Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:14 (3735777): wrapper (7.7.26015): starting
00:05:14 (3735777): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:05:14] Arguments: --nthreads 8
[2026-01-09 00:05:14] Threads: 8
[2026-01-09 00:05:14] Checking for CVMFS
[2026-01-09 00:05:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:05:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:05:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:05:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:05:18] 2.13.3.0 8980 92970 357444 154931 3 425 22727290 32935936 30013 16776704 0 437961871 99.709 328502369 33572 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:05:18] CVMFS is ok
[2026-01-09 00:05:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:05:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:05:18] Further information can be found at the LHC@home message board.
[2026-01-09 00:05:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:05:18] Checking for apptainer binary...
[2026-01-09 00:05:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:05:18] Running /usr/bin/apptainer --version
[2026-01-09 00:05:19] apptainer version 1.4.5-2.el9
[2026-01-09 00:05:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:05:21] c-5-4.aglt2.org
[2026-01-09 00:05:21] apptainer works
[2026-01-09 00:05:21] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:05:21] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:05:22] Starting ATLAS job with PandaID=6963076870
[2026-01-09 00:05:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:59:59]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:59:59] 2026-01-11 00:58:18,817 | INFO     | time since job start (157833s) is within the limit (174528.0s)
[2026-01-10 19:59:59] 2026-01-11 00:58:20,179 | INFO     | monitor loop #6734: job 0:6963076870 is in state 'finished'
[2026-01-10 19:59:59] 2026-01-11 00:58:20,180 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:59:59] 2026-01-11 00:58:20,824 | INFO     | time since job start (157835s) is within the limit (174528.0s)
[2026-01-10 19:59:59] 2026-01-11 00:58:22,685 | INFO     | monitor loop #6735: job 0:6963076870 is in state 'finished'
[2026-01-10 19:59:59] 2026-01-11 00:58:22,686 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:59:59] 2026-01-11 00:58:22,831 | INFO     | time since job start (157837s) is within the limit (174528.0s)
[2026-01-10 19:59:59] 2026-01-11 00:58:24,844 | INFO     | time since job start (157839s) is within the limit (174528.0s)
[2026-01-10 19:59:59] 2026-01-11 00:58:25,190 | INFO     | monitor loop #6736: job 0:6963076870 is in state 'finished'
[2026-01-10 19:59:59] 2026-01-11 00:58:25,192 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:59:59] 2026-01-11 00:58:26,854 | INFO     | time since job start (157841s) is within the limit (174528.0s)
[2026-01-10 19:59:59] 2026-01-11 00:58:27,697 | INFO     | monitor loop #6737: job 0:6963076870 is in state 'finished'
[2026-01-10 19:59:59] 2026-01-11 00:58:27,698 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:59:59] 2026-01-11 00:58:28,685 | INFO     | PID=3751838 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:59:59] 2026-01-11 00:58:28,685 | INFO     | .. there are 34 such processes running
[2026-01-10 19:59:59] 2026-01-11 00:58:29,686 | INFO     | time since job start (157844s) is within the limit (174528.0s)
[2026-01-10 19:59:59] 2026-01-11 00:58:29,958 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 19:59:59] 2026-01-11 00:58:29,971 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.156425
[2026-01-10 19:59:59] 2026-01-11 00:58:29,987 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963076870/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:59:59] 2026-01-11 00:58:29,988 | INFO     | extracted standard info from prmon json
[2026-01-10 19:59:59] 2026-01-11 00:58:29,988 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:59:59] 2026-01-11 00:58:29,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:59:59] 2026-01-11 00:58:30,036 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:59:59] 2026-01-11 00:58:30,040 | INFO     | sum of square deviations: 5337147997512.61
[2026-01-10 19:59:59] 2026-01-11 00:58:30,212 | INFO     | monitor loop #6738: job 0:6963076870 is in state 'finished'
[2026-01-10 19:59:59] 2026-01-11 00:58:30,226 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:59:59] 2026-01-11 00:58:30,377 | INFO     | sum of deviations: 19136273986497.17
[2026-01-10 19:59:59] 2026-01-11 00:58:30,377 | INFO     | mean x: 1768014301.8989155
[2026-01-10 19:59:59] 2026-01-11 00:58:30,377 | INFO     | mean y: 2828525.1692486443
[2026-01-10 19:59:59] 2026-01-11 00:58:30,377 | INFO     | intersect: -6336363513.153694
[2026-01-10 19:59:59] 2026-01-11 00:58:30,384 | INFO     | chi2: 28.022005302771348
[2026-01-10 19:59:59] 2026-01-11 00:58:30,387 | INFO     | sum of square deviations: 5306203659489.094
[2026-01-10 19:59:59] 2026-01-11 00:58:30,622 | INFO     | sum of deviations: 19946303801538.35
[2026-01-10 19:59:59] 2026-01-11 00:58:30,623 | INFO     | mean x: 1768014149.4093907
[2026-01-10 19:59:59] 2026-01-11 00:58:30,623 | INFO     | mean y: 2832517.224291812
[2026-01-10 19:59:59] 2026-01-11 00:58:30,623 | INFO     | intersect: -6643227380.320922
[2026-01-10 19:59:59] 2026-01-11 00:58:30,626 | INFO     | chi2: 25.182252693385824
[2026-01-10 19:59:59] 2026-01-11 00:58:30,626 | INFO     | current chi2=25.182252693385824 (change=10.134009249882897 %)
[2026-01-10 19:59:59] 2026-01-11 00:58:30,626 | INFO     | right removable region: 2576
[2026-01-10 19:59:59] 2026-01-11 00:58:30,629 | INFO     | sum of square deviations: 5306195156089.096
[2026-01-10 19:59:59] 2026-01-11 00:58:30,813 | INFO     | sum of deviations: 18053214311628.016
[2026-01-10 19:59:59] 2026-01-11 00:58:30,813 | INFO     | mean x: 1768014454.4093907
[2026-01-10 19:59:59] 2026-01-11 00:58:30,813 | INFO     | mean y: 2833861.477687233
[2026-01-10 19:59:59] 2026-01-11 00:58:30,814 | INFO     | intersect: -6012463901.342266
[2026-01-10 19:59:59] 2026-01-11 00:58:30,817 | INFO     | chi2: 23.158347795733768
[2026-01-10 19:59:59] 2026-01-11 00:58:30,817 | INFO     | current chi2=23.158347795733768 (change=17.356564794299604 %)
[2026-01-10 19:59:59] 2026-01-11 00:58:30,817 | INFO     | left removable region: 10
[2026-01-10 19:59:59] 2026-01-11 00:58:30,821 | INFO     | sum of square deviations: 5238531011651.061
[2026-01-10 19:59:59] 2026-01-11 00:58:31,013 | INFO     | sum of deviations: 18082638667319.574
[2026-01-10 19:59:59] 2026-01-11 00:58:31,014 | INFO     | mean x: 1768014423.9318004
[2026-01-10 19:59:59] 2026-01-11 00:58:31,014 | INFO     | mean y: 2843681.563133281
[2026-01-10 19:59:59] 2026-01-11 00:58:31,014 | INFO     | intersect: -6100082103.444602
[2026-01-10 19:59:59] 2026-01-11 00:58:31,019 | INFO     | chi2: 15.677409532832137
[2026-01-10 19:59:59] 2026-01-11 00:58:31,019 | INFO     | current memory leak: 3.45 B/s (using 2566 data points, chi2=15.68)
[2026-01-10 19:59:59] 2026-01-11 00:58:31,021 | INFO     | could have reported an average CPU frequency of 2600 MHz (88 samples)
[2026-01-10 19:59:59] 2026-01-11 00:58:31,022 | INFO     | ..............................
[2026-01-10 19:59:59] 2026-01-11 00:58:31,022 | INFO     | . Timing measurements:
[2026-01-10 19:59:59] 2026-01-11 00:58:31,022 | INFO     | . get job = 0 s
[2026-01-10 19:59:59] 2026-01-11 00:58:31,022 | INFO     | . initial setup = 17 s
[2026-01-10 19:59:59] 2026-01-11 00:58:31,022 | INFO     | . payload setup = 94 s
[2026-01-10 19:59:59] 2026-01-11 00:58:31,022 | INFO     | . stage-in = 1 s
[2026-01-10 19:59:59] 2026-01-11 00:58:31,022 | INFO     | . payload execution = 157554 s
[2026-01-10 19:59:59] 2026-01-11 00:58:31,022 | INFO     | . stage-out = 7 s
[2026-01-10 19:59:59] 2026-01-11 00:58:31,022 | INFO     | . log creation = 3 s
[2026-01-10 19:59:59] 2026-01-11 00:58:31,023 | INFO     | ..............................
[2026-01-10 19:59:59] 2026-01-11 00:58:31,132 | INFO     | 
[2026-01-10 19:59:59] 2026-01-11 00:58:31,132 | INFO     | job summary report
[2026-01-10 19:59:59] 2026-01-11 00:58:31,132 | INFO     | --------------------------------------------------
[2026-01-10 19:59:59] 2026-01-11 00:58:31,132 | INFO     | PanDA job id: 6963076870
[2026-01-10 19:59:59] 2026-01-11 00:58:31,132 | INFO     | task id: 47962010
[2026-01-10 19:59:59] 2026-01-11 00:58:31,132 | INFO     | errors: (none)
[2026-01-10 19:59:59] 2026-01-11 00:58:31,133 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:59:59] 2026-01-11 00:58:31,133 | INFO     | pilot state: finished 
[2026-01-10 19:59:59] 2026-01-11 00:58:31,133 | INFO     | transexitcode: 0
[2026-01-10 19:59:59] 2026-01-11 00:58:31,133 | INFO     | exeerrorcode: 0
[2026-01-10 19:59:59] 2026-01-11 00:58:31,133 | INFO     | exeerrordiag: 
[2026-01-10 19:59:59] 2026-01-11 00:58:31,133 | INFO     | exitcode: 0
[2026-01-10 19:59:59] 2026-01-11 00:58:31,133 | INFO     | exitmsg: OK
[2026-01-10 19:59:59] 2026-01-11 00:58:31,133 | INFO     | cpuconsumptiontime: 174387 s
[2026-01-10 19:59:59] 2026-01-11 00:58:31,133 | INFO     | nevents: 450
[2026-01-10 19:59:59] 2026-01-11 00:58:31,133 | INFO     | neventsw: 0
[2026-01-10 19:59:59] 2026-01-11 00:58:31,133 | INFO     | pid: 3787915
[2026-01-10 19:59:59] 2026-01-11 00:58:31,134 | INFO     | pgrp: 3787915
[2026-01-10 19:59:59] 2026-01-11 00:58:31,134 | INFO     | corecount: 8
[2026-01-10 19:59:59] 2026-01-11 00:58:31,134 | INFO     | event service: False
[2026-01-10 19:59:59] 2026-01-11 00:58:31,134 | INFO     | sizes: {0: 2283791, 1: 2284392, 2: 2284504, 5: 2284504, 6: 2284560, 8: 2284887, 21: 2284915, 34: 2284943, 46: 2284971, 60: 2284999, 72: 2285027, 84: 2285335, 92: 2
[2026-01-10 19:59:59] 2026-01-11 00:58:31,134 | INFO     | --------------------------------------------------
[2026-01-10 19:59:59] 2026-01-11 00:58:31,134 | INFO     | 
[2026-01-10 19:59:59] 2026-01-11 00:58:31,134 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-10 19:59:59] 2026-01-11 00:58:31,267 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,267 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,267 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,267 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,268 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,268 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,268 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,268 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,268 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,268 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,268 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,268 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,269 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,269 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,269 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,269 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,269 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:59:59] 2026-01-11 00:58:31,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,269 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:59:59] 2026-01-11 00:58:31,270 | INFO     | job 6963076870 has completed (purged errors)
[2026-01-10 19:59:59] 2026-01-11 00:58:31,270 | INFO     | overall cleanup function is called
[2026-01-10 19:59:59] 2026-01-11 00:58:32,322 | INFO     | --- collectZombieJob: --- 10, [3787915]
[2026-01-10 19:59:59] 2026-01-11 00:58:32,323 | INFO     | zombie collector waiting for pid 3787915
[2026-01-10 19:59:59] 2026-01-11 00:58:32,323 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:59:59] 2026-01-11 00:58:32,323 | INFO     | collected zombie processes
[2026-01-10 19:59:59] 2026-01-11 00:58:32,323 | INFO     | will attempt to kill all subprocesses of pid=3787915
[2026-01-10 19:59:59] 2026-01-11 00:58:32,893 | INFO     | process IDs to be killed: [3787915] (in reverse order)
[2026-01-10 19:59:59] 2026-01-11 00:58:33,059 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:59:59] 2026-01-11 00:58:33,059 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:59:59] 2026-01-11 00:58:33,089 | INFO     | did not find any defunct processes belonging to 3787915
[2026-01-10 19:59:59] 2026-01-11 00:58:33,113 | INFO     | did not find any defunct processes belonging to 3787915
[2026-01-10 19:59:59] 2026-01-11 00:58:33,118 | INFO     | ready for new job
[2026-01-10 19:59:59] 2026-01-11 00:58:33,118 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:59:59] 2026-01-11 00:58:33,124 | INFO     | ***************************************
[2026-01-10 19:59:59] 2026-01-11 00:58:33,124 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:59:59] 2026-01-11 00:58:33,132 | INFO     | ***************************************
[2026-01-10 19:59:59] 2026-01-11 00:58:33,133 | INFO     | 
[2026-01-10 19:59:59] 2026-01-11 00:58:33,134 | INFO     | architecture information:
[2026-01-10 19:59:59] 2026-01-11 00:58:33,139 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:59:59] 2026-01-11 00:58:33,163 | INFO     | cat /etc/os-release:
[2026-01-10 19:59:59] NAME="CentOS Linux"
[2026-01-10 19:59:59] VERSION="7 (Core)"
[2026-01-10 19:59:59] ID="centos"
[2026-01-10 19:59:59] ID_LIKE="rhel fedora"
[2026-01-10 19:59:59] VERSION_ID="7"
[2026-01-10 19:59:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:59:59] ANSI_COLOR="0;31"
[2026-01-10 19:59:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:59:59] HOME_URL="https://www.centos.org/"
[2026-01-10 19:59:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:59:59] 
[2026-01-10 19:59:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:59:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:59:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:59:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:59:59] 
[2026-01-10 19:59:59] 2026-01-11 00:58:33,164 | INFO     | ***************************************
[2026-01-10 19:59:59] 2026-01-11 00:58:33,674 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-10 19:59:59] 2026-01-11 00:58:33,721 | INFO     | sufficient remaining disk space (72912732160 B)
[2026-01-10 19:59:59] 2026-01-11 00:58:33,722 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:59:59] 2026-01-11 00:58:33,722 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:59:59] 2026-01-11 00:58:33,722 | INFO     | update_server=False
[2026-01-10 19:59:59] 2026-01-11 00:58:33,722 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:59:59] 2026-01-11 00:58:33,722 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:59:59] 2026-01-11 00:58:33,730 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:59:59] 2026-01-11 00:58:33,743 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:59:59] 2026-01-11 00:58:33,744 | INFO     | aborting loop
[2026-01-10 19:59:59] 2026-01-11 00:58:34,552 | INFO     | all payload control threads have been joined
[2026-01-10 19:59:59] 2026-01-11 00:58:34,605 | INFO     | all data control threads have been joined
[2026-01-10 19:59:59] 2026-01-11 00:58:34,728 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:59:59] 2026-01-11 00:58:34,756 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:59:59] 2026-01-11 00:58:34,977 | INFO     | [job] validate thread has finished
[2026-01-10 19:59:59] 2026-01-11 00:58:35,220 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:59:59] 2026-01-11 00:58:35,358 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:59:59] 2026-01-11 00:58:35,358 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:59:59] 2026-01-11 00:58:35,376 | INFO     | all job control threads have been joined
[2026-01-10 19:59:59] 2026-01-11 00:58:35,560 | INFO     | [payload] control thread has finished
[2026-01-10 19:59:59] 2026-01-11 00:58:35,612 | INFO     | [data] control thread has finished
[2026-01-10 19:59:59] 2026-01-11 00:58:35,620 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:59:59] 2026-01-11 00:58:35,637 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:59:59] 2026-01-11 00:58:35,668 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:59:59] 2026-01-11 00:58:35,715 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:59:59] 2026-01-11 00:58:35,734 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:59:59] 2026-01-11 00:58:36,146 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:59:59] 2026-01-11 00:58:36,392 | INFO     | [job] control thread has finished
[2026-01-10 19:59:59] 2026-01-11 00:58:37,152 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:59:59] 2026-01-11 00:58:37,739 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:59:59] 2026-01-11 00:59:03,660 | INFO     | PID=3751838 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:59:59] 2026-01-11 00:59:03,661 | INFO     | .. there are 34 such processes running
[2026-01-10 19:59:59] 2026-01-11 00:59:03,662 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:59:59] 2026-01-11 00:59:03,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:59:59] 2026-01-11 00:59:03,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:59:59] 2026-01-11 00:59:32,305 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:59:59] 2026-01-11 00:59:33,328 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139720899577664)>', '<ExcThread(monitor, started 139720185083648)>']
[2026-01-10 19:59:59] 2026-01-11 00:59:33,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:59:59] 2026-01-11 00:59:33,853 | INFO     | [monitor] control thread has ended
[2026-01-10 19:59:59] 2026-01-11 00:59:38,354 | INFO     | all workflow threads have been joined
[2026-01-10 19:59:59] 2026-01-11 00:59:38,355 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:59:59] 2026-01-11 00:59:38,355 | INFO     | traces error code: 0
[2026-01-10 19:59:59] 2026-01-11 00:59:38,355 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:59:59] 2026-01-11 00:59:38,824 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:59:59] 2026-01-11 00:59:38,852 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:59:59] 2026-01-11 00:59:38,907 [wrapper] pilotpid: 3751838
[2026-01-10 19:59:59] 2026-01-11 00:59:38,954 [wrapper] Pilot exit status: 0
[2026-01-10 19:59:59] 2026-01-11 00:59:39,094 [wrapper] pandaids: 6963076870
[2026-01-10 19:59:59] 2026-01-11 00:59:39,563 [wrapper] cleanup supervisor_pilot  746916 3751839
[2026-01-10 19:59:59] 2026-01-11 00:59:39,566 [wrapper] Test setup, not cleaning
[2026-01-10 19:59:59] 2026-01-11 00:59:39,568 [wrapper] apfmon messages muted
[2026-01-10 19:59:59] 2026-01-11 00:59:39,571 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:59:59] 2026-01-11 00:59:39,573 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:59:59]  *** Error codes and diagnostics ***
[2026-01-10 19:59:59]     "exeErrorCode": 0,
[2026-01-10 19:59:59]     "exeErrorDiag": "",
[2026-01-10 19:59:59]     "pilotErrorCode": 0,
[2026-01-10 19:59:59]     "pilotErrorDiag": "",
[2026-01-10 19:59:59]  *** Listing of results directory ***
[2026-01-10 19:59:59] total 810044
[2026-01-10 19:59:59] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-10 19:59:59] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:56 queuedata.json
[2026-01-10 19:59:59] -rwx------. 1 boincer umatlas     36322 Jan  8 06:56 runpilot2-wrapper.sh
[2026-01-10 19:59:59] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:59:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:05 run_atlas
[2026-01-10 19:59:59] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:05 job.xml
[2026-01-10 19:59:59] -rw-r--r--. 2 boincer umatlas 392786761 Jan  9 00:05 EVNT.47962006._000039.pool.root.1
[2026-01-10 19:59:59] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:05 start_atlas.sh
[2026-01-10 19:59:59] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:05 shared
[2026-01-10 19:59:59] -rw-r--r--. 2 boincer umatlas    592613 Jan  9 00:05 input.tar.gz
[2026-01-10 19:59:59] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:05 boinc_lockfile
[2026-01-10 19:59:59] -rw-r--r--. 1 boincer umatlas      2890 Jan  9 00:05 pandaJob.out
[2026-01-10 19:59:59] -rw-------. 1 boincer umatlas        57 Jan  9 00:05 setup.sh.local
[2026-01-10 19:59:59] -rw-------. 1 boincer umatlas    989771 Jan  9 00:07 agis_schedconf.cvmfs.json
[2026-01-10 19:59:59] drwx------. 5 boincer umatlas      4096 Jan  9 00:07 pilot3
[2026-01-10 19:59:59] -rw-r--r--. 1 boincer umatlas       533 Jan 10 19:16 boinc_task_state.xml
[2026-01-10 19:59:59] -rw-r--r--. 1 boincer umatlas      6659 Jan 10 19:54 init_data.xml
[2026-01-10 19:59:59] -rw-------. 1 boincer umatlas 395088169 Jan 10 19:57 HITS.47962010._000199.pool.root.1
[2026-01-10 19:59:59] -rw-------. 1 boincer umatlas      1068 Jan 10 19:57 memory_monitor_summary.json
[2026-01-10 19:59:59] -rw-------. 1 boincer umatlas   1516240 Jan 10 19:58 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:59:59] -rw-------. 1 boincer umatlas   2833493 Jan 10 19:58 log.47962010._000199.job.log.tgz.1
[2026-01-10 19:59:59] -rw-------. 1 boincer umatlas      8637 Jan 10 19:58 heartbeat.json
[2026-01-10 19:59:59] -rw-------. 1 boincer umatlas        95 Jan 10 19:59 pilot_heartbeat.json
[2026-01-10 19:59:59] -rw-------. 1 boincer umatlas      4824 Jan 10 19:59 pilotlog.txt
[2026-01-10 19:59:59] -rw-------. 1 boincer umatlas  16009175 Jan 10 19:59 log.47962010._000199.job.log.1
[2026-01-10 19:59:59] -rw-------. 1 boincer umatlas       353 Jan 10 19:59 output.list
[2026-01-10 19:59:59] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:59 runtime_log
[2026-01-10 19:59:59] -rw-------. 1 boincer umatlas  18862080 Jan 10 19:59 result.tar.gz
[2026-01-10 19:59:59] -rw-------. 1 boincer umatlas       665 Jan 10 19:59 xuhMDmAo3x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTTkKDm6eV9zm.diag
[2026-01-10 19:59:59] -rw-r--r--. 1 boincer umatlas      9329 Jan 10 19:59 runtime_log.err
[2026-01-10 19:59:59] -rw-r--r--. 1 boincer umatlas        29 Jan 10 19:59 wrapper_checkpoint.txt
[2026-01-10 19:59:59] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:59 boinc_mmap_file
[2026-01-10 19:59:59] -rw-r--r--. 1 boincer umatlas     21793 Jan 10 19:59 stderr.txt
[2026-01-10 19:59:59] HITS file was successfully produced:
[2026-01-10 19:59:59] -rw-------. 1 boincer umatlas 395088169 Jan 10 19:57 shared/HITS.pool.root.1
[2026-01-10 19:59:59]  *** Contents of shared directory: ***
[2026-01-10 19:59:59] total 788440
[2026-01-10 19:59:59] -rw-r--r--. 2 boincer umatlas 392786761 Jan  9 00:05 ATLAS.root_0
[2026-01-10 19:59:59] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:05 start_atlas.sh
[2026-01-10 19:59:59] -rw-r--r--. 2 boincer umatlas    592613 Jan  9 00:05 input.tar.gz
[2026-01-10 19:59:59] -rw-------. 1 boincer umatlas 395088169 Jan 10 19:57 HITS.pool.root.1
[2026-01-10 19:59:59] -rw-------. 1 boincer umatlas  18862080 Jan 10 19:59 result.tar.gz
20:00:01 (3735777): run_atlas exited; CPU time 178907.805298
20:00:01 (3735777): called boinc_finish(0)

</stderr_txt>
]]>

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