Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:36 (768717): wrapper (7.7.26015): starting
00:04:36 (768717): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:04:36] Arguments: --nthreads 8
[2026-01-09 00:04:36] Threads: 8
[2026-01-09 00:04:36] Checking for CVMFS
[2026-01-09 00:04:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:04:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:04:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:04:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:04:39] 2.13.3.0 6324 20719 151936 154931 1 64 36693108 40960001 6967 16776704 0 11408580 99.827 14986386 38946 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:04:39] CVMFS is ok
[2026-01-09 00:04:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:04:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:04:39] Further information can be found at the LHC@home message board.
[2026-01-09 00:04:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:04:39] Checking for apptainer binary...
[2026-01-09 00:04:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:04:39] Running /usr/bin/apptainer --version
[2026-01-09 00:04:39] apptainer version 1.4.5-2.el9
[2026-01-09 00:04:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:04:41] c-211-8.aglt2.org
[2026-01-09 00:04:41] apptainer works
[2026-01-09 00:04:41] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:04:41] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:04:41] Starting ATLAS job with PandaID=6963151917
[2026-01-09 00:04:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:50:00]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:50:00] 2026-01-10 01:49:00,830 | INFO     | sum of deviations: 1475446840499.0457
[2026-01-09 20:50:00] 2026-01-10 01:49:00,830 | INFO     | mean x: 1767972548.0303528
[2026-01-09 20:50:00] 2026-01-10 01:49:00,830 | INFO     | mean y: 2488464.7284659557
[2026-01-09 20:50:00] 2026-01-10 01:49:00,830 | INFO     | intersect: -4641834851.33927
[2026-01-09 20:50:00] 2026-01-10 01:49:00,832 | INFO     | chi2: 7.846226882689354
[2026-01-09 20:50:00] 2026-01-10 01:49:00,834 | INFO     | sum of square deviations: 554781035180.1823
[2026-01-09 20:50:00] 2026-01-10 01:49:00,896 | INFO     | sum of deviations: 1543198683490.1914
[2026-01-09 20:50:00] 2026-01-10 01:49:00,896 | INFO     | mean x: 1767972395.532949
[2026-01-09 20:50:00] 2026-01-10 01:49:00,896 | INFO     | mean y: 2489960.1202635914
[2026-01-09 20:50:00] 2026-01-10 01:49:00,896 | INFO     | intersect: -4915365013.684557
[2026-01-09 20:50:00] 2026-01-10 01:49:00,898 | INFO     | chi2: 7.168129655448919
[2026-01-09 20:50:00] 2026-01-10 01:49:00,898 | INFO     | current chi2=7.168129655448919 (change=8.642335193447943 %)
[2026-01-09 20:50:00] 2026-01-10 01:49:00,898 | INFO     | right removable region: 1213
[2026-01-09 20:50:00] 2026-01-10 01:49:00,900 | INFO     | sum of square deviations: 554780417370.0482
[2026-01-09 20:50:00] 2026-01-10 01:49:00,962 | INFO     | sum of deviations: 1073964691092.879
[2026-01-09 20:50:00] 2026-01-10 01:49:00,962 | INFO     | mean x: 1767972700.5345964
[2026-01-09 20:50:00] 2026-01-10 01:49:00,962 | INFO     | mean y: 2497357.514827018
[2026-01-09 20:50:00] 2026-01-10 01:49:00,963 | INFO     | intersect: -3420010351.3753157
[2026-01-09 20:50:00] 2026-01-10 01:49:00,964 | INFO     | chi2: 3.961980328151696
[2026-01-09 20:50:00] 2026-01-10 01:49:00,965 | INFO     | current chi2=3.961980328151696 (change=49.504642328241 %)
[2026-01-09 20:50:00] 2026-01-10 01:49:00,966 | INFO     | sum of square deviations: 547953458316.3984
[2026-01-09 20:50:00] 2026-01-10 01:49:01,040 | INFO     | sum of deviations: 779675799730.0752
[2026-01-09 20:50:00] 2026-01-10 01:49:01,040 | INFO     | mean x: 1767972853.0363936
[2026-01-09 20:50:00] 2026-01-10 01:49:01,041 | INFO     | mean y: 2503929.952853598
[2026-01-09 20:50:00] 2026-01-10 01:49:01,041 | INFO     | intersect: -2513121488.9057555
[2026-01-09 20:50:00] 2026-01-10 01:49:01,077 | INFO     | chi2: 1.9375784491848798
[2026-01-09 20:50:00] 2026-01-10 01:49:01,077 | INFO     | current chi2=1.9375784491848798 (change=51.09570748200106 %)
[2026-01-09 20:50:00] 2026-01-10 01:49:01,079 | INFO     | sum of square deviations: 541182806991.3172
[2026-01-09 20:50:00] 2026-01-10 01:49:01,180 | INFO     | sum of deviations: 615589516784.1746
[2026-01-09 20:50:00] 2026-01-10 01:49:01,180 | INFO     | mean x: 1767973005.5373755
[2026-01-09 20:50:00] 2026-01-10 01:49:01,180 | INFO     | mean y: 2507624.073920266
[2026-01-09 20:50:00] 2026-01-10 01:49:01,181 | INFO     | intersect: -2008542309.7124634
[2026-01-09 20:50:00] 2026-01-10 01:49:01,182 | INFO     | chi2: 1.3067788752746394
[2026-01-09 20:50:00] 2026-01-10 01:49:01,182 | INFO     | current chi2=1.3067788752746394 (change=32.55607917065817 %)
[2026-01-09 20:50:00] 2026-01-10 01:49:01,184 | INFO     | sum of square deviations: 534468156594.2349
[2026-01-09 20:50:00] 2026-01-10 01:49:01,250 | INFO     | sum of deviations: 501590924499.24097
[2026-01-09 20:50:00] 2026-01-10 01:49:01,258 | INFO     | mean x: 1767973158.0383654
[2026-01-09 20:50:00] 2026-01-10 01:49:01,259 | INFO     | mean y: 2510212.7556296913
[2026-01-09 20:50:00] 2026-01-10 01:49:01,259 | INFO     | intersect: -1656707983.6682951
[2026-01-09 20:50:00] 2026-01-10 01:49:01,260 | INFO     | chi2: 1.0252931496938613
[2026-01-09 20:50:00] 2026-01-10 01:49:01,261 | INFO     | current chi2=1.0252931496938613 (change=21.540425155833624 %)
[2026-01-09 20:50:00] 2026-01-10 01:49:01,261 | INFO     | left removable region: 40
[2026-01-09 20:50:00] 2026-01-10 01:49:01,262 | INFO     | sum of square deviations: 500446270341.86865
[2026-01-09 20:50:00] 2026-01-10 01:49:01,336 | INFO     | sum of deviations: 327593467483.84094
[2026-01-09 20:50:00] 2026-01-10 01:49:01,336 | INFO     | mean x: 1767973585.0426257
[2026-01-09 20:50:00] 2026-01-10 01:49:01,336 | INFO     | mean y: 2517483.6231884058
[2026-01-09 20:50:00] 2026-01-10 01:49:01,336 | INFO     | intersect: -1154802755.2673912
[2026-01-09 20:50:00] 2026-01-10 01:49:01,338 | INFO     | chi2: 0.009839263677718098
[2026-01-09 20:50:00] 2026-01-10 01:49:01,338 | INFO     | current memory leak: 0.65 B/s (using 1173 data points, chi2=0.01)
[2026-01-09 20:50:00] 2026-01-10 01:49:01,344 | INFO     | could have reported an average CPU frequency of 2634 MHz (44 samples)
[2026-01-09 20:50:00] 2026-01-10 01:49:01,344 | INFO     | ..............................
[2026-01-09 20:50:00] 2026-01-10 01:49:01,344 | INFO     | . Timing measurements:
[2026-01-09 20:50:00] 2026-01-10 01:49:01,344 | INFO     | . get job = 0 s
[2026-01-09 20:50:00] 2026-01-10 01:49:01,344 | INFO     | . initial setup = 11 s
[2026-01-09 20:50:00] 2026-01-10 01:49:01,344 | INFO     | . payload setup = 58 s
[2026-01-09 20:50:00] 2026-01-10 01:49:01,345 | INFO     | . stage-in = 0 s
[2026-01-09 20:50:00] 2026-01-10 01:49:01,345 | INFO     | . payload execution = 74370 s
[2026-01-09 20:50:00] 2026-01-10 01:49:01,345 | INFO     | . stage-out = 3 s
[2026-01-09 20:50:00] 2026-01-10 01:49:01,345 | INFO     | . log creation = 0 s
[2026-01-09 20:50:00] 2026-01-10 01:49:01,345 | INFO     | ..............................
[2026-01-09 20:50:00] 2026-01-10 01:49:01,561 | INFO     | 
[2026-01-09 20:50:00] 2026-01-10 01:49:01,563 | INFO     | job summary report
[2026-01-09 20:50:00] 2026-01-10 01:49:01,563 | INFO     | --------------------------------------------------
[2026-01-09 20:50:00] 2026-01-10 01:49:01,563 | INFO     | PanDA job id: 6963151917
[2026-01-09 20:50:00] 2026-01-10 01:49:01,563 | INFO     | task id: 47898826
[2026-01-09 20:50:00] 2026-01-10 01:49:01,563 | INFO     | errors: (none)
[2026-01-09 20:50:00] 2026-01-10 01:49:01,563 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:50:00] 2026-01-10 01:49:01,564 | INFO     | pilot state: finished 
[2026-01-09 20:50:00] 2026-01-10 01:49:01,564 | INFO     | transexitcode: 0
[2026-01-09 20:50:00] 2026-01-10 01:49:01,564 | INFO     | exeerrorcode: 0
[2026-01-09 20:50:00] 2026-01-10 01:49:01,564 | INFO     | exeerrordiag: 
[2026-01-09 20:50:00] 2026-01-10 01:49:01,564 | INFO     | exitcode: 0
[2026-01-09 20:50:00] 2026-01-10 01:49:01,564 | INFO     | exitmsg: OK
[2026-01-09 20:50:00] 2026-01-10 01:49:01,564 | INFO     | cpuconsumptiontime: 77901 s
[2026-01-09 20:50:00] 2026-01-10 01:49:01,564 | INFO     | nevents: 400
[2026-01-09 20:50:00] 2026-01-10 01:49:01,565 | INFO     | neventsw: 0
[2026-01-09 20:50:00] 2026-01-10 01:49:01,565 | INFO     | pid: 827758
[2026-01-09 20:50:00] 2026-01-10 01:49:01,565 | INFO     | pgrp: 827758
[2026-01-09 20:50:00] 2026-01-10 01:49:01,565 | INFO     | corecount: 8
[2026-01-09 20:50:00] 2026-01-10 01:49:01,565 | INFO     | event service: False
[2026-01-09 20:50:00] 2026-01-10 01:49:01,565 | INFO     | sizes: {0: 2283143, 1: 2283744, 2: 2283828, 5: 2283912, 7: 2284111, 19: 2284111, 30: 2284267, 41: 2284295, 51: 2284585, 52: 2284613, 74433: 2342922, 74437: 2351976
[2026-01-09 20:50:00] 2026-01-10 01:49:01,565 | INFO     | --------------------------------------------------
[2026-01-09 20:50:00] 2026-01-10 01:49:01,565 | INFO     | 
[2026-01-09 20:50:00] 2026-01-10 01:49:01,566 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-09 20:50:00] 2026-01-10 01:49:01,632 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,633 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,633 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,633 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,633 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,633 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,633 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,634 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,634 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,634 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,634 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,634 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,634 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,634 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,635 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,635 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,635 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:50:00] 2026-01-10 01:49:01,635 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,635 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:50:00] 2026-01-10 01:49:01,635 | INFO     | job 6963151917 has completed (purged errors)
[2026-01-09 20:50:00] 2026-01-10 01:49:01,636 | INFO     | overall cleanup function is called
[2026-01-09 20:50:00] 2026-01-10 01:49:01,690 | INFO     | number of running child processes to parent process 827758: 1
[2026-01-09 20:50:00] 2026-01-10 01:49:01,690 | INFO     | maximum number of monitored processes: 6
[2026-01-09 20:50:00] 2026-01-10 01:49:01,691 | INFO     | aborting job monitoring since job object (job id=6963151917) has expired
[2026-01-09 20:50:00] 2026-01-10 01:49:02,644 | INFO     | --- collectZombieJob: --- 10, [827758]
[2026-01-09 20:50:00] 2026-01-10 01:49:02,645 | INFO     | zombie collector waiting for pid 827758
[2026-01-09 20:50:00] 2026-01-10 01:49:02,645 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:50:00] 2026-01-10 01:49:02,645 | INFO     | collected zombie processes
[2026-01-09 20:50:00] 2026-01-10 01:49:02,645 | INFO     | will attempt to kill all subprocesses of pid=827758
[2026-01-09 20:50:00] 2026-01-10 01:49:03,193 | INFO     | process IDs to be killed: [827758] (in reverse order)
[2026-01-09 20:50:00] 2026-01-10 01:49:03,328 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:50:00] 2026-01-10 01:49:03,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:50:00] 2026-01-10 01:49:03,337 | INFO     | did not find any defunct processes belonging to 827758
[2026-01-09 20:50:00] 2026-01-10 01:49:03,343 | INFO     | did not find any defunct processes belonging to 827758
[2026-01-09 20:50:00] 2026-01-10 01:49:03,343 | INFO     | ready for new job
[2026-01-09 20:50:00] 2026-01-10 01:49:03,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:50:00] 2026-01-10 01:49:03,361 | INFO     | ***************************************
[2026-01-09 20:50:00] 2026-01-10 01:49:03,362 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:50:00] 2026-01-10 01:49:03,362 | INFO     | ***************************************
[2026-01-09 20:50:00] 2026-01-10 01:49:03,362 | INFO     | 
[2026-01-09 20:50:00] 2026-01-10 01:49:03,368 | INFO     | architecture information:
[2026-01-09 20:50:00] 2026-01-10 01:49:03,368 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:50:00] 2026-01-10 01:49:03,414 | INFO     | cat /etc/os-release:
[2026-01-09 20:50:00] NAME="CentOS Linux"
[2026-01-09 20:50:00] VERSION="7 (Core)"
[2026-01-09 20:50:00] ID="centos"
[2026-01-09 20:50:00] ID_LIKE="rhel fedora"
[2026-01-09 20:50:00] VERSION_ID="7"
[2026-01-09 20:50:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:50:00] ANSI_COLOR="0;31"
[2026-01-09 20:50:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:50:00] HOME_URL="https://www.centos.org/"
[2026-01-09 20:50:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:50:00] 
[2026-01-09 20:50:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:50:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:50:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:50:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:50:00] 
[2026-01-09 20:50:00] 2026-01-10 01:49:03,414 | INFO     | ***************************************
[2026-01-09 20:50:00] 2026-01-10 01:49:03,923 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-09 20:50:00] 2026-01-10 01:49:03,941 | INFO     | sufficient remaining disk space (63559434240 B)
[2026-01-09 20:50:00] 2026-01-10 01:49:03,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:50:00] 2026-01-10 01:49:03,947 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:50:00] 2026-01-10 01:49:03,947 | INFO     | update_server=False
[2026-01-09 20:50:00] 2026-01-10 01:49:03,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:50:00] 2026-01-10 01:49:03,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:50:00] 2026-01-10 01:49:04,196 | INFO     | all data control threads have been joined
[2026-01-09 20:50:00] 2026-01-10 01:49:04,207 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 20:50:00] 2026-01-10 01:49:04,208 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 20:50:00] 2026-01-10 01:49:04,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:50:00] 2026-01-10 01:49:04,209 | INFO     | will abort loop
[2026-01-09 20:50:00] 2026-01-10 01:49:04,237 | INFO     | all payload control threads have been joined
[2026-01-09 20:50:00] 2026-01-10 01:49:04,283 | INFO     | all job control threads have been joined
[2026-01-09 20:50:00] 2026-01-10 01:49:04,958 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:50:00] 2026-01-10 01:49:05,043 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:50:00] 2026-01-10 01:49:05,110 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:50:00] 2026-01-10 01:49:05,204 | INFO     | [data] control thread has finished
[2026-01-09 20:50:00] 2026-01-10 01:49:05,216 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:50:00] 2026-01-10 01:49:05,246 | INFO     | [payload] control thread has finished
[2026-01-09 20:50:00] 2026-01-10 01:49:05,264 | INFO     | [job] validate thread has finished
[2026-01-09 20:50:00] 2026-01-10 01:49:05,290 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:50:00] 2026-01-10 01:49:05,295 | INFO     | [job] control thread has finished
[2026-01-09 20:50:00] 2026-01-10 01:49:05,339 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:50:00] 2026-01-10 01:49:05,618 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:50:00] 2026-01-10 01:49:05,618 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:50:00] 2026-01-10 01:49:05,913 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:50:00] 2026-01-10 01:49:05,955 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:50:00] 2026-01-10 01:49:05,959 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:50:00] 2026-01-10 01:49:06,574 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:50:00] 2026-01-10 01:49:07,580 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:50:00] 2026-01-10 01:49:09,067 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:50:00] 2026-01-10 01:49:34,098 | INFO     | PID=784588 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 20:50:00] 2026-01-10 01:49:34,099 | INFO     | .. there are 8 such processes running
[2026-01-09 20:50:00] 2026-01-10 01:49:34,099 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:50:00] 2026-01-10 01:49:34,100 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:50:00] 2026-01-10 01:49:34,100 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:50:00] 2026-01-10 01:49:54,618 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:50:00] 2026-01-10 01:49:54,881 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140497347938112)>', '<ExcThread(monitor, started 140496827574016)>']
[2026-01-09 20:50:00] 2026-01-10 01:49:55,224 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:50:00] 2026-01-10 01:49:55,225 | INFO     | [monitor] control thread has ended
[2026-01-09 20:50:00] 2026-01-10 01:49:59,907 | INFO     | all workflow threads have been joined
[2026-01-09 20:50:00] 2026-01-10 01:49:59,908 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:50:00] 2026-01-10 01:49:59,909 | INFO     | traces error code: 0
[2026-01-09 20:50:00] 2026-01-10 01:49:59,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:50:00] 2026-01-10 01:50:00,196 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:50:00] 2026-01-10 01:50:00,198 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:50:00] 2026-01-10 01:50:00,200 [wrapper] pilotpid: 784588
[2026-01-09 20:50:00] 2026-01-10 01:50:00,202 [wrapper] Pilot exit status: 0
[2026-01-09 20:50:00] 2026-01-10 01:50:00,211 [wrapper] pandaids: 6963151917
[2026-01-09 20:50:00] 2026-01-10 01:50:00,285 [wrapper] cleanup supervisor_pilot 2872478 784589
[2026-01-09 20:50:00] 2026-01-10 01:50:00,321 [wrapper] Test setup, not cleaning
[2026-01-09 20:50:00] 2026-01-10 01:50:00,352 [wrapper] apfmon messages muted
[2026-01-09 20:50:00] 2026-01-10 01:50:00,401 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:50:00] 2026-01-10 01:50:00,442 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:50:00]  *** Error codes and diagnostics ***
[2026-01-09 20:50:00]     "exeErrorCode": 0,
[2026-01-09 20:50:00]     "exeErrorDiag": "",
[2026-01-09 20:50:00]     "pilotErrorCode": 0,
[2026-01-09 20:50:00]     "pilotErrorDiag": "",
[2026-01-09 20:50:00]  *** Listing of results directory ***
[2026-01-09 20:50:00] total 457496
[2026-01-09 20:50:00] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 20:50:00] -rwx------. 1 boincer umatlas     36322 Jan  8 11:06 runpilot2-wrapper.sh
[2026-01-09 20:50:00] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 20:50:00] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:50:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:04 run_atlas
[2026-01-09 20:50:00] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:04 job.xml
[2026-01-09 20:50:00] -rw-r--r--. 2 boincer umatlas 222535098 Jan  9 00:04 EVNT.47898824._001130.pool.root.1
[2026-01-09 20:50:00] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:04 start_atlas.sh
[2026-01-09 20:50:00] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:04 shared
[2026-01-09 20:50:00] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 00:04 input.tar.gz
[2026-01-09 20:50:00] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:04 boinc_lockfile
[2026-01-09 20:50:00] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 00:04 pandaJob.out
[2026-01-09 20:50:00] -rw-------. 1 boincer umatlas        57 Jan  9 00:04 setup.sh.local
[2026-01-09 20:50:00] -rw-------. 1 boincer umatlas    989771 Jan  9 00:06 agis_schedconf.cvmfs.json
[2026-01-09 20:50:00] drwx------. 5 boincer umatlas      4096 Jan  9 00:06 pilot3
[2026-01-09 20:50:00] -rw-r--r--. 1 boincer umatlas      6609 Jan  9 20:45 init_data.xml
[2026-01-09 20:50:00] -rw-------. 1 boincer umatlas 222527052 Jan  9 20:47 HITS.47898826._028868.pool.root.1
[2026-01-09 20:50:00] -rw-r--r--. 1 boincer umatlas       530 Jan  9 20:47 boinc_task_state.xml
[2026-01-09 20:50:00] -rw-------. 1 boincer umatlas      1051 Jan  9 20:48 memory_monitor_summary.json
[2026-01-09 20:50:00] -rw-------. 1 boincer umatlas   1516240 Jan  9 20:48 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:50:00] -rw-------. 1 boincer umatlas   1192973 Jan  9 20:48 log.47898826._028868.job.log.tgz.1
[2026-01-09 20:50:00] -rw-------. 1 boincer umatlas      7820 Jan  9 20:49 heartbeat.json
[2026-01-09 20:50:00] -rw-------. 1 boincer umatlas        95 Jan  9 20:49 pilot_heartbeat.json
[2026-01-09 20:50:00] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 20:49 boinc_mmap_file
[2026-01-09 20:50:00] -rw-r--r--. 1 boincer umatlas        27 Jan  9 20:49 wrapper_checkpoint.txt
[2026-01-09 20:50:00] -rw-------. 1 boincer umatlas      5008 Jan  9 20:49 pilotlog.txt
[2026-01-09 20:50:00] -rw-------. 1 boincer umatlas   8559597 Jan  9 20:50 log.47898826._028868.job.log.1
[2026-01-09 20:50:00] -rw-------. 1 boincer umatlas       357 Jan  9 20:50 output.list
[2026-01-09 20:50:00] -rw-r--r--. 1 boincer umatlas       620 Jan  9 20:50 runtime_log
[2026-01-09 20:50:00] -rw-------. 1 boincer umatlas   9768960 Jan  9 20:50 result.tar.gz
[2026-01-09 20:50:00] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 20:50 runtime_log.err
[2026-01-09 20:50:00] -rw-------. 1 boincer umatlas       657 Jan  9 20:50 rrsLDmAi7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTqfKDmjdzSGn.diag
[2026-01-09 20:50:00] -rw-r--r--. 1 boincer umatlas     21126 Jan  9 20:50 stderr.txt
[2026-01-09 20:50:00] HITS file was successfully produced:
[2026-01-09 20:50:00] -rw-------. 1 boincer umatlas 222527052 Jan  9 20:47 shared/HITS.pool.root.1
[2026-01-09 20:50:00]  *** Contents of shared directory: ***
[2026-01-09 20:50:00] total 444772
[2026-01-09 20:50:00] -rw-r--r--. 2 boincer umatlas 222535098 Jan  9 00:04 ATLAS.root_0
[2026-01-09 20:50:00] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:04 start_atlas.sh
[2026-01-09 20:50:00] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 00:04 input.tar.gz
[2026-01-09 20:50:00] -rw-------. 1 boincer umatlas 222527052 Jan  9 20:47 HITS.pool.root.1
[2026-01-09 20:50:00] -rw-------. 1 boincer umatlas   9768960 Jan  9 20:50 result.tar.gz
20:50:01 (768717): run_atlas exited; CPU time 80348.351901
20:50:01 (768717): called boinc_finish(0)

</stderr_txt>
]]>

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