41:04] 2026-01-10 08:40:25,104 | INFO     | [payload] control thread has finished
[2026-01-10 03:41:04] 2026-01-10 08:40:27,918 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 03:41:04] 2026-01-10 08:40:55,734 | INFO     | [monitor] cgroup control has ended
[2026-01-10 03:41:04] 2026-01-10 08:40:57,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139746476238656)>', '<ExcThread(monitor, started 139745661273856)>']
[2026-01-10 03:41:04] 2026-01-10 08:40:57,900 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 03:41:04] 2026-01-10 08:40:57,902 | INFO     | [monitor] control thread has ended
[2026-01-10 03:41:04] 2026-01-10 08:41:02,846 | INFO     | all workflow threads have been joined
[2026-01-10 03:41:04] 2026-01-10 08:41:02,846 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 03:41:04] 2026-01-10 08:41:02,846 | INFO     | traces error code: 0
[2026-01-10 03:41:04] 2026-01-10 08:41:02,846 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 03:41:04] 2026-01-10 08:41:03,408 [wrapper] ==== pilot stdout END ====
[2026-01-10 03:41:04] 2026-01-10 08:41:03,446 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 03:41:04] 2026-01-10 08:41:03,474 [wrapper] pilotpid: 1128290
[2026-01-10 03:41:04] 2026-01-10 08:41:03,513 [wrapper] Pilot exit status: 0
[2026-01-10 03:41:04] 2026-01-10 08:41:03,684 [wrapper] pandaids: 6963077760 6963077760
[2026-01-10 03:41:04] 2026-01-10 08:41:03,855 [wrapper] cleanup supervisor_pilot  348918 1128291
[2026-01-10 03:41:04] 2026-01-10 08:41:03,858 [wrapper] Test setup, not cleaning
[2026-01-10 03:41:04] 2026-01-10 08:41:03,860 [wrapper] apfmon messages muted
[2026-01-10 03:41:04] 2026-01-10 08:41:03,862 [wrapper] ==== wrapper stdout END ====
[2026-01-10 03:41:04] 2026-01-10 08:41:03,864 [wrapper] ==== wrapper stderr END ====
[2026-01-10 03:41:04]  *** Error codes and diagnostics ***
[2026-01-10 03:41:04]     "exeErrorCode": 0,
[2026-01-10 03:41:04]     "exeErrorDiag": "",
[2026-01-10 03:41:04]     "pilotErrorCode": 0,
[2026-01-10 03:41:04]     "pilotErrorDiag": "",
[2026-01-10 03:41:04]  *** Listing of results directory ***
[2026-01-10 03:41:04] total 1184876
[2026-01-10 03:41:04] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-10 03:41:04] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-10 03:41:04] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:56 queuedata.json
[2026-01-10 03:41:04] -rwx------. 1 boincer umatlas     36322 Jan  8 06:56 runpilot2-wrapper.sh
[2026-01-10 03:41:04] -rw-r--r--. 1 boincer umatlas       100 Jan  9 03:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 03:41:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 03:40 run_atlas
[2026-01-10 03:41:04] -rw-r--r--. 1 boincer umatlas       105 Jan  9 03:40 job.xml
[2026-01-10 03:41:04] -rw-r--r--. 3 boincer umatlas 392998403 Jan  9 03:41 EVNT.47962006._000042.pool.root.1
[2026-01-10 03:41:04] -rw-r--r--. 3 boincer umatlas 392998403 Jan  9 03:41 ATLAS.root_0
[2026-01-10 03:41:04] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 03:41 start_atlas.sh
[2026-01-10 03:41:04] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 03:41 shared
[2026-01-10 03:41:04] -rw-r--r--. 2 boincer umatlas    592607 Jan  9 03:41 input.tar.gz
[2026-01-10 03:41:04] -rw-r--r--. 1 boincer umatlas         0 Jan  9 03:41 boinc_lockfile
[2026-01-10 03:41:04] -rw-r--r--. 1 boincer umatlas      2890 Jan  9 10:28 pandaJob.out
[2026-01-10 03:41:04] -rw-------. 1 boincer umatlas        57 Jan  9 10:28 setup.sh.local
[2026-01-10 03:41:04] -rw-------. 1 boincer umatlas    989377 Jan  9 10:29 agis_schedconf.cvmfs.json
[2026-01-10 03:41:04] -rw-r--r--. 1 boincer umatlas       533 Jan 10 03:14 boinc_task_state.xml
[2026-01-10 03:41:04] -rw-r--r--. 1 boincer umatlas      6903 Jan 10 03:39 init_data.xml
[2026-01-10 03:41:04] -rw-------. 1 boincer umatlas 402708607 Jan 10 03:39 HITS.47962010._000258.pool.root.1
[2026-01-10 03:41:04] -rw-------. 1 boincer umatlas      1055 Jan 10 03:39 memory_monitor_summary.json
[2026-01-10 03:41:04] -rw-------. 1 boincer umatlas   1516240 Jan 10 03:39 agis_ddmendpoints.agis.ALL.json
[2026-01-10 03:41:04] -rw-------. 1 boincer umatlas   2117565 Jan 10 03:40 log.47962010._000258.job.log.tgz.1
[2026-01-10 03:41:04] -rw-------. 1 boincer umatlas      8603 Jan 10 03:40 heartbeat.json
[2026-01-10 03:41:04] -rw-------. 1 boincer umatlas        96 Jan 10 03:40 pilot_heartbeat.json
[2026-01-10 03:41:04] -rw-r--r--. 1 boincer umatlas        29 Jan 10 03:41 wrapper_checkpoint.txt
[2026-01-10 03:41:04] -rw-------. 1 boincer umatlas      4552 Jan 10 03:41 pilotlog.txt
[2026-01-10 03:41:04] -rw-------. 1 boincer umatlas   8222627 Jan 10 03:41 log.47962010._000258.job.log.1
[2026-01-10 03:41:04] -rw-------. 1 boincer umatlas       353 Jan 10 03:41 output.list
[2026-01-10 03:41:04] -rw-r--r--. 1 boincer umatlas       620 Jan 10 03:41 runtime_log
[2026-01-10 03:41:04] -rw-------. 1 boincer umatlas  10362880 Jan 10 03:41 result.tar.gz
[2026-01-10 03:41:04] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 03:41 boinc_mmap_file
[2026-01-10 03:41:04] -rw-r--r--. 1 boincer umatlas      9428 Jan 10 03:41 runtime_log.err
[2026-01-10 03:41:04] -rw-------. 1 boincer umatlas       789 Jan 10 03:41 GvWMDmBo3x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNUkKDm2o8NFo.diag
[2026-01-10 03:41:04] -rw-r--r--. 1 boincer umatlas     23723 Jan 10 03:41 stderr.txt
[2026-01-10 03:41:04] HITS file was successfully produced:
[2026-01-10 03:41:04] -rw-------. 1 boincer umatlas 402708607 Jan 10 03:39 shared/HITS.pool.root.1
[2026-01-10 03:41:04]  *** Contents of shared directory: ***
[2026-01-10 03:41:05] total 787784
[2026-01-10 03:41:05] -rw-r--r--. 3 boincer umatlas 392998403 Jan  9 03:41 ATLAS.root_0
[2026-01-10 03:41:05] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 03:41 start_atlas.sh
[2026-01-10 03:41:05] -rw-r--r--. 2 boincer umatlas    592607 Jan  9 03:41 input.tar.gz
[2026-01-10 03:41:05] -rw-------. 1 boincer umatlas 402708607 Jan 10 03:39 HITS.pool.root.1
[2026-01-10 03:41:05] -rw-------. 1 boincer umatlas  10362880 Jan 10 03:41 result.tar.gz
03:41:26 (1116641): run_atlas exited; CPU time 106342.182488
03:41:26 (1116641): called boinc_finish(0)

</stderr_txt>
]]>

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