Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:09 (685225): wrapper (7.7.26015): starting
00:04:09 (685225): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:04:09] Arguments: --nthreads 12
[2026-01-09 00:04:09] Threads: 12
[2026-01-09 00:04:09] Checking for CVMFS
[2026-01-09 00:04:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:04:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:04:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:04:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:04:11] 2.13.3.0 12563 22466 289216 154931 2 140 26117998 40960000 22475 16776704 0 29378857 99.720 17436835 33866 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:04:11] CVMFS is ok
[2026-01-09 00:04:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:04:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:04:11] Further information can be found at the LHC@home message board.
[2026-01-09 00:04:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:04:11] Checking for apptainer binary...
[2026-01-09 00:04:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:04:11] Running /usr/bin/apptainer --version
[2026-01-09 00:04:11] apptainer version 1.4.5-2.el9
[2026-01-09 00:04:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:04:12] c-211-33-3.aglt2.org
[2026-01-09 00:04:12] apptainer works
[2026-01-09 00:04:12] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:04:12] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:04:12] Starting ATLAS job with PandaID=6963152538
[2026-01-09 00:04:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:20:26]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:20:26] 2026-01-09 13:19:18,432 | INFO     | time since job start (29635s) is within the limit (349056.0s)
[2026-01-09 08:20:26] 2026-01-09 13:19:18,472 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 08:20:26] 2026-01-09 13:19:18,523 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2715.556937500001
[2026-01-09 08:20:26] 2026-01-09 13:19:18,565 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6963152538/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:20:26] 2026-01-09 13:19:18,565 | INFO     | extracted standard info from prmon json
[2026-01-09 08:20:26] 2026-01-09 13:19:18,566 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:20:26] 2026-01-09 13:19:18,566 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:20:26] 2026-01-09 13:19:18,568 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:20:26] 2026-01-09 13:19:18,568 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:20:26] 2026-01-09 13:19:18,581 | INFO     | fitting pss+swap vs Time
[2026-01-09 08:20:26] 2026-01-09 13:19:18,582 | INFO     | sum of square deviations: 34938427944.74945
[2026-01-09 08:20:26] 2026-01-09 13:19:18,587 | INFO     | sum of deviations: 214874847214.15732
[2026-01-09 08:20:26] 2026-01-09 13:19:18,588 | INFO     | mean x: 1767949972.5010352
[2026-01-09 08:20:26] 2026-01-09 13:19:18,588 | INFO     | mean y: 2650344.685300207
[2026-01-09 08:20:26] 2026-01-09 13:19:18,588 | INFO     | intersect: -10870419869.698034
[2026-01-09 08:20:26] 2026-01-09 13:19:18,589 | INFO     | chi2: 5.0812593070761265
[2026-01-09 08:20:26] 2026-01-09 13:19:18,589 | INFO     | sum of square deviations: 33864553168.997982
[2026-01-09 08:20:26] 2026-01-09 13:19:18,598 | INFO     | sum of deviations: 279270807633.973
[2026-01-09 08:20:26] 2026-01-09 13:19:18,599 | INFO     | mean x: 1767949820.0020921
[2026-01-09 08:20:26] 2026-01-09 13:19:18,599 | INFO     | mean y: 2659430.0271966527
[2026-01-09 08:20:26] 2026-01-09 13:19:18,599 | INFO     | intersect: -14577092194.757956
[2026-01-09 08:20:26] 2026-01-09 13:19:18,600 | INFO     | chi2: 3.6384339197870363
[2026-01-09 08:20:26] 2026-01-09 13:19:18,600 | INFO     | current chi2=3.6384339197870363 (change=28.39503556293263 %)
[2026-01-09 08:20:26] 2026-01-09 13:19:18,600 | INFO     | sum of square deviations: 32812969440.224068
[2026-01-09 08:20:26] 2026-01-09 13:19:18,606 | INFO     | sum of deviations: 275871126913.4036
[2026-01-09 08:20:26] 2026-01-09 13:19:18,606 | INFO     | mean x: 1767949667.5073996
[2026-01-09 08:20:26] 2026-01-09 13:19:18,606 | INFO     | mean y: 2658937.0274841436
[2026-01-09 08:20:26] 2026-01-09 13:19:18,606 | INFO     | intersect: -14861167026.36003
[2026-01-09 08:20:26] 2026-01-09 13:19:18,607 | INFO     | chi2: 3.6383436320174445
[2026-01-09 08:20:26] 2026-01-09 13:19:18,607 | INFO     | current chi2=3.6383436320174445 (change=0.0024815008759906682 %)
[2026-01-09 08:20:26] 2026-01-09 13:19:18,607 | INFO     | right removable region: 472
[2026-01-09 08:20:26] 2026-01-09 13:19:18,608 | INFO     | sum of square deviations: 33864464230.98128
[2026-01-09 08:20:26] 2026-01-09 13:19:18,614 | INFO     | sum of deviations: 68464349557.083786
[2026-01-09 08:20:26] 2026-01-09 13:19:18,614 | INFO     | mean x: 1767950125.0062761
[2026-01-09 08:20:26] 2026-01-09 13:19:18,614 | INFO     | mean y: 2671107.3054393306
[2026-01-09 08:20:26] 2026-01-09 13:19:18,614 | INFO     | intersect: -3571623012.109078
[2026-01-09 08:20:26] 2026-01-09 13:19:18,615 | INFO     | chi2: 2.0718305215441677
[2026-01-09 08:20:26] 2026-01-09 13:19:18,615 | INFO     | current chi2=2.0718305215441677 (change=59.22604227934302 %)
[2026-01-09 08:20:26] 2026-01-09 13:19:18,615 | INFO     | sum of square deviations: 32812733492.186157
[2026-01-09 08:20:26] 2026-01-09 13:19:18,621 | INFO     | sum of deviations: 10940906137.69762
[2026-01-09 08:20:26] 2026-01-09 13:19:18,621 | INFO     | mean x: 1767950277.511628
[2026-01-09 08:20:26] 2026-01-09 13:19:18,621 | INFO     | mean y: 2679442.418604651
[2026-01-09 08:20:26] 2026-01-09 13:19:18,621 | INFO     | intersect: -586816645.9514
[2026-01-09 08:20:26] 2026-01-09 13:19:18,622 | INFO     | chi2: 1.6470809819455943
[2026-01-09 08:20:26] 2026-01-09 13:19:18,622 | INFO     | current chi2=1.6470809819455943 (change=20.501172039979455 %)
[2026-01-09 08:20:26] 2026-01-09 13:19:18,622 | INFO     | left removable region: 20
[2026-01-09 08:20:26] 2026-01-09 13:19:18,623 | INFO     | sum of square deviations: 28633434931.858322
[2026-01-09 08:20:26] 2026-01-09 13:19:18,628 | INFO     | sum of deviations: 32939782709.946934
[2026-01-09 08:20:26] 2026-01-09 13:19:18,628 | INFO     | mean x: 1767950247.017699
[2026-01-09 08:20:26] 2026-01-09 13:19:18,628 | INFO     | mean y: 2695310.756637168
[2026-01-09 08:20:26] 2026-01-09 13:19:18,628 | INFO     | intersect: -2031147192.5039551
[2026-01-09 08:20:26] 2026-01-09 13:19:18,629 | INFO     | chi2: 0.007357020341966628
[2026-01-09 08:20:26] 2026-01-09 13:19:18,629 | INFO     | current memory leak: 1.15 B/s (using 452 data points, chi2=0.01)
[2026-01-09 08:20:26] 2026-01-09 13:19:18,630 | INFO     | could have reported an average CPU frequency of 2679 MHz (20 samples)
[2026-01-09 08:20:26] 2026-01-09 13:19:18,630 | INFO     | ..............................
[2026-01-09 08:20:26] 2026-01-09 13:19:18,630 | INFO     | . Timing measurements:
[2026-01-09 08:20:26] 2026-01-09 13:19:18,630 | INFO     | . get job = 0 s
[2026-01-09 08:20:26] 2026-01-09 13:19:18,630 | INFO     | . initial setup = 4 s
[2026-01-09 08:20:26] 2026-01-09 13:19:18,630 | INFO     | . payload setup = 46 s
[2026-01-09 08:20:26] 2026-01-09 13:19:18,631 | INFO     | . stage-in = 0 s
[2026-01-09 08:20:26] 2026-01-09 13:19:18,631 | INFO     | . payload execution = 29483 s
[2026-01-09 08:20:26] 2026-01-09 13:19:18,631 | INFO     | . stage-out = 3 s
[2026-01-09 08:20:26] 2026-01-09 13:19:18,631 | INFO     | . log creation = 0 s
[2026-01-09 08:20:26] 2026-01-09 13:19:18,631 | INFO     | ..............................
[2026-01-09 08:20:26] 2026-01-09 13:19:18,734 | INFO     | 
[2026-01-09 08:20:26] 2026-01-09 13:19:18,734 | INFO     | job summary report
[2026-01-09 08:20:26] 2026-01-09 13:19:18,734 | INFO     | --------------------------------------------------
[2026-01-09 08:20:26] 2026-01-09 13:19:18,734 | INFO     | PanDA job id: 6963152538
[2026-01-09 08:20:26] 2026-01-09 13:19:18,734 | INFO     | task id: 47898826
[2026-01-09 08:20:26] 2026-01-09 13:19:18,734 | INFO     | errors: (none)
[2026-01-09 08:20:26] 2026-01-09 13:19:18,734 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:20:26] 2026-01-09 13:19:18,735 | INFO     | pilot state: finished 
[2026-01-09 08:20:26] 2026-01-09 13:19:18,735 | INFO     | transexitcode: 0
[2026-01-09 08:20:26] 2026-01-09 13:19:18,735 | INFO     | exeerrorcode: 0
[2026-01-09 08:20:26] 2026-01-09 13:19:18,735 | INFO     | exeerrordiag: 
[2026-01-09 08:20:26] 2026-01-09 13:19:18,735 | INFO     | exitcode: 0
[2026-01-09 08:20:26] 2026-01-09 13:19:18,735 | INFO     | exitmsg: OK
[2026-01-09 08:20:26] 2026-01-09 13:19:18,735 | INFO     | cpuconsumptiontime: 61875 s
[2026-01-09 08:20:26] 2026-01-09 13:19:18,735 | INFO     | nevents: 400
[2026-01-09 08:20:26] 2026-01-09 13:19:18,735 | INFO     | neventsw: 0
[2026-01-09 08:20:26] 2026-01-09 13:19:18,735 | INFO     | pid: 729434
[2026-01-09 08:20:26] 2026-01-09 13:19:18,735 | INFO     | pgrp: 729434
[2026-01-09 08:20:26] 2026-01-09 13:19:18,735 | INFO     | corecount: 12
[2026-01-09 08:20:26] 2026-01-09 13:19:18,735 | INFO     | event service: False
[2026-01-09 08:20:26] 2026-01-09 13:19:18,736 | INFO     | sizes: {0: 2283797, 1: 2283996, 2: 2283996, 13: 2284024, 24: 2284080, 32: 2284370, 35: 2284526, 29533: 2321623, 29537: 2330621, 29539: 2330677, 29568: 2330871}
[2026-01-09 08:20:26] 2026-01-09 13:19:18,736 | INFO     | --------------------------------------------------
[2026-01-09 08:20:26] 2026-01-09 13:19:18,736 | INFO     | 
[2026-01-09 08:20:26] 2026-01-09 13:19:18,736 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-01-09 08:20:26] 2026-01-09 13:19:18,785 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,785 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,785 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,785 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,786 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,786 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,787 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:20:26] 2026-01-09 13:19:18,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,787 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:20:26] 2026-01-09 13:19:18,787 | INFO     | job 6963152538 has completed (purged errors)
[2026-01-09 08:20:26] 2026-01-09 13:19:18,787 | INFO     | overall cleanup function is called
[2026-01-09 08:20:26] 2026-01-09 13:19:19,800 | INFO     | --- collectZombieJob: --- 10, [729434]
[2026-01-09 08:20:26] 2026-01-09 13:19:19,801 | INFO     | zombie collector waiting for pid 729434
[2026-01-09 08:20:26] 2026-01-09 13:19:19,801 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:20:26] 2026-01-09 13:19:19,801 | INFO     | collected zombie processes
[2026-01-09 08:20:26] 2026-01-09 13:19:19,801 | INFO     | will attempt to kill all subprocesses of pid=729434
[2026-01-09 08:20:26] 2026-01-09 13:19:21,171 | INFO     | process IDs to be killed: [729434] (in reverse order)
[2026-01-09 08:20:26] 2026-01-09 13:19:21,403 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:20:26] 2026-01-09 13:19:21,403 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:20:26] 2026-01-09 13:19:21,444 | INFO     | did not find any defunct processes belonging to 729434
[2026-01-09 08:20:26] 2026-01-09 13:19:21,497 | INFO     | did not find any defunct processes belonging to 729434
[2026-01-09 08:20:26] 2026-01-09 13:19:21,497 | INFO     | ready for new job
[2026-01-09 08:20:26] 2026-01-09 13:19:21,497 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:20:26] 2026-01-09 13:19:21,500 | INFO     | ***************************************
[2026-01-09 08:20:26] 2026-01-09 13:19:21,500 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:20:26] 2026-01-09 13:19:21,511 | INFO     | ***************************************
[2026-01-09 08:20:26] 2026-01-09 13:19:21,511 | INFO     | 
[2026-01-09 08:20:26] 2026-01-09 13:19:21,527 | INFO     | architecture information:
[2026-01-09 08:20:26] 2026-01-09 13:19:21,535 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:20:26] 2026-01-09 13:19:21,822 | INFO     | cat /etc/os-release:
[2026-01-09 08:20:26] NAME="CentOS Linux"
[2026-01-09 08:20:26] VERSION="7 (Core)"
[2026-01-09 08:20:26] ID="centos"
[2026-01-09 08:20:26] ID_LIKE="rhel fedora"
[2026-01-09 08:20:26] VERSION_ID="7"
[2026-01-09 08:20:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:20:26] ANSI_COLOR="0;31"
[2026-01-09 08:20:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:20:26] HOME_URL="https://www.centos.org/"
[2026-01-09 08:20:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:20:26] 
[2026-01-09 08:20:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:20:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:20:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:20:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:20:26] 
[2026-01-09 08:20:26] 2026-01-09 13:19:21,822 | INFO     | ***************************************
[2026-01-09 08:20:26] 2026-01-09 13:19:22,326 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-01-09 08:20:26] 2026-01-09 13:19:22,542 | INFO     | sufficient remaining disk space (128023789568 B)
[2026-01-09 08:20:26] 2026-01-09 13:19:22,542 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:20:26] 2026-01-09 13:19:22,542 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:20:26] 2026-01-09 13:19:22,542 | INFO     | update_server=False
[2026-01-09 08:20:26] 2026-01-09 13:19:22,543 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:20:26] 2026-01-09 13:19:22,543 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:20:26] 2026-01-09 13:19:22,543 | INFO     | aborting loop
[2026-01-09 08:20:26] 2026-01-09 13:19:22,545 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:20:26] 2026-01-09 13:19:22,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:20:26] 2026-01-09 13:19:22,990 | INFO     | all payload control threads have been joined
[2026-01-09 08:20:26] 2026-01-09 13:19:23,540 | INFO     | all data control threads have been joined
[2026-01-09 08:20:26] 2026-01-09 13:19:23,544 | INFO     | all job control threads have been joined
[2026-01-09 08:20:26] 2026-01-09 13:19:23,549 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:20:26] 2026-01-09 13:19:23,553 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:20:26] 2026-01-09 13:19:23,682 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:20:26] 2026-01-09 13:19:23,755 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:20:26] 2026-01-09 13:19:23,779 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:20:26] 2026-01-09 13:19:23,965 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:20:26] 2026-01-09 13:19:23,997 | INFO     | [payload] control thread has finished
[2026-01-09 08:20:26] 2026-01-09 13:19:24,136 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:20:26] 2026-01-09 13:19:24,547 | INFO     | [data] control thread has finished
[2026-01-09 08:20:26] 2026-01-09 13:19:24,551 | INFO     | [job] control thread has finished
[2026-01-09 08:20:26] 2026-01-09 13:19:24,731 | INFO     | [job] validate thread has finished
[2026-01-09 08:20:26] 2026-01-09 13:19:24,736 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:20:26] 2026-01-09 13:19:24,739 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:20:26] 2026-01-09 13:19:24,762 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:20:26] 2026-01-09 13:19:24,779 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:20:26] 2026-01-09 13:19:25,090 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:20:26] 2026-01-09 13:19:26,576 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:20:26] 2026-01-09 13:19:54,161 | INFO     | PID=699216 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 08:20:26] 2026-01-09 13:19:54,161 | INFO     | .. there are 16 such processes running
[2026-01-09 08:20:26] 2026-01-09 13:19:54,162 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:20:26] 2026-01-09 13:19:54,162 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:20:26] 2026-01-09 13:19:54,162 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:20:26] 2026-01-09 13:20:17,903 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:20:26] 2026-01-09 13:20:19,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139774323504960)>', '<ExcThread(monitor, started 139773796673280)>']
[2026-01-09 08:20:26] 2026-01-09 13:20:19,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:20:26] 2026-01-09 13:20:19,319 | INFO     | [monitor] control thread has ended
[2026-01-09 08:20:26] 2026-01-09 13:20:20,204 [wrapper] supervise_pilot (15 min periods counter: 34)
[2026-01-09 08:20:26] 2026-01-09 13:20:24,260 | INFO     | all workflow threads have been joined
[2026-01-09 08:20:26] 2026-01-09 13:20:24,261 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:20:26] 2026-01-09 13:20:24,261 | INFO     | traces error code: 0
[2026-01-09 08:20:26] 2026-01-09 13:20:24,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:20:26] 2026-01-09 13:20:25,300 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:20:26] 2026-01-09 13:20:25,333 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:20:26] 2026-01-09 13:20:25,358 [wrapper] pilotpid: 699216
[2026-01-09 08:20:26] 2026-01-09 13:20:25,385 [wrapper] Pilot exit status: 0
[2026-01-09 08:20:26] 2026-01-09 13:20:25,512 [wrapper] pandaids: 6963152538
[2026-01-09 08:20:26] 2026-01-09 13:20:25,631 [wrapper] cleanup supervisor_pilot 1757158 699217
[2026-01-09 08:20:26] 2026-01-09 13:20:25,648 [wrapper] Test setup, not cleaning
[2026-01-09 08:20:26] 2026-01-09 13:20:25,683 [wrapper] apfmon messages muted
[2026-01-09 08:20:26] 2026-01-09 13:20:25,710 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:20:26] 2026-01-09 13:20:25,729 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:20:26]  *** Error codes and diagnostics ***
[2026-01-09 08:20:26]     "exeErrorCode": 0,
[2026-01-09 08:20:26]     "exeErrorDiag": "",
[2026-01-09 08:20:26]     "pilotErrorCode": 0,
[2026-01-09 08:20:26]     "pilotErrorDiag": "",
[2026-01-09 08:20:26]  *** Listing of results directory ***
[2026-01-09 08:20:26] total 455108
[2026-01-09 08:20:26] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 08:20:26] -rwx------. 1 boincer umatlas     36322 Jan  8 11:06 runpilot2-wrapper.sh
[2026-01-09 08:20:26] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 08:20:26] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:20:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:04 run_atlas
[2026-01-09 08:20:26] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:04 job.xml
[2026-01-09 08:20:26] -rw-r--r--. 2 boincer umatlas 227415352 Jan  9 00:04 EVNT.47898824._000872.pool.root.1
[2026-01-09 08:20:26] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:04 start_atlas.sh
[2026-01-09 08:20:26] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:04 shared
[2026-01-09 08:20:26] -rw-r--r--. 2 boincer umatlas    592393 Jan  9 00:04 input.tar.gz
[2026-01-09 08:20:26] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:04 boinc_lockfile
[2026-01-09 08:20:26] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 00:04 pandaJob.out
[2026-01-09 08:20:26] -rw-------. 1 boincer umatlas        57 Jan  9 00:04 setup.sh.local
[2026-01-09 08:20:26] -rw-------. 1 boincer umatlas    989771 Jan  9 00:05 agis_schedconf.cvmfs.json
[2026-01-09 08:20:26] drwx------. 5 boincer umatlas      4096 Jan  9 00:05 pilot3
[2026-01-09 08:20:26] -rw-------. 1 boincer umatlas 226139733 Jan  9 08:16 HITS.47898826._029296.pool.root.1
[2026-01-09 08:20:26] -rw-r--r--. 1 boincer umatlas       531 Jan  9 08:16 boinc_task_state.xml
[2026-01-09 08:20:26] -rw-------. 1 boincer umatlas      1041 Jan  9 08:18 memory_monitor_summary.json
[2026-01-09 08:20:26] -rw-------. 1 boincer umatlas   1516240 Jan  9 08:18 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:20:26] -rw-------. 1 boincer umatlas    720257 Jan  9 08:18 log.47898826._029296.job.log.tgz.1
[2026-01-09 08:20:26] -rw-------. 1 boincer umatlas        95 Jan  9 08:18 pilot_heartbeat.json
[2026-01-09 08:20:26] -rw-------. 1 boincer umatlas      7830 Jan  9 08:19 heartbeat.json
[2026-01-09 08:20:26] -rw-r--r--. 1 boincer umatlas      6860 Jan  9 08:20 init_data.xml
[2026-01-09 08:20:26] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 08:20 boinc_mmap_file
[2026-01-09 08:20:26] -rw-r--r--. 1 boincer umatlas        28 Jan  9 08:20 wrapper_checkpoint.txt
[2026-01-09 08:20:26] -rw-------. 1 boincer umatlas      4824 Jan  9 08:20 pilotlog.txt
[2026-01-09 08:20:26] -rw-------. 1 boincer umatlas   3556585 Jan  9 08:20 log.47898826._029296.job.log.1
[2026-01-09 08:20:26] -rw-------. 1 boincer umatlas       357 Jan  9 08:20 output.list
[2026-01-09 08:20:26] -rw-r--r--. 1 boincer umatlas       620 Jan  9 08:20 runtime_log
[2026-01-09 08:20:26] -rw-------. 1 boincer umatlas   4300800 Jan  9 08:20 result.tar.gz
[2026-01-09 08:20:26] -rw-r--r--. 1 boincer umatlas      9355 Jan  9 08:20 runtime_log.err
[2026-01-09 08:20:26] -rw-------. 1 boincer umatlas       659 Jan  9 08:20 n0ONDmCi7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDms4kKDml7yTDo.diag
[2026-01-09 08:20:26] -rw-r--r--. 1 boincer umatlas     21205 Jan  9 08:20 stderr.txt
[2026-01-09 08:20:26] HITS file was successfully produced:
[2026-01-09 08:20:26] -rw-------. 1 boincer umatlas 226139733 Jan  9 08:16 shared/HITS.pool.root.1
[2026-01-09 08:20:26]  *** Contents of shared directory: ***
[2026-01-09 08:20:26] total 447732
[2026-01-09 08:20:26] -rw-r--r--. 2 boincer umatlas 227415352 Jan  9 00:04 ATLAS.root_0
[2026-01-09 08:20:26] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:04 start_atlas.sh
[2026-01-09 08:20:26] -rw-r--r--. 2 boincer umatlas    592393 Jan  9 00:04 input.tar.gz
[2026-01-09 08:20:26] -rw-------. 1 boincer umatlas 226139733 Jan  9 08:16 HITS.pool.root.1
[2026-01-09 08:20:26] -rw-------. 1 boincer umatlas   4300800 Jan  9 08:20 result.tar.gz
08:20:27 (685225): run_atlas exited; CPU time 62962.595732
08:20:27 (685225): called boinc_finish(0)

</stderr_txt>
]]>

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