Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:25 (884110): wrapper (7.7.26015): starting
00:03:25 (884110): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:03:25] Arguments: --nthreads 8
[2026-01-09 00:03:25] Threads: 8
[2026-01-09 00:03:25] Checking for CVMFS
[2026-01-09 00:03:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:03:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:03:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:03:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:03:29] 2.13.3.0 8593 19307 228328 154931 0 211 37974559 39288833 11198 16776704 0 17924642 99.754 32231678 30380 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:03:29] CVMFS is ok
[2026-01-09 00:03:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:03:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:03:29] Further information can be found at the LHC@home message board.
[2026-01-09 00:03:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:03:29] Checking for apptainer binary...
[2026-01-09 00:03:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:03:29] Running /usr/bin/apptainer --version
[2026-01-09 00:03:29] apptainer version 1.4.5-2.el9
[2026-01-09 00:03:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:03:30] c-211-25.aglt2.org
[2026-01-09 00:03:30] apptainer works
[2026-01-09 00:03:30] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:03:30] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:03:31] Starting ATLAS job with PandaID=6963076961
[2026-01-09 00:03:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 03:33:13]  *** The last 200 lines of the pilot log: ***
[2026-01-10 03:33:13] 2026-01-10 08:32:17,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 03:33:13] 2026-01-10 08:32:19,107 | INFO     | time since job start (98810s) is within the limit (174528.0s)
[2026-01-10 03:33:13] 2026-01-10 08:32:20,242 | INFO     | monitor loop #4397: job 0:6963076961 is in state 'finished'
[2026-01-10 03:33:13] 2026-01-10 08:32:20,265 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 03:33:13] 2026-01-10 08:32:21,120 | INFO     | time since job start (98812s) is within the limit (174528.0s)
[2026-01-10 03:33:13] 2026-01-10 08:32:22,771 | INFO     | monitor loop #4398: job 0:6963076961 is in state 'finished'
[2026-01-10 03:33:13] 2026-01-10 08:32:22,771 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 03:33:13] 2026-01-10 08:32:23,129 | INFO     | time since job start (98814s) is within the limit (174528.0s)
[2026-01-10 03:33:13] 2026-01-10 08:32:25,166 | INFO     | time since job start (98816s) is within the limit (174528.0s)
[2026-01-10 03:33:13] 2026-01-10 08:32:25,283 | INFO     | monitor loop #4399: job 0:6963076961 is in state 'finished'
[2026-01-10 03:33:13] 2026-01-10 08:32:25,283 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 03:33:13] 2026-01-10 08:32:27,175 | INFO     | time since job start (98818s) is within the limit (174528.0s)
[2026-01-10 03:33:13] 2026-01-10 08:32:27,792 | INFO     | monitor loop #4400: job 0:6963076961 is in state 'finished'
[2026-01-10 03:33:13] 2026-01-10 08:32:27,792 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 03:33:13] 2026-01-10 08:32:28,585 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 03:33:13] 2026-01-10 08:32:28,696 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2900.0057500000007
[2026-01-10 03:33:13] 2026-01-10 08:32:28,706 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963076961/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 03:33:13] 2026-01-10 08:32:28,707 | INFO     | extracted standard info from prmon json
[2026-01-10 03:33:13] 2026-01-10 08:32:28,707 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 03:33:13] 2026-01-10 08:32:28,707 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 03:33:13] 2026-01-10 08:32:28,750 | INFO     | fitting pss+swap vs Time
[2026-01-10 03:33:13] 2026-01-10 08:32:28,753 | INFO     | sum of square deviations: 1305973255569.5273
[2026-01-10 03:33:13] 2026-01-10 08:32:28,844 | INFO     | sum of deviations: 4390060172747.397
[2026-01-10 03:33:13] 2026-01-10 08:32:28,844 | INFO     | mean x: 1767984618.4130032
[2026-01-10 03:33:13] 2026-01-10 08:32:28,844 | INFO     | mean y: 2668335.7715170276
[2026-01-10 03:33:13] 2026-01-10 08:32:28,844 | INFO     | intersect: -5940454026.2099
[2026-01-10 03:33:13] 2026-01-10 08:32:28,847 | INFO     | chi2: 38.09432610401631
[2026-01-10 03:33:13] 2026-01-10 08:32:28,849 | INFO     | sum of square deviations: 1293881936835.069
[2026-01-10 03:33:13] 2026-01-10 08:32:29,052 | INFO     | sum of deviations: 4899767226441.606
[2026-01-10 03:33:13] 2026-01-10 08:32:29,052 | INFO     | mean x: 1767984465.9298136
[2026-01-10 03:33:13] 2026-01-10 08:32:29,052 | INFO     | mean y: 2674764.7664596275
[2026-01-10 03:33:13] 2026-01-10 08:32:29,053 | INFO     | intersect: -6692458768.212912
[2026-01-10 03:33:13] 2026-01-10 08:32:29,055 | INFO     | chi2: 34.78626645249511
[2026-01-10 03:33:13] 2026-01-10 08:32:29,068 | INFO     | current chi2=34.78626645249511 (change=8.683864474957668 %)
[2026-01-10 03:33:13] 2026-01-10 08:32:29,068 | INFO     | right removable region: 1609
[2026-01-10 03:33:13] 2026-01-10 08:32:29,071 | INFO     | sum of square deviations: 1293876604215.0696
[2026-01-10 03:33:13] 2026-01-10 08:32:29,199 | INFO     | time since job start (98820s) is within the limit (174528.0s)
[2026-01-10 03:33:13] 2026-01-10 08:32:29,505 | INFO     | sum of deviations: 3755654694204.861
[2026-01-10 03:33:13] 2026-01-10 08:32:29,505 | INFO     | mean x: 1767984770.9298136
[2026-01-10 03:33:13] 2026-01-10 08:32:29,506 | INFO     | mean y: 2676333.963354037
[2026-01-10 03:33:13] 2026-01-10 08:32:29,506 | INFO     | intersect: -5129142482.911676
[2026-01-10 03:33:13] 2026-01-10 08:32:29,522 | INFO     | chi2: 33.263420695998526
[2026-01-10 03:33:13] 2026-01-10 08:32:29,523 | INFO     | current chi2=33.263420695998526 (change=12.681430286565586 %)
[2026-01-10 03:33:13] 2026-01-10 08:32:29,523 | INFO     | left removable region: 10
[2026-01-10 03:33:13] 2026-01-10 08:32:29,525 | INFO     | sum of square deviations: 1267533834153.8894
[2026-01-10 03:33:13] 2026-01-10 08:32:29,973 | INFO     | sum of deviations: 3805400852294.6216
[2026-01-10 03:33:13] 2026-01-10 08:32:29,973 | INFO     | mean x: 1767984740.4659162
[2026-01-10 03:33:13] 2026-01-10 08:32:29,973 | INFO     | mean y: 2691368.745465916
[2026-01-10 03:33:13] 2026-01-10 08:32:29,973 | INFO     | intersect: -5305167448.848873
[2026-01-10 03:33:13] 2026-01-10 08:32:29,990 | INFO     | chi2: 25.487443217814178
[2026-01-10 03:33:13] 2026-01-10 08:32:29,990 | INFO     | current memory leak: 3.00 B/s (using 1599 data points, chi2=25.49)
[2026-01-10 03:33:13] 2026-01-10 08:32:29,992 | INFO     | could have reported an average CPU frequency of 2900 MHz (56 samples)
[2026-01-10 03:33:13] 2026-01-10 08:32:29,992 | INFO     | ..............................
[2026-01-10 03:33:13] 2026-01-10 08:32:29,993 | INFO     | . Timing measurements:
[2026-01-10 03:33:13] 2026-01-10 08:32:30,011 | INFO     | . get job = 0 s
[2026-01-10 03:33:13] 2026-01-10 08:32:30,011 | INFO     | . initial setup = 15 s
[2026-01-10 03:33:13] 2026-01-10 08:32:30,011 | INFO     | . payload setup = 70 s
[2026-01-10 03:33:13] 2026-01-10 08:32:30,012 | INFO     | . stage-in = 1 s
[2026-01-10 03:33:13] 2026-01-10 08:32:30,012 | INFO     | . payload execution = 98557 s
[2026-01-10 03:33:13] 2026-01-10 08:32:30,012 | INFO     | . stage-out = 8 s
[2026-01-10 03:33:13] 2026-01-10 08:32:30,012 | INFO     | . log creation = 2 s
[2026-01-10 03:33:13] 2026-01-10 08:32:30,012 | INFO     | ..............................
[2026-01-10 03:33:13] 2026-01-10 08:32:31,198 | INFO     | 
[2026-01-10 03:33:13] 2026-01-10 08:32:31,198 | INFO     | job summary report
[2026-01-10 03:33:13] 2026-01-10 08:32:31,198 | INFO     | --------------------------------------------------
[2026-01-10 03:33:13] 2026-01-10 08:32:31,199 | INFO     | PanDA job id: 6963076961
[2026-01-10 03:33:13] 2026-01-10 08:32:31,199 | INFO     | task id: 47947082
[2026-01-10 03:33:13] 2026-01-10 08:32:31,199 | INFO     | errors: (none)
[2026-01-10 03:33:13] 2026-01-10 08:32:31,199 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 03:33:13] 2026-01-10 08:32:31,199 | INFO     | pilot state: finished 
[2026-01-10 03:33:13] 2026-01-10 08:32:31,200 | INFO     | transexitcode: 0
[2026-01-10 03:33:13] 2026-01-10 08:32:31,200 | INFO     | exeerrorcode: 0
[2026-01-10 03:33:13] 2026-01-10 08:32:31,200 | INFO     | exeerrordiag: 
[2026-01-10 03:33:13] 2026-01-10 08:32:31,200 | INFO     | exitcode: 0
[2026-01-10 03:33:13] 2026-01-10 08:32:31,200 | INFO     | exitmsg: OK
[2026-01-10 03:33:13] 2026-01-10 08:32:31,200 | INFO     | cpuconsumptiontime: 102189 s
[2026-01-10 03:33:13] 2026-01-10 08:32:31,201 | INFO     | nevents: 150
[2026-01-10 03:33:13] 2026-01-10 08:32:31,201 | INFO     | neventsw: 0
[2026-01-10 03:33:13] 2026-01-10 08:32:31,201 | INFO     | pid: 943760
[2026-01-10 03:33:13] 2026-01-10 08:32:31,201 | INFO     | pgrp: 943760
[2026-01-10 03:33:13] 2026-01-10 08:32:31,201 | INFO     | corecount: 8
[2026-01-10 03:33:13] 2026-01-10 08:32:31,201 | INFO     | event service: False
[2026-01-10 03:33:13] 2026-01-10 08:32:31,202 | INFO     | sizes: {0: 2284323, 1: 2284407, 2: 2284606, 13: 2284606, 24: 2284662, 35: 2284690, 48: 2284846, 60: 2284846, 61: 2285136, 73: 2285164, 98635: 2351174, 98636: 23514
[2026-01-10 03:33:13] 2026-01-10 08:32:31,224 | INFO     | --------------------------------------------------
[2026-01-10 03:33:13] 2026-01-10 08:32:31,224 | INFO     | 
[2026-01-10 03:33:13] 2026-01-10 08:32:31,225 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 03:33:13] 2026-01-10 08:32:31,224 | INFO     | time since job start (98822s) is within the limit (174528.0s)
[2026-01-10 03:33:13] 2026-01-10 08:32:31,373 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,374 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,374 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,374 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,398 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,398 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,398 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,399 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,399 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,399 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,399 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,399 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,400 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 03:33:13] 2026-01-10 08:32:31,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,400 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 03:33:13] 2026-01-10 08:32:31,400 | INFO     | job 6963076961 has completed (purged errors)
[2026-01-10 03:33:13] 2026-01-10 08:32:31,401 | INFO     | overall cleanup function is called
[2026-01-10 03:33:13] 2026-01-10 08:32:32,586 | INFO     | --- collectZombieJob: --- 10, [943760]
[2026-01-10 03:33:13] 2026-01-10 08:32:32,587 | INFO     | zombie collector waiting for pid 943760
[2026-01-10 03:33:13] 2026-01-10 08:32:32,587 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 03:33:13] 2026-01-10 08:32:32,587 | INFO     | collected zombie processes
[2026-01-10 03:33:13] 2026-01-10 08:32:32,588 | INFO     | will attempt to kill all subprocesses of pid=943760
[2026-01-10 03:33:13] 2026-01-10 08:32:35,261 | INFO     | PID=901237 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 03:33:13] 2026-01-10 08:32:35,261 | INFO     | .. there are 16 such processes running
[2026-01-10 03:33:13] 2026-01-10 08:32:35,426 | INFO     | process IDs to be killed: [943760] (in reverse order)
[2026-01-10 03:33:13] 2026-01-10 08:32:36,037 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 03:33:13] 2026-01-10 08:32:36,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 03:33:13] 2026-01-10 08:32:36,225 | INFO     | did not find any defunct processes belonging to 943760
[2026-01-10 03:33:13] 2026-01-10 08:32:36,400 | INFO     | did not find any defunct processes belonging to 943760
[2026-01-10 03:33:13] 2026-01-10 08:32:36,401 | INFO     | ready for new job
[2026-01-10 03:33:13] 2026-01-10 08:32:36,401 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 03:33:13] 2026-01-10 08:32:36,451 | INFO     | ***************************************
[2026-01-10 03:33:13] 2026-01-10 08:32:36,464 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 03:33:13] 2026-01-10 08:32:36,464 | INFO     | ***************************************
[2026-01-10 03:33:13] 2026-01-10 08:32:36,464 | INFO     | 
[2026-01-10 03:33:13] 2026-01-10 08:32:36,466 | INFO     | architecture information:
[2026-01-10 03:33:13] 2026-01-10 08:32:36,521 | INFO     | executing command: cat /etc/os-release
[2026-01-10 03:33:13] 2026-01-10 08:32:36,594 | INFO     | cat /etc/os-release:
[2026-01-10 03:33:13] NAME="CentOS Linux"
[2026-01-10 03:33:13] VERSION="7 (Core)"
[2026-01-10 03:33:13] ID="centos"
[2026-01-10 03:33:13] ID_LIKE="rhel fedora"
[2026-01-10 03:33:13] VERSION_ID="7"
[2026-01-10 03:33:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 03:33:13] ANSI_COLOR="0;31"
[2026-01-10 03:33:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 03:33:13] HOME_URL="https://www.centos.org/"
[2026-01-10 03:33:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 03:33:13] 
[2026-01-10 03:33:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 03:33:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 03:33:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 03:33:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 03:33:13] 
[2026-01-10 03:33:13] 2026-01-10 08:32:36,594 | INFO     | ***************************************
[2026-01-10 03:33:13] 2026-01-10 08:32:37,104 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 03:33:13] 2026-01-10 08:32:37,276 | INFO     | sufficient remaining disk space (52771684352 B)
[2026-01-10 03:33:13] 2026-01-10 08:32:37,277 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 03:33:13] 2026-01-10 08:32:37,277 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 03:33:13] 2026-01-10 08:32:37,277 | INFO     | update_server=False
[2026-01-10 03:33:13] 2026-01-10 08:32:37,277 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 03:33:13] 2026-01-10 08:32:37,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:33:13] 2026-01-10 08:32:37,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:33:13] 2026-01-10 08:32:37,285 | INFO     | aborting loop
[2026-01-10 03:33:13] 2026-01-10 08:32:37,292 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 03:33:13] 2026-01-10 08:32:37,396 | INFO     | all data control threads have been joined
[2026-01-10 03:33:13] 2026-01-10 08:32:38,283 | INFO     | [job] retrieve thread has finished
[2026-01-10 03:33:13] 2026-01-10 08:32:38,284 | INFO     | [job] queue monitor thread has finished
[2026-01-10 03:33:13] 2026-01-10 08:32:38,294 | INFO     | [job] job monitor thread has finished
[2026-01-10 03:33:13] 2026-01-10 08:32:38,402 | INFO     | [data] control thread has finished
[2026-01-10 03:33:13] 2026-01-10 08:32:38,417 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 03:33:13] 2026-01-10 08:32:38,418 | INFO     | [payload] failed_post thread has finished
[2026-01-10 03:33:13] 2026-01-10 08:32:38,422 | INFO     | [payload] validate_post thread has finished
[2026-01-10 03:33:13] 2026-01-10 08:32:38,531 | INFO     | all payload control threads have been joined
[2026-01-10 03:33:13] 2026-01-10 08:32:38,858 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 03:33:13] 2026-01-10 08:32:38,859 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 03:33:13] 2026-01-10 08:32:38,863 | INFO     | [data] copytool_in thread has finished
[2026-01-10 03:33:13] 2026-01-10 08:32:38,917 | INFO     | [job] validate thread has finished
[2026-01-10 03:33:13] 2026-01-10 08:32:38,920 | INFO     | all job control threads have been joined
[2026-01-10 03:33:13] 2026-01-10 08:32:38,964 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 03:33:13] 2026-01-10 08:32:39,304 | INFO     | [data] copytool_out thread has finished
[2026-01-10 03:33:13] 2026-01-10 08:32:39,537 | INFO     | [payload] control thread has finished
[2026-01-10 03:33:13] 2026-01-10 08:32:39,926 | INFO     | [job] control thread has finished
[2026-01-10 03:33:13] 2026-01-10 08:32:40,374 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 03:33:13] 2026-01-10 08:32:44,383 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 03:33:13] 2026-01-10 08:33:03,107 | INFO     | [monitor] cgroup control has ended
[2026-01-10 03:33:13] 2026-01-10 08:33:03,759 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594785789760)>', '<ExcThread(monitor, started 140594311575296)>']
[2026-01-10 03:33:13] 2026-01-10 08:33:08,790 | INFO     | all workflow threads have been joined
[2026-01-10 03:33:13] 2026-01-10 08:33:08,790 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 03:33:13] 2026-01-10 08:33:08,791 | INFO     | traces error code: 0
[2026-01-10 03:33:13] 2026-01-10 08:33:08,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 03:33:13] 2026-01-10 08:33:10,953 | INFO     | PID=901237 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 03:33:13] 2026-01-10 08:33:10,954 | INFO     | .. there are 16 such processes running
[2026-01-10 03:33:13] 2026-01-10 08:33:10,955 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 03:33:13] 2026-01-10 08:33:10,955 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 03:33:13] 2026-01-10 08:33:10,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 03:33:13] 2026-01-10 08:33:10,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 03:33:13] 2026-01-10 08:33:10,955 | INFO     | [monitor] control thread has ended
[2026-01-10 03:33:13] 2026-01-10 08:33:11,594 [wrapper] ==== pilot stdout END ====
[2026-01-10 03:33:13] 2026-01-10 08:33:11,655 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 03:33:13] 2026-01-10 08:33:11,709 [wrapper] pilotpid: 901237
[2026-01-10 03:33:13] 2026-01-10 08:33:11,771 [wrapper] Pilot exit status: 0
[2026-01-10 03:33:13] 2026-01-10 08:33:11,906 [wrapper] pandaids: 6963076961
[2026-01-10 03:33:13] 2026-01-10 08:33:12,547 [wrapper] cleanup supervisor_pilot  964427 901238
[2026-01-10 03:33:13] 2026-01-10 08:33:12,618 [wrapper] Test setup, not cleaning
[2026-01-10 03:33:13] 2026-01-10 08:33:12,621 [wrapper] apfmon messages muted
[2026-01-10 03:33:13] 2026-01-10 08:33:12,625 [wrapper] ==== wrapper stdout END ====
[2026-01-10 03:33:13] 2026-01-10 08:33:12,646 [wrapper] ==== wrapper stderr END ====
[2026-01-10 03:33:13]  *** Error codes and diagnostics ***
[2026-01-10 03:33:13]     "exeErrorCode": 0,
[2026-01-10 03:33:13]     "exeErrorDiag": "",
[2026-01-10 03:33:13]     "pilotErrorCode": 0,
[2026-01-10 03:33:13]     "pilotErrorDiag": "",
[2026-01-10 03:33:13]  *** Listing of results directory ***
[2026-01-10 03:33:13] total 580784
[2026-01-10 03:33:13] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-10 03:33:13] -rwx------. 1 boincer umatlas     36322 Jan  8 06:56 runpilot2-wrapper.sh
[2026-01-10 03:33:13] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:57 queuedata.json
[2026-01-10 03:33:13] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 03:33:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:03 run_atlas
[2026-01-10 03:33:13] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:03 job.xml
[2026-01-10 03:33:13] -rw-r--r--. 2 boincer umatlas 417267020 Jan  9 00:03 EVNT.47947080._000080.pool.root.1
[2026-01-10 03:33:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:03 start_atlas.sh
[2026-01-10 03:33:13] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:03 shared
[2026-01-10 03:33:13] -rw-r--r--. 2 boincer umatlas    592611 Jan  9 00:03 input.tar.gz
[2026-01-10 03:33:13] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:03 boinc_lockfile
[2026-01-10 03:33:13] -rw-r--r--. 1 boincer umatlas      2876 Jan  9 00:03 pandaJob.out
[2026-01-10 03:33:13] -rw-------. 1 boincer umatlas        57 Jan  9 00:03 setup.sh.local
[2026-01-10 03:33:13] -rw-------. 1 boincer umatlas    989771 Jan  9 00:05 agis_schedconf.cvmfs.json
[2026-01-10 03:33:13] drwx------. 5 boincer umatlas      4096 Jan  9 00:05 pilot3
[2026-01-10 03:33:13] -rw-r--r--. 1 boincer umatlas       533 Jan 10 01:45 boinc_task_state.xml
[2026-01-10 03:33:13] -rw-------. 1 boincer umatlas 148458441 Jan 10 03:30 HITS.47947082._005220.pool.root.1
[2026-01-10 03:33:13] -rw-------. 1 boincer umatlas      1055 Jan 10 03:31 memory_monitor_summary.json
[2026-01-10 03:33:13] -rw-------. 1 boincer umatlas   1516240 Jan 10 03:31 agis_ddmendpoints.agis.ALL.json
[2026-01-10 03:33:13] -rw-------. 1 boincer umatlas   2207347 Jan 10 03:31 log.47947082._005220.job.log.tgz.1
[2026-01-10 03:33:13] -rw-r--r--. 1 boincer umatlas      6526 Jan 10 03:31 init_data.xml
[2026-01-10 03:33:13] -rw-------. 1 boincer umatlas      8598 Jan 10 03:32 heartbeat.json
[2026-01-10 03:33:13] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 03:33 boinc_mmap_file
[2026-01-10 03:33:13] -rw-r--r--. 1 boincer umatlas        29 Jan 10 03:33 wrapper_checkpoint.txt
[2026-01-10 03:33:13] -rw-------. 1 boincer umatlas        95 Jan 10 03:33 pilot_heartbeat.json
[2026-01-10 03:33:13] -rw-------. 1 boincer umatlas       822 Jan 10 03:33 pilotlog.txt
[2026-01-10 03:33:13] -rw-------. 1 boincer umatlas  10333073 Jan 10 03:33 log.47947082._005220.job.log.1
[2026-01-10 03:33:13] -rw-------. 1 boincer umatlas       353 Jan 10 03:33 output.list
[2026-01-10 03:33:13] -rw-r--r--. 1 boincer umatlas       620 Jan 10 03:33 runtime_log
[2026-01-10 03:33:13] -rw-------. 1 boincer umatlas  12564480 Jan 10 03:33 result.tar.gz
[2026-01-10 03:33:13] -rw-r--r--. 1 boincer umatlas      9343 Jan 10 03:33 runtime_log.err
[2026-01-10 03:33:13] -rw-------. 1 boincer umatlas       660 Jan 10 03:33 dZHKDmOo3x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8UkKDmw5n9wn.diag
[2026-01-10 03:33:13] -rw-r--r--. 1 boincer umatlas     21782 Jan 10 03:33 stderr.txt
[2026-01-10 03:33:14] HITS file was successfully produced:
[2026-01-10 03:33:14] -rw-------. 1 boincer umatlas 148458441 Jan 10 03:30 shared/HITS.pool.root.1
[2026-01-10 03:33:14]  *** Contents of shared directory: ***
[2026-01-10 03:33:14] total 565340
[2026-01-10 03:33:14] -rw-r--r--. 2 boincer umatlas 417267020 Jan  9 00:03 ATLAS.root_0
[2026-01-10 03:33:14] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:03 start_atlas.sh
[2026-01-10 03:33:14] -rw-r--r--. 2 boincer umatlas    592611 Jan  9 00:03 input.tar.gz
[2026-01-10 03:33:14] -rw-------. 1 boincer umatlas 148458441 Jan 10 03:30 HITS.pool.root.1
[2026-01-10 03:33:14] -rw-------. 1 boincer umatlas  12564480 Jan 10 03:33 result.tar.gz
03:33:36 (884110): run_atlas exited; CPU time 105670.396472
03:33:36 (884110): called boinc_finish(0)

</stderr_txt>
]]>

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