Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:27:54 (1325185): wrapper (7.7.26015): starting
13:27:54 (1325185): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 13:27:54] Arguments: --nthreads 9
[2026-01-09 13:27:54] Threads: 9
[2026-01-09 13:27:54] Checking for CVMFS
[2026-01-09 13:27:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:27:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:27:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:27:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:27:54] 2.13.3.0 9278 93724 349604 154952 1 79 21137217 32935936 17679 16776704 0 457566003 99.753 308349265 33392 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 13:27:54] CVMFS is ok
[2026-01-09 13:27:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:27:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:27:54] Further information can be found at the LHC@home message board.
[2026-01-09 13:27:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:27:54] Checking for apptainer binary...
[2026-01-09 13:27:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:27:54] Running /usr/bin/apptainer --version
[2026-01-09 13:27:54] apptainer version 1.4.5-2.el9
[2026-01-09 13:27:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:27:54] c-4-40.aglt2.org
[2026-01-09 13:27:54] apptainer works
[2026-01-09 13:27:54] Set ATHENA_PROC_NUMBER=9
[2026-01-09 13:27:54] Set ATHENA_CORE_NUMBER=9
[2026-01-09 13:27:54] Starting ATLAS job with PandaID=6963152976
[2026-01-09 13:27:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:12:19]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:12:19] 2026-01-10 04:11:38,675 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 23:12:19] 2026-01-10 04:11:38,706 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.874525
[2026-01-09 23:12:19] 2026-01-10 04:11:38,774 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963152976/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:12:19] 2026-01-10 04:11:38,777 | INFO     | extracted standard info from prmon json
[2026-01-09 23:12:19] 2026-01-10 04:11:38,777 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:12:19] 2026-01-10 04:11:38,777 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:12:19] 2026-01-10 04:11:38,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 23:12:19] 2026-01-10 04:11:38,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 23:12:19] 2026-01-10 04:11:38,844 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:12:19] 2026-01-10 04:11:38,865 | INFO     | sum of square deviations: 58338240592.516685
[2026-01-09 23:12:19] 2026-01-10 04:11:38,898 | INFO     | sum of deviations: 38088199592.50253
[2026-01-09 23:12:19] 2026-01-10 04:11:38,898 | INFO     | mean x: 1768000762.2024434
[2026-01-09 23:12:19] 2026-01-10 04:11:38,898 | INFO     | mean y: 2569494.926701571
[2026-01-09 23:12:19] 2026-01-10 04:11:38,898 | INFO     | intersect: -1151732815.6421447
[2026-01-09 23:12:19] 2026-01-10 04:11:38,899 | INFO     | chi2: 2.634266528931243
[2026-01-09 23:12:19] 2026-01-10 04:11:38,919 | INFO     | sum of square deviations: 56824494601.48565
[2026-01-09 23:12:19] 2026-01-10 04:11:38,968 | INFO     | sum of deviations: 111549566180.50693
[2026-01-09 23:12:19] 2026-01-10 04:11:38,969 | INFO     | mean x: 1768000609.7077465
[2026-01-09 23:12:19] 2026-01-10 04:11:38,969 | INFO     | mean y: 2576856.0211267606
[2026-01-09 23:12:19] 2026-01-10 04:11:38,969 | INFO     | intersect: -3468104271.9481955
[2026-01-09 23:12:19] 2026-01-10 04:11:38,970 | INFO     | chi2: 1.247182463264256
[2026-01-09 23:12:19] 2026-01-10 04:11:38,970 | INFO     | current chi2=1.247182463264256 (change=52.6554185171895 %)
[2026-01-09 23:12:19] 2026-01-10 04:11:39,022 | INFO     | sum of square deviations: 55337167222.422905
[2026-01-09 23:12:19] 2026-01-10 04:11:39,066 | INFO     | sum of deviations: 109682468504.87566
[2026-01-09 23:12:19] 2026-01-10 04:11:39,066 | INFO     | mean x: 1768000457.2131438
[2026-01-09 23:12:19] 2026-01-10 04:11:39,067 | INFO     | mean y: 2576664.5843694494
[2026-01-09 23:12:19] 2026-01-10 04:11:39,067 | INFO     | intersect: -3501734528.025966
[2026-01-09 23:12:19] 2026-01-10 04:11:39,079 | INFO     | chi2: 1.2472757742171532
[2026-01-09 23:12:19] 2026-01-10 04:11:39,079 | INFO     | current chi2=1.2472757742171532 (change=-0.007481740294269734 %)
[2026-01-09 23:12:19] 2026-01-10 04:11:39,079 | INFO     | right removable region: 562
[2026-01-09 23:12:19] 2026-01-10 04:11:39,080 | INFO     | sum of square deviations: 56824178800.223595
[2026-01-09 23:12:19] 2026-01-10 04:11:39,190 | INFO     | sum of deviations: -38750970176.866196
[2026-01-09 23:12:19] 2026-01-10 04:11:39,190 | INFO     | mean x: 1768000914.7130282
[2026-01-09 23:12:19] 2026-01-10 04:11:39,190 | INFO     | mean y: 2577200.3873239434
[2026-01-09 23:12:19] 2026-01-10 04:11:39,190 | INFO     | intersect: 1208256757.3164794
[2026-01-09 23:12:19] 2026-01-10 04:11:39,191 | INFO     | chi2: 1.433682526865669
[2026-01-09 23:12:19] 2026-01-10 04:11:39,191 | INFO     | current chi2=1.433682526865669 (change=45.57564653690023 %)
[2026-01-09 23:12:19] 2026-01-10 04:11:39,206 | INFO     | sum of square deviations: 55336536107.80078
[2026-01-09 23:12:19] 2026-01-10 04:11:39,241 | INFO     | sum of deviations: -33713279214.9787
[2026-01-09 23:12:19] 2026-01-10 04:11:39,241 | INFO     | mean x: 1768001067.2238011
[2026-01-09 23:12:19] 2026-01-10 04:11:39,242 | INFO     | mean y: 2576679.4760213145
[2026-01-09 23:12:19] 2026-01-10 04:11:39,242 | INFO     | intersect: 1079715181.8857124
[2026-01-09 23:12:19] 2026-01-10 04:11:39,242 | INFO     | chi2: 1.418581407701018
[2026-01-09 23:12:19] 2026-01-10 04:11:39,243 | INFO     | current chi2=1.418581407701018 (change=1.0533098424283154 %)
[2026-01-09 23:12:19] 2026-01-10 04:11:39,243 | INFO     | left removable region: 20
[2026-01-09 23:12:19] 2026-01-10 04:11:39,243 | INFO     | sum of square deviations: 49372475351.87465
[2026-01-09 23:12:19] 2026-01-10 04:11:39,341 | INFO     | sum of deviations: 42897176030.287865
[2026-01-09 23:12:19] 2026-01-10 04:11:39,341 | INFO     | mean x: 1768001036.7490776
[2026-01-09 23:12:19] 2026-01-10 04:11:39,342 | INFO     | mean y: 2583522.0756457564
[2026-01-09 23:12:19] 2026-01-10 04:11:39,342 | INFO     | intersect: -1533540627.151904
[2026-01-09 23:12:19] 2026-01-10 04:11:39,343 | INFO     | chi2: 0.002860720547961212
[2026-01-09 23:12:19] 2026-01-10 04:11:39,343 | INFO     | current memory leak: 0.87 B/s (using 542 data points, chi2=0.00)
[2026-01-09 23:12:19] 2026-01-10 04:11:39,344 | INFO     | could have reported an average CPU frequency of 2600 MHz (22 samples)
[2026-01-09 23:12:19] 2026-01-10 04:11:39,344 | INFO     | ..............................
[2026-01-09 23:12:19] 2026-01-10 04:11:39,344 | INFO     | . Timing measurements:
[2026-01-09 23:12:19] 2026-01-10 04:11:39,344 | INFO     | . get job = 0 s
[2026-01-09 23:12:19] 2026-01-10 04:11:39,344 | INFO     | . initial setup = 2 s
[2026-01-09 23:12:19] 2026-01-10 04:11:39,344 | INFO     | . payload setup = 6 s
[2026-01-09 23:12:19] 2026-01-10 04:11:39,344 | INFO     | . stage-in = 0 s
[2026-01-09 23:12:19] 2026-01-10 04:11:39,344 | INFO     | . payload execution = 34915 s
[2026-01-09 23:12:19] 2026-01-10 04:11:39,345 | INFO     | . stage-out = 12 s
[2026-01-09 23:12:19] 2026-01-10 04:11:39,345 | INFO     | . log creation = 3 s
[2026-01-09 23:12:19] 2026-01-10 04:11:39,345 | INFO     | ..............................
[2026-01-09 23:12:19] 2026-01-10 04:11:40,713 | INFO     | 
[2026-01-09 23:12:19] 2026-01-10 04:11:40,713 | INFO     | job summary report
[2026-01-09 23:12:19] 2026-01-10 04:11:40,713 | INFO     | --------------------------------------------------
[2026-01-09 23:12:19] 2026-01-10 04:11:40,713 | INFO     | PanDA job id: 6963152976
[2026-01-09 23:12:19] 2026-01-10 04:11:40,714 | INFO     | task id: 47898826
[2026-01-09 23:12:19] 2026-01-10 04:11:40,714 | INFO     | errors: (none)
[2026-01-09 23:12:19] 2026-01-10 04:11:40,714 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:12:19] 2026-01-10 04:11:40,714 | INFO     | pilot state: finished 
[2026-01-09 23:12:19] 2026-01-10 04:11:40,714 | INFO     | transexitcode: 0
[2026-01-09 23:12:19] 2026-01-10 04:11:40,714 | INFO     | exeerrorcode: 0
[2026-01-09 23:12:19] 2026-01-10 04:11:40,714 | INFO     | exeerrordiag: 
[2026-01-09 23:12:19] 2026-01-10 04:11:40,714 | INFO     | exitcode: 0
[2026-01-09 23:12:19] 2026-01-10 04:11:40,714 | INFO     | exitmsg: OK
[2026-01-09 23:12:19] 2026-01-10 04:11:40,714 | INFO     | cpuconsumptiontime: 68594 s
[2026-01-09 23:12:19] 2026-01-10 04:11:40,715 | INFO     | nevents: 400
[2026-01-09 23:12:19] 2026-01-10 04:11:40,715 | INFO     | neventsw: 0
[2026-01-09 23:12:19] 2026-01-10 04:11:40,715 | INFO     | pid: 1337791
[2026-01-09 23:12:19] 2026-01-10 04:11:40,715 | INFO     | pgrp: 1337791
[2026-01-09 23:12:19] 2026-01-10 04:11:40,715 | INFO     | corecount: 9
[2026-01-09 23:12:19] 2026-01-10 04:11:40,715 | INFO     | event service: False
[2026-01-09 23:12:19] 2026-01-10 04:11:40,715 | INFO     | sizes: {0: 2283799, 1: 2283998, 5: 2284260, 11: 2284316, 34928: 2323386, 34929: 2323385, 34943: 2332567, 34947: 2332623, 34997: 2332817}
[2026-01-09 23:12:19] 2026-01-10 04:11:40,715 | INFO     | --------------------------------------------------
[2026-01-09 23:12:19] 2026-01-10 04:11:40,715 | INFO     | 
[2026-01-09 23:12:19] 2026-01-10 04:11:40,715 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 23:12:19] 2026-01-10 04:11:41,078 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,078 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,078 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,078 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,078 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,078 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,078 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,078 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,079 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,079 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,079 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,079 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,079 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,079 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,079 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,079 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,079 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,079 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:12:19] 2026-01-10 04:11:41,080 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,080 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:12:19] 2026-01-10 04:11:41,080 | INFO     | job 6963152976 has completed (purged errors)
[2026-01-09 23:12:19] 2026-01-10 04:11:41,080 | INFO     | overall cleanup function is called
[2026-01-09 23:12:19] 2026-01-10 04:11:42,145 | INFO     | --- collectZombieJob: --- 10, [1337791]
[2026-01-09 23:12:19] 2026-01-10 04:11:42,147 | INFO     | zombie collector waiting for pid 1337791
[2026-01-09 23:12:19] 2026-01-10 04:11:42,147 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:12:19] 2026-01-10 04:11:42,147 | INFO     | collected zombie processes
[2026-01-09 23:12:19] 2026-01-10 04:11:42,147 | INFO     | will attempt to kill all subprocesses of pid=1337791
[2026-01-09 23:12:19] 2026-01-10 04:11:44,670 | INFO     | PID=1328977 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:12:19] 2026-01-10 04:11:44,670 | INFO     | .. there are 28 such processes running
[2026-01-09 23:12:19] 2026-01-10 04:11:44,891 | INFO     | process IDs to be killed: [1337791] (in reverse order)
[2026-01-09 23:12:19] 2026-01-10 04:11:45,005 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:12:19] 2026-01-10 04:11:45,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:12:19] 2026-01-10 04:11:45,143 | INFO     | did not find any defunct processes belonging to 1337791
[2026-01-09 23:12:19] 2026-01-10 04:11:45,332 | INFO     | did not find any defunct processes belonging to 1337791
[2026-01-09 23:12:19] 2026-01-10 04:11:45,332 | INFO     | ready for new job
[2026-01-09 23:12:19] 2026-01-10 04:11:45,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:12:19] 2026-01-10 04:11:45,388 | INFO     | ***************************************
[2026-01-09 23:12:19] 2026-01-10 04:11:45,388 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:12:19] 2026-01-10 04:11:45,388 | INFO     | ***************************************
[2026-01-09 23:12:19] 2026-01-10 04:11:45,388 | INFO     | 
[2026-01-09 23:12:19] 2026-01-10 04:11:45,390 | INFO     | architecture information:
[2026-01-09 23:12:19] 2026-01-10 04:11:45,435 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:12:19] 2026-01-10 04:11:45,606 | INFO     | cat /etc/os-release:
[2026-01-09 23:12:19] NAME="CentOS Linux"
[2026-01-09 23:12:19] VERSION="7 (Core)"
[2026-01-09 23:12:19] ID="centos"
[2026-01-09 23:12:19] ID_LIKE="rhel fedora"
[2026-01-09 23:12:19] VERSION_ID="7"
[2026-01-09 23:12:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:12:19] ANSI_COLOR="0;31"
[2026-01-09 23:12:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:12:19] HOME_URL="https://www.centos.org/"
[2026-01-09 23:12:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:12:19] 
[2026-01-09 23:12:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:12:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:12:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:12:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:12:19] 
[2026-01-09 23:12:19] 2026-01-10 04:11:45,607 | INFO     | ***************************************
[2026-01-09 23:12:19] 2026-01-10 04:11:46,110 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 23:12:19] 2026-01-10 04:11:46,311 | INFO     | sufficient remaining disk space (75575066624 B)
[2026-01-09 23:12:19] 2026-01-10 04:11:46,312 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:12:19] 2026-01-10 04:11:46,312 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:12:19] 2026-01-10 04:11:46,312 | INFO     | update_server=False
[2026-01-09 23:12:19] 2026-01-10 04:11:46,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:12:19] 2026-01-10 04:11:46,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:12:19] 2026-01-10 04:11:46,313 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:12:19] 2026-01-10 04:11:46,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:12:19] 2026-01-10 04:11:46,314 | INFO     | aborting loop
[2026-01-09 23:12:19] 2026-01-10 04:11:46,500 | INFO     | all data control threads have been joined
[2026-01-09 23:12:19] 2026-01-10 04:11:46,677 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:12:19] 2026-01-10 04:11:46,782 | INFO     | all payload control threads have been joined
[2026-01-09 23:12:19] 2026-01-10 04:11:46,984 | INFO     | all job control threads have been joined
[2026-01-09 23:12:19] 2026-01-10 04:11:47,318 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:12:19] 2026-01-10 04:11:47,336 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:12:19] 2026-01-10 04:11:47,337 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:12:19] 2026-01-10 04:11:47,506 | INFO     | [data] control thread has finished
[2026-01-09 23:12:19] 2026-01-10 04:11:47,535 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:12:19] 2026-01-10 04:11:47,592 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:12:19] 2026-01-10 04:11:47,788 | INFO     | [payload] control thread has finished
[2026-01-09 23:12:19] 2026-01-10 04:11:47,979 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:12:19] 2026-01-10 04:11:47,986 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:12:19] 2026-01-10 04:11:47,987 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:12:19] 2026-01-10 04:11:47,990 | INFO     | [job] control thread has finished
[2026-01-09 23:12:19] 2026-01-10 04:11:48,033 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:12:19] 2026-01-10 04:11:48,068 | INFO     | [job] validate thread has finished
[2026-01-09 23:12:19] 2026-01-10 04:11:48,338 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:12:19] 2026-01-10 04:11:48,688 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:12:19] 2026-01-10 04:11:50,688 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:12:19] 2026-01-10 04:12:11,233 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:12:19] 2026-01-10 04:12:12,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884157884224)>', '<ExcThread(monitor, started 139883511273216)>']
[2026-01-09 23:12:19] 2026-01-10 04:12:17,458 | INFO     | all workflow threads have been joined
[2026-01-09 23:12:19] 2026-01-10 04:12:17,458 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:12:19] 2026-01-10 04:12:17,459 | INFO     | traces error code: 0
[2026-01-09 23:12:19] 2026-01-10 04:12:17,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:12:19] 2026-01-10 04:12:18,179 | INFO     | PID=1328977 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:12:19] 2026-01-10 04:12:18,179 | INFO     | .. there are 28 such processes running
[2026-01-09 23:12:19] 2026-01-10 04:12:18,180 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:12:19] 2026-01-10 04:12:18,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:12:19] 2026-01-10 04:12:18,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:12:19] 2026-01-10 04:12:18,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:12:19] 2026-01-10 04:12:18,180 | INFO     | [monitor] control thread has ended
[2026-01-09 23:12:19] 2026-01-10 04:12:18,315 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:12:19] 2026-01-10 04:12:18,318 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:12:19] 2026-01-10 04:12:18,320 [wrapper] pilotpid: 1328977
[2026-01-09 23:12:19] 2026-01-10 04:12:18,322 [wrapper] Pilot exit status: 0
[2026-01-09 23:12:19] 2026-01-10 04:12:18,476 [wrapper] pandaids: 6963152976
[2026-01-09 23:12:19] 2026-01-10 04:12:18,685 [wrapper] cleanup supervisor_pilot 3110907 1328978
[2026-01-09 23:12:19] 2026-01-10 04:12:18,702 [wrapper] Test setup, not cleaning
[2026-01-09 23:12:19] 2026-01-10 04:12:18,739 [wrapper] apfmon messages muted
[2026-01-09 23:12:19] 2026-01-10 04:12:18,780 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:12:19] 2026-01-10 04:12:18,815 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:12:19]  *** Error codes and diagnostics ***
[2026-01-09 23:12:19]     "exeErrorCode": 0,
[2026-01-09 23:12:19]     "exeErrorDiag": "",
[2026-01-09 23:12:19]     "pilotErrorCode": 0,
[2026-01-09 23:12:19]     "pilotErrorDiag": "",
[2026-01-09 23:12:19]  *** Listing of results directory ***
[2026-01-09 23:12:19] total 440108
[2026-01-09 23:12:19] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 23:12:19] -rwx------. 1 boincer umatlas     36322 Jan  8 11:07 runpilot2-wrapper.sh
[2026-01-09 23:12:19] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 23:12:19] -rw-r--r--. 1 boincer umatlas       100 Jan  9 13:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:12:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 13:27 run_atlas
[2026-01-09 23:12:19] -rw-r--r--. 1 boincer umatlas       105 Jan  9 13:27 job.xml
[2026-01-09 23:12:19] -rw-r--r--. 2 boincer umatlas 223667695 Jan  9 13:27 EVNT.47898824._001148.pool.root.1
[2026-01-09 23:12:19] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:27 start_atlas.sh
[2026-01-09 23:12:19] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 13:27 shared
[2026-01-09 23:12:19] -rw-r--r--. 2 boincer umatlas    592394 Jan  9 13:27 input.tar.gz
[2026-01-09 23:12:19] -rw-r--r--. 1 boincer umatlas         0 Jan  9 13:27 boinc_lockfile
[2026-01-09 23:12:19] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 13:27 pandaJob.out
[2026-01-09 23:12:19] -rw-------. 1 boincer umatlas        57 Jan  9 13:27 setup.sh.local
[2026-01-09 23:12:19] -rw-------. 1 boincer umatlas    989372 Jan  9 13:28 agis_schedconf.cvmfs.json
[2026-01-09 23:12:19] drwx------. 5 boincer umatlas      4096 Jan  9 13:28 pilot3
[2026-01-09 23:12:19] -rw-------. 1 boincer umatlas 213831946 Jan  9 23:08 HITS.47898826._029678.pool.root.1
[2026-01-09 23:12:19] -rw-r--r--. 1 boincer umatlas       531 Jan  9 23:08 boinc_task_state.xml
[2026-01-09 23:12:19] -rw-------. 1 boincer umatlas      1044 Jan  9 23:10 memory_monitor_summary.json
[2026-01-09 23:12:19] -rw-------. 1 boincer umatlas   1516240 Jan  9 23:10 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:12:19] -rw-------. 1 boincer umatlas    695639 Jan  9 23:10 log.47898826._029678.job.log.tgz.1
[2026-01-09 23:12:19] -rw-r--r--. 1 boincer umatlas      6659 Jan  9 23:11 init_data.xml
[2026-01-09 23:12:19] -rw-------. 1 boincer umatlas      7823 Jan  9 23:11 heartbeat.json
[2026-01-09 23:12:19] -rw-r--r--. 1 boincer umatlas        28 Jan  9 23:12 wrapper_checkpoint.txt
[2026-01-09 23:12:19] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 23:12 boinc_mmap_file
[2026-01-09 23:12:19] -rw-------. 1 boincer umatlas        95 Jan  9 23:12 pilot_heartbeat.json
[2026-01-09 23:12:19] -rw-------. 1 boincer umatlas       823 Jan  9 23:12 pilotlog.txt
[2026-01-09 23:12:19] -rw-------. 1 boincer umatlas   3934251 Jan  9 23:12 log.47898826._029678.job.log.1
[2026-01-09 23:12:19] -rw-------. 1 boincer umatlas       357 Jan  9 23:12 output.list
[2026-01-09 23:12:19] -rw-r--r--. 1 boincer umatlas       620 Jan  9 23:12 runtime_log
[2026-01-09 23:12:19] -rw-------. 1 boincer umatlas   4648960 Jan  9 23:12 result.tar.gz
[2026-01-09 23:12:19] -rw-r--r--. 1 boincer umatlas      9333 Jan  9 23:12 runtime_log.err
[2026-01-09 23:12:19] -rw-------. 1 boincer umatlas       656 Jan  9 23:12 r1xNDmZi7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVufKDmxp2qWn.diag
[2026-01-09 23:12:19] -rw-r--r--. 1 boincer umatlas     21276 Jan  9 23:12 stderr.txt
[2026-01-09 23:12:19] HITS file was successfully produced:
[2026-01-09 23:12:19] -rw-------. 1 boincer umatlas 213831946 Jan  9 23:08 shared/HITS.pool.root.1
[2026-01-09 23:12:19]  *** Contents of shared directory: ***
[2026-01-09 23:12:19] total 432392
[2026-01-09 23:12:19] -rw-r--r--. 2 boincer umatlas 223667695 Jan  9 13:27 ATLAS.root_0
[2026-01-09 23:12:19] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:27 start_atlas.sh
[2026-01-09 23:12:19] -rw-r--r--. 2 boincer umatlas    592394 Jan  9 13:27 input.tar.gz
[2026-01-09 23:12:19] -rw-------. 1 boincer umatlas 213831946 Jan  9 23:08 HITS.pool.root.1
[2026-01-09 23:12:19] -rw-------. 1 boincer umatlas   4648960 Jan  9 23:12 result.tar.gz
23:12:21 (1325185): run_atlas exited; CPU time 69756.952630
23:12:21 (1325185): called boinc_finish(0)

</stderr_txt>
]]>

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