Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:04 (4050040): wrapper (7.7.26015): starting
00:11:04 (4050040): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:11:04] Arguments: --nthreads 8
[2026-01-09 00:11:04] Threads: 8
[2026-01-09 00:11:04] Checking for CVMFS
[2026-01-09 00:11:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:11:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:11:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:11:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:11:07] 2.13.3.0 9955 92928 131140 154932 3 193 30653508 32935937 28087 16776704 0 433542316 99.716 318425964 33195 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:11:07] CVMFS is ok
[2026-01-09 00:11:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:11:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:11:07] Further information can be found at the LHC@home message board.
[2026-01-09 00:11:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:11:07] Checking for apptainer binary...
[2026-01-09 00:11:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:11:07] Running /usr/bin/apptainer --version
[2026-01-09 00:11:08] apptainer version 1.4.5-2.el9
[2026-01-09 00:11:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:11:09] c-5-1.aglt2.org
[2026-01-09 00:11:09] apptainer works
[2026-01-09 00:11:09] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:11:09] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:11:09] Starting ATLAS job with PandaID=6963147778
[2026-01-09 00:11:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:16:33]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:16:33] 2026-01-09 23:01:46,358 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 20:16:33] 2026-01-09 23:01:46,391 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.033375
[2026-01-09 20:16:33] 2026-01-09 23:01:46,402 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963147778/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:16:33] 2026-01-09 23:01:46,403 | INFO     | extracted standard info from prmon json
[2026-01-09 20:16:33] 2026-01-09 23:01:46,403 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:16:33] 2026-01-09 23:01:46,403 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:16:33] 2026-01-09 23:01:46,404 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:16:33] 2026-01-09 23:01:46,404 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:16:33] 2026-01-09 23:01:46,430 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:16:33] 2026-01-09 23:01:46,431 | INFO     | sum of square deviations: 356887452874.6414
[2026-01-09 20:16:33] 2026-01-09 23:01:46,493 | INFO     | sum of deviations: 884635151446.5408
[2026-01-09 20:16:33] 2026-01-09 23:01:46,494 | INFO     | mean x: 1767967666.778626
[2026-01-09 20:16:33] 2026-01-09 23:01:46,494 | INFO     | mean y: 2479584.7652671756
[2026-01-09 20:16:33] 2026-01-09 23:01:46,494 | INFO     | intersect: -4379872140.002884
[2026-01-09 20:16:33] 2026-01-09 23:01:46,496 | INFO     | chi2: 5.572583605543292
[2026-01-09 20:16:33] 2026-01-09 23:01:46,497 | INFO     | sum of square deviations: 351803582571.5622
[2026-01-09 20:16:33] 2026-01-09 23:01:46,543 | INFO     | sum of deviations: 941800227645.4148
[2026-01-09 20:16:33] 2026-01-09 23:01:46,543 | INFO     | mean x: 1767967514.2828379
[2026-01-09 20:16:33] 2026-01-09 23:01:46,543 | INFO     | mean y: 2481292.0901246406
[2026-01-09 20:16:33] 2026-01-09 23:01:46,544 | INFO     | intersect: -4730478489.757957
[2026-01-09 20:16:33] 2026-01-09 23:01:46,545 | INFO     | chi2: 4.890197591037007
[2026-01-09 20:16:33] 2026-01-09 23:01:46,545 | INFO     | current chi2=4.890197591037007 (change=12.245415462721567 %)
[2026-01-09 20:16:33] 2026-01-09 23:01:46,545 | INFO     | right removable region: 1042
[2026-01-09 20:16:33] 2026-01-09 23:01:46,547 | INFO     | sum of square deviations: 351802637056.13464
[2026-01-09 20:16:33] 2026-01-09 23:01:46,816 | INFO     | sum of deviations: 558097916501.9266
[2026-01-09 20:16:33] 2026-01-09 23:01:46,816 | INFO     | mean x: 1767967819.2885907
[2026-01-09 20:16:33] 2026-01-09 23:01:46,817 | INFO     | mean y: 2489374.8341323105
[2026-01-09 20:16:33] 2026-01-09 23:01:46,817 | INFO     | intersect: -2802205793.582063
[2026-01-09 20:16:33] 2026-01-09 23:01:46,818 | INFO     | chi2: 2.0609874166165296
[2026-01-09 20:16:33] 2026-01-09 23:01:46,818 | INFO     | current chi2=2.0609874166165296 (change=63.01558554336671 %)
[2026-01-09 20:16:33] 2026-01-09 23:01:46,854 | INFO     | sum of square deviations: 346766525142.7039
[2026-01-09 20:16:33] 2026-01-09 23:01:47,428 | INFO     | sum of deviations: 399717830104.0172
[2026-01-09 20:16:33] 2026-01-09 23:01:47,428 | INFO     | mean x: 1767967971.795761
[2026-01-09 20:16:33] 2026-01-09 23:01:47,429 | INFO     | mean y: 2494166.731213873
[2026-01-09 20:16:33] 2026-01-09 23:01:47,429 | INFO     | intersect: -2035442802.7867649
[2026-01-09 20:16:33] 2026-01-09 23:01:47,430 | INFO     | chi2: 1.2010384537011753
[2026-01-09 20:16:33] 2026-01-09 23:01:47,430 | INFO     | current chi2=1.2010384537011753 (change=41.725095261722196 %)
[2026-01-09 20:16:33] 2026-01-09 23:01:47,432 | INFO     | sum of square deviations: 341778819111.369
[2026-01-09 20:16:33] 2026-01-09 23:01:47,905 | INFO     | sum of deviations: 308203810004.87634
[2026-01-09 20:16:33] 2026-01-09 23:01:47,906 | INFO     | mean x: 1767968124.301065
[2026-01-09 20:16:33] 2026-01-09 23:01:47,906 | INFO     | mean y: 2496964.476282672
[2026-01-09 20:16:33] 2026-01-09 23:01:47,906 | INFO     | intersect: -1591792913.677953
[2026-01-09 20:16:33] 2026-01-09 23:01:47,908 | INFO     | chi2: 0.9524841033426512
[2026-01-09 20:16:33] 2026-01-09 23:01:47,908 | INFO     | current chi2=0.9524841033426512 (change=20.694953570601143 %)
[2026-01-09 20:16:33] 2026-01-09 23:01:47,908 | INFO     | left removable region: 30
[2026-01-09 20:16:33] 2026-01-09 23:01:47,909 | INFO     | sum of square deviations: 321355085632.65924
[2026-01-09 20:16:33] 2026-01-09 23:01:48,286 | INFO     | sum of deviations: 249890313472.68192
[2026-01-09 20:16:33] 2026-01-09 23:01:48,287 | INFO     | mean x: 1767968398.7954545
[2026-01-09 20:16:33] 2026-01-09 23:01:48,287 | INFO     | mean y: 2502435.669960474
[2026-01-09 20:16:33] 2026-01-09 23:01:48,287 | INFO     | intersect: -1372295092.4756212
[2026-01-09 20:16:33] 2026-01-09 23:01:48,467 | INFO     | chi2: 0.11709230570268826
[2026-01-09 20:16:33] 2026-01-09 23:01:48,467 | INFO     | current memory leak: 0.78 B/s (using 1012 data points, chi2=0.12)
[2026-01-09 20:16:33] 2026-01-09 23:01:48,513 | INFO     | could have reported an average CPU frequency of 2600 MHz (38 samples)
[2026-01-09 20:16:33] 2026-01-09 23:01:48,513 | INFO     | ..............................
[2026-01-09 20:16:33] 2026-01-09 23:01:48,513 | INFO     | . Timing measurements:
[2026-01-09 20:16:33] 2026-01-09 23:01:48,513 | INFO     | . get job = 1 s
[2026-01-09 20:16:33] 2026-01-09 23:01:48,513 | INFO     | . initial setup = 6 s
[2026-01-09 20:16:33] 2026-01-09 23:01:48,514 | INFO     | . payload setup = 57 s
[2026-01-09 20:16:33] 2026-01-09 23:01:48,514 | INFO     | . stage-in = 0 s
[2026-01-09 20:16:33] 2026-01-09 23:01:48,514 | INFO     | . payload execution = 63953 s
[2026-01-09 20:16:33] 2026-01-09 23:01:48,514 | INFO     | . stage-out = 10 s
[2026-01-09 20:16:33] 2026-01-09 23:01:48,514 | INFO     | . log creation = 5 s
[2026-01-09 20:16:33] 2026-01-09 23:01:48,514 | INFO     | ..............................
[2026-01-09 20:16:33] 2026-01-09 23:01:50,029 | INFO     | 
[2026-01-09 20:16:33] 2026-01-09 23:01:50,029 | INFO     | job summary report
[2026-01-09 20:16:33] 2026-01-09 23:01:50,029 | INFO     | --------------------------------------------------
[2026-01-09 20:16:33] 2026-01-09 23:01:50,029 | INFO     | PanDA job id: 6963147778
[2026-01-09 20:16:33] 2026-01-09 23:01:50,029 | INFO     | task id: 47898826
[2026-01-09 20:16:33] 2026-01-09 23:01:50,029 | INFO     | errors: (none)
[2026-01-09 20:16:33] 2026-01-09 23:01:50,030 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:16:33] 2026-01-09 23:01:50,030 | INFO     | pilot state: finished 
[2026-01-09 20:16:33] 2026-01-09 23:01:50,030 | INFO     | transexitcode: 0
[2026-01-09 20:16:33] 2026-01-09 23:01:50,030 | INFO     | exeerrorcode: 0
[2026-01-09 20:16:33] 2026-01-09 23:01:50,030 | INFO     | exeerrordiag: 
[2026-01-09 20:16:33] 2026-01-09 23:01:50,030 | INFO     | exitcode: 0
[2026-01-09 20:16:33] 2026-01-09 23:01:50,030 | INFO     | exitmsg: OK
[2026-01-09 20:16:33] 2026-01-09 23:01:50,030 | INFO     | cpuconsumptiontime: 71655 s
[2026-01-09 20:16:33] 2026-01-09 23:01:50,030 | INFO     | nevents: 400
[2026-01-09 20:16:33] 2026-01-09 23:01:50,030 | INFO     | neventsw: 0
[2026-01-09 20:16:33] 2026-01-09 23:01:50,031 | INFO     | pid: 4097021
[2026-01-09 20:16:33] 2026-01-09 23:01:50,031 | INFO     | pgrp: 4097021
[2026-01-09 20:16:33] 2026-01-09 23:01:50,031 | INFO     | corecount: 8
[2026-01-09 20:16:33] 2026-01-09 23:01:50,031 | INFO     | event service: False
[2026-01-09 20:16:33] 2026-01-09 23:01:50,031 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2283856, 3: 2284055, 14: 2284055, 25: 2284083, 27: 2284501, 37: 2284529, 64016: 2335217, 64029: 2344215, 64030: 2344271, 64093: 
[2026-01-09 20:16:33] 2026-01-09 23:01:50,031 | INFO     | --------------------------------------------------
[2026-01-09 20:16:33] 2026-01-09 23:01:50,031 | INFO     | 
[2026-01-09 20:16:33] 2026-01-09 23:01:50,031 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 20:16:33] 2026-01-09 23:01:50,227 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,227 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,227 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,227 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,228 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,228 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,228 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,228 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,228 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,228 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,228 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,228 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,228 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,229 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,229 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:16:33] 2026-01-09 23:01:50,229 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,229 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:16:33] 2026-01-09 23:01:50,229 | INFO     | job 6963147778 has completed (purged errors)
[2026-01-09 20:16:33] 2026-01-09 23:01:50,230 | INFO     | overall cleanup function is called
[2026-01-09 20:16:33] 2026-01-09 23:01:51,445 | INFO     | --- collectZombieJob: --- 10, [4097021]
[2026-01-09 20:16:33] 2026-01-09 23:01:51,445 | INFO     | zombie collector waiting for pid 4097021
[2026-01-09 20:16:33] 2026-01-09 23:01:51,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:16:33] 2026-01-09 23:01:51,445 | INFO     | collected zombie processes
[2026-01-09 20:16:33] 2026-01-09 23:01:51,445 | INFO     | will attempt to kill all subprocesses of pid=4097021
[2026-01-09 20:16:33] 2026-01-09 23:01:51,669 | INFO     | PID=4064679 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:16:33] 2026-01-09 23:01:51,669 | INFO     | .. there are 41 such processes running
[2026-01-09 20:16:33] 2026-01-09 23:01:54,044 | INFO     | process IDs to be killed: [4097021] (in reverse order)
[2026-01-09 20:16:33] 2026-01-09 23:01:55,056 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:16:33] 2026-01-09 23:01:55,056 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:16:33] 2026-01-09 23:01:55,183 | INFO     | did not find any defunct processes belonging to 4097021
[2026-01-09 20:16:33] 2026-01-09 23:01:55,324 | INFO     | did not find any defunct processes belonging to 4097021
[2026-01-09 20:16:33] 2026-01-09 23:01:55,325 | INFO     | ready for new job
[2026-01-09 20:16:33] 2026-01-09 23:01:55,325 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:16:33] 2026-01-09 23:01:55,353 | INFO     | ***************************************
[2026-01-09 20:16:33] 2026-01-09 23:01:55,354 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:16:33] 2026-01-09 23:01:55,354 | INFO     | ***************************************
[2026-01-09 20:16:33] 2026-01-09 23:01:55,354 | INFO     | 
[2026-01-09 20:16:33] 2026-01-09 23:01:55,392 | INFO     | architecture information:
[2026-01-09 20:16:33] 2026-01-09 23:01:55,413 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:16:33] 2026-01-09 23:01:55,645 | INFO     | cat /etc/os-release:
[2026-01-09 20:16:33] NAME="CentOS Linux"
[2026-01-09 20:16:33] VERSION="7 (Core)"
[2026-01-09 20:16:33] ID="centos"
[2026-01-09 20:16:33] ID_LIKE="rhel fedora"
[2026-01-09 20:16:33] VERSION_ID="7"
[2026-01-09 20:16:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:16:33] ANSI_COLOR="0;31"
[2026-01-09 20:16:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:16:33] HOME_URL="https://www.centos.org/"
[2026-01-09 20:16:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:16:33] 
[2026-01-09 20:16:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:16:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:16:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:16:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:16:33] 
[2026-01-09 20:16:33] 2026-01-09 23:01:55,645 | INFO     | ***************************************
[2026-01-09 20:16:33] 2026-01-09 23:01:56,149 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 20:16:33] 2026-01-09 23:01:56,361 | INFO     | sufficient remaining disk space (75135713280 B)
[2026-01-09 20:16:33] 2026-01-09 23:01:56,362 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:16:33] 2026-01-09 23:01:56,362 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:16:33] 2026-01-09 23:01:56,362 | INFO     | update_server=False
[2026-01-09 20:16:33] 2026-01-09 23:01:56,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:16:33] 2026-01-09 23:01:56,717 | INFO     | all payload control threads have been joined
[2026-01-09 20:16:33] 2026-01-09 23:01:56,951 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:16:33] 2026-01-09 23:01:57,197 | INFO     | all job control threads have been joined
[2026-01-09 20:16:33] 2026-01-09 23:01:57,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:16:33] 2026-01-09 23:01:57,210 | INFO     | aborting loop
[2026-01-09 20:16:33] 2026-01-09 23:01:57,319 | INFO     | all data control threads have been joined
[2026-01-09 20:16:33] 2026-01-09 23:01:57,368 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:16:33] 2026-01-09 23:01:57,590 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:16:33] 2026-01-09 23:01:57,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:16:33] 2026-01-09 23:01:57,723 | INFO     | [payload] control thread has finished
[2026-01-09 20:16:33] 2026-01-09 23:01:58,071 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:16:33] 2026-01-09 23:01:58,203 | INFO     | [job] control thread has finished
[2026-01-09 20:16:33] 2026-01-09 23:01:58,216 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:16:33] 2026-01-09 23:01:58,236 | INFO     | [job] validate thread has finished
[2026-01-09 20:16:33] 2026-01-09 23:01:58,325 | INFO     | [data] control thread has finished
[2026-01-09 20:16:33] 2026-01-09 23:01:58,527 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:16:33] 2026-01-09 23:01:58,770 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:16:33] 2026-01-09 23:01:58,795 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:16:33] 2026-01-09 23:01:58,805 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:16:33] 2026-01-09 23:01:58,816 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:16:33] 2026-01-09 23:01:59,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:16:33] 2026-01-09 23:01:59,715 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:16:33] 2026-01-09 23:02:00,103 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:16:33] 2026-01-09 23:02:00,960 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:16:33] 2026-01-09 23:02:27,797 | INFO     | PID=4064679 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:16:33] 2026-01-09 23:02:27,797 | INFO     | .. there are 41 such processes running
[2026-01-09 20:16:33] 2026-01-09 23:02:27,801 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:16:33] 2026-01-09 23:02:27,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:16:33] 2026-01-09 23:02:27,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:16:33] 2026-01-09 23:02:41,251 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:16:33] 2026-01-09 23:02:42,335 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140108133406528)>', '<ExcThread(monitor, started 140107646486272)>']
[2026-01-09 20:16:33] 2026-01-09 23:02:42,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:16:33] 2026-01-09 23:02:42,892 | INFO     | [monitor] control thread has ended
[2026-01-09 20:16:33] 2026-01-09 23:02:47,361 | INFO     | all workflow threads have been joined
[2026-01-09 20:16:33] 2026-01-09 23:02:47,361 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:16:33] 2026-01-09 23:02:47,361 | INFO     | traces error code: 0
[2026-01-09 20:16:33] 2026-01-09 23:02:47,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:16:33] 2026-01-09 23:02:47,576 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:16:33] 2026-01-09 23:02:47,608 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:16:33] 2026-01-09 23:02:47,621 [wrapper] pilotpid: 4064679
[2026-01-09 20:16:33] 2026-01-09 23:02:47,666 [wrapper] Pilot exit status: 0
[2026-01-09 20:16:33] 2026-01-09 23:02:48,147 [wrapper] pandaids: 6963147778
[2026-01-09 20:16:33] 2026-01-09 23:02:48,956 [wrapper] cleanup supervisor_pilot  889774 4064680
[2026-01-09 20:16:33] 2026-01-09 23:02:49,042 [wrapper] Test setup, not cleaning
[2026-01-09 20:16:33] 2026-01-09 23:02:49,085 [wrapper] apfmon messages muted
[2026-01-09 20:16:33] 2026-01-09 23:02:49,092 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:16:33] 2026-01-09 23:02:49,146 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:16:33]  *** Error codes and diagnostics ***
[2026-01-09 20:16:33]     "exeErrorCode": 0,
[2026-01-09 20:16:33]     "exeErrorDiag": "",
[2026-01-09 20:16:33]     "pilotErrorCode": 0,
[2026-01-09 20:16:33]     "pilotErrorDiag": "",
[2026-01-09 20:16:33]  *** Listing of results directory ***
[2026-01-09 20:16:33] total 456600
[2026-01-09 20:16:33] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 20:16:33] -rwx------. 1 boincer umatlas     36322 Jan  8 11:05 runpilot2-wrapper.sh
[2026-01-09 20:16:33] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:07 queuedata.json
[2026-01-09 20:16:33] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:16:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:11 run_atlas
[2026-01-09 20:16:33] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:11 job.xml
[2026-01-09 20:16:33] -rw-r--r--. 2 boincer umatlas 228051459 Jan  9 00:11 EVNT.47898824._001083.pool.root.1
[2026-01-09 20:16:33] -rw-r--r--. 2 boincer umatlas    592403 Jan  9 00:11 input.tar.gz
[2026-01-09 20:16:33] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:11 start_atlas.sh
[2026-01-09 20:16:33] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:11 shared
[2026-01-09 20:16:33] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:11 boinc_lockfile
[2026-01-09 20:16:33] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 00:11 pandaJob.out
[2026-01-09 20:16:33] -rw-------. 1 boincer umatlas        57 Jan  9 00:11 setup.sh.local
[2026-01-09 20:16:33] -rw-------. 1 boincer umatlas    989771 Jan  9 00:12 agis_schedconf.cvmfs.json
[2026-01-09 20:16:33] drwx------. 5 boincer umatlas      4096 Jan  9 00:12 pilot3
[2026-01-09 20:16:33] -rw-------. 1 boincer umatlas 220764560 Jan  9 17:58 HITS.47898826._027896.pool.root.1
[2026-01-09 20:16:33] -rw-r--r--. 1 boincer umatlas       530 Jan  9 17:58 boinc_task_state.xml
[2026-01-09 20:16:33] -rw-------. 1 boincer umatlas      1068 Jan  9 18:00 memory_monitor_summary.json
[2026-01-09 20:16:33] -rw-------. 1 boincer umatlas   1516240 Jan  9 18:00 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:16:33] -rw-------. 1 boincer umatlas    989787 Jan  9 18:00 log.47898826._027896.job.log.tgz.1
[2026-01-09 20:16:33] -rw-------. 1 boincer umatlas      7839 Jan  9 18:01 heartbeat.json
[2026-01-09 20:16:33] -rw-------. 1 boincer umatlas        95 Jan  9 18:02 pilot_heartbeat.json
[2026-01-09 20:16:33] -rw-------. 1 boincer umatlas      4824 Jan  9 18:02 pilotlog.txt
[2026-01-09 20:16:33] -rw-------. 1 boincer umatlas   6426088 Jan  9 18:02 log.47898826._027896.job.log.1
[2026-01-09 20:16:33] -rw-------. 1 boincer umatlas       357 Jan  9 18:02 output.list
[2026-01-09 20:16:33] -rw-r--r--. 1 boincer umatlas       620 Jan  9 18:02 runtime_log
[2026-01-09 20:16:33] -rw-------. 1 boincer umatlas   7434240 Jan  9 18:02 result.tar.gz
[2026-01-09 20:16:33] -rw-r--r--. 1 boincer umatlas      9328 Jan  9 18:02 runtime_log.err
[2026-01-09 20:16:33] -rw-------. 1 boincer umatlas       659 Jan  9 18:02 3JBNDmDh7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmp0kKDmQxtPNo.diag
[2026-01-09 20:16:33] -rw-r--r--. 1 boincer umatlas      6658 Jan  9 20:10 init_data.xml
[2026-01-09 20:16:33] -rw-r--r--. 1 boincer umatlas        27 Jan  9 20:16 wrapper_checkpoint.txt
[2026-01-09 20:16:33] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 20:16 boinc_mmap_file
[2026-01-09 20:16:33] -rw-r--r--. 1 boincer umatlas     21298 Jan  9 20:16 stderr.txt
[2026-01-09 20:16:33] HITS file was successfully produced:
[2026-01-09 20:16:33] -rw-------. 1 boincer umatlas 220764560 Jan  9 17:58 shared/HITS.pool.root.1
[2026-01-09 20:16:33]  *** Contents of shared directory: ***
[2026-01-09 20:16:33] total 446160
[2026-01-09 20:16:33] -rw-r--r--. 2 boincer umatlas 228051459 Jan  9 00:11 ATLAS.root_0
[2026-01-09 20:16:33] -rw-r--r--. 2 boincer umatlas    592403 Jan  9 00:11 input.tar.gz
[2026-01-09 20:16:33] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:11 start_atlas.sh
[2026-01-09 20:16:33] -rw-------. 1 boincer umatlas 220764560 Jan  9 17:58 HITS.pool.root.1
[2026-01-09 20:16:33] -rw-------. 1 boincer umatlas   7434240 Jan  9 18:02 result.tar.gz
20:16:34 (4050040): run_atlas exited; CPU time 74128.604899
20:16:34 (4050040): called boinc_finish(0)

</stderr_txt>
]]>

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