Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:10 (3367341): wrapper (7.7.26015): starting
00:10:10 (3367341): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:10:10] Arguments: --nthreads 8
[2026-01-09 00:10:10] Threads: 8
[2026-01-09 00:10:10] Checking for CVMFS
[2026-01-09 00:10:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:10:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:10:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:10:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:10:13] 2.13.3.0 10228 23619 196000 154932 1 181 30900929 32935936 24672 16776704 0 100107617 99.843 56194021 32916 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:10:13] CVMFS is ok
[2026-01-09 00:10:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:10:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:10:13] Further information can be found at the LHC@home message board.
[2026-01-09 00:10:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:10:13] Checking for apptainer binary...
[2026-01-09 00:10:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:10:13] Running /usr/bin/apptainer --version
[2026-01-09 00:10:14] apptainer version 1.4.5-2.el9
[2026-01-09 00:10:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:10:15] c-8-1.aglt2.org
[2026-01-09 00:10:15] apptainer works
[2026-01-09 00:10:15] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:10:15] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:10:15] Starting ATLAS job with PandaID=6963144547
[2026-01-09 00:10:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:13:06]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:13:06] 2026-01-10 02:11:58,824 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 21:13:06] 2026-01-10 02:11:58,836 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.175974999999
[2026-01-09 21:13:06] 2026-01-10 02:11:58,861 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963144547/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:13:06] 2026-01-10 02:11:58,867 | INFO     | extracted standard info from prmon json
[2026-01-09 21:13:06] 2026-01-10 02:11:58,867 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:13:06] 2026-01-10 02:11:58,867 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:13:06] 2026-01-10 02:11:58,868 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:13:06] 2026-01-10 02:11:58,868 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:13:06] 2026-01-10 02:11:58,933 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:13:06] 2026-01-10 02:11:58,935 | INFO     | sum of square deviations: 584063304817.8864
[2026-01-09 21:13:06] 2026-01-10 02:11:59,146 | INFO     | time since job start (75578s) is within the limit (174528.0s)
[2026-01-09 21:13:06] 2026-01-10 02:11:59,168 | INFO     | sum of deviations: 1975693671605.5396
[2026-01-09 21:13:06] 2026-01-10 02:11:59,169 | INFO     | mean x: 1767973439.3319838
[2026-01-09 21:13:06] 2026-01-10 02:11:59,169 | INFO     | mean y: 2489486.7230769233
[2026-01-09 21:13:06] 2026-01-10 02:11:59,169 | INFO     | intersect: -5977981991.011698
[2026-01-09 21:13:06] 2026-01-10 02:11:59,180 | INFO     | chi2: 6.512492210924632
[2026-01-09 21:13:06] 2026-01-10 02:11:59,182 | INFO     | sum of square deviations: 576998212922.154
[2026-01-09 21:13:06] 2026-01-10 02:11:59,252 | INFO     | sum of deviations: 2040221870805.231
[2026-01-09 21:13:06] 2026-01-10 02:11:59,253 | INFO     | mean x: 1767973286.8365853
[2026-01-09 21:13:06] 2026-01-10 02:11:59,253 | INFO     | mean y: 2490873.9414634146
[2026-01-09 21:13:06] 2026-01-10 02:11:59,253 | INFO     | intersect: -6248928430.350314
[2026-01-09 21:13:06] 2026-01-10 02:11:59,255 | INFO     | chi2: 5.833166572478235
[2026-01-09 21:13:06] 2026-01-10 02:11:59,255 | INFO     | current chi2=5.833166572478235 (change=10.43111632911954 %)
[2026-01-09 21:13:06] 2026-01-10 02:11:59,255 | INFO     | right removable region: 1229
[2026-01-09 21:13:06] 2026-01-10 02:11:59,257 | INFO     | sum of square deviations: 576997359654.1542
[2026-01-09 21:13:06] 2026-01-10 02:11:59,307 | INFO     | sum of deviations: 1579487965583.1416
[2026-01-09 21:13:06] 2026-01-10 02:11:59,308 | INFO     | mean x: 1767973591.8365853
[2026-01-09 21:13:06] 2026-01-10 02:11:59,308 | INFO     | mean y: 2498035.756910569
[2026-01-09 21:13:06] 2026-01-10 02:11:59,308 | INFO     | intersect: -4837200040.93529
[2026-01-09 21:13:06] 2026-01-10 02:11:59,310 | INFO     | chi2: 2.8741024939485604
[2026-01-09 21:13:06] 2026-01-10 02:11:59,310 | INFO     | current chi2=2.8741024939485604 (change=55.86785517950737 %)
[2026-01-09 21:13:06] 2026-01-10 02:11:59,311 | INFO     | sum of square deviations: 569988924492.0881
[2026-01-09 21:13:06] 2026-01-10 02:11:59,366 | INFO     | sum of deviations: 1356745313892.1113
[2026-01-09 21:13:06] 2026-01-10 02:11:59,366 | INFO     | mean x: 1767973744.3379593
[2026-01-09 21:13:06] 2026-01-10 02:11:59,366 | INFO     | mean y: 2502878.8040816328
[2026-01-09 21:13:06] 2026-01-10 02:11:59,366 | INFO     | intersect: -4205807124.5039067
[2026-01-09 21:13:06] 2026-01-10 02:11:59,368 | INFO     | chi2: 1.6859203346298488
[2026-01-09 21:13:06] 2026-01-10 02:11:59,368 | INFO     | current chi2=1.6859203346298488 (change=41.340980769490166 %)
[2026-01-09 21:13:06] 2026-01-10 02:11:59,370 | INFO     | sum of square deviations: 563037691438.54
[2026-01-09 21:13:06] 2026-01-10 02:11:59,435 | INFO     | sum of deviations: 1264953976249.4963
[2026-01-09 21:13:06] 2026-01-10 02:11:59,435 | INFO     | mean x: 1767973896.8368852
[2026-01-09 21:13:06] 2026-01-10 02:11:59,435 | INFO     | mean y: 2504891.731147541
[2026-01-09 21:13:06] 2026-01-10 02:11:59,435 | INFO     | intersect: -3969530452.8213687
[2026-01-09 21:13:06] 2026-01-10 02:11:59,437 | INFO     | chi2: 1.5373277212307466
[2026-01-09 21:13:06] 2026-01-10 02:11:59,437 | INFO     | current chi2=1.5373277212307466 (change=8.813738724595572 %)
[2026-01-09 21:13:06] 2026-01-10 02:11:59,438 | INFO     | left removable region: 30
[2026-01-09 21:13:06] 2026-01-10 02:11:59,440 | INFO     | sum of square deviations: 534459641091.7999
[2026-01-09 21:13:06] 2026-01-10 02:11:59,480 | INFO     | sum of deviations: 1227108242922.1782
[2026-01-09 21:13:06] 2026-01-10 02:11:59,481 | INFO     | mean x: 1767974171.3419516
[2026-01-09 21:13:06] 2026-01-10 02:11:59,481 | INFO     | mean y: 2508599.9824854047
[2026-01-09 21:13:06] 2026-01-10 02:11:59,481 | INFO     | intersect: -4056723402.0735483
[2026-01-09 21:13:06] 2026-01-10 02:11:59,483 | INFO     | chi2: 0.820955010128286
[2026-01-09 21:13:06] 2026-01-10 02:11:59,483 | INFO     | current memory leak: 2.30 B/s (using 1199 data points, chi2=0.82)
[2026-01-09 21:13:06] 2026-01-10 02:11:59,484 | INFO     | could have reported an average CPU frequency of 2600 MHz (44 samples)
[2026-01-09 21:13:06] 2026-01-10 02:11:59,484 | INFO     | ..............................
[2026-01-09 21:13:06] 2026-01-10 02:11:59,485 | INFO     | . Timing measurements:
[2026-01-09 21:13:06] 2026-01-10 02:11:59,485 | INFO     | . get job = 1 s
[2026-01-09 21:13:06] 2026-01-10 02:11:59,485 | INFO     | . initial setup = 9 s
[2026-01-09 21:13:06] 2026-01-10 02:11:59,485 | INFO     | . payload setup = 68 s
[2026-01-09 21:13:06] 2026-01-10 02:11:59,485 | INFO     | . stage-in = 0 s
[2026-01-09 21:13:06] 2026-01-10 02:11:59,485 | INFO     | . payload execution = 75346 s
[2026-01-09 21:13:06] 2026-01-10 02:11:59,485 | INFO     | . stage-out = 4 s
[2026-01-09 21:13:06] 2026-01-10 02:11:59,485 | INFO     | . log creation = 0 s
[2026-01-09 21:13:06] 2026-01-10 02:11:59,485 | INFO     | ..............................
[2026-01-09 21:13:06] 2026-01-10 02:11:59,602 | INFO     | 
[2026-01-09 21:13:06] 2026-01-10 02:11:59,603 | INFO     | job summary report
[2026-01-09 21:13:06] 2026-01-10 02:11:59,603 | INFO     | --------------------------------------------------
[2026-01-09 21:13:06] 2026-01-10 02:11:59,603 | INFO     | PanDA job id: 6963144547
[2026-01-09 21:13:06] 2026-01-10 02:11:59,603 | INFO     | task id: 47898826
[2026-01-09 21:13:06] 2026-01-10 02:11:59,603 | INFO     | errors: (none)
[2026-01-09 21:13:06] 2026-01-10 02:11:59,603 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:13:06] 2026-01-10 02:11:59,603 | INFO     | pilot state: finished 
[2026-01-09 21:13:06] 2026-01-10 02:11:59,603 | INFO     | transexitcode: 0
[2026-01-09 21:13:06] 2026-01-10 02:11:59,604 | INFO     | exeerrorcode: 0
[2026-01-09 21:13:06] 2026-01-10 02:11:59,604 | INFO     | exeerrordiag: 
[2026-01-09 21:13:06] 2026-01-10 02:11:59,604 | INFO     | exitcode: 0
[2026-01-09 21:13:06] 2026-01-10 02:11:59,604 | INFO     | exitmsg: OK
[2026-01-09 21:13:06] 2026-01-10 02:11:59,604 | INFO     | cpuconsumptiontime: 69748 s
[2026-01-09 21:13:06] 2026-01-10 02:11:59,604 | INFO     | nevents: 400
[2026-01-09 21:13:06] 2026-01-10 02:11:59,604 | INFO     | neventsw: 0
[2026-01-09 21:13:06] 2026-01-10 02:11:59,604 | INFO     | pid: 3409811
[2026-01-09 21:13:06] 2026-01-10 02:11:59,604 | INFO     | pgrp: 3409811
[2026-01-09 21:13:06] 2026-01-10 02:11:59,604 | INFO     | corecount: 8
[2026-01-09 21:13:06] 2026-01-10 02:11:59,604 | INFO     | event service: False
[2026-01-09 21:13:06] 2026-01-10 02:11:59,605 | INFO     | sizes: {0: 2283741, 1: 2283825, 2: 2284024, 14: 2284024, 26: 2284052, 39: 2284080, 50: 2284236, 62: 2284264, 63: 2284554, 73: 2284582, 75418: 2340649, 75424: 23496
[2026-01-09 21:13:06] 2026-01-10 02:11:59,605 | INFO     | --------------------------------------------------
[2026-01-09 21:13:06] 2026-01-10 02:11:59,605 | INFO     | 
[2026-01-09 21:13:06] 2026-01-10 02:11:59,605 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 21:13:06] 2026-01-10 02:11:59,626 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,627 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,627 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,627 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,627 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,627 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,627 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,628 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:13:06] 2026-01-10 02:11:59,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,629 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:13:06] 2026-01-10 02:11:59,629 | INFO     | job 6963144547 has completed (purged errors)
[2026-01-09 21:13:06] 2026-01-10 02:11:59,629 | INFO     | overall cleanup function is called
[2026-01-09 21:13:06] 2026-01-10 02:12:00,637 | INFO     | --- collectZombieJob: --- 10, [3409811]
[2026-01-09 21:13:06] 2026-01-10 02:12:00,638 | INFO     | zombie collector waiting for pid 3409811
[2026-01-09 21:13:06] 2026-01-10 02:12:00,638 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:13:06] 2026-01-10 02:12:00,638 | INFO     | collected zombie processes
[2026-01-09 21:13:06] 2026-01-10 02:12:00,638 | INFO     | will attempt to kill all subprocesses of pid=3409811
[2026-01-09 21:13:06] 2026-01-10 02:12:01,367 | INFO     | process IDs to be killed: [3409811] (in reverse order)
[2026-01-09 21:13:06] 2026-01-10 02:12:01,516 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:13:06] 2026-01-10 02:12:01,516 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:13:06] 2026-01-10 02:12:01,549 | INFO     | did not find any defunct processes belonging to 3409811
[2026-01-09 21:13:06] 2026-01-10 02:12:01,573 | INFO     | did not find any defunct processes belonging to 3409811
[2026-01-09 21:13:06] 2026-01-10 02:12:01,573 | INFO     | ready for new job
[2026-01-09 21:13:06] 2026-01-10 02:12:01,573 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:13:06] 2026-01-10 02:12:01,583 | INFO     | ***************************************
[2026-01-09 21:13:06] 2026-01-10 02:12:01,583 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:13:06] 2026-01-10 02:12:01,583 | INFO     | ***************************************
[2026-01-09 21:13:06] 2026-01-10 02:12:01,583 | INFO     | 
[2026-01-09 21:13:06] 2026-01-10 02:12:01,589 | INFO     | architecture information:
[2026-01-09 21:13:06] 2026-01-10 02:12:01,590 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:13:06] 2026-01-10 02:12:01,659 | INFO     | cat /etc/os-release:
[2026-01-09 21:13:06] NAME="CentOS Linux"
[2026-01-09 21:13:06] VERSION="7 (Core)"
[2026-01-09 21:13:06] ID="centos"
[2026-01-09 21:13:06] ID_LIKE="rhel fedora"
[2026-01-09 21:13:06] VERSION_ID="7"
[2026-01-09 21:13:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:13:06] ANSI_COLOR="0;31"
[2026-01-09 21:13:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:13:06] HOME_URL="https://www.centos.org/"
[2026-01-09 21:13:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:13:06] 
[2026-01-09 21:13:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:13:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:13:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:13:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:13:06] 
[2026-01-09 21:13:06] 2026-01-10 02:12:01,659 | INFO     | ***************************************
[2026-01-09 21:13:06] 2026-01-10 02:12:02,163 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 21:13:06] 2026-01-10 02:12:02,199 | INFO     | sufficient remaining disk space (75798413312 B)
[2026-01-09 21:13:06] 2026-01-10 02:12:02,199 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:13:06] 2026-01-10 02:12:02,199 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:13:06] 2026-01-10 02:12:02,200 | INFO     | update_server=False
[2026-01-09 21:13:06] 2026-01-10 02:12:02,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:13:06] 2026-01-10 02:12:02,200 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:13:06] 2026-01-10 02:12:02,201 | INFO     | aborting loop
[2026-01-09 21:13:06] 2026-01-10 02:12:02,204 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:13:06] 2026-01-10 02:12:02,355 | INFO     | all payload control threads have been joined
[2026-01-09 21:13:06] 2026-01-10 02:12:02,704 | INFO     | all data control threads have been joined
[2026-01-09 21:13:06] 2026-01-10 02:12:02,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:13:06] 2026-01-10 02:12:03,206 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:13:06] 2026-01-10 02:12:03,216 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:13:06] 2026-01-10 02:12:03,270 | INFO     | [job] validate thread has finished
[2026-01-09 21:13:06] 2026-01-10 02:12:03,360 | INFO     | [payload] control thread has finished
[2026-01-09 21:13:06] 2026-01-10 02:12:03,466 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:13:06] 2026-01-10 02:12:03,502 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:13:06] 2026-01-10 02:12:03,710 | INFO     | [data] control thread has finished
[2026-01-09 21:13:06] 2026-01-10 02:12:03,883 | INFO     | all job control threads have been joined
[2026-01-09 21:13:06] 2026-01-10 02:12:04,021 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:13:06] 2026-01-10 02:12:04,111 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:13:06] 2026-01-10 02:12:04,214 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:13:06] 2026-01-10 02:12:04,366 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:13:06] 2026-01-10 02:12:04,483 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:13:06] 2026-01-10 02:12:04,571 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:13:06] 2026-01-10 02:12:04,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:13:06] 2026-01-10 02:12:04,889 | INFO     | [job] control thread has finished
[2026-01-09 21:13:06] 2026-01-10 02:12:05,628 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:13:06] 2026-01-10 02:12:06,766 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:13:06] 2026-01-10 02:12:30,961 [wrapper] supervise_pilot (15 min periods counter: 85)
[2026-01-09 21:13:06] 2026-01-10 02:12:32,924 | INFO     | PID=3377957 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:13:06] 2026-01-10 02:12:32,925 | INFO     | .. there are 34 such processes running
[2026-01-09 21:13:06] 2026-01-10 02:12:32,926 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:13:06] 2026-01-10 02:12:32,926 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:13:06] 2026-01-10 02:12:32,926 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:13:06] 2026-01-10 02:12:58,845 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:13:06] 2026-01-10 02:13:00,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140502737237824)>', '<ExcThread(monitor, started 140502364038912)>']
[2026-01-09 21:13:06] 2026-01-10 02:13:00,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:13:06] 2026-01-10 02:13:00,114 | INFO     | [monitor] control thread has ended
[2026-01-09 21:13:06] 2026-01-10 02:13:05,055 | INFO     | all workflow threads have been joined
[2026-01-09 21:13:06] 2026-01-10 02:13:05,056 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:13:06] 2026-01-10 02:13:05,056 | INFO     | traces error code: 0
[2026-01-09 21:13:06] 2026-01-10 02:13:05,056 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:13:06] 2026-01-10 02:13:05,419 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:13:06] 2026-01-10 02:13:05,472 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:13:06] 2026-01-10 02:13:05,526 [wrapper] pilotpid: 3377957
[2026-01-09 21:13:06] 2026-01-10 02:13:05,564 [wrapper] Pilot exit status: 0
[2026-01-09 21:13:06] 2026-01-10 02:13:05,682 [wrapper] pandaids: 6963144547
[2026-01-09 21:13:06] 2026-01-10 02:13:06,135 [wrapper] cleanup supervisor_pilot  832404 3377958
[2026-01-09 21:13:06] 2026-01-10 02:13:06,140 [wrapper] Test setup, not cleaning
[2026-01-09 21:13:06] 2026-01-10 02:13:06,143 [wrapper] apfmon messages muted
[2026-01-09 21:13:06] 2026-01-10 02:13:06,146 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:13:06] 2026-01-10 02:13:06,148 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:13:06]  *** Error codes and diagnostics ***
[2026-01-09 21:13:06]     "exeErrorCode": 0,
[2026-01-09 21:13:06]     "exeErrorDiag": "",
[2026-01-09 21:13:06]     "pilotErrorCode": 0,
[2026-01-09 21:13:06]     "pilotErrorDiag": "",
[2026-01-09 21:13:06]  *** Listing of results directory ***
[2026-01-09 21:13:06] total 442744
[2026-01-09 21:13:06] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 07:19 pilot3.tar.gz
[2026-01-09 21:13:06] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 07:19 queuedata.json
[2026-01-09 21:13:06] -rwx------. 1 boincer umatlas     36322 Jan  8 07:19 runpilot2-wrapper.sh
[2026-01-09 21:13:06] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:13:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:10 run_atlas
[2026-01-09 21:13:06] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:10 job.xml
[2026-01-09 21:13:06] -rw-r--r--. 2 boincer umatlas 222581106 Jan  9 00:10 EVNT.47898824._001029.pool.root.1
[2026-01-09 21:13:06] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:10 start_atlas.sh
[2026-01-09 21:13:06] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:10 shared
[2026-01-09 21:13:06] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 00:10 input.tar.gz
[2026-01-09 21:13:06] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:10 boinc_lockfile
[2026-01-09 21:13:06] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 00:10 pandaJob.out
[2026-01-09 21:13:06] -rw-------. 1 boincer umatlas        57 Jan  9 00:10 setup.sh.local
[2026-01-09 21:13:06] -rw-------. 1 boincer umatlas    989771 Jan  9 00:12 agis_schedconf.cvmfs.json
[2026-01-09 21:13:06] drwx------. 5 boincer umatlas      4096 Jan  9 00:12 pilot3
[2026-01-09 21:13:06] -rw-r--r--. 1 boincer umatlas      6659 Jan  9 21:10 init_data.xml
[2026-01-09 21:13:06] -rw-------. 1 boincer umatlas 209191864 Jan  9 21:10 HITS.47898826._025674.pool.root.1
[2026-01-09 21:13:06] -rw-r--r--. 1 boincer umatlas       531 Jan  9 21:10 boinc_task_state.xml
[2026-01-09 21:13:06] -rw-------. 1 boincer umatlas      1063 Jan  9 21:11 memory_monitor_summary.json
[2026-01-09 21:13:06] -rw-------. 1 boincer umatlas   1516240 Jan  9 21:11 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:13:06] -rw-------. 1 boincer umatlas   1098977 Jan  9 21:11 log.47898826._025674.job.log.tgz.1
[2026-01-09 21:13:06] -rw-------. 1 boincer umatlas      7854 Jan  9 21:11 heartbeat.json
[2026-01-09 21:13:06] -rw-------. 1 boincer umatlas        95 Jan  9 21:12 pilot_heartbeat.json
[2026-01-09 21:13:06] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:12 boinc_mmap_file
[2026-01-09 21:13:06] -rw-r--r--. 1 boincer umatlas        28 Jan  9 21:12 wrapper_checkpoint.txt
[2026-01-09 21:13:06] -rw-------. 1 boincer umatlas      4824 Jan  9 21:13 pilotlog.txt
[2026-01-09 21:13:06] -rw-------. 1 boincer umatlas   7740138 Jan  9 21:13 log.47898826._025674.job.log.1
[2026-01-09 21:13:06] -rw-------. 1 boincer umatlas       357 Jan  9 21:13 output.list
[2026-01-09 21:13:06] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:13 runtime_log
[2026-01-09 21:13:06] -rw-------. 1 boincer umatlas   8857600 Jan  9 21:13 result.tar.gz
[2026-01-09 21:13:06] -rw-r--r--. 1 boincer umatlas      9328 Jan  9 21:13 runtime_log.err
[2026-01-09 21:13:06] -rw-------. 1 boincer umatlas       659 Jan  9 21:13 ljiMDmUA4x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxJfKDmHs8hXm.diag
[2026-01-09 21:13:06] -rw-r--r--. 1 boincer umatlas     21203 Jan  9 21:13 stderr.txt
[2026-01-09 21:13:06] HITS file was successfully produced:
[2026-01-09 21:13:06] -rw-------. 1 boincer umatlas 209191864 Jan  9 21:10 shared/HITS.pool.root.1
[2026-01-09 21:13:06]  *** Contents of shared directory: ***
[2026-01-09 21:13:06] total 430912
[2026-01-09 21:13:06] -rw-r--r--. 2 boincer umatlas 222581106 Jan  9 00:10 ATLAS.root_0
[2026-01-09 21:13:06] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:10 start_atlas.sh
[2026-01-09 21:13:06] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 00:10 input.tar.gz
[2026-01-09 21:13:06] -rw-------. 1 boincer umatlas 209191864 Jan  9 21:10 HITS.pool.root.1
[2026-01-09 21:13:06] -rw-------. 1 boincer umatlas   8857600 Jan  9 21:13 result.tar.gz
21:13:08 (3367341): run_atlas exited; CPU time 72947.897496
21:13:08 (3367341): called boinc_finish(0)

</stderr_txt>
]]>

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