Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:05 (2831728): wrapper (7.7.26015): starting
00:05:05 (2831728): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:05:05] Arguments: --nthreads 8
[2026-01-09 00:05:05] Threads: 8
[2026-01-09 00:05:05] Checking for CVMFS
[2026-01-09 00:05:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:05:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:05:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:05:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:05:08] 2.13.3.0 8454 22081 176496 154931 0 24 31231722 39288832 7504 16776704 0 6077963 99.300 10934889 33953 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:05:08] CVMFS is ok
[2026-01-09 00:05:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:05:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:05:08] Further information can be found at the LHC@home message board.
[2026-01-09 00:05:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:05:08] Checking for apptainer binary...
[2026-01-09 00:05:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:05:08] Running /usr/bin/apptainer --version
[2026-01-09 00:05:08] apptainer version 1.4.5-2.el9
[2026-01-09 00:05:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:05:10] c-211-31.aglt2.org
[2026-01-09 00:05:10] apptainer works
[2026-01-09 00:05:10] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:05:10] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:05:11] Starting ATLAS job with PandaID=6963152338
[2026-01-09 00:05:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 16:01:43]  *** The last 200 lines of the pilot log: ***
[2026-01-10 16:01:43] 2026-01-10 21:01:09,190 | INFO     | mean y: 2516074.9304904053
[2026-01-10 16:01:43] 2026-01-10 21:01:09,190 | INFO     | intersect: -1439424243.7510705
[2026-01-10 16:01:43] 2026-01-10 21:01:09,193 | INFO     | chi2: 4.078098122124802
[2026-01-10 16:01:43] 2026-01-10 21:01:09,193 | INFO     | current chi2=4.078098122124802 (change=50.2344868954203 %)
[2026-01-10 16:01:43] 2026-01-10 21:01:09,196 | INFO     | sum of square deviations: 3973018540013.8887
[2026-01-10 16:01:43] 2026-01-10 21:01:09,343 | INFO     | sum of deviations: 2647874419328.722
[2026-01-10 16:01:43] 2026-01-10 21:01:09,343 | INFO     | mean x: 1768007462.2782052
[2026-01-10 16:01:43] 2026-01-10 21:01:09,343 | INFO     | mean y: 2519738.61025641
[2026-01-10 16:01:43] 2026-01-10 21:01:09,344 | INFO     | intersect: -1175793849.7608626
[2026-01-10 16:01:43] 2026-01-10 21:01:09,347 | INFO     | chi2: 1.7543659073332343
[2026-01-10 16:01:43] 2026-01-10 21:01:09,347 | INFO     | current chi2=1.7543659073332343 (change=56.98078234519867 %)
[2026-01-10 16:01:43] 2026-01-10 21:01:09,350 | INFO     | sum of square deviations: 3947603840022.2954
[2026-01-10 16:01:43] 2026-01-10 21:01:09,496 | INFO     | sum of deviations: 2276183588389.506
[2026-01-10 16:01:43] 2026-01-10 21:01:09,497 | INFO     | mean x: 1768007614.7803
[2026-01-10 16:01:43] 2026-01-10 21:01:09,497 | INFO     | mean y: 2521968.271948608
[2026-01-10 16:01:43] 2026-01-10 21:01:09,497 | INFO     | intersect: -1016909079.0156803
[2026-01-10 16:01:43] 2026-01-10 21:01:09,500 | INFO     | chi2: 0.8721223725131494
[2026-01-10 16:01:43] 2026-01-10 21:01:09,501 | INFO     | current chi2=0.8721223725131494 (change=50.288456423618044 %)
[2026-01-10 16:01:43] 2026-01-10 21:01:09,504 | INFO     | sum of square deviations: 3922297889031.7437
[2026-01-10 16:01:43] 2026-01-10 21:01:09,654 | INFO     | sum of deviations: 2037319386333.9712
[2026-01-10 16:01:43] 2026-01-10 21:01:09,655 | INFO     | mean x: 1768007767.2819743
[2026-01-10 16:01:43] 2026-01-10 21:01:09,656 | INFO     | mean y: 2523407.5875536483
[2026-01-10 16:01:43] 2026-01-10 21:01:09,656 | INFO     | intersect: -915814924.0177985
[2026-01-10 16:01:43] 2026-01-10 21:01:09,659 | INFO     | chi2: 0.5422182328995568
[2026-01-10 16:01:43] 2026-01-10 21:01:09,659 | INFO     | current chi2=0.5422182328995568 (change=37.827734961428064 %)
[2026-01-10 16:01:43] 2026-01-10 21:01:09,663 | INFO     | sum of square deviations: 3897100596667.3174
[2026-01-10 16:01:43] 2026-01-10 21:01:09,814 | INFO     | sum of deviations: 1857777253050.9004
[2026-01-10 16:01:43] 2026-01-10 21:01:09,814 | INFO     | mean x: 1768007919.7827957
[2026-01-10 16:01:43] 2026-01-10 21:01:09,814 | INFO     | mean y: 2524494.122580645
[2026-01-10 16:01:43] 2026-01-10 21:01:09,815 | INFO     | intersect: -840298218.5872681
[2026-01-10 16:01:43] 2026-01-10 21:01:09,818 | INFO     | chi2: 0.3610718815506245
[2026-01-10 16:01:43] 2026-01-10 21:01:09,818 | INFO     | current chi2=0.3610718815506245 (change=33.40838436587374 %)
[2026-01-10 16:01:43] 2026-01-10 21:01:09,821 | INFO     | sum of square deviations: 3872011020146.672
[2026-01-10 16:01:43] 2026-01-10 21:01:09,956 | INFO     | monitor loop #6528: job 0:6963152338 is in state 'finished'
[2026-01-10 16:01:43] 2026-01-10 21:01:09,961 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 16:01:43] 2026-01-10 21:01:09,972 | INFO     | sum of deviations: 1741510106003.0037
[2026-01-10 16:01:43] 2026-01-10 21:01:09,972 | INFO     | mean x: 1768008072.2849138
[2026-01-10 16:01:43] 2026-01-10 21:01:09,973 | INFO     | mean y: 2525200.771551724
[2026-01-10 16:01:43] 2026-01-10 21:01:09,973 | INFO     | intersect: -792669830.791771
[2026-01-10 16:01:43] 2026-01-10 21:01:09,976 | INFO     | chi2: 0.28957291670974883
[2026-01-10 16:01:43] 2026-01-10 21:01:09,976 | INFO     | current chi2=0.28957291670974883 (change=19.80186453008279 %)
[2026-01-10 16:01:43] 2026-01-10 21:01:09,977 | INFO     | left removable region: 60
[2026-01-10 16:01:43] 2026-01-10 21:01:09,980 | INFO     | sum of square deviations: 3694540694950.353
[2026-01-10 16:01:43] 2026-01-10 21:01:10,125 | INFO     | sum of deviations: 1291365893539.5898
[2026-01-10 16:01:43] 2026-01-10 21:01:10,125 | INFO     | mean x: 1768008804.298599
[2026-01-10 16:01:43] 2026-01-10 21:01:10,126 | INFO     | mean y: 2527863.528458844
[2026-01-10 16:01:43] 2026-01-10 21:01:10,126 | INFO     | intersect: -615450515.3454008
[2026-01-10 16:01:43] 2026-01-10 21:01:10,129 | INFO     | chi2: 0.04434277653454391
[2026-01-10 16:01:43] 2026-01-10 21:01:10,129 | INFO     | current memory leak: 0.35 B/s (using 2284 data points, chi2=0.04)
[2026-01-10 16:01:43] 2026-01-10 21:01:10,132 | INFO     | could have reported an average CPU frequency of 2899 MHz (80 samples)
[2026-01-10 16:01:43] 2026-01-10 21:01:10,132 | INFO     | ..............................
[2026-01-10 16:01:43] 2026-01-10 21:01:10,132 | INFO     | . Timing measurements:
[2026-01-10 16:01:43] 2026-01-10 21:01:10,132 | INFO     | . get job = 2 s
[2026-01-10 16:01:43] 2026-01-10 21:01:10,133 | INFO     | . initial setup = 17 s
[2026-01-10 16:01:43] 2026-01-10 21:01:10,133 | INFO     | . payload setup = 79 s
[2026-01-10 16:01:43] 2026-01-10 21:01:10,133 | INFO     | . stage-in = 1 s
[2026-01-10 16:01:43] 2026-01-10 21:01:10,133 | INFO     | . payload execution = 143402 s
[2026-01-10 16:01:43] 2026-01-10 21:01:10,134 | INFO     | . stage-out = 2 s
[2026-01-10 16:01:43] 2026-01-10 21:01:10,134 | INFO     | . log creation = 0 s
[2026-01-10 16:01:43] 2026-01-10 21:01:10,134 | INFO     | ..............................
[2026-01-10 16:01:43] 2026-01-10 21:01:10,275 | INFO     | 
[2026-01-10 16:01:43] 2026-01-10 21:01:10,276 | INFO     | job summary report
[2026-01-10 16:01:43] 2026-01-10 21:01:10,276 | INFO     | --------------------------------------------------
[2026-01-10 16:01:43] 2026-01-10 21:01:10,276 | INFO     | PanDA job id: 6963152338
[2026-01-10 16:01:43] 2026-01-10 21:01:10,277 | INFO     | task id: 47898826
[2026-01-10 16:01:43] 2026-01-10 21:01:10,277 | INFO     | errors: (none)
[2026-01-10 16:01:43] 2026-01-10 21:01:10,277 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 16:01:43] 2026-01-10 21:01:10,277 | INFO     | pilot state: finished 
[2026-01-10 16:01:43] 2026-01-10 21:01:10,277 | INFO     | transexitcode: 0
[2026-01-10 16:01:43] 2026-01-10 21:01:10,277 | INFO     | exeerrorcode: 0
[2026-01-10 16:01:43] 2026-01-10 21:01:10,278 | INFO     | exeerrordiag: 
[2026-01-10 16:01:43] 2026-01-10 21:01:10,278 | INFO     | exitcode: 0
[2026-01-10 16:01:43] 2026-01-10 21:01:10,278 | INFO     | exitmsg: OK
[2026-01-10 16:01:43] 2026-01-10 21:01:10,278 | INFO     | cpuconsumptiontime: 102815 s
[2026-01-10 16:01:43] 2026-01-10 21:01:10,278 | INFO     | nevents: 400
[2026-01-10 16:01:43] 2026-01-10 21:01:10,278 | INFO     | neventsw: 0
[2026-01-10 16:01:43] 2026-01-10 21:01:10,279 | INFO     | pid: 2881817
[2026-01-10 16:01:43] 2026-01-10 21:01:10,279 | INFO     | pgrp: 2881817
[2026-01-10 16:01:43] 2026-01-10 21:01:10,279 | INFO     | corecount: 8
[2026-01-10 16:01:43] 2026-01-10 21:01:10,279 | INFO     | event service: False
[2026-01-10 16:01:43] 2026-01-10 21:01:10,279 | INFO     | sizes: {0: 2283142, 1: 2283827, 2: 2283827, 3: 2284054, 5: 2284054, 18: 2284110, 31: 2284266, 43: 2284294, 55: 2284322, 65: 2284612, 67: 2284640, 143486: 2370403, 
[2026-01-10 16:01:43] 2026-01-10 21:01:10,280 | INFO     | --------------------------------------------------
[2026-01-10 16:01:43] 2026-01-10 21:01:10,280 | INFO     | 
[2026-01-10 16:01:43] 2026-01-10 21:01:10,280 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-10 16:01:43] 2026-01-10 21:01:10,300 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,301 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,301 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,301 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,302 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,302 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,302 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,302 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,302 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,303 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,303 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,304 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 16:01:43] 2026-01-10 21:01:10,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,304 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 16:01:43] 2026-01-10 21:01:10,305 | INFO     | job 6963152338 has completed (purged errors)
[2026-01-10 16:01:43] 2026-01-10 21:01:10,305 | INFO     | overall cleanup function is called
[2026-01-10 16:01:43] 2026-01-10 21:01:10,633 | INFO     | PID=2845535 has CPU usage=20.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 16:01:43] 2026-01-10 21:01:10,633 | INFO     | .. there are 7 such processes running
[2026-01-10 16:01:43] 2026-01-10 21:01:11,315 | INFO     | --- collectZombieJob: --- 10, [2881817]
[2026-01-10 16:01:43] 2026-01-10 21:01:11,315 | INFO     | zombie collector waiting for pid 2881817
[2026-01-10 16:01:43] 2026-01-10 21:01:11,315 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 16:01:43] 2026-01-10 21:01:11,315 | INFO     | collected zombie processes
[2026-01-10 16:01:43] 2026-01-10 21:01:11,315 | INFO     | will attempt to kill all subprocesses of pid=2881817
[2026-01-10 16:01:43] 2026-01-10 21:01:11,597 | INFO     | process IDs to be killed: [2881817] (in reverse order)
[2026-01-10 16:01:43] 2026-01-10 21:01:11,672 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 16:01:43] 2026-01-10 21:01:11,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 16:01:43] 2026-01-10 21:01:11,683 | INFO     | did not find any defunct processes belonging to 2881817
[2026-01-10 16:01:43] 2026-01-10 21:01:11,695 | INFO     | did not find any defunct processes belonging to 2881817
[2026-01-10 16:01:43] 2026-01-10 21:01:11,695 | INFO     | ready for new job
[2026-01-10 16:01:43] 2026-01-10 21:01:11,695 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 16:01:43] 2026-01-10 21:01:11,704 | INFO     | ***************************************
[2026-01-10 16:01:43] 2026-01-10 21:01:11,704 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 16:01:43] 2026-01-10 21:01:11,704 | INFO     | ***************************************
[2026-01-10 16:01:43] 2026-01-10 21:01:11,705 | INFO     | 
[2026-01-10 16:01:43] 2026-01-10 21:01:11,707 | INFO     | architecture information:
[2026-01-10 16:01:43] 2026-01-10 21:01:11,707 | INFO     | executing command: cat /etc/os-release
[2026-01-10 16:01:43] 2026-01-10 21:01:11,721 | INFO     | cat /etc/os-release:
[2026-01-10 16:01:43] NAME="CentOS Linux"
[2026-01-10 16:01:43] VERSION="7 (Core)"
[2026-01-10 16:01:43] ID="centos"
[2026-01-10 16:01:43] ID_LIKE="rhel fedora"
[2026-01-10 16:01:43] VERSION_ID="7"
[2026-01-10 16:01:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 16:01:43] ANSI_COLOR="0;31"
[2026-01-10 16:01:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 16:01:43] HOME_URL="https://www.centos.org/"
[2026-01-10 16:01:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 16:01:43] 
[2026-01-10 16:01:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 16:01:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 16:01:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 16:01:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 16:01:43] 
[2026-01-10 16:01:43] 2026-01-10 21:01:11,721 | INFO     | ***************************************
[2026-01-10 16:01:43] 2026-01-10 21:01:12,224 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-10 16:01:43] 2026-01-10 21:01:12,239 | INFO     | sufficient remaining disk space (53054799872 B)
[2026-01-10 16:01:43] 2026-01-10 21:01:12,240 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 16:01:43] 2026-01-10 21:01:12,240 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 16:01:43] 2026-01-10 21:01:12,240 | INFO     | update_server=False
[2026-01-10 16:01:43] 2026-01-10 21:01:12,240 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 16:01:43] 2026-01-10 21:01:12,241 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:01:43] 2026-01-10 21:01:12,241 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 16:01:43] 2026-01-10 21:01:12,475 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 16:01:43] 2026-01-10 21:01:12,475 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 16:01:43] 2026-01-10 21:01:12,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:01:43] 2026-01-10 21:01:12,476 | INFO     | will abort loop
[2026-01-10 16:01:43] 2026-01-10 21:01:12,732 | INFO     | all data control threads have been joined
[2026-01-10 16:01:43] 2026-01-10 21:01:13,246 | INFO     | [job] queue monitor thread has finished
[2026-01-10 16:01:43] 2026-01-10 21:01:13,246 | INFO     | [job] retrieve thread has finished
[2026-01-10 16:01:43] 2026-01-10 21:01:13,381 | INFO     | all payload control threads have been joined
[2026-01-10 16:01:43] 2026-01-10 21:01:13,458 | INFO     | [data] copytool_in thread has finished
[2026-01-10 16:01:43] 2026-01-10 21:01:13,481 | INFO     | [job] job monitor thread has finished
[2026-01-10 16:01:43] 2026-01-10 21:01:13,619 | INFO     | all job control threads have been joined
[2026-01-10 16:01:43] 2026-01-10 21:01:13,710 | INFO     | [payload] failed_post thread has finished
[2026-01-10 16:01:43] 2026-01-10 21:01:13,737 | INFO     | [data] control thread has finished
[2026-01-10 16:01:43] 2026-01-10 21:01:14,046 | INFO     | [job] validate thread has finished
[2026-01-10 16:01:43] 2026-01-10 21:01:14,082 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 16:01:43] 2026-01-10 21:01:14,131 | INFO     | [payload] validate_post thread has finished
[2026-01-10 16:01:43] 2026-01-10 21:01:14,246 | INFO     | [data] copytool_out thread has finished
[2026-01-10 16:01:43] 2026-01-10 21:01:14,386 | INFO     | [payload] control thread has finished
[2026-01-10 16:01:43] 2026-01-10 21:01:14,571 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 16:01:43] 2026-01-10 21:01:14,625 | INFO     | [job] control thread has finished
[2026-01-10 16:01:43] 2026-01-10 21:01:14,657 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 16:01:43] 2026-01-10 21:01:15,121 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 16:01:43] 2026-01-10 21:01:19,127 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 16:01:43] 2026-01-10 21:01:20,182 | INFO     | [monitor] cgroup control has ended
[2026-01-10 16:01:43] 2026-01-10 21:01:22,990 | INFO     | job.realtimelogging is not enabled
[2026-01-10 16:01:43] 2026-01-10 21:01:23,995 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 16:01:43] 2026-01-10 21:01:26,105 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483614877504)>', '<ExcThread(monitor, started 140483254798080)>']
[2026-01-10 16:01:43] 2026-01-10 21:01:31,130 | INFO     | all workflow threads have been joined
[2026-01-10 16:01:43] 2026-01-10 21:01:31,130 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 16:01:43] 2026-01-10 21:01:31,131 | INFO     | traces error code: 0
[2026-01-10 16:01:43] 2026-01-10 21:01:31,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 16:01:43] 2026-01-10 21:01:43,092 | INFO     | PID=2845535 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 16:01:43] 2026-01-10 21:01:43,092 | INFO     | .. there are 7 such processes running
[2026-01-10 16:01:43] 2026-01-10 21:01:43,093 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 16:01:43] 2026-01-10 21:01:43,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 16:01:43] 2026-01-10 21:01:43,094 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 16:01:43] 2026-01-10 21:01:43,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 16:01:43] 2026-01-10 21:01:43,094 | INFO     | [monitor] control thread has ended
[2026-01-10 16:01:43] 2026-01-10 21:01:43,242 [wrapper] ==== pilot stdout END ====
[2026-01-10 16:01:43] 2026-01-10 21:01:43,244 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 16:01:43] 2026-01-10 21:01:43,247 [wrapper] pilotpid: 2845535
[2026-01-10 16:01:43] 2026-01-10 21:01:43,250 [wrapper] Pilot exit status: 0
[2026-01-10 16:01:43] 2026-01-10 21:01:43,264 [wrapper] pandaids: 6963152338
[2026-01-10 16:01:43] 2026-01-10 21:01:43,317 [wrapper] cleanup supervisor_pilot 2361733 2845536
[2026-01-10 16:01:43] 2026-01-10 21:01:43,320 [wrapper] Test setup, not cleaning
[2026-01-10 16:01:43] 2026-01-10 21:01:43,323 [wrapper] apfmon messages muted
[2026-01-10 16:01:43] 2026-01-10 21:01:43,326 [wrapper] ==== wrapper stdout END ====
[2026-01-10 16:01:43] 2026-01-10 21:01:43,330 [wrapper] ==== wrapper stderr END ====
[2026-01-10 16:01:43]  *** Error codes and diagnostics ***
[2026-01-10 16:01:43]     "exeErrorCode": 0,
[2026-01-10 16:01:43]     "exeErrorDiag": "",
[2026-01-10 16:01:43]     "pilotErrorCode": 0,
[2026-01-10 16:01:43]     "pilotErrorDiag": "",
[2026-01-10 16:01:43]  *** Listing of results directory ***
[2026-01-10 16:01:43] total 469604
[2026-01-10 16:01:43] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-10 16:01:43] -rwx------. 1 boincer umatlas     36322 Jan  8 11:06 runpilot2-wrapper.sh
[2026-01-10 16:01:43] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-10 16:01:43] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 16:01:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:05 run_atlas
[2026-01-10 16:01:43] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:05 job.xml
[2026-01-10 16:01:43] -rw-r--r--. 2 boincer umatlas 226520843 Jan  9 00:05 EVNT.47898824._001141.pool.root.1
[2026-01-10 16:01:43] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:05 start_atlas.sh
[2026-01-10 16:01:43] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:05 shared
[2026-01-10 16:01:43] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 00:05 input.tar.gz
[2026-01-10 16:01:43] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:05 boinc_lockfile
[2026-01-10 16:01:43] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 00:05 pandaJob.out
[2026-01-10 16:01:43] -rw-------. 1 boincer umatlas        57 Jan  9 00:05 setup.sh.local
[2026-01-10 16:01:43] -rw-------. 1 boincer umatlas    989771 Jan  9 00:06 agis_schedconf.cvmfs.json
[2026-01-10 16:01:43] drwx------. 5 boincer umatlas      4096 Jan  9 00:07 pilot3
[2026-01-10 16:01:43] -rw-r--r--. 1 boincer umatlas      6524 Jan 10 16:00 init_data.xml
[2026-01-10 16:01:43] -rw-------. 1 boincer umatlas 216492453 Jan 10 16:00 HITS.47898826._029139.pool.root.1
[2026-01-10 16:01:43] -rw-r--r--. 1 boincer umatlas       531 Jan 10 16:00 boinc_task_state.xml
[2026-01-10 16:01:43] -rw-------. 1 boincer umatlas      1042 Jan 10 16:00 memory_monitor_summary.json
[2026-01-10 16:01:43] -rw-------. 1 boincer umatlas   1516240 Jan 10 16:01 agis_ddmendpoints.agis.ALL.json
[2026-01-10 16:01:43] -rw-------. 1 boincer umatlas   1888062 Jan 10 16:01 log.47898826._029139.job.log.tgz.1
[2026-01-10 16:01:43] -rw-------. 1 boincer umatlas      7831 Jan 10 16:01 heartbeat.json
[2026-01-10 16:01:43] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 16:01 boinc_mmap_file
[2026-01-10 16:01:43] -rw-r--r--. 1 boincer umatlas        28 Jan 10 16:01 wrapper_checkpoint.txt
[2026-01-10 16:01:43] -rw-------. 1 boincer umatlas        95 Jan 10 16:01 pilot_heartbeat.json
[2026-01-10 16:01:43] -rw-------. 1 boincer umatlas       822 Jan 10 16:01 pilotlog.txt
[2026-01-10 16:01:43] -rw-------. 1 boincer umatlas  15087476 Jan 10 16:01 log.47898826._029139.job.log.1
[2026-01-10 16:01:43] -rw-------. 1 boincer umatlas       357 Jan 10 16:01 output.list
[2026-01-10 16:01:43] -rw-r--r--. 1 boincer umatlas       620 Jan 10 16:01 runtime_log
[2026-01-10 16:01:43] -rw-------. 1 boincer umatlas  16998400 Jan 10 16:01 result.tar.gz
[2026-01-10 16:01:43] -rw-r--r--. 1 boincer umatlas      9344 Jan 10 16:01 runtime_log.err
[2026-01-10 16:01:43] -rw-------. 1 boincer umatlas       661 Jan 10 16:01 DAONDmAi7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNrfKDmqusTjm.diag
[2026-01-10 16:01:43] -rw-r--r--. 1 boincer umatlas     21310 Jan 10 16:01 stderr.txt
[2026-01-10 16:01:43] HITS file was successfully produced:
[2026-01-10 16:01:43] -rw-------. 1 boincer umatlas 216492453 Jan 10 16:00 shared/HITS.pool.root.1
[2026-01-10 16:01:43]  *** Contents of shared directory: ***
[2026-01-10 16:01:43] total 449832
[2026-01-10 16:01:43] -rw-r--r--. 2 boincer umatlas 226520843 Jan  9 00:05 ATLAS.root_0
[2026-01-10 16:01:43] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:05 start_atlas.sh
[2026-01-10 16:01:43] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 00:05 input.tar.gz
[2026-01-10 16:01:43] -rw-------. 1 boincer umatlas 216492453 Jan 10 16:00 HITS.pool.root.1
[2026-01-10 16:01:43] -rw-------. 1 boincer umatlas  16998400 Jan 10 16:01 result.tar.gz
16:01:44 (2831728): run_atlas exited; CPU time 107529.197841
16:01:44 (2831728): called boinc_finish(0)

</stderr_txt>
]]>

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