Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:46 (1305801): wrapper (7.7.26015): starting
00:02:46 (1305801): wrapper: running run_atlas (--nthreads 11)
[2026-01-09 00:02:46] Arguments: --nthreads 11
[2026-01-09 00:02:46] Threads: 11
[2026-01-09 00:02:46] Checking for CVMFS
[2026-01-09 00:02:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:02:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:02:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:02:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:02:48] 2.13.3.0 12548 92962 384868 154931 0 66 29638638 40960000 10468 16776704 34 387777930 99.607 403618982 36438 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:02:48] CVMFS is ok
[2026-01-09 00:02:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:02:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:02:49] Further information can be found at the LHC@home message board.
[2026-01-09 00:02:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:02:49] Checking for apptainer binary...
[2026-01-09 00:02:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:02:49] Running /usr/bin/apptainer --version
[2026-01-09 00:02:49] apptainer version 1.4.5-2.el9
[2026-01-09 00:02:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:02:49] c7-11-12.aglt2.org
[2026-01-09 00:02:49] apptainer works
[2026-01-09 00:02:49] Set ATHENA_PROC_NUMBER=11
[2026-01-09 00:02:49] Set ATHENA_CORE_NUMBER=11
[2026-01-09 00:02:49] Starting ATLAS job with PandaID=6963152692
[2026-01-09 00:02:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 07:08:12]  *** The last 200 lines of the pilot log: ***
[2026-01-09 07:08:12] 2026-01-09 12:07:23,372 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 07:08:12] 2026-01-09 12:07:23,408 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3281.739375
[2026-01-09 07:08:12] 2026-01-09 12:07:23,429 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963152692/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 07:08:12] 2026-01-09 12:07:23,430 | INFO     | extracted standard info from prmon json
[2026-01-09 07:08:12] 2026-01-09 12:07:23,430 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 07:08:12] 2026-01-09 12:07:23,430 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 07:08:12] 2026-01-09 12:07:23,430 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 07:08:12] 2026-01-09 12:07:23,430 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 07:08:12] 2026-01-09 12:07:23,436 | INFO     | fitting pss+swap vs Time
[2026-01-09 07:08:12] 2026-01-09 12:07:23,436 | INFO     | sum of square deviations: 21844723199.21542
[2026-01-09 07:08:12] 2026-01-09 12:07:23,440 | INFO     | sum of deviations: 204860808599.80643
[2026-01-09 07:08:12] 2026-01-09 12:07:23,440 | INFO     | mean x: 1767947815.3292978
[2026-01-09 07:08:12] 2026-01-09 12:07:23,440 | INFO     | mean y: 2593353.88377724
[2026-01-09 07:08:12] 2026-01-09 12:07:23,440 | INFO     | intersect: -16577301740.58139
[2026-01-09 07:08:12] 2026-01-09 12:07:23,441 | INFO     | chi2: 6.855787396881803
[2026-01-09 07:08:12] 2026-01-09 12:07:23,441 | INFO     | sum of square deviations: 21060948289.330933
[2026-01-09 07:08:12] 2026-01-09 12:07:23,444 | INFO     | sum of deviations: 260957198134.5442
[2026-01-09 07:08:12] 2026-01-09 12:07:23,445 | INFO     | mean x: 1767947662.8308823
[2026-01-09 07:08:12] 2026-01-09 12:07:23,445 | INFO     | mean y: 2604184.544117647
[2026-01-09 07:08:12] 2026-01-09 12:07:23,445 | INFO     | intersect: -21903278789.13842
[2026-01-09 07:08:12] 2026-01-09 12:07:23,445 | INFO     | chi2: 5.299147445778138
[2026-01-09 07:08:12] 2026-01-09 12:07:23,445 | INFO     | current chi2=5.299147445778138 (change=22.705487509890805 %)
[2026-01-09 07:08:12] 2026-01-09 12:07:23,445 | INFO     | right removable region: 407
[2026-01-09 07:08:12] 2026-01-09 12:07:23,446 | INFO     | sum of square deviations: 21060890278.666706
[2026-01-09 07:08:12] 2026-01-09 12:07:23,449 | INFO     | sum of deviations: 57363872832.83332
[2026-01-09 07:08:12] 2026-01-09 12:07:23,449 | INFO     | mean x: 1767947967.8333333
[2026-01-09 07:08:12] 2026-01-09 12:07:23,449 | INFO     | mean y: 2622036.468137255
[2026-01-09 07:08:12] 2026-01-09 12:07:23,449 | INFO     | intersect: -4812765207.849142
[2026-01-09 07:08:12] 2026-01-09 12:07:23,450 | INFO     | chi2: 2.595571766518052
[2026-01-09 07:08:12] 2026-01-09 12:07:23,450 | INFO     | current chi2=2.595571766518052 (change=62.140427987912986 %)
[2026-01-09 07:08:12] 2026-01-09 12:07:23,450 | INFO     | sum of square deviations: 20296034458.104298
[2026-01-09 07:08:12] 2026-01-09 12:07:23,453 | INFO     | sum of deviations: -662846836.1488876
[2026-01-09 07:08:12] 2026-01-09 12:07:23,454 | INFO     | mean x: 1767948120.337469
[2026-01-09 07:08:12] 2026-01-09 12:07:23,454 | INFO     | mean y: 2633573.089330025
[2026-01-09 07:08:12] 2026-01-09 12:07:23,454 | INFO     | intersect: 60372872.87521149
[2026-01-09 07:08:12] 2026-01-09 12:07:23,454 | INFO     | chi2: 1.8412117208800511
[2026-01-09 07:08:12] 2026-01-09 12:07:23,454 | INFO     | current chi2=1.8412117208800511 (change=29.063347635730054 %)
[2026-01-09 07:08:12] 2026-01-09 12:07:23,455 | INFO     | sum of square deviations: 19549947635.70863
[2026-01-09 07:08:12] 2026-01-09 12:07:23,458 | INFO     | sum of deviations: -26990199962.69346
[2026-01-09 07:08:12] 2026-01-09 12:07:23,458 | INFO     | mean x: 1767948272.839196
[2026-01-09 07:08:12] 2026-01-09 12:07:23,458 | INFO     | mean y: 2638954.5829145727
[2026-01-09 07:08:12] 2026-01-09 12:07:23,458 | INFO     | intersect: 2443426945.261275
[2026-01-09 07:08:12] 2026-01-09 12:07:23,459 | INFO     | chi2: 1.7136272684966092
[2026-01-09 07:08:12] 2026-01-09 12:07:23,459 | INFO     | current chi2=1.7136272684966092 (change=6.929374331945917 %)
[2026-01-09 07:08:12] 2026-01-09 12:07:23,459 | INFO     | left removable region: 30
[2026-01-09 07:08:12] 2026-01-09 12:07:23,459 | INFO     | sum of square deviations: 16615775988.079462
[2026-01-09 07:08:12] 2026-01-09 12:07:23,462 | INFO     | sum of deviations: 9722333444.071617
[2026-01-09 07:08:12] 2026-01-09 12:07:23,462 | INFO     | mean x: 1767948547.352785
[2026-01-09 07:08:12] 2026-01-09 12:07:23,462 | INFO     | mean y: 2655082.2175066313
[2026-01-09 07:08:12] 2026-01-09 12:07:23,463 | INFO     | intersect: -1031818739.6285089
[2026-01-09 07:08:12] 2026-01-09 12:07:23,463 | INFO     | chi2: 0.010960986387136492
[2026-01-09 07:08:12] 2026-01-09 12:07:23,463 | INFO     | current memory leak: 0.59 B/s (using 377 data points, chi2=0.01)
[2026-01-09 07:08:12] 2026-01-09 12:07:23,464 | INFO     | could have reported an average CPU frequency of 3280 MHz (17 samples)
[2026-01-09 07:08:12] 2026-01-09 12:07:23,464 | INFO     | ..............................
[2026-01-09 07:08:12] 2026-01-09 12:07:23,464 | INFO     | . Timing measurements:
[2026-01-09 07:08:12] 2026-01-09 12:07:23,464 | INFO     | . get job = 0 s
[2026-01-09 07:08:12] 2026-01-09 12:07:23,464 | INFO     | . initial setup = 8 s
[2026-01-09 07:08:12] 2026-01-09 12:07:23,464 | INFO     | . payload setup = 60 s
[2026-01-09 07:08:12] 2026-01-09 12:07:23,464 | INFO     | . stage-in = 0 s
[2026-01-09 07:08:12] 2026-01-09 12:07:23,464 | INFO     | . payload execution = 25187 s
[2026-01-09 07:08:12] 2026-01-09 12:07:23,464 | INFO     | . stage-out = 6 s
[2026-01-09 07:08:12] 2026-01-09 12:07:23,464 | INFO     | . log creation = 1 s
[2026-01-09 07:08:12] 2026-01-09 12:07:23,464 | INFO     | ..............................
[2026-01-09 07:08:12] 2026-01-09 12:07:23,661 | INFO     | 
[2026-01-09 07:08:12] 2026-01-09 12:07:23,661 | INFO     | job summary report
[2026-01-09 07:08:12] 2026-01-09 12:07:23,661 | INFO     | --------------------------------------------------
[2026-01-09 07:08:12] 2026-01-09 12:07:23,661 | INFO     | PanDA job id: 6963152692
[2026-01-09 07:08:12] 2026-01-09 12:07:23,661 | INFO     | task id: 47898826
[2026-01-09 07:08:12] 2026-01-09 12:07:23,661 | INFO     | errors: (none)
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | pilot state: finished 
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | transexitcode: 0
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | exeerrorcode: 0
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | exeerrordiag: 
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | exitcode: 0
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | exitmsg: OK
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | cpuconsumptiontime: 48007 s
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | nevents: 400
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | neventsw: 0
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | pid: 1333827
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | pgrp: 1333827
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | corecount: 11
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | event service: False
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | sizes: {0: 2283138, 1: 2283823, 2: 2283851, 3: 2284050, 14: 2284050, 24: 2284078, 35: 2284234, 39: 2284524, 46: 2284552, 25253: 2320479, 25254: 2320478, 25260: 232
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | --------------------------------------------------
[2026-01-09 07:08:12] 2026-01-09 12:07:23,662 | INFO     | 
[2026-01-09 07:08:12] 2026-01-09 12:07:23,663 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 07:08:12] 2026-01-09 12:07:23,874 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,875 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,875 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,875 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,875 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,875 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,875 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,875 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,875 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,875 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,875 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,875 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,875 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,875 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,876 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,876 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,876 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,876 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 07:08:12] 2026-01-09 12:07:23,876 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,876 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 07:08:12] 2026-01-09 12:07:23,876 | INFO     | job 6963152692 has completed (purged errors)
[2026-01-09 07:08:12] 2026-01-09 12:07:23,876 | INFO     | overall cleanup function is called
[2026-01-09 07:08:12] 2026-01-09 12:07:24,094 | INFO     | PID=1315293 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 07:08:12] 2026-01-09 12:07:24,094 | INFO     | .. there are 10 such processes running
[2026-01-09 07:08:12] 2026-01-09 12:07:24,905 | INFO     | --- collectZombieJob: --- 10, [1333827]
[2026-01-09 07:08:12] 2026-01-09 12:07:24,905 | INFO     | zombie collector waiting for pid 1333827
[2026-01-09 07:08:12] 2026-01-09 12:07:24,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 07:08:12] 2026-01-09 12:07:24,905 | INFO     | collected zombie processes
[2026-01-09 07:08:12] 2026-01-09 12:07:24,905 | INFO     | will attempt to kill all subprocesses of pid=1333827
[2026-01-09 07:08:12] 2026-01-09 12:07:25,470 | INFO     | process IDs to be killed: [1333827] (in reverse order)
[2026-01-09 07:08:12] 2026-01-09 12:07:25,615 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 07:08:12] 2026-01-09 12:07:25,616 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 07:08:12] 2026-01-09 12:07:25,631 | INFO     | did not find any defunct processes belonging to 1333827
[2026-01-09 07:08:12] 2026-01-09 12:07:25,643 | INFO     | did not find any defunct processes belonging to 1333827
[2026-01-09 07:08:12] 2026-01-09 12:07:25,644 | INFO     | ready for new job
[2026-01-09 07:08:12] 2026-01-09 12:07:25,644 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 07:08:12] 2026-01-09 12:07:25,646 | INFO     | ***************************************
[2026-01-09 07:08:12] 2026-01-09 12:07:25,647 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 07:08:12] 2026-01-09 12:07:25,647 | INFO     | ***************************************
[2026-01-09 07:08:12] 2026-01-09 12:07:25,647 | INFO     | 
[2026-01-09 07:08:12] 2026-01-09 12:07:25,650 | INFO     | architecture information:
[2026-01-09 07:08:12] 2026-01-09 12:07:25,651 | INFO     | executing command: cat /etc/os-release
[2026-01-09 07:08:12] 2026-01-09 12:07:25,795 | INFO     | cat /etc/os-release:
[2026-01-09 07:08:12] NAME="CentOS Linux"
[2026-01-09 07:08:12] VERSION="7 (Core)"
[2026-01-09 07:08:12] ID="centos"
[2026-01-09 07:08:12] ID_LIKE="rhel fedora"
[2026-01-09 07:08:12] VERSION_ID="7"
[2026-01-09 07:08:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 07:08:12] ANSI_COLOR="0;31"
[2026-01-09 07:08:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 07:08:12] HOME_URL="https://www.centos.org/"
[2026-01-09 07:08:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 07:08:12] 
[2026-01-09 07:08:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 07:08:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 07:08:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 07:08:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 07:08:12] 
[2026-01-09 07:08:12] 2026-01-09 12:07:25,796 | INFO     | ***************************************
[2026-01-09 07:08:12] 2026-01-09 12:07:26,299 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 07:08:12] 2026-01-09 12:07:26,492 | INFO     | sufficient remaining disk space (85197848576 B)
[2026-01-09 07:08:12] 2026-01-09 12:07:26,493 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 07:08:12] 2026-01-09 12:07:26,493 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 07:08:12] 2026-01-09 12:07:26,493 | INFO     | update_server=False
[2026-01-09 07:08:12] 2026-01-09 12:07:26,493 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 07:08:12] 2026-01-09 12:07:26,494 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 07:08:12] 2026-01-09 12:07:26,750 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:08:12] 2026-01-09 12:07:26,750 | INFO     | aborting loop
[2026-01-09 07:08:12] 2026-01-09 12:07:26,838 | INFO     | all payload control threads have been joined
[2026-01-09 07:08:12] 2026-01-09 12:07:27,144 | INFO     | all data control threads have been joined
[2026-01-09 07:08:12] 2026-01-09 12:07:27,499 | INFO     | [job] retrieve thread has finished
[2026-01-09 07:08:12] 2026-01-09 12:07:27,504 | INFO     | [job] validate thread has finished
[2026-01-09 07:08:12] 2026-01-09 12:07:27,757 | INFO     | [job] job monitor thread has finished
[2026-01-09 07:08:12] 2026-01-09 12:07:27,844 | INFO     | [payload] control thread has finished
[2026-01-09 07:08:12] 2026-01-09 12:07:27,924 | INFO     | all job control threads have been joined
[2026-01-09 07:08:12] 2026-01-09 12:07:28,150 | INFO     | [data] control thread has finished
[2026-01-09 07:08:12] 2026-01-09 12:07:28,290 | INFO     | [payload] validate_post thread has finished
[2026-01-09 07:08:12] 2026-01-09 12:07:28,452 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 07:08:12] 2026-01-09 12:07:28,505 | INFO     | [data] copytool_out thread has finished
[2026-01-09 07:08:12] 2026-01-09 12:07:28,676 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:08:12] 2026-01-09 12:07:28,694 | INFO     | [data] copytool_in thread has finished
[2026-01-09 07:08:12] 2026-01-09 12:07:28,754 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 07:08:12] 2026-01-09 12:07:28,929 | INFO     | [job] control thread has finished
[2026-01-09 07:08:12] 2026-01-09 12:07:28,960 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 07:08:12] 2026-01-09 12:07:28,967 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 07:08:12] 2026-01-09 12:07:29,006 | INFO     | [payload] failed_post thread has finished
[2026-01-09 07:08:12] 2026-01-09 12:07:29,120 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 07:08:12] 2026-01-09 12:07:29,682 | INFO     | [job] queue monitor thread has finished
[2026-01-09 07:08:12] 2026-01-09 12:07:33,133 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 07:08:12] 2026-01-09 12:07:57,581 | INFO     | PID=1315293 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 07:08:12] 2026-01-09 12:07:57,615 | INFO     | .. there are 10 such processes running
[2026-01-09 07:08:12] 2026-01-09 12:07:57,615 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 07:08:12] 2026-01-09 12:07:57,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 07:08:12] 2026-01-09 12:07:57,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 07:08:12] 2026-01-09 12:08:03,890 | INFO     | [monitor] cgroup control has ended
[2026-01-09 07:08:12] 2026-01-09 12:08:04,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139954405975872)>', '<ExcThread(monitor, started 139953874900736)>']
[2026-01-09 07:08:12] 2026-01-09 12:08:05,665 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 07:08:12] 2026-01-09 12:08:05,665 | INFO     | [monitor] control thread has ended
[2026-01-09 07:08:12] 2026-01-09 12:08:09,819 | INFO     | all workflow threads have been joined
[2026-01-09 07:08:12] 2026-01-09 12:08:09,819 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 07:08:12] 2026-01-09 12:08:09,819 | INFO     | traces error code: 0
[2026-01-09 07:08:12] 2026-01-09 12:08:09,819 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 07:08:12] 2026-01-09 12:08:10,274 [wrapper] ==== pilot stdout END ====
[2026-01-09 07:08:12] 2026-01-09 12:08:10,341 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 07:08:12] 2026-01-09 12:08:10,407 [wrapper] pilotpid: 1315293
[2026-01-09 07:08:12] 2026-01-09 12:08:10,475 [wrapper] Pilot exit status: 0
[2026-01-09 07:08:12] 2026-01-09 12:08:10,653 [wrapper] pandaids: 6963152692
[2026-01-09 07:08:12] 2026-01-09 12:08:11,400 [wrapper] cleanup supervisor_pilot 2328794 1315296
[2026-01-09 07:08:12] 2026-01-09 12:08:11,443 [wrapper] Test setup, not cleaning
[2026-01-09 07:08:12] 2026-01-09 12:08:11,476 [wrapper] apfmon messages muted
[2026-01-09 07:08:12] 2026-01-09 12:08:11,521 [wrapper] ==== wrapper stdout END ====
[2026-01-09 07:08:12] 2026-01-09 12:08:11,562 [wrapper] ==== wrapper stderr END ====
[2026-01-09 07:08:12]  *** Error codes and diagnostics ***
[2026-01-09 07:08:12]     "exeErrorCode": 0,
[2026-01-09 07:08:12]     "exeErrorDiag": "",
[2026-01-09 07:08:12]     "pilotErrorCode": 0,
[2026-01-09 07:08:12]     "pilotErrorDiag": "",
[2026-01-09 07:08:12]  *** Listing of results directory ***
[2026-01-09 07:08:12] total 441376
[2026-01-09 07:08:12] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 07:08:12] -rwx------. 1 boincer umatlas     36322 Jan  8 11:06 runpilot2-wrapper.sh
[2026-01-09 07:08:12] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 07:08:12] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 07:08:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:02 run_atlas
[2026-01-09 07:08:12] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:02 job.xml
[2026-01-09 07:08:12] -rw-r--r--. 2 boincer umatlas 226348933 Jan  9 00:02 EVNT.47898824._000879.pool.root.1
[2026-01-09 07:08:12] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-09 07:08:12] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:02 shared
[2026-01-09 07:08:12] -rw-r--r--. 2 boincer umatlas    592392 Jan  9 00:02 input.tar.gz
[2026-01-09 07:08:12] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:02 boinc_lockfile
[2026-01-09 07:08:12] -rw-r--r--. 1 boincer umatlas      2517 Jan  9 00:02 pandaJob.out
[2026-01-09 07:08:12] -rw-------. 1 boincer umatlas        57 Jan  9 00:02 setup.sh.local
[2026-01-09 07:08:12] -rw-------. 1 boincer umatlas    989771 Jan  9 00:04 agis_schedconf.cvmfs.json
[2026-01-09 07:08:12] drwx------. 5 boincer umatlas      4096 Jan  9 00:04 pilot3
[2026-01-09 07:08:12] -rw-r--r--. 1 boincer umatlas      6902 Jan  9 07:04 init_data.xml
[2026-01-09 07:08:12] -rw-------. 1 boincer umatlas 213976739 Jan  9 07:04 HITS.47898826._029450.pool.root.1
[2026-01-09 07:08:12] -rw-r--r--. 1 boincer umatlas       530 Jan  9 07:05 boinc_task_state.xml
[2026-01-09 07:08:12] -rw-------. 1 boincer umatlas      1029 Jan  9 07:06 memory_monitor_summary.json
[2026-01-09 07:08:12] -rw-------. 1 boincer umatlas   1516240 Jan  9 07:06 agis_ddmendpoints.agis.ALL.json
[2026-01-09 07:08:12] -rw-------. 1 boincer umatlas    632118 Jan  9 07:06 log.47898826._029450.job.log.tgz.1
[2026-01-09 07:08:12] -rw-------. 1 boincer umatlas        95 Jan  9 07:07 pilot_heartbeat.json
[2026-01-09 07:08:12] -rw-------. 1 boincer umatlas      7773 Jan  9 07:07 heartbeat.json
[2026-01-09 07:08:12] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 07:08 boinc_mmap_file
[2026-01-09 07:08:12] -rw-r--r--. 1 boincer umatlas        27 Jan  9 07:08 wrapper_checkpoint.txt
[2026-01-09 07:08:12] -rw-------. 1 boincer umatlas      4824 Jan  9 07:08 pilotlog.txt
[2026-01-09 07:08:12] -rw-------. 1 boincer umatlas   3231414 Jan  9 07:08 log.47898826._029450.job.log.1
[2026-01-09 07:08:12] -rw-------. 1 boincer umatlas       357 Jan  9 07:08 output.list
[2026-01-09 07:08:12] -rw-r--r--. 1 boincer umatlas       620 Jan  9 07:08 runtime_log
[2026-01-09 07:08:12] -rw-------. 1 boincer umatlas   3880960 Jan  9 07:08 result.tar.gz
[2026-01-09 07:08:12] -rw-r--r--. 1 boincer umatlas      9345 Jan  9 07:08 runtime_log.err
[2026-01-09 07:08:12] -rw-------. 1 boincer umatlas       659 Jan  9 07:08 drzKDmNi7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmasfKDm3vfiHo.diag
[2026-01-09 07:08:12] -rw-r--r--. 1 boincer umatlas     20998 Jan  9 07:08 stderr.txt
[2026-01-09 07:08:12] HITS file was successfully produced:
[2026-01-09 07:08:12] -rw-------. 1 boincer umatlas 213976739 Jan  9 07:04 shared/HITS.pool.root.1
[2026-01-09 07:08:12]  *** Contents of shared directory: ***
[2026-01-09 07:08:12] total 434404
[2026-01-09 07:08:12] -rw-r--r--. 2 boincer umatlas 226348933 Jan  9 00:02 ATLAS.root_0
[2026-01-09 07:08:12] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-09 07:08:12] -rw-r--r--. 2 boincer umatlas    592392 Jan  9 00:02 input.tar.gz
[2026-01-09 07:08:12] -rw-------. 1 boincer umatlas 213976739 Jan  9 07:04 HITS.pool.root.1
[2026-01-09 07:08:12] -rw-------. 1 boincer umatlas   3880960 Jan  9 07:08 result.tar.gz
07:08:14 (1305801): run_atlas exited; CPU time 48496.233452
07:08:14 (1305801): called boinc_finish(0)

</stderr_txt>
]]>

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