Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:07:59 (28388): wrapper (7.7.26015): starting
00:07:59 (28388): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:07:59] Arguments: --nthreads 8
[2026-01-09 00:07:59] Threads: 8
[2026-01-09 00:07:59] Checking for CVMFS
[2026-01-09 00:08:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:08:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:08:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:08:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:08:00] 2.11.2.0 2893 128633 80612 154931 3 57 19349255 20275200 1 130560 0 31950367 99.808 8478506 33351 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:08:00] CVMFS is ok
[2026-01-09 00:08:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:08:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:08:00] Further information can be found at the LHC@home message board.
[2026-01-09 00:08:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:08:00] Checking for apptainer binary...
[2026-01-09 00:08:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:08:00] Running /usr/bin/apptainer --version
[2026-01-09 00:08:00] apptainer version 1.3.2-1.el7
[2026-01-09 00:08:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:08:02] c-204-22.aglt2.org
[2026-01-09 00:08:02] apptainer works
[2026-01-09 00:08:02] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:08:02] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:08:02] Starting ATLAS job with PandaID=6963152171
[2026-01-09 00:08:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:13:14 (4941): wrapper (7.7.26015): starting
01:13:14 (4941): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 01:13:14] Arguments: --nthreads 8
[2026-01-09 01:13:14] Threads: 8
[2026-01-09 01:13:14] This job has been restarted, cleaning up previous attempt
[2026-01-09 01:13:14] Checking for CVMFS
[2026-01-09 01:13:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 01:13:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 01:13:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 01:13:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 01:13:15] 2.11.2.0 2893 128699 81516 154933 2 39 19451835 20275201 1 130560 0 32016903 99.808 8481268 33353 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 01:13:15] CVMFS is ok
[2026-01-09 01:13:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 01:13:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 01:13:15] Further information can be found at the LHC@home message board.
[2026-01-09 01:13:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 01:13:15] Checking for apptainer binary...
[2026-01-09 01:13:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 01:13:15] Running /usr/bin/apptainer --version
[2026-01-09 01:13:15] apptainer version 1.3.2-1.el7
[2026-01-09 01:13:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 01:13:17] c-204-22.aglt2.org
[2026-01-09 01:13:17] apptainer works
[2026-01-09 01:13:17] Set ATHENA_PROC_NUMBER=8
[2026-01-09 01:13:17] Set ATHENA_CORE_NUMBER=8
[2026-01-09 01:13:17] Starting ATLAS job with PandaID=6963152171
[2026-01-09 01:13:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 04:20:58]  *** The last 200 lines of the pilot log: ***
[2026-01-09 04:20:58] 2026-01-09 09:20:21,851 | INFO     | monitor loop #819: job 0:6963152171 is in state 'finished'
[2026-01-09 04:20:58] 2026-01-09 09:20:21,851 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 04:20:58] 2026-01-09 09:20:23,799 | INFO     | time since job start (11208s) is within the limit (349056.0s)
[2026-01-09 04:20:58] 2026-01-09 09:20:24,126 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 04:20:58] 2026-01-09 09:20:24,129 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2026-01-09 04:20:58] 2026-01-09 09:20:24,131 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963152171/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 04:20:58] 2026-01-09 09:20:24,133 | INFO     | extracted standard info from prmon json
[2026-01-09 04:20:58] 2026-01-09 09:20:24,133 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 04:20:58] 2026-01-09 09:20:24,133 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 04:20:58] 2026-01-09 09:20:24,133 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 04:20:58] 2026-01-09 09:20:24,134 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 04:20:58] 2026-01-09 09:20:24,137 | INFO     | fitting pss+swap vs Time
[2026-01-09 04:20:58] 2026-01-09 09:20:24,138 | INFO     | sum of square deviations: 1931646793.4565222
[2026-01-09 04:20:58] 2026-01-09 09:20:24,139 | INFO     | sum of deviations: 14951057745.706526
[2026-01-09 04:20:58] 2026-01-09 09:20:24,139 | INFO     | mean x: 1767944828.5543478
[2026-01-09 04:20:58] 2026-01-09 09:20:24,139 | INFO     | mean y: 2476842.179347826
[2026-01-09 04:20:58] 2026-01-09 09:20:24,140 | INFO     | intersect: -13681518240.400032
[2026-01-09 04:20:58] 2026-01-09 09:20:24,140 | INFO     | chi2: 2.334837944137408
[2026-01-09 04:20:58] 2026-01-09 09:20:24,140 | INFO     | sum of square deviations: 1778419063.4413378
[2026-01-09 04:20:58] 2026-01-09 09:20:24,141 | INFO     | sum of deviations: 26638387224.212265
[2026-01-09 04:20:58] 2026-01-09 09:20:24,141 | INFO     | mean x: 1767944676.055866
[2026-01-09 04:20:58] 2026-01-09 09:20:24,142 | INFO     | mean y: 2488208.1787709496
[2026-01-09 04:20:58] 2026-01-09 09:20:24,142 | INFO     | intersect: -26479006418.08153
[2026-01-09 04:20:58] 2026-01-09 09:20:24,142 | INFO     | chi2: 1.5712863995847097
[2026-01-09 04:20:58] 2026-01-09 09:20:24,142 | INFO     | current chi2=1.5712863995847097 (change=32.702549933708056 %)
[2026-01-09 04:20:58] 2026-01-09 09:20:24,143 | INFO     | sum of square deviations: 1633517070.925288
[2026-01-09 04:20:58] 2026-01-09 09:20:24,144 | INFO     | sum of deviations: 25943178396.55173
[2026-01-09 04:20:58] 2026-01-09 09:20:24,144 | INFO     | mean x: 1767944523.5574713
[2026-01-09 04:20:58] 2026-01-09 09:20:24,144 | INFO     | mean y: 2487476.3448275863
[2026-01-09 04:20:58] 2026-01-09 09:20:24,144 | INFO     | intersect: -28075639765.92377
[2026-01-09 04:20:58] 2026-01-09 09:20:24,144 | INFO     | chi2: 1.572310573390706
[2026-01-09 04:20:58] 2026-01-09 09:20:24,144 | INFO     | current chi2=1.572310573390706 (change=-0.06518059382852576 %)
[2026-01-09 04:20:58] 2026-01-09 09:20:24,144 | INFO     | right removable region: 173
[2026-01-09 04:20:58] 2026-01-09 09:20:24,145 | INFO     | sum of square deviations: 1778412963.4413378
[2026-01-09 04:20:58] 2026-01-09 09:20:24,146 | INFO     | sum of deviations: -15892931557.268156
[2026-01-09 04:20:58] 2026-01-09 09:20:24,146 | INFO     | mean x: 1767944981.055866
[2026-01-09 04:20:58] 2026-01-09 09:20:24,146 | INFO     | mean y: 2507234.8268156424
[2026-01-09 04:20:58] 2026-01-09 09:20:24,146 | INFO     | intersect: 15801890819.25909
[2026-01-09 04:20:58] 2026-01-09 09:20:24,146 | INFO     | chi2: 0.8367534941768826
[2026-01-09 04:20:58] 2026-01-09 09:20:24,147 | INFO     | current chi2=0.8367534941768826 (change=64.16224533793003 %)
[2026-01-09 04:20:58] 2026-01-09 09:20:24,147 | INFO     | sum of square deviations: 1633504870.925288
[2026-01-09 04:20:58] 2026-01-09 09:20:24,148 | INFO     | sum of deviations: -19458802456.758625
[2026-01-09 04:20:58] 2026-01-09 09:20:24,148 | INFO     | mean x: 1767945133.5574713
[2026-01-09 04:20:58] 2026-01-09 09:20:24,148 | INFO     | mean y: 2510925.275862069
[2026-01-09 04:20:58] 2026-01-09 09:20:24,148 | INFO     | intersect: 21062806318.699295
[2026-01-09 04:20:58] 2026-01-09 09:20:24,148 | INFO     | chi2: 0.7980703873721088
[2026-01-09 04:20:58] 2026-01-09 09:20:24,149 | INFO     | current chi2=0.7980703873721088 (change=4.622999135823931 %)
[2026-01-09 04:20:58] 2026-01-09 09:20:24,149 | INFO     | left removable region: 20
[2026-01-09 04:20:58] 2026-01-09 09:20:24,149 | INFO     | sum of square deviations: 1110572885.3464038
[2026-01-09 04:20:58] 2026-01-09 09:20:24,150 | INFO     | sum of deviations: -6404957918.235291
[2026-01-09 04:20:58] 2026-01-09 09:20:24,150 | INFO     | mean x: 1767945103.0653596
[2026-01-09 04:20:58] 2026-01-09 09:20:24,150 | INFO     | mean y: 2523323.8235294116
[2026-01-09 04:20:58] 2026-01-09 09:20:24,150 | INFO     | intersect: 10198714979.764942
[2026-01-09 04:20:58] 2026-01-09 09:20:24,150 | INFO     | chi2: 0.011450231836811185
[2026-01-09 04:20:58] 2026-01-09 09:20:24,151 | INFO     | current memory leak: -5.77 B/s (using 153 data points, chi2=0.01)
[2026-01-09 04:20:58] 2026-01-09 09:20:24,151 | INFO     | could have reported an average CPU frequency of 2005 MHz (10 samples)
[2026-01-09 04:20:58] 2026-01-09 09:20:24,151 | INFO     | ..............................
[2026-01-09 04:20:58] 2026-01-09 09:20:24,151 | INFO     | . Timing measurements:
[2026-01-09 04:20:58] 2026-01-09 09:20:24,151 | INFO     | . get job = 0 s
[2026-01-09 04:20:58] 2026-01-09 09:20:24,152 | INFO     | . initial setup = 1 s
[2026-01-09 04:20:58] 2026-01-09 09:20:24,152 | INFO     | . payload setup = 8 s
[2026-01-09 04:20:58] 2026-01-09 09:20:24,152 | INFO     | . stage-in = 0 s
[2026-01-09 04:20:58] 2026-01-09 09:20:24,152 | INFO     | . payload execution = 11170 s
[2026-01-09 04:20:58] 2026-01-09 09:20:24,152 | INFO     | . stage-out = 2 s
[2026-01-09 04:20:58] 2026-01-09 09:20:24,152 | INFO     | . log creation = 0 s
[2026-01-09 04:20:58] 2026-01-09 09:20:24,152 | INFO     | ..............................
[2026-01-09 04:20:58] 2026-01-09 09:20:24,588 | INFO     | 
[2026-01-09 04:20:58] 2026-01-09 09:20:24,588 | INFO     | job summary report
[2026-01-09 04:20:58] 2026-01-09 09:20:24,588 | INFO     | --------------------------------------------------
[2026-01-09 04:20:58] 2026-01-09 09:20:24,588 | INFO     | PanDA job id: 6963152171
[2026-01-09 04:20:58] 2026-01-09 09:20:24,588 | INFO     | task id: 47898826
[2026-01-09 04:20:58] 2026-01-09 09:20:24,589 | INFO     | errors: (none)
[2026-01-09 04:20:58] 2026-01-09 09:20:24,589 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 04:20:58] 2026-01-09 09:20:24,589 | INFO     | pilot state: finished 
[2026-01-09 04:20:58] 2026-01-09 09:20:24,589 | INFO     | transexitcode: 0
[2026-01-09 04:20:58] 2026-01-09 09:20:24,589 | INFO     | exeerrorcode: 0
[2026-01-09 04:20:58] 2026-01-09 09:20:24,590 | INFO     | exeerrordiag: 
[2026-01-09 04:20:58] 2026-01-09 09:20:24,590 | INFO     | exitcode: 0
[2026-01-09 04:20:58] 2026-01-09 09:20:24,590 | INFO     | exitmsg: OK
[2026-01-09 04:20:58] 2026-01-09 09:20:24,590 | INFO     | cpuconsumptiontime: 79682 s
[2026-01-09 04:20:58] 2026-01-09 09:20:24,590 | INFO     | nevents: 400
[2026-01-09 04:20:58] 2026-01-09 09:20:24,590 | INFO     | neventsw: 0
[2026-01-09 04:20:58] 2026-01-09 09:20:24,591 | INFO     | pid: 16160
[2026-01-09 04:20:58] 2026-01-09 09:20:24,591 | INFO     | pgrp: 16160
[2026-01-09 04:20:58] 2026-01-09 09:20:24,591 | INFO     | corecount: 8
[2026-01-09 04:20:58] 2026-01-09 09:20:24,591 | INFO     | event service: False
[2026-01-09 04:20:58] 2026-01-09 09:20:24,591 | INFO     | sizes: {0: 2283143, 1: 2283999, 7: 2284261, 12: 2284289, 11182: 2313522, 11185: 2322704, 11191: 2322842}
[2026-01-09 04:20:58] 2026-01-09 09:20:24,591 | INFO     | --------------------------------------------------
[2026-01-09 04:20:58] 2026-01-09 09:20:24,592 | INFO     | 
[2026-01-09 04:20:58] 2026-01-09 09:20:24,592 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 04:20:58] 2026-01-09 09:20:24,619 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,620 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,620 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,620 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,621 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,621 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,621 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,622 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,622 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,622 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,622 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,622 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,623 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 04:20:58] 2026-01-09 09:20:24,623 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,623 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 04:20:58] 2026-01-09 09:20:24,623 | INFO     | job 6963152171 has completed (purged errors)
[2026-01-09 04:20:58] 2026-01-09 09:20:24,624 | INFO     | overall cleanup function is called
[2026-01-09 04:20:58] 2026-01-09 09:20:25,631 | INFO     | --- collectZombieJob: --- 10, [16160]
[2026-01-09 04:20:58] 2026-01-09 09:20:25,632 | INFO     | zombie collector waiting for pid 16160
[2026-01-09 04:20:58] 2026-01-09 09:20:25,632 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 04:20:58] 2026-01-09 09:20:25,632 | INFO     | collected zombie processes
[2026-01-09 04:20:58] 2026-01-09 09:20:25,632 | INFO     | will attempt to kill all subprocesses of pid=16160
[2026-01-09 04:20:58] 2026-01-09 09:20:25,725 | INFO     | process IDs to be killed: [16160] (in reverse order)
[2026-01-09 04:20:58] 2026-01-09 09:20:25,784 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 04:20:58] 2026-01-09 09:20:25,784 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 04:20:58] 2026-01-09 09:20:25,789 | INFO     | did not find any defunct processes belonging to 16160
[2026-01-09 04:20:58] 2026-01-09 09:20:25,793 | INFO     | did not find any defunct processes belonging to 16160
[2026-01-09 04:20:58] 2026-01-09 09:20:25,793 | INFO     | ready for new job
[2026-01-09 04:20:58] 2026-01-09 09:20:25,794 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 04:20:58] 2026-01-09 09:20:25,795 | INFO     | ***************************************
[2026-01-09 04:20:58] 2026-01-09 09:20:25,796 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 04:20:58] 2026-01-09 09:20:25,796 | INFO     | ***************************************
[2026-01-09 04:20:58] 2026-01-09 09:20:25,796 | INFO     | 
[2026-01-09 04:20:58] 2026-01-09 09:20:25,796 | INFO     | architecture information:
[2026-01-09 04:20:58] 2026-01-09 09:20:25,797 | INFO     | executing command: cat /etc/os-release
[2026-01-09 04:20:58] 2026-01-09 09:20:25,814 | INFO     | cat /etc/os-release:
[2026-01-09 04:20:58] NAME="CentOS Linux"
[2026-01-09 04:20:58] VERSION="7 (Core)"
[2026-01-09 04:20:58] ID="centos"
[2026-01-09 04:20:58] ID_LIKE="rhel fedora"
[2026-01-09 04:20:58] VERSION_ID="7"
[2026-01-09 04:20:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 04:20:58] ANSI_COLOR="0;31"
[2026-01-09 04:20:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 04:20:58] HOME_URL="https://www.centos.org/"
[2026-01-09 04:20:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 04:20:58] 
[2026-01-09 04:20:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 04:20:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 04:20:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 04:20:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 04:20:58] 
[2026-01-09 04:20:58] 2026-01-09 09:20:25,814 | INFO     | ***************************************
[2026-01-09 04:20:58] 2026-01-09 09:20:26,317 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 04:20:58] 2026-01-09 09:20:26,337 | INFO     | sufficient remaining disk space (18503172096 B)
[2026-01-09 04:20:58] 2026-01-09 09:20:26,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 04:20:58] 2026-01-09 09:20:26,337 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 04:20:58] 2026-01-09 09:20:26,338 | INFO     | update_server=False
[2026-01-09 04:20:58] 2026-01-09 09:20:26,338 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 04:20:58] 2026-01-09 09:20:26,338 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 04:20:58] 2026-01-09 09:20:26,339 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 04:20:58] 2026-01-09 09:20:26,339 | INFO     | aborting loop
[2026-01-09 04:20:58] 2026-01-09 09:20:26,639 | INFO     | all payload control threads have been joined
[2026-01-09 04:20:58] 2026-01-09 09:20:27,125 | INFO     | all job control threads have been joined
[2026-01-09 04:20:58] 2026-01-09 09:20:27,343 | INFO     | [job] retrieve thread has finished
[2026-01-09 04:20:58] 2026-01-09 09:20:27,345 | INFO     | [job] job monitor thread has finished
[2026-01-09 04:20:58] 2026-01-09 09:20:27,369 | INFO     | [payload] validate_post thread has finished
[2026-01-09 04:20:58] 2026-01-09 09:20:27,405 | INFO     | [job] validate thread has finished
[2026-01-09 04:20:58] 2026-01-09 09:20:27,436 | INFO     | all data control threads have been joined
[2026-01-09 04:20:58] 2026-01-09 09:20:27,644 | INFO     | [payload] control thread has finished
[2026-01-09 04:20:58] 2026-01-09 09:20:28,090 | INFO     | [data] copytool_in thread has finished
[2026-01-09 04:20:58] 2026-01-09 09:20:28,093 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 04:20:58] 2026-01-09 09:20:28,095 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 04:20:58] 2026-01-09 09:20:28,129 | INFO     | [job] control thread has finished
[2026-01-09 04:20:58] 2026-01-09 09:20:28,344 | INFO     | [data] copytool_out thread has finished
[2026-01-09 04:20:58] 2026-01-09 09:20:28,428 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 04:20:58] 2026-01-09 09:20:28,442 | INFO     | [data] control thread has finished
[2026-01-09 04:20:58] 2026-01-09 09:20:28,607 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 04:20:58] 2026-01-09 09:20:28,770 | INFO     | [payload] failed_post thread has finished
[2026-01-09 04:20:58] 2026-01-09 09:20:28,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 04:20:58] 2026-01-09 09:20:29,252 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 04:20:58] 2026-01-09 09:20:30,257 | INFO     | [job] queue monitor thread has finished
[2026-01-09 04:20:58] 2026-01-09 09:20:32,915 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 04:20:58] 2026-01-09 09:20:53,022 | INFO     | [monitor] cgroup control has ended
[2026-01-09 04:20:58] 2026-01-09 09:20:53,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140403581077312)>', '<ExcThread(monitor, started 140402984204032)>']
[2026-01-09 04:20:58] 2026-01-09 09:20:57,025 | INFO     | PID=9076 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 04:20:58] 2026-01-09 09:20:57,026 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 04:20:58] 2026-01-09 09:20:57,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 04:20:58] 2026-01-09 09:20:57,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 04:20:58] 2026-01-09 09:20:57,027 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 04:20:58] 2026-01-09 09:20:57,027 | INFO     | [monitor] control thread has ended
[2026-01-09 04:20:58] 2026-01-09 09:20:58,278 | INFO     | all workflow threads have been joined
[2026-01-09 04:20:58] 2026-01-09 09:20:58,278 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 04:20:58] 2026-01-09 09:20:58,284 | INFO     | traces error code: 0
[2026-01-09 04:20:58] 2026-01-09 09:20:58,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 04:20:58] 2026-01-09 09:20:58,392 [wrapper] ==== pilot stdout END ====
[2026-01-09 04:20:58] 2026-01-09 09:20:58,397 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 04:20:58] 2026-01-09 09:20:58,401 [wrapper] pilotpid: 9076
[2026-01-09 04:20:58] 2026-01-09 09:20:58,406 [wrapper] Pilot exit status: 0
[2026-01-09 04:20:58] 2026-01-09 09:20:58,424 [wrapper] pandaids: 6963152171 6963152171
[2026-01-09 04:20:58] 2026-01-09 09:20:58,471 [wrapper] cleanup supervisor_pilot 26518 9077
[2026-01-09 04:20:58] 2026-01-09 09:20:58,476 [wrapper] Test setup, not cleaning
[2026-01-09 04:20:58] 2026-01-09 09:20:58,481 [wrapper] apfmon messages muted
[2026-01-09 04:20:58] 2026-01-09 09:20:58,486 [wrapper] ==== wrapper stdout END ====
[2026-01-09 04:20:58] 2026-01-09 09:20:58,491 [wrapper] ==== wrapper stderr END ====
[2026-01-09 04:20:58]  *** Error codes and diagnostics ***
[2026-01-09 04:20:58]     "exeErrorCode": 0,
[2026-01-09 04:20:58]     "exeErrorDiag": "",
[2026-01-09 04:20:58]     "pilotErrorCode": 0,
[2026-01-09 04:20:58]     "pilotErrorDiag": "",
[2026-01-09 04:20:58]  *** Listing of results directory ***
[2026-01-09 04:20:58] total 660676
[2026-01-09 04:20:58] drwx------ 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-09 04:20:58] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 04:20:58] -rwx------ 1 boincer umatlas     36322 Jan  8 11:05 runpilot2-wrapper.sh
[2026-01-09 04:20:58] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 04:20:58] -rw-r--r-- 1 boincer umatlas       100 Jan  9 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 04:20:58] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 00:07 run_atlas
[2026-01-09 04:20:58] -rw-r--r-- 1 boincer umatlas       105 Jan  9 00:07 job.xml
[2026-01-09 04:20:58] -rw-r--r-- 3 boincer umatlas 223216225 Jan  9 00:07 EVNT.47898824._001134.pool.root.1
[2026-01-09 04:20:58] -rw-r--r-- 3 boincer umatlas 223216225 Jan  9 00:07 ATLAS.root_0
[2026-01-09 04:20:58] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 00:07 start_atlas.sh
[2026-01-09 04:20:58] drwxrwx--x 2 boincer umatlas      4096 Jan  9 00:07 shared
[2026-01-09 04:20:58] -rw-r--r-- 2 boincer umatlas    592398 Jan  9 00:07 input.tar.gz
[2026-01-09 04:20:58] -rw-r--r-- 1 boincer umatlas         0 Jan  9 00:07 boinc_lockfile
[2026-01-09 04:20:58] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 01:13 pandaJob.out
[2026-01-09 04:20:58] -rw------- 1 boincer umatlas        57 Jan  9 01:13 setup.sh.local
[2026-01-09 04:20:58] -rw------- 1 boincer umatlas    989771 Jan  9 01:13 agis_schedconf.cvmfs.json
[2026-01-09 04:20:58] -rw-r--r-- 1 boincer umatlas      5910 Jan  9 04:11 init_data.xml
[2026-01-09 04:20:58] -rw------- 1 boincer umatlas 222207199 Jan  9 04:19 HITS.47898826._028972.pool.root.1
[2026-01-09 04:20:58] -rw-r--r-- 1 boincer umatlas       531 Jan  9 04:20 boinc_task_state.xml
[2026-01-09 04:20:58] -rw------- 1 boincer umatlas      1051 Jan  9 04:20 memory_monitor_summary.json
[2026-01-09 04:20:58] -rw------- 1 boincer umatlas   1516240 Jan  9 04:20 agis_ddmendpoints.agis.ALL.json
[2026-01-09 04:20:58] -rw------- 1 boincer umatlas    436006 Jan  9 04:20 log.47898826._028972.job.log.tgz.1
[2026-01-09 04:20:58] -rw------- 1 boincer umatlas      7852 Jan  9 04:20 heartbeat.json
[2026-01-09 04:20:58] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 04:20 boinc_mmap_file
[2026-01-09 04:20:58] -rw-r--r-- 1 boincer umatlas        29 Jan  9 04:20 wrapper_checkpoint.txt
[2026-01-09 04:20:58] -rw------- 1 boincer umatlas        96 Jan  9 04:20 pilot_heartbeat.json
[2026-01-09 04:20:58] -rw------- 1 boincer umatlas      4745 Jan  9 04:20 pilotlog.txt
[2026-01-09 04:20:58] -rw------- 1 boincer umatlas   1549022 Jan  9 04:20 log.47898826._028972.job.log.1
[2026-01-09 04:20:58] -rw------- 1 boincer umatlas       357 Jan  9 04:20 output.list
[2026-01-09 04:20:58] -rw-r--r-- 1 boincer umatlas       620 Jan  9 04:20 runtime_log
[2026-01-09 04:20:58] -rw------- 1 boincer umatlas   2007040 Jan  9 04:20 result.tar.gz
[2026-01-09 04:20:58] -rw------- 1 boincer umatlas       788 Jan  9 04:20 WKDLDmQh7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmK3kKDmAKhlOn.diag
[2026-01-09 04:20:58] -rw-r--r-- 1 boincer umatlas      9428 Jan  9 04:20 runtime_log.err
[2026-01-09 04:20:58] -rw-r--r-- 1 boincer umatlas     23311 Jan  9 04:20 stderr.txt
[2026-01-09 04:20:58] HITS file was successfully produced:
[2026-01-09 04:20:58] -rw------- 1 boincer umatlas 222207199 Jan  9 04:19 shared/HITS.pool.root.1
[2026-01-09 04:20:58]  *** Contents of shared directory: ***
[2026-01-09 04:20:58] total 437548
[2026-01-09 04:20:58] -rw-r--r-- 3 boincer umatlas 223216225 Jan  9 00:07 ATLAS.root_0
[2026-01-09 04:20:58] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 00:07 start_atlas.sh
[2026-01-09 04:20:58] -rw-r--r-- 2 boincer umatlas    592398 Jan  9 00:07 input.tar.gz
[2026-01-09 04:20:58] -rw------- 1 boincer umatlas 222207199 Jan  9 04:19 HITS.pool.root.1
[2026-01-09 04:20:58] -rw------- 1 boincer umatlas   2007040 Jan  9 04:20 result.tar.gz
04:20:59 (4941): run_atlas exited; CPU time 79622.857273
04:20:59 (4941): called boinc_finish(0)

</stderr_txt>
]]>

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