Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:51 (2465733): wrapper (7.7.26015): starting
00:10:51 (2465733): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:10:52] Arguments: --nthreads 8
[2026-01-09 00:10:52] Threads: 8
[2026-01-09 00:10:52] Checking for CVMFS
[2026-01-09 00:10:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:10:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:10:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:10:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:10:54] 2.13.3.0 9728 20839 170812 154931 0 332 35051920 39288832 10078 16776704 0 9555725 99.507 11335321 36089 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:10:54] CVMFS is ok
[2026-01-09 00:10:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:10:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:10:54] Further information can be found at the LHC@home message board.
[2026-01-09 00:10:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:10:54] Checking for apptainer binary...
[2026-01-09 00:10:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:10:54] Running /usr/bin/apptainer --version
[2026-01-09 00:10:54] apptainer version 1.4.5-2.el9
[2026-01-09 00:10:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:10:55] c-211-5.aglt2.org
[2026-01-09 00:10:55] apptainer works
[2026-01-09 00:10:55] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:10:55] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:10:56] Starting ATLAS job with PandaID=6963152634
[2026-01-09 00:10:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:26:19]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:26:19] 2026-01-09 11:15:55,479 | INFO     | monitor loop #1426: job 0:6963152634 is in state 'finished'
[2026-01-09 14:26:19] 2026-01-09 11:15:55,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:26:19] 2026-01-09 11:15:56,190 | INFO     | time since job start (21818s) is within the limit (349056.0s)
[2026-01-09 14:26:19] 2026-01-09 11:15:57,983 | INFO     | monitor loop #1427: job 0:6963152634 is in state 'finished'
[2026-01-09 14:26:19] 2026-01-09 11:15:57,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:26:19] 2026-01-09 11:15:58,198 | INFO     | time since job start (21820s) is within the limit (349056.0s)
[2026-01-09 14:26:19] 2026-01-09 11:16:00,205 | INFO     | time since job start (21822s) is within the limit (349056.0s)
[2026-01-09 14:26:19] 2026-01-09 11:16:00,491 | INFO     | monitor loop #1428: job 0:6963152634 is in state 'finished'
[2026-01-09 14:26:19] 2026-01-09 11:16:00,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:26:19] 2026-01-09 11:16:01,117 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 14:26:19] 2026-01-09 11:16:01,128 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8592249999997
[2026-01-09 14:26:19] 2026-01-09 11:16:01,143 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963152634/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:26:19] 2026-01-09 11:16:01,144 | INFO     | extracted standard info from prmon json
[2026-01-09 14:26:19] 2026-01-09 11:16:01,144 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:26:19] 2026-01-09 11:16:01,144 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:26:19] 2026-01-09 11:16:01,149 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:26:19] 2026-01-09 11:16:01,149 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:26:19] 2026-01-09 11:16:01,165 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:26:19] 2026-01-09 11:16:01,166 | INFO     | sum of square deviations: 13996922819.235899
[2026-01-09 14:26:19] 2026-01-09 11:16:01,175 | INFO     | sum of deviations: -30086576152.089897
[2026-01-09 14:26:19] 2026-01-09 11:16:01,176 | INFO     | mean x: 1767946505.3033707
[2026-01-09 14:26:19] 2026-01-09 11:16:01,176 | INFO     | mean y: 2520880.241573034
[2026-01-09 14:26:19] 2026-01-09 11:16:01,176 | INFO     | intersect: 3802745961.966702
[2026-01-09 14:26:19] 2026-01-09 11:16:01,177 | INFO     | chi2: 2.8424231136114626
[2026-01-09 14:26:19] 2026-01-09 11:16:01,177 | INFO     | sum of square deviations: 13415490204.666784
[2026-01-09 14:26:19] 2026-01-09 11:16:01,185 | INFO     | sum of deviations: -7068250092.666675
[2026-01-09 14:26:19] 2026-01-09 11:16:01,186 | INFO     | mean x: 1767946352.7777777
[2026-01-09 14:26:19] 2026-01-09 11:16:01,186 | INFO     | mean y: 2526853.376068376
[2026-01-09 14:26:19] 2026-01-09 11:16:01,186 | INFO     | intersect: 934008803.0631706
[2026-01-09 14:26:19] 2026-01-09 11:16:01,191 | INFO     | chi2: 2.167460636748115
[2026-01-09 14:26:19] 2026-01-09 11:16:01,191 | INFO     | current chi2=2.167460636748115 (change=23.7460240747117 %)
[2026-01-09 14:26:19] 2026-01-09 11:16:01,191 | INFO     | right removable region: 350
[2026-01-09 14:26:19] 2026-01-09 11:16:01,192 | INFO     | sum of square deviations: 13415488187.743526
[2026-01-09 14:26:19] 2026-01-09 11:16:01,200 | INFO     | sum of deviations: -99811135403.44443
[2026-01-09 14:26:19] 2026-01-09 11:16:01,200 | INFO     | mean x: 1767946657.8290598
[2026-01-09 14:26:19] 2026-01-09 11:16:01,200 | INFO     | mean y: 2539070.925925926
[2026-01-09 14:26:19] 2026-01-09 11:16:01,201 | INFO     | intersect: 13156049459.899992
[2026-01-09 14:26:19] 2026-01-09 11:16:01,201 | INFO     | chi2: 0.8408253459702966
[2026-01-09 14:26:19] 2026-01-09 11:16:01,201 | INFO     | current chi2=0.8408253459702966 (change=70.41871275448574 %)
[2026-01-09 14:26:19] 2026-01-09 11:16:01,202 | INFO     | sum of square deviations: 12850379443.274527
[2026-01-09 14:26:19] 2026-01-09 11:16:01,214 | INFO     | sum of deviations: -99318145528.17923
[2026-01-09 14:26:19] 2026-01-09 11:16:01,215 | INFO     | mean x: 1767946810.3554914
[2026-01-09 14:26:19] 2026-01-09 11:16:01,215 | INFO     | mean y: 2538934.936416185
[2026-01-09 14:26:19] 2026-01-09 11:16:01,215 | INFO     | intersect: 13666664525.318472
[2026-01-09 14:26:19] 2026-01-09 11:16:01,215 | INFO     | chi2: 0.8312903721102498
[2026-01-09 14:26:19] 2026-01-09 11:16:01,216 | INFO     | current chi2=0.8312903721102498 (change=1.134001716972932 %)
[2026-01-09 14:26:19] 2026-01-09 11:16:01,216 | INFO     | left removable region: 20
[2026-01-09 14:26:19] 2026-01-09 11:16:01,216 | INFO     | sum of square deviations: 11148951974.363665
[2026-01-09 14:26:19] 2026-01-09 11:16:01,224 | INFO     | sum of deviations: -62233398452.72722
[2026-01-09 14:26:19] 2026-01-09 11:16:01,224 | INFO     | mean x: 1767946932.3636363
[2026-01-09 14:26:19] 2026-01-09 11:16:01,224 | INFO     | mean y: 2541468.4060606062
[2026-01-09 14:26:19] 2026-01-09 11:16:01,225 | INFO     | intersect: 9871213083.286055
[2026-01-09 14:26:19] 2026-01-09 11:16:01,225 | INFO     | chi2: 0.13230457888790215
[2026-01-09 14:26:19] 2026-01-09 11:16:01,225 | INFO     | current memory leak: -5.58 B/s (using 330 data points, chi2=0.13)
[2026-01-09 14:26:19] 2026-01-09 11:16:01,230 | INFO     | could have reported an average CPU frequency of 2599 MHz (15 samples)
[2026-01-09 14:26:19] 2026-01-09 11:16:01,231 | INFO     | ..............................
[2026-01-09 14:26:19] 2026-01-09 11:16:01,231 | INFO     | . Timing measurements:
[2026-01-09 14:26:19] 2026-01-09 11:16:01,231 | INFO     | . get job = 0 s
[2026-01-09 14:26:19] 2026-01-09 11:16:01,231 | INFO     | . initial setup = 7 s
[2026-01-09 14:26:19] 2026-01-09 11:16:01,231 | INFO     | . payload setup = 42 s
[2026-01-09 14:26:19] 2026-01-09 11:16:01,231 | INFO     | . stage-in = 0 s
[2026-01-09 14:26:19] 2026-01-09 11:16:01,232 | INFO     | . payload execution = 21690 s
[2026-01-09 14:26:19] 2026-01-09 11:16:01,232 | INFO     | . stage-out = 3 s
[2026-01-09 14:26:19] 2026-01-09 11:16:01,232 | INFO     | . log creation = 0 s
[2026-01-09 14:26:19] 2026-01-09 11:16:01,232 | INFO     | ..............................
[2026-01-09 14:26:19] 2026-01-09 11:16:01,899 | INFO     | 
[2026-01-09 14:26:19] 2026-01-09 11:16:01,899 | INFO     | job summary report
[2026-01-09 14:26:19] 2026-01-09 11:16:01,900 | INFO     | --------------------------------------------------
[2026-01-09 14:26:19] 2026-01-09 11:16:01,900 | INFO     | PanDA job id: 6963152634
[2026-01-09 14:26:19] 2026-01-09 11:16:01,900 | INFO     | task id: 47898826
[2026-01-09 14:26:19] 2026-01-09 11:16:01,900 | INFO     | errors: (none)
[2026-01-09 14:26:19] 2026-01-09 11:16:01,900 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:26:19] 2026-01-09 11:16:01,900 | INFO     | pilot state: finished 
[2026-01-09 14:26:19] 2026-01-09 11:16:01,900 | INFO     | transexitcode: 0
[2026-01-09 14:26:19] 2026-01-09 11:16:01,900 | INFO     | exeerrorcode: 0
[2026-01-09 14:26:19] 2026-01-09 11:16:01,900 | INFO     | exeerrordiag: 
[2026-01-09 14:26:19] 2026-01-09 11:16:01,900 | INFO     | exitcode: 0
[2026-01-09 14:26:19] 2026-01-09 11:16:01,900 | INFO     | exitmsg: OK
[2026-01-09 14:26:19] 2026-01-09 11:16:01,901 | INFO     | cpuconsumptiontime: 64450 s
[2026-01-09 14:26:19] 2026-01-09 11:16:01,901 | INFO     | nevents: 400
[2026-01-09 14:26:19] 2026-01-09 11:16:01,901 | INFO     | neventsw: 0
[2026-01-09 14:26:19] 2026-01-09 11:16:01,901 | INFO     | pid: 2478581
[2026-01-09 14:26:19] 2026-01-09 11:16:01,901 | INFO     | pgrp: 2478581
[2026-01-09 14:26:19] 2026-01-09 11:16:01,901 | INFO     | corecount: 8
[2026-01-09 14:26:19] 2026-01-09 11:16:01,901 | INFO     | event service: False
[2026-01-09 14:26:19] 2026-01-09 11:16:01,901 | INFO     | sizes: {0: 2283741, 1: 2283825, 2: 2284024, 13: 2284024, 24: 2284080, 30: 2284370, 35: 2284526, 21737: 2319039, 21742: 2328037, 21744: 2328093, 21758: 2328287}
[2026-01-09 14:26:19] 2026-01-09 11:16:01,901 | INFO     | --------------------------------------------------
[2026-01-09 14:26:19] 2026-01-09 11:16:01,902 | INFO     | 
[2026-01-09 14:26:19] 2026-01-09 11:16:01,902 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 14:26:19] 2026-01-09 11:16:02,024 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,024 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,024 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,024 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,024 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,024 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,024 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,025 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,025 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,025 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,025 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,025 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,025 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,025 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,026 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:26:19] 2026-01-09 11:16:02,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,026 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:26:19] 2026-01-09 11:16:02,026 | INFO     | job 6963152634 has completed (purged errors)
[2026-01-09 14:26:19] 2026-01-09 11:16:02,026 | INFO     | overall cleanup function is called
[2026-01-09 14:26:19] 2026-01-09 11:16:03,039 | INFO     | --- collectZombieJob: --- 10, [2478581]
[2026-01-09 14:26:19] 2026-01-09 11:16:03,040 | INFO     | zombie collector waiting for pid 2478581
[2026-01-09 14:26:19] 2026-01-09 11:16:03,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:26:19] 2026-01-09 11:16:03,040 | INFO     | collected zombie processes
[2026-01-09 14:26:19] 2026-01-09 11:16:03,040 | INFO     | will attempt to kill all subprocesses of pid=2478581
[2026-01-09 14:26:19] 2026-01-09 11:16:03,738 | INFO     | process IDs to be killed: [2478581] (in reverse order)
[2026-01-09 14:26:19] 2026-01-09 11:16:03,867 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:26:19] 2026-01-09 11:16:03,868 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:26:19] 2026-01-09 11:16:03,888 | INFO     | did not find any defunct processes belonging to 2478581
[2026-01-09 14:26:19] 2026-01-09 11:16:03,905 | INFO     | did not find any defunct processes belonging to 2478581
[2026-01-09 14:26:19] 2026-01-09 11:16:03,905 | INFO     | ready for new job
[2026-01-09 14:26:19] 2026-01-09 11:16:03,905 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:26:19] 2026-01-09 11:16:03,914 | INFO     | ***************************************
[2026-01-09 14:26:19] 2026-01-09 11:16:03,914 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:26:19] 2026-01-09 11:16:03,915 | INFO     | ***************************************
[2026-01-09 14:26:19] 2026-01-09 11:16:03,915 | INFO     | 
[2026-01-09 14:26:19] 2026-01-09 11:16:03,920 | INFO     | architecture information:
[2026-01-09 14:26:19] 2026-01-09 11:16:03,921 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:26:19] 2026-01-09 11:16:03,960 | INFO     | cat /etc/os-release:
[2026-01-09 14:26:19] NAME="CentOS Linux"
[2026-01-09 14:26:19] VERSION="7 (Core)"
[2026-01-09 14:26:19] ID="centos"
[2026-01-09 14:26:19] ID_LIKE="rhel fedora"
[2026-01-09 14:26:19] VERSION_ID="7"
[2026-01-09 14:26:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:26:19] ANSI_COLOR="0;31"
[2026-01-09 14:26:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:26:19] HOME_URL="https://www.centos.org/"
[2026-01-09 14:26:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:26:19] 
[2026-01-09 14:26:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:26:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:26:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:26:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:26:19] 
[2026-01-09 14:26:19] 2026-01-09 11:16:03,960 | INFO     | ***************************************
[2026-01-09 14:26:19] 2026-01-09 11:16:04,464 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 14:26:19] 2026-01-09 11:16:04,604 | INFO     | sufficient remaining disk space (52126810112 B)
[2026-01-09 14:26:19] 2026-01-09 11:16:04,604 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:26:19] 2026-01-09 11:16:04,605 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:26:19] 2026-01-09 11:16:04,605 | INFO     | update_server=False
[2026-01-09 14:26:19] 2026-01-09 11:16:04,605 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:26:19] 2026-01-09 11:16:04,605 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:26:19] 2026-01-09 11:16:04,605 | INFO     | aborting loop
[2026-01-09 14:26:19] 2026-01-09 11:16:05,025 | INFO     | all payload control threads have been joined
[2026-01-09 14:26:19] 2026-01-09 11:16:05,432 | INFO     | all data control threads have been joined
[2026-01-09 14:26:19] 2026-01-09 11:16:05,610 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:26:19] 2026-01-09 11:16:05,620 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:26:19] 2026-01-09 11:16:05,778 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:26:19] 2026-01-09 11:16:05,896 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:26:19] 2026-01-09 11:16:06,031 | INFO     | [payload] control thread has finished
[2026-01-09 14:26:19] 2026-01-09 11:16:06,077 | INFO     | all job control threads have been joined
[2026-01-09 14:26:19] 2026-01-09 11:16:06,116 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:26:19] 2026-01-09 11:16:06,125 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:26:19] 2026-01-09 11:16:06,317 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:26:19] 2026-01-09 11:16:06,445 | INFO     | [data] control thread has finished
[2026-01-09 14:26:19] 2026-01-09 11:16:06,529 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:26:19] 2026-01-09 11:16:06,612 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:26:19] 2026-01-09 11:16:06,730 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:26:19] 2026-01-09 11:16:06,758 | INFO     | [job] validate thread has finished
[2026-01-09 14:26:19] 2026-01-09 11:16:07,067 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:26:19] 2026-01-09 11:16:07,083 | INFO     | [job] control thread has finished
[2026-01-09 14:26:19] 2026-01-09 11:16:07,477 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:26:19] 2026-01-09 11:16:07,535 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:26:19] 2026-01-09 11:16:07,904 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:26:19] 2026-01-09 11:16:11,487 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:26:19] 2026-01-09 11:16:33,927 | INFO     | PID=2471226 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 14:26:19] 2026-01-09 11:16:33,928 | INFO     | .. there are 9 such processes running
[2026-01-09 14:26:19] 2026-01-09 11:16:33,928 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:26:19] 2026-01-09 11:16:33,928 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:26:19] 2026-01-09 11:16:33,928 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:26:19] 2026-01-09 11:16:56,862 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:26:19] 2026-01-09 11:16:57,873 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139835383015232)>', '<ExcThread(monitor, started 139834857346816)>']
[2026-01-09 14:26:19] 2026-01-09 11:16:58,110 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:26:19] 2026-01-09 11:16:58,111 | INFO     | [monitor] control thread has ended
[2026-01-09 14:26:19] 2026-01-09 11:17:02,898 | INFO     | all workflow threads have been joined
[2026-01-09 14:26:19] 2026-01-09 11:17:02,899 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:26:19] 2026-01-09 11:17:02,899 | INFO     | traces error code: 0
[2026-01-09 14:26:19] 2026-01-09 11:17:02,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:26:19] 2026-01-09 11:17:03,001 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:26:19] 2026-01-09 11:17:03,003 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:26:19] 2026-01-09 11:17:03,005 [wrapper] pilotpid: 2471226
[2026-01-09 14:26:19] 2026-01-09 11:17:03,007 [wrapper] Pilot exit status: 0
[2026-01-09 14:26:19] 2026-01-09 11:17:03,086 [wrapper] pandaids: 6963152634
[2026-01-09 14:26:19] 2026-01-09 11:17:03,162 [wrapper] cleanup supervisor_pilot 3074764 2471228
[2026-01-09 14:26:19] 2026-01-09 11:17:03,165 [wrapper] Test setup, not cleaning
[2026-01-09 14:26:19] 2026-01-09 11:17:03,168 [wrapper] apfmon messages muted
[2026-01-09 14:26:19] 2026-01-09 11:17:03,171 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:26:19] 2026-01-09 11:17:03,173 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:26:19]  *** Error codes and diagnostics ***
[2026-01-09 14:26:19]     "exeErrorCode": 0,
[2026-01-09 14:26:19]     "exeErrorDiag": "",
[2026-01-09 14:26:19]     "pilotErrorCode": 0,
[2026-01-09 14:26:19]     "pilotErrorDiag": "",
[2026-01-09 14:26:19]  *** Listing of results directory ***
[2026-01-09 14:26:19] total 434596
[2026-01-09 14:26:19] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 14:26:19] -rwx------. 1 boincer umatlas     36322 Jan  8 11:06 runpilot2-wrapper.sh
[2026-01-09 14:26:19] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 14:26:19] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:26:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:10 run_atlas
[2026-01-09 14:26:19] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:10 job.xml
[2026-01-09 14:26:19] -rw-r--r--. 2 boincer umatlas 225896788 Jan  9 00:10 EVNT.47898824._000876.pool.root.1
[2026-01-09 14:26:19] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:10 start_atlas.sh
[2026-01-09 14:26:19] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:10 shared
[2026-01-09 14:26:19] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 00:10 input.tar.gz
[2026-01-09 14:26:19] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:10 boinc_lockfile
[2026-01-09 14:26:19] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 00:10 pandaJob.out
[2026-01-09 14:26:19] -rw-------. 1 boincer umatlas        57 Jan  9 00:10 setup.sh.local
[2026-01-09 14:26:19] -rw-------. 1 boincer umatlas    989771 Jan  9 00:12 agis_schedconf.cvmfs.json
[2026-01-09 14:26:19] drwx------. 5 boincer umatlas      4096 Jan  9 00:12 pilot3
[2026-01-09 14:26:19] -rw-------. 1 boincer umatlas 208355176 Jan  9 06:14 HITS.47898826._029392.pool.root.1
[2026-01-09 14:26:19] -rw-r--r--. 1 boincer umatlas       529 Jan  9 06:15 boinc_task_state.xml
[2026-01-09 14:26:19] -rw-------. 1 boincer umatlas      1039 Jan  9 06:15 memory_monitor_summary.json
[2026-01-09 14:26:19] -rw-------. 1 boincer umatlas   1516240 Jan  9 06:15 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:26:19] -rw-------. 1 boincer umatlas    564992 Jan  9 06:15 log.47898826._029392.job.log.tgz.1
[2026-01-09 14:26:19] -rw-------. 1 boincer umatlas        95 Jan  9 06:15 pilot_heartbeat.json
[2026-01-09 14:26:19] -rw-------. 1 boincer umatlas      7820 Jan  9 06:16 heartbeat.json
[2026-01-09 14:26:19] -rw-------. 1 boincer umatlas      4823 Jan  9 06:17 pilotlog.txt
[2026-01-09 14:26:19] -rw-------. 1 boincer umatlas   2864870 Jan  9 06:17 log.47898826._029392.job.log.1
[2026-01-09 14:26:19] -rw-------. 1 boincer umatlas       357 Jan  9 06:17 output.list
[2026-01-09 14:26:19] -rw-r--r--. 1 boincer umatlas       620 Jan  9 06:17 runtime_log
[2026-01-09 14:26:19] -rw-------. 1 boincer umatlas   3450880 Jan  9 06:17 result.tar.gz
[2026-01-09 14:26:19] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 06:17 runtime_log.err
[2026-01-09 14:26:19] -rw-------. 1 boincer umatlas       656 Jan  9 06:17 EijNDmMi7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhrfKDmjB31Uo.diag
[2026-01-09 14:26:19] -rw-r--r--. 1 boincer umatlas      6655 Jan  9 14:21 init_data.xml
[2026-01-09 14:26:19] -rw-r--r--. 1 boincer umatlas        26 Jan  9 14:25 wrapper_checkpoint.txt
[2026-01-09 14:26:19] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 14:26 boinc_mmap_file
[2026-01-09 14:26:19] -rw-r--r--. 1 boincer umatlas     21451 Jan  9 14:26 stderr.txt
[2026-01-09 14:26:19] HITS file was successfully produced:
[2026-01-09 14:26:19] -rw-------. 1 boincer umatlas 208355176 Jan  9 06:14 shared/HITS.pool.root.1
[2026-01-09 14:26:19]  *** Contents of shared directory: ***
[2026-01-09 14:26:19] total 428048
[2026-01-09 14:26:19] -rw-r--r--. 2 boincer umatlas 225896788 Jan  9 00:10 ATLAS.root_0
[2026-01-09 14:26:19] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:10 start_atlas.sh
[2026-01-09 14:26:19] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 00:10 input.tar.gz
[2026-01-09 14:26:19] -rw-------. 1 boincer umatlas 208355176 Jan  9 06:14 HITS.pool.root.1
[2026-01-09 14:26:19] -rw-------. 1 boincer umatlas   3450880 Jan  9 06:17 result.tar.gz
14:26:21 (2465733): run_atlas exited; CPU time 64979.463741
14:26:21 (2465733): called boinc_finish(0)

</stderr_txt>
]]>

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