Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:50 (1885876): wrapper (7.7.26015): starting
00:03:50 (1885876): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:03:50] Arguments: --nthreads 12
[2026-01-09 00:03:50] Threads: 12
[2026-01-09 00:03:50] Checking for CVMFS
[2026-01-09 00:03:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:03:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:03:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:03:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:03:52] 2.13.3.0 12359 92967 391788 154931 1 535 31341130 32935936 16890 16776704 0 426023461 99.576 529971332 32980 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:03:52] CVMFS is ok
[2026-01-09 00:03:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:03:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:03:52] Further information can be found at the LHC@home message board.
[2026-01-09 00:03:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:03:52] Checking for apptainer binary...
[2026-01-09 00:03:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:03:52] Running /usr/bin/apptainer --version
[2026-01-09 00:03:52] apptainer version 1.4.5-2.el9
[2026-01-09 00:03:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:03:53] c6-12-29-3.aglt2.org
[2026-01-09 00:03:53] apptainer works
[2026-01-09 00:03:53] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:03:53] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:03:53] Starting ATLAS job with PandaID=6963152400
[2026-01-09 00:03:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:48:36]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:48:36] 2026-01-09 15:47:55,679 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:48:36] 2026-01-09 15:47:58,204 | INFO     | monitor loop #2211: job 0:6963152400 is in state 'finished'
[2026-01-09 10:48:36] 2026-01-09 15:47:58,204 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:48:36] 2026-01-09 15:47:58,820 | INFO     | PID=1900936 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 10:48:36] 2026-01-09 15:47:58,821 | INFO     | .. there are 16 such processes running
[2026-01-09 10:48:36] 2026-01-09 15:47:59,822 | INFO     | time since job start (38580s) is within the limit (349056.0s)
[2026-01-09 10:48:36] 2026-01-09 15:48:00,709 | INFO     | monitor loop #2212: job 0:6963152400 is in state 'finished'
[2026-01-09 10:48:36] 2026-01-09 15:48:00,709 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:48:36] 2026-01-09 15:48:01,829 | INFO     | time since job start (38582s) is within the limit (349056.0s)
[2026-01-09 10:48:36] 2026-01-09 15:48:02,907 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 10:48:36] 2026-01-09 15:48:02,918 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2673.5345104166677
[2026-01-09 10:48:36] 2026-01-09 15:48:02,956 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6963152400/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 10:48:36] 2026-01-09 15:48:02,956 | INFO     | extracted standard info from prmon json
[2026-01-09 10:48:36] 2026-01-09 15:48:02,956 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:48:36] 2026-01-09 15:48:02,957 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:48:36] 2026-01-09 15:48:02,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:48:36] 2026-01-09 15:48:02,957 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:48:36] 2026-01-09 15:48:02,968 | INFO     | fitting pss+swap vs Time
[2026-01-09 10:48:36] 2026-01-09 15:48:02,969 | INFO     | sum of square deviations: 77533564687.89859
[2026-01-09 10:48:36] 2026-01-09 15:48:02,978 | INFO     | sum of deviations: 643774282424.4559
[2026-01-09 10:48:36] 2026-01-09 15:48:02,978 | INFO     | mean x: 1767954412.0984128
[2026-01-09 10:48:36] 2026-01-09 15:48:02,978 | INFO     | mean y: 2613007.557142857
[2026-01-09 10:48:36] 2026-01-09 15:48:02,979 | INFO     | intersect: -14677011069.954807
[2026-01-09 10:48:36] 2026-01-09 15:48:02,980 | INFO     | chi2: 6.355007826816669
[2026-01-09 10:48:36] 2026-01-09 15:48:02,980 | INFO     | sum of square deviations: 75702212773.59381
[2026-01-09 10:48:36] 2026-01-09 15:48:02,989 | INFO     | sum of deviations: 721249352139.9298
[2026-01-09 10:48:36] 2026-01-09 15:48:02,990 | INFO     | mean x: 1767954259.6032
[2026-01-09 10:48:36] 2026-01-09 15:48:02,990 | INFO     | mean y: 2619424.4352
[2026-01-09 10:48:36] 2026-01-09 15:48:02,990 | INFO     | intersect: -16841483510.381863
[2026-01-09 10:48:36] 2026-01-09 15:48:02,991 | INFO     | chi2: 4.936529003535474
[2026-01-09 10:48:36] 2026-01-09 15:48:02,991 | INFO     | current chi2=4.936529003535474 (change=22.320646361685675 %)
[2026-01-09 10:48:36] 2026-01-09 15:48:02,991 | INFO     | right removable region: 624
[2026-01-09 10:48:36] 2026-01-09 15:48:02,992 | INFO     | sum of square deviations: 75702020989.79848
[2026-01-09 10:48:36] 2026-01-09 15:48:03,001 | INFO     | sum of deviations: 453164970185.3292
[2026-01-09 10:48:36] 2026-01-09 15:48:03,001 | INFO     | mean x: 1767954564.6016
[2026-01-09 10:48:36] 2026-01-09 15:48:03,001 | INFO     | mean y: 2628865.2704
[2026-01-09 10:48:36] 2026-01-09 15:48:03,002 | INFO     | intersect: -10580643114.544594
[2026-01-09 10:48:36] 2026-01-09 15:48:03,002 | INFO     | chi2: 3.3570953285462197
[2026-01-09 10:48:36] 2026-01-09 15:48:03,003 | INFO     | current chi2=3.3570953285462197 (change=47.17401740435235 %)
[2026-01-09 10:48:36] 2026-01-09 15:48:03,003 | INFO     | sum of square deviations: 73899509722.9742
[2026-01-09 10:48:36] 2026-01-09 15:48:03,012 | INFO     | sum of deviations: 358387145016.1644
[2026-01-09 10:48:36] 2026-01-09 15:48:03,013 | INFO     | mean x: 1767954717.1064515
[2026-01-09 10:48:36] 2026-01-09 15:48:03,013 | INFO     | mean y: 2636881.6338709677
[2026-01-09 10:48:36] 2026-01-09 15:48:03,013 | INFO     | intersect: -8571333987.142566
[2026-01-09 10:48:36] 2026-01-09 15:48:03,014 | INFO     | chi2: 2.708617108331911
[2026-01-09 10:48:36] 2026-01-09 15:48:03,014 | INFO     | current chi2=2.708617108331911 (change=19.31664599155516 %)
[2026-01-09 10:48:36] 2026-01-09 15:48:03,014 | INFO     | left removable region: 20
[2026-01-09 10:48:36] 2026-01-09 15:48:03,015 | INFO     | sum of square deviations: 68324429784.17705
[2026-01-09 10:48:36] 2026-01-09 15:48:03,023 | INFO     | sum of deviations: 292308793446.9499
[2026-01-09 10:48:36] 2026-01-09 15:48:03,024 | INFO     | mean x: 1767954839.1208608
[2026-01-09 10:48:36] 2026-01-09 15:48:03,024 | INFO     | mean y: 2656198.4801324503
[2026-01-09 10:48:36] 2026-01-09 15:48:03,024 | INFO     | intersect: -7561091461.391243
[2026-01-09 10:48:36] 2026-01-09 15:48:03,025 | INFO     | chi2: 0.5306345769987678
[2026-01-09 10:48:36] 2026-01-09 15:48:03,025 | INFO     | current memory leak: 4.28 B/s (using 604 data points, chi2=0.53)
[2026-01-09 10:48:36] 2026-01-09 15:48:03,026 | INFO     | could have reported an average CPU frequency of 2599 MHz (24 samples)
[2026-01-09 10:48:36] 2026-01-09 15:48:03,026 | INFO     | ..............................
[2026-01-09 10:48:36] 2026-01-09 15:48:03,026 | INFO     | . Timing measurements:
[2026-01-09 10:48:36] 2026-01-09 15:48:03,026 | INFO     | . get job = 0 s
[2026-01-09 10:48:36] 2026-01-09 15:48:03,026 | INFO     | . initial setup = 5 s
[2026-01-09 10:48:36] 2026-01-09 15:48:03,026 | INFO     | . payload setup = 37 s
[2026-01-09 10:48:36] 2026-01-09 15:48:03,026 | INFO     | . stage-in = 0 s
[2026-01-09 10:48:36] 2026-01-09 15:48:03,027 | INFO     | . payload execution = 38450 s
[2026-01-09 10:48:36] 2026-01-09 15:48:03,027 | INFO     | . stage-out = 4 s
[2026-01-09 10:48:36] 2026-01-09 15:48:03,027 | INFO     | . log creation = 1 s
[2026-01-09 10:48:36] 2026-01-09 15:48:03,027 | INFO     | ..............................
[2026-01-09 10:48:36] 2026-01-09 15:48:03,513 | INFO     | 
[2026-01-09 10:48:36] 2026-01-09 15:48:03,513 | INFO     | job summary report
[2026-01-09 10:48:36] 2026-01-09 15:48:03,513 | INFO     | --------------------------------------------------
[2026-01-09 10:48:36] 2026-01-09 15:48:03,513 | INFO     | PanDA job id: 6963152400
[2026-01-09 10:48:36] 2026-01-09 15:48:03,513 | INFO     | task id: 47898826
[2026-01-09 10:48:36] 2026-01-09 15:48:03,513 | INFO     | errors: (none)
[2026-01-09 10:48:36] 2026-01-09 15:48:03,514 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:48:36] 2026-01-09 15:48:03,514 | INFO     | pilot state: finished 
[2026-01-09 10:48:36] 2026-01-09 15:48:03,514 | INFO     | transexitcode: 0
[2026-01-09 10:48:36] 2026-01-09 15:48:03,514 | INFO     | exeerrorcode: 0
[2026-01-09 10:48:36] 2026-01-09 15:48:03,514 | INFO     | exeerrordiag: 
[2026-01-09 10:48:36] 2026-01-09 15:48:03,514 | INFO     | exitcode: 0
[2026-01-09 10:48:36] 2026-01-09 15:48:03,514 | INFO     | exitmsg: OK
[2026-01-09 10:48:36] 2026-01-09 15:48:03,514 | INFO     | cpuconsumptiontime: 62093 s
[2026-01-09 10:48:36] 2026-01-09 15:48:03,514 | INFO     | nevents: 400
[2026-01-09 10:48:36] 2026-01-09 15:48:03,514 | INFO     | neventsw: 0
[2026-01-09 10:48:36] 2026-01-09 15:48:03,514 | INFO     | pid: 1951112
[2026-01-09 10:48:36] 2026-01-09 15:48:03,514 | INFO     | pgrp: 1951112
[2026-01-09 10:48:36] 2026-01-09 15:48:03,514 | INFO     | corecount: 12
[2026-01-09 10:48:36] 2026-01-09 15:48:03,515 | INFO     | event service: False
[2026-01-09 10:48:36] 2026-01-09 15:48:03,515 | INFO     | sizes: {0: 2283140, 1: 2283825, 2: 2284024, 13: 2284024, 24: 2284080, 33: 2284370, 35: 2284554, 38490: 2325465, 38491: 2325464, 38497: 2334574, 38518: 2334712}
[2026-01-09 10:48:36] 2026-01-09 15:48:03,515 | INFO     | --------------------------------------------------
[2026-01-09 10:48:36] 2026-01-09 15:48:03,515 | INFO     | 
[2026-01-09 10:48:36] 2026-01-09 15:48:03,515 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-01-09 10:48:36] 2026-01-09 15:48:03,583 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,583 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,583 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,583 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,585 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:48:36] 2026-01-09 15:48:03,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,585 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:48:36] 2026-01-09 15:48:03,585 | INFO     | job 6963152400 has completed (purged errors)
[2026-01-09 10:48:36] 2026-01-09 15:48:03,585 | INFO     | overall cleanup function is called
[2026-01-09 10:48:36] 2026-01-09 15:48:04,603 | INFO     | --- collectZombieJob: --- 10, [1951112]
[2026-01-09 10:48:36] 2026-01-09 15:48:04,603 | INFO     | zombie collector waiting for pid 1951112
[2026-01-09 10:48:36] 2026-01-09 15:48:04,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:48:36] 2026-01-09 15:48:04,603 | INFO     | collected zombie processes
[2026-01-09 10:48:36] 2026-01-09 15:48:04,603 | INFO     | will attempt to kill all subprocesses of pid=1951112
[2026-01-09 10:48:36] 2026-01-09 15:48:05,320 | INFO     | process IDs to be killed: [1951112] (in reverse order)
[2026-01-09 10:48:36] 2026-01-09 15:48:05,520 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:48:36] 2026-01-09 15:48:05,520 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:48:36] 2026-01-09 15:48:05,540 | INFO     | did not find any defunct processes belonging to 1951112
[2026-01-09 10:48:36] 2026-01-09 15:48:05,607 | INFO     | did not find any defunct processes belonging to 1951112
[2026-01-09 10:48:36] 2026-01-09 15:48:05,607 | INFO     | ready for new job
[2026-01-09 10:48:36] 2026-01-09 15:48:05,607 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:48:36] 2026-01-09 15:48:05,619 | INFO     | ***************************************
[2026-01-09 10:48:36] 2026-01-09 15:48:05,619 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:48:36] 2026-01-09 15:48:05,619 | INFO     | ***************************************
[2026-01-09 10:48:36] 2026-01-09 15:48:05,619 | INFO     | 
[2026-01-09 10:48:36] 2026-01-09 15:48:05,625 | INFO     | architecture information:
[2026-01-09 10:48:36] 2026-01-09 15:48:05,627 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:48:36] 2026-01-09 15:48:05,646 | INFO     | cat /etc/os-release:
[2026-01-09 10:48:36] NAME="CentOS Linux"
[2026-01-09 10:48:36] VERSION="7 (Core)"
[2026-01-09 10:48:36] ID="centos"
[2026-01-09 10:48:36] ID_LIKE="rhel fedora"
[2026-01-09 10:48:36] VERSION_ID="7"
[2026-01-09 10:48:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:48:36] ANSI_COLOR="0;31"
[2026-01-09 10:48:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:48:36] HOME_URL="https://www.centos.org/"
[2026-01-09 10:48:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:48:36] 
[2026-01-09 10:48:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:48:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:48:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:48:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:48:36] 
[2026-01-09 10:48:36] 2026-01-09 15:48:05,646 | INFO     | ***************************************
[2026-01-09 10:48:36] 2026-01-09 15:48:06,150 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-01-09 10:48:36] 2026-01-09 15:48:06,210 | INFO     | sufficient remaining disk space (94679072768 B)
[2026-01-09 10:48:36] 2026-01-09 15:48:06,215 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:48:36] 2026-01-09 15:48:06,215 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:48:36] 2026-01-09 15:48:06,215 | INFO     | update_server=False
[2026-01-09 10:48:36] 2026-01-09 15:48:06,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:48:36] 2026-01-09 15:48:06,222 | INFO     | all data control threads have been joined
[2026-01-09 10:48:36] 2026-01-09 15:48:06,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:48:36] 2026-01-09 15:48:06,407 | INFO     | all payload control threads have been joined
[2026-01-09 10:48:36] 2026-01-09 15:48:06,732 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:48:36] 2026-01-09 15:48:06,732 | INFO     | aborting loop
[2026-01-09 10:48:36] 2026-01-09 15:48:07,221 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:48:36] 2026-01-09 15:48:07,228 | INFO     | [data] control thread has finished
[2026-01-09 10:48:36] 2026-01-09 15:48:07,232 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:48:36] 2026-01-09 15:48:07,413 | INFO     | [payload] control thread has finished
[2026-01-09 10:48:36] 2026-01-09 15:48:07,490 | INFO     | all job control threads have been joined
[2026-01-09 10:48:36] 2026-01-09 15:48:07,511 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:48:36] 2026-01-09 15:48:07,649 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:48:36] 2026-01-09 15:48:07,738 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:48:36] 2026-01-09 15:48:07,947 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:48:36] 2026-01-09 15:48:08,016 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:48:36] 2026-01-09 15:48:08,075 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:48:36] 2026-01-09 15:48:08,216 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:48:36] 2026-01-09 15:48:08,223 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:48:36] 2026-01-09 15:48:08,299 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:48:36] 2026-01-09 15:48:08,299 | INFO     | [job] validate thread has finished
[2026-01-09 10:48:36] 2026-01-09 15:48:08,496 | INFO     | [job] control thread has finished
[2026-01-09 10:48:36] 2026-01-09 15:48:08,503 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:48:36] 2026-01-09 15:48:09,229 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:48:36] 2026-01-09 15:48:09,518 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:48:36] 2026-01-09 15:48:10,242 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:48:36] 2026-01-09 15:48:11,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140661504718656)>', '<ExcThread(monitor, started 140661135218432)>']
[2026-01-09 10:48:36] 2026-01-09 15:48:16,163 | INFO     | all workflow threads have been joined
[2026-01-09 10:48:36] 2026-01-09 15:48:16,163 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:48:36] 2026-01-09 15:48:16,163 | INFO     | traces error code: 0
[2026-01-09 10:48:36] 2026-01-09 15:48:16,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:48:36] 2026-01-09 15:48:35,483 | INFO     | PID=1900936 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 10:48:36] 2026-01-09 15:48:35,483 | INFO     | .. there are 16 such processes running
[2026-01-09 10:48:36] 2026-01-09 15:48:35,484 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:48:36] 2026-01-09 15:48:35,484 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:48:36] 2026-01-09 15:48:35,484 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:48:36] 2026-01-09 15:48:35,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:48:36] 2026-01-09 15:48:35,484 | INFO     | [monitor] control thread has ended
[2026-01-09 10:48:36] 2026-01-09 15:48:35,675 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:48:36] 2026-01-09 15:48:35,678 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:48:36] 2026-01-09 15:48:35,681 [wrapper] pilotpid: 1900936
[2026-01-09 10:48:36] 2026-01-09 15:48:35,684 [wrapper] Pilot exit status: 0
[2026-01-09 10:48:36] 2026-01-09 15:48:35,697 [wrapper] pandaids: 6963152400
[2026-01-09 10:48:36] 2026-01-09 15:48:36,351 [wrapper] cleanup supervisor_pilot 3527854 1900937
[2026-01-09 10:48:36] 2026-01-09 15:48:36,361 [wrapper] Test setup, not cleaning
[2026-01-09 10:48:36] 2026-01-09 15:48:36,395 [wrapper] apfmon messages muted
[2026-01-09 10:48:36] 2026-01-09 15:48:36,407 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:48:36] 2026-01-09 15:48:36,448 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:48:37]  *** Error codes and diagnostics ***
[2026-01-09 10:48:37]     "exeErrorCode": 0,
[2026-01-09 10:48:37]     "exeErrorDiag": "",
[2026-01-09 10:48:37]     "pilotErrorCode": 0,
[2026-01-09 10:48:37]     "pilotErrorDiag": "",
[2026-01-09 10:48:37]  *** Listing of results directory ***
[2026-01-09 10:48:37] total 446156
[2026-01-09 10:48:37] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 10:48:37] -rwx------. 1 boincer umatlas     36322 Jan  8 11:06 runpilot2-wrapper.sh
[2026-01-09 10:48:37] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 10:48:37] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:48:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:03 run_atlas
[2026-01-09 10:48:37] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:03 job.xml
[2026-01-09 10:48:37] -rw-r--r--. 2 boincer umatlas 225403784 Jan  9 00:03 EVNT.47898824._000869.pool.root.1
[2026-01-09 10:48:37] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:03 start_atlas.sh
[2026-01-09 10:48:37] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:03 shared
[2026-01-09 10:48:37] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 00:03 input.tar.gz
[2026-01-09 10:48:37] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:03 boinc_lockfile
[2026-01-09 10:48:37] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 00:03 pandaJob.out
[2026-01-09 10:48:37] -rw-------. 1 boincer umatlas        57 Jan  9 00:03 setup.sh.local
[2026-01-09 10:48:37] -rw-------. 1 boincer umatlas    989771 Jan  9 00:04 agis_schedconf.cvmfs.json
[2026-01-09 10:48:37] drwx------. 5 boincer umatlas      4096 Jan  9 00:05 pilot3
[2026-01-09 10:48:37] -rw-r--r--. 1 boincer umatlas      6878 Jan  9 10:40 init_data.xml
[2026-01-09 10:48:37] -rw-------. 1 boincer umatlas 216561490 Jan  9 10:44 HITS.47898826._029201.pool.root.1
[2026-01-09 10:48:37] -rw-r--r--. 1 boincer umatlas       531 Jan  9 10:44 boinc_task_state.xml
[2026-01-09 10:48:37] -rw-------. 1 boincer umatlas      1039 Jan  9 10:47 memory_monitor_summary.json
[2026-01-09 10:48:37] -rw-------. 1 boincer umatlas        95 Jan  9 10:47 pilot_heartbeat.json
[2026-01-09 10:48:37] -rw-------. 1 boincer umatlas   1516240 Jan  9 10:47 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:48:37] -rw-------. 1 boincer umatlas    814574 Jan  9 10:47 log.47898826._029201.job.log.tgz.1
[2026-01-09 10:48:37] -rw-------. 1 boincer umatlas      7828 Jan  9 10:48 heartbeat.json
[2026-01-09 10:48:37] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 10:48 boinc_mmap_file
[2026-01-09 10:48:37] -rw-------. 1 boincer umatlas       823 Jan  9 10:48 pilotlog.txt
[2026-01-09 10:48:37] -rw-r--r--. 1 boincer umatlas        28 Jan  9 10:48 wrapper_checkpoint.txt
[2026-01-09 10:48:37] -rw-------. 1 boincer umatlas   4678541 Jan  9 10:48 log.47898826._029201.job.log.1
[2026-01-09 10:48:37] -rw-------. 1 boincer umatlas       357 Jan  9 10:48 output.list
[2026-01-09 10:48:37] -rw-r--r--. 1 boincer umatlas       620 Jan  9 10:48 runtime_log
[2026-01-09 10:48:37] -rw-------. 1 boincer umatlas   5509120 Jan  9 10:48 result.tar.gz
[2026-01-09 10:48:37] -rw-r--r--. 1 boincer umatlas      9355 Jan  9 10:48 runtime_log.err
[2026-01-09 10:48:37] -rw-------. 1 boincer umatlas       660 Jan  9 10:48 CZSMDmCi7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm93kKDm0JmCEo.diag
[2026-01-09 10:48:37] -rw-r--r--. 1 boincer umatlas     21522 Jan  9 10:48 stderr.txt
[2026-01-09 10:48:37] HITS file was successfully produced:
[2026-01-09 10:48:37] -rw-------. 1 boincer umatlas 216561490 Jan  9 10:44 shared/HITS.pool.root.1
[2026-01-09 10:48:37]  *** Contents of shared directory: ***
[2026-01-09 10:48:37] total 437596
[2026-01-09 10:48:37] -rw-r--r--. 2 boincer umatlas 225403784 Jan  9 00:03 ATLAS.root_0
[2026-01-09 10:48:37] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:03 start_atlas.sh
[2026-01-09 10:48:37] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 00:03 input.tar.gz
[2026-01-09 10:48:37] -rw-------. 1 boincer umatlas 216561490 Jan  9 10:44 HITS.pool.root.1
[2026-01-09 10:48:37] -rw-------. 1 boincer umatlas   5509120 Jan  9 10:48 result.tar.gz
10:48:38 (1885876): run_atlas exited; CPU time 63771.316767
10:48:38 (1885876): called boinc_finish(0)

</stderr_txt>
]]>

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