Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:00 (1636262): wrapper (7.7.26015): starting
00:03:00 (1636262): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:03:00] Arguments: --nthreads 12
[2026-01-09 00:03:00] Threads: 12
[2026-01-09 00:03:00] Checking for CVMFS
[2026-01-09 00:03:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:03:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:03:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:03:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:03:01] 2.13.3.0 6634 21842 189428 154931 3 66 37876941 40960000 15608 16776704 0 23378728 99.712 18571847 47087 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:03:01] CVMFS is ok
[2026-01-09 00:03:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:03:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:03:01] Further information can be found at the LHC@home message board.
[2026-01-09 00:03:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:03:01] Checking for apptainer binary...
[2026-01-09 00:03:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:03:01] Running /usr/bin/apptainer --version
[2026-01-09 00:03:02] apptainer version 1.4.5-2.el9
[2026-01-09 00:03:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:03:02] c-206-37.aglt2.org
[2026-01-09 00:03:02] apptainer works
[2026-01-09 00:03:02] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:03:02] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:03:03] Starting ATLAS job with PandaID=6963079250
[2026-01-09 00:03:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:38:32]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:38:32] 2026-01-09 08:45:40,790 | INFO     | sum of square deviations: 3168448195.2811227
[2026-01-09 05:38:32] 2026-01-09 08:45:40,820 | INFO     | sum of deviations: 112617033034.99994
[2026-01-09 05:38:32] 2026-01-09 08:45:40,820 | INFO     | mean x: 1767941692.8525345
[2026-01-09 05:38:32] 2026-01-09 08:45:40,820 | INFO     | mean y: 2497715.0
[2026-01-09 05:38:32] 2026-01-09 08:45:40,820 | INFO     | intersect: -62835944246.732086
[2026-01-09 05:38:32] 2026-01-09 08:45:40,820 | INFO     | chi2: 10.461712056727489
[2026-01-09 05:38:32] 2026-01-09 08:45:40,821 | INFO     | sum of square deviations: 2954689784.320742
[2026-01-09 05:38:32] 2026-01-09 08:45:40,822 | INFO     | sum of deviations: 182607184651.15094
[2026-01-09 05:38:32] 2026-01-09 08:45:40,822 | INFO     | mean x: 1767941540.4433963
[2026-01-09 05:38:32] 2026-01-09 08:45:40,822 | INFO     | mean y: 2547644.179245283
[2026-01-09 05:38:32] 2026-01-09 08:45:40,822 | INFO     | intersect: -109260641013.1726
[2026-01-09 05:38:32] 2026-01-09 08:45:40,837 | INFO     | chi2: 6.6702750194678
[2026-01-09 05:38:32] 2026-01-09 08:45:40,838 | INFO     | current chi2=6.6702750194678 (change=36.24107619002546 %)
[2026-01-09 05:38:32] 2026-01-09 08:45:40,838 | INFO     | sum of square deviations: 2750587801.6908274
[2026-01-09 05:38:32] 2026-01-09 08:45:40,839 | INFO     | sum of deviations: 177682050979.38644
[2026-01-09 05:38:32] 2026-01-09 08:45:40,839 | INFO     | mean x: 1767941387.9613526
[2026-01-09 05:38:32] 2026-01-09 08:45:40,839 | INFO     | mean y: 2543964.0483091786
[2026-01-09 05:38:32] 2026-01-09 08:45:40,839 | INFO     | intersect: -114202663966.85829
[2026-01-09 05:38:32] 2026-01-09 08:45:40,840 | INFO     | chi2: 6.658484154519193
[2026-01-09 05:38:32] 2026-01-09 08:45:40,840 | INFO     | current chi2=6.658484154519193 (change=0.17676729841265415 %)
[2026-01-09 05:38:32] 2026-01-09 08:45:40,840 | INFO     | right removable region: 206
[2026-01-09 05:38:32] 2026-01-09 08:45:40,840 | INFO     | sum of square deviations: 2954193068.202847
[2026-01-09 05:38:32] 2026-01-09 08:45:40,841 | INFO     | sum of deviations: 47545039421.41029
[2026-01-09 05:38:32] 2026-01-09 08:45:40,841 | INFO     | mean x: 1767941845.4386792
[2026-01-09 05:38:32] 2026-01-09 08:45:40,871 | INFO     | mean y: 2543985.6084905663
[2026-01-09 05:38:32] 2026-01-09 08:45:40,871 | INFO     | intersect: -28450865387.28602
[2026-01-09 05:38:32] 2026-01-09 08:45:40,871 | INFO     | chi2: 7.110239244800517
[2026-01-09 05:38:32] 2026-01-09 08:45:40,871 | INFO     | current chi2=7.110239244800517 (change=32.03560558495567 %)
[2026-01-09 05:38:32] 2026-01-09 08:45:40,871 | INFO     | sum of square deviations: 2749785648.7632713
[2026-01-09 05:38:32] 2026-01-09 08:45:40,872 | INFO     | sum of deviations: -5090296552.927547
[2026-01-09 05:38:32] 2026-01-09 08:45:40,873 | INFO     | mean x: 1767941998.0338163
[2026-01-09 05:38:32] 2026-01-09 08:45:40,873 | INFO     | mean y: 2583252.275362319
[2026-01-09 05:38:32] 2026-01-09 08:45:40,873 | INFO     | intersect: 3275328916.074602
[2026-01-09 05:38:32] 2026-01-09 08:45:40,873 | INFO     | chi2: 5.058541588899582
[2026-01-09 05:38:32] 2026-01-09 08:45:40,873 | INFO     | current chi2=5.058541588899582 (change=28.855536153741568 %)
[2026-01-09 05:38:32] 2026-01-09 08:45:40,873 | INFO     | sum of square deviations: 2555018947.1534624
[2026-01-09 05:38:32] 2026-01-09 08:45:40,875 | INFO     | sum of deviations: -34341644048.153465
[2026-01-09 05:38:32] 2026-01-09 08:45:40,875 | INFO     | mean x: 1767942150.628713
[2026-01-09 05:38:32] 2026-01-09 08:45:40,875 | INFO     | mean y: 2606147.371287129
[2026-01-09 05:38:32] 2026-01-09 08:45:40,875 | INFO     | intersect: 23765263603.301105
[2026-01-09 05:38:32] 2026-01-09 08:45:40,875 | INFO     | chi2: 4.421425084018253
[2026-01-09 05:38:32] 2026-01-09 08:45:40,875 | INFO     | current chi2=4.421425084018253 (change=12.594865410999331 %)
[2026-01-09 05:38:32] 2026-01-09 08:45:40,875 | INFO     | left removable region: 30
[2026-01-09 05:38:32] 2026-01-09 08:45:40,876 | INFO     | sum of square deviations: 1689322608.8863637
[2026-01-09 05:38:32] 2026-01-09 08:45:40,876 | INFO     | sum of deviations: 761638857.284091
[2026-01-09 05:38:32] 2026-01-09 08:45:40,877 | INFO     | mean x: 1767942273.0795455
[2026-01-09 05:38:32] 2026-01-09 08:45:40,877 | INFO     | mean y: 2691453.5511363638
[2026-01-09 05:38:32] 2026-01-09 08:45:40,877 | INFO     | intersect: -794393440.434984
[2026-01-09 05:38:32] 2026-01-09 08:45:40,877 | INFO     | chi2: 0.0030343762547122228
[2026-01-09 05:38:32] 2026-01-09 08:45:40,877 | INFO     | current memory leak: 0.45 B/s (using 176 data points, chi2=0.00)
[2026-01-09 05:38:32] 2026-01-09 08:45:40,878 | INFO     | could have reported an average CPU frequency of 3291 MHz (11 samples)
[2026-01-09 05:38:32] 2026-01-09 08:45:40,878 | INFO     | ..............................
[2026-01-09 05:38:32] 2026-01-09 08:45:40,878 | INFO     | . Timing measurements:
[2026-01-09 05:38:32] 2026-01-09 08:45:40,878 | INFO     | . get job = 0 s
[2026-01-09 05:38:32] 2026-01-09 08:45:40,878 | INFO     | . initial setup = 3 s
[2026-01-09 05:38:32] 2026-01-09 08:45:40,878 | INFO     | . payload setup = 25 s
[2026-01-09 05:38:32] 2026-01-09 08:45:40,878 | INFO     | . stage-in = 0 s
[2026-01-09 05:38:32] 2026-01-09 08:45:40,878 | INFO     | . payload execution = 13202 s
[2026-01-09 05:38:32] 2026-01-09 08:45:40,878 | INFO     | . stage-out = 8 s
[2026-01-09 05:38:32] 2026-01-09 08:45:40,878 | INFO     | . log creation = 2 s
[2026-01-09 05:38:32] 2026-01-09 08:45:40,878 | INFO     | ..............................
[2026-01-09 05:38:32] 2026-01-09 08:45:41,584 | INFO     | 
[2026-01-09 05:38:32] 2026-01-09 08:45:41,584 | INFO     | job summary report
[2026-01-09 05:38:32] 2026-01-09 08:45:41,584 | INFO     | --------------------------------------------------
[2026-01-09 05:38:32] 2026-01-09 08:45:41,584 | INFO     | PanDA job id: 6963079250
[2026-01-09 05:38:32] 2026-01-09 08:45:41,584 | INFO     | task id: 47898826
[2026-01-09 05:38:32] 2026-01-09 08:45:41,584 | INFO     | errors: (none)
[2026-01-09 05:38:32] 2026-01-09 08:45:41,584 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:38:32] 2026-01-09 08:45:41,584 | INFO     | pilot state: finished 
[2026-01-09 05:38:32] 2026-01-09 08:45:41,584 | INFO     | transexitcode: 0
[2026-01-09 05:38:32] 2026-01-09 08:45:41,584 | INFO     | exeerrorcode: 0
[2026-01-09 05:38:32] 2026-01-09 08:45:41,584 | INFO     | exeerrordiag: 
[2026-01-09 05:38:32] 2026-01-09 08:45:41,584 | INFO     | exitcode: 0
[2026-01-09 05:38:32] 2026-01-09 08:45:41,585 | INFO     | exitmsg: OK
[2026-01-09 05:38:32] 2026-01-09 08:45:41,585 | INFO     | cpuconsumptiontime: 46601 s
[2026-01-09 05:38:32] 2026-01-09 08:45:41,585 | INFO     | nevents: 400
[2026-01-09 05:38:32] 2026-01-09 08:45:41,585 | INFO     | neventsw: 0
[2026-01-09 05:38:32] 2026-01-09 08:45:41,585 | INFO     | pid: 1666272
[2026-01-09 05:38:32] 2026-01-09 08:45:41,585 | INFO     | pgrp: 1666272
[2026-01-09 05:38:32] 2026-01-09 08:45:41,585 | INFO     | corecount: 12
[2026-01-09 05:38:32] 2026-01-09 08:45:41,585 | INFO     | event service: False
[2026-01-09 05:38:32] 2026-01-09 08:45:41,585 | INFO     | sizes: {0: 2283969, 1: 2283997, 11: 2283997, 20: 2284287, 22: 2284315, 13233: 2314782, 13242: 2323808, 13243: 2323864, 13286: 2324058}
[2026-01-09 05:38:32] 2026-01-09 08:45:41,585 | INFO     | --------------------------------------------------
[2026-01-09 05:38:32] 2026-01-09 08:45:41,585 | INFO     | 
[2026-01-09 05:38:32] 2026-01-09 08:45:41,586 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 05:38:32] 2026-01-09 08:45:41,882 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,882 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,882 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,882 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,882 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,882 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,883 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,883 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,883 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,883 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,883 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,883 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,883 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,883 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,883 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,883 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,883 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,883 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:38:32] 2026-01-09 08:45:41,883 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,883 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:38:32] 2026-01-09 08:45:41,883 | INFO     | job 6963079250 has completed (purged errors)
[2026-01-09 05:38:32] 2026-01-09 08:45:41,884 | INFO     | overall cleanup function is called
[2026-01-09 05:38:32] 2026-01-09 08:45:43,011 | INFO     | --- collectZombieJob: --- 10, [1666272]
[2026-01-09 05:38:32] 2026-01-09 08:45:43,011 | INFO     | zombie collector waiting for pid 1666272
[2026-01-09 05:38:32] 2026-01-09 08:45:43,011 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:38:32] 2026-01-09 08:45:43,011 | INFO     | collected zombie processes
[2026-01-09 05:38:32] 2026-01-09 08:45:43,011 | INFO     | will attempt to kill all subprocesses of pid=1666272
[2026-01-09 05:38:32] 2026-01-09 08:45:45,082 | INFO     | PID=1643781 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 05:38:32] 2026-01-09 08:45:45,082 | INFO     | .. there are 12 such processes running
[2026-01-09 05:38:32] 2026-01-09 08:45:45,565 | INFO     | process IDs to be killed: [1666272] (in reverse order)
[2026-01-09 05:38:32] 2026-01-09 08:45:46,506 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:38:32] 2026-01-09 08:45:46,506 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:38:32] 2026-01-09 08:45:46,571 | INFO     | did not find any defunct processes belonging to 1666272
[2026-01-09 05:38:32] 2026-01-09 08:45:46,582 | INFO     | did not find any defunct processes belonging to 1666272
[2026-01-09 05:38:32] 2026-01-09 08:45:46,583 | INFO     | ready for new job
[2026-01-09 05:38:32] 2026-01-09 08:45:46,583 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:38:32] 2026-01-09 08:45:46,585 | INFO     | ***************************************
[2026-01-09 05:38:32] 2026-01-09 08:45:46,585 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:38:32] 2026-01-09 08:45:46,585 | INFO     | ***************************************
[2026-01-09 05:38:32] 2026-01-09 08:45:46,585 | INFO     | 
[2026-01-09 05:38:32] 2026-01-09 08:45:46,588 | INFO     | architecture information:
[2026-01-09 05:38:32] 2026-01-09 08:45:46,599 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:38:32] 2026-01-09 08:45:46,837 | INFO     | cat /etc/os-release:
[2026-01-09 05:38:32] NAME="CentOS Linux"
[2026-01-09 05:38:32] VERSION="7 (Core)"
[2026-01-09 05:38:32] ID="centos"
[2026-01-09 05:38:32] ID_LIKE="rhel fedora"
[2026-01-09 05:38:32] VERSION_ID="7"
[2026-01-09 05:38:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:38:32] ANSI_COLOR="0;31"
[2026-01-09 05:38:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:38:32] HOME_URL="https://www.centos.org/"
[2026-01-09 05:38:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:38:32] 
[2026-01-09 05:38:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:38:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:38:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:38:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:38:32] 
[2026-01-09 05:38:32] 2026-01-09 08:45:46,838 | INFO     | ***************************************
[2026-01-09 05:38:32] 2026-01-09 08:45:47,341 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 05:38:32] 2026-01-09 08:45:47,509 | INFO     | sufficient remaining disk space (82694897664 B)
[2026-01-09 05:38:32] 2026-01-09 08:45:47,510 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:38:32] 2026-01-09 08:45:47,511 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:38:32] 2026-01-09 08:45:47,511 | INFO     | update_server=False
[2026-01-09 05:38:32] 2026-01-09 08:45:47,511 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:38:32] 2026-01-09 08:45:47,512 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:38:32] 2026-01-09 08:45:47,596 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 05:38:32] 2026-01-09 08:45:47,597 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 05:38:32] 2026-01-09 08:45:47,597 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:38:32] 2026-01-09 08:45:47,597 | INFO     | will abort loop
[2026-01-09 05:38:32] 2026-01-09 08:45:47,782 | INFO     | all payload control threads have been joined
[2026-01-09 05:38:32] 2026-01-09 08:45:47,841 | INFO     | all job control threads have been joined
[2026-01-09 05:38:32] 2026-01-09 08:45:47,877 | INFO     | all data control threads have been joined
[2026-01-09 05:38:32] 2026-01-09 08:45:48,517 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:38:32] 2026-01-09 08:45:48,522 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:38:32] 2026-01-09 08:45:48,534 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:38:32] 2026-01-09 08:45:48,571 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:38:32] 2026-01-09 08:45:48,575 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:38:32] 2026-01-09 08:45:48,579 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:38:32] 2026-01-09 08:45:48,582 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:38:32] 2026-01-09 08:45:48,583 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:38:32] 2026-01-09 08:45:48,603 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:38:32] 2026-01-09 08:45:48,788 | INFO     | [payload] control thread has finished
[2026-01-09 05:38:32] 2026-01-09 08:45:48,847 | INFO     | [job] control thread has finished
[2026-01-09 05:38:32] 2026-01-09 08:45:48,883 | INFO     | [data] control thread has finished
[2026-01-09 05:38:32] 2026-01-09 08:45:49,178 | INFO     | [job] validate thread has finished
[2026-01-09 05:38:32] 2026-01-09 08:45:49,593 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:38:32] 2026-01-09 08:45:49,718 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:38:32] 2026-01-09 08:45:50,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:38:32] 2026-01-09 08:45:50,542 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:38:32] 2026-01-09 08:45:54,161 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:38:32] 2026-01-09 08:46:03,229 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:38:32] 2026-01-09 08:46:03,653 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139822662063936)>', '<ExcThread(monitor, started 139822089877248)>']
[2026-01-09 05:38:32] 2026-01-09 08:46:08,679 | INFO     | all workflow threads have been joined
[2026-01-09 05:38:32] 2026-01-09 08:46:08,679 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:38:32] 2026-01-09 08:46:08,679 | INFO     | traces error code: 0
[2026-01-09 05:38:32] 2026-01-09 08:46:08,679 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:38:32] 2026-01-09 08:46:18,567 | INFO     | PID=1643781 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 05:38:32] 2026-01-09 08:46:18,568 | INFO     | .. there are 12 such processes running
[2026-01-09 05:38:32] 2026-01-09 08:46:18,568 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:38:32] 2026-01-09 08:46:18,568 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:38:32] 2026-01-09 08:46:18,568 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:38:32] 2026-01-09 08:46:18,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:38:32] 2026-01-09 08:46:18,568 | INFO     | [monitor] control thread has ended
[2026-01-09 05:38:32] 2026-01-09 08:46:18,756 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:38:32] 2026-01-09 08:46:18,801 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:38:32] 2026-01-09 08:46:18,865 [wrapper] pilotpid: 1643781
[2026-01-09 05:38:32] 2026-01-09 08:46:18,896 [wrapper] Pilot exit status: 0
[2026-01-09 05:38:32] 2026-01-09 08:46:19,146 [wrapper] pandaids: 6963079250
[2026-01-09 05:38:32] 2026-01-09 08:46:19,491 [wrapper] cleanup supervisor_pilot 2051609 1643782
[2026-01-09 05:38:32] 2026-01-09 08:46:19,529 [wrapper] Test setup, not cleaning
[2026-01-09 05:38:32] 2026-01-09 08:46:19,570 [wrapper] apfmon messages muted
[2026-01-09 05:38:32] 2026-01-09 08:46:19,646 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:38:32] 2026-01-09 08:46:19,685 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:38:32]  *** Error codes and diagnostics ***
[2026-01-09 05:38:32]     "exeErrorCode": 0,
[2026-01-09 05:38:32]     "exeErrorDiag": "",
[2026-01-09 05:38:32]     "pilotErrorCode": 0,
[2026-01-09 05:38:32]     "pilotErrorDiag": "",
[2026-01-09 05:38:32]  *** Listing of results directory ***
[2026-01-09 05:38:32] total 448928
[2026-01-09 05:38:32] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-09 05:38:32] -rwx------. 1 boincer umatlas     36322 Jan  8 06:10 runpilot2-wrapper.sh
[2026-01-09 05:38:32] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:14 queuedata.json
[2026-01-09 05:38:32] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:38:32] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:03 run_atlas
[2026-01-09 05:38:32] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:03 job.xml
[2026-01-09 05:38:32] -rw-r--r--. 2 boincer umatlas 226579745 Jan  9 00:03 EVNT.47898824._000984.pool.root.1
[2026-01-09 05:38:32] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:03 start_atlas.sh
[2026-01-09 05:38:32] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:03 shared
[2026-01-09 05:38:32] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 00:03 input.tar.gz
[2026-01-09 05:38:32] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:03 boinc_lockfile
[2026-01-09 05:38:32] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 00:03 pandaJob.out
[2026-01-09 05:38:32] -rw-------. 1 boincer umatlas        57 Jan  9 00:03 setup.sh.local
[2026-01-09 05:38:32] -rw-------. 1 boincer umatlas    989771 Jan  9 00:03 agis_schedconf.cvmfs.json
[2026-01-09 05:38:32] drwx------. 5 boincer umatlas      4096 Jan  9 00:03 pilot3
[2026-01-09 05:38:32] -rw-------. 1 boincer umatlas 224552520 Jan  9 03:40 HITS.47898826._025000.pool.root.1
[2026-01-09 05:38:32] -rw-r--r--. 1 boincer umatlas       530 Jan  9 03:40 boinc_task_state.xml
[2026-01-09 05:38:32] -rw-------. 1 boincer umatlas      1026 Jan  9 03:44 memory_monitor_summary.json
[2026-01-09 05:38:32] -rw-------. 1 boincer umatlas   1516240 Jan  9 03:44 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:38:32] -rw-------. 1 boincer umatlas    524578 Jan  9 03:44 log.47898826._025000.job.log.tgz.1
[2026-01-09 05:38:32] -rw-------. 1 boincer umatlas        95 Jan  9 03:45 pilot_heartbeat.json
[2026-01-09 05:38:32] -rw-------. 1 boincer umatlas      7773 Jan  9 03:45 heartbeat.json
[2026-01-09 05:38:32] -rw-------. 1 boincer umatlas       823 Jan  9 03:46 pilotlog.txt
[2026-01-09 05:38:32] -rw-------. 1 boincer umatlas   1799563 Jan  9 03:46 log.47898826._025000.job.log.1
[2026-01-09 05:38:32] -rw-------. 1 boincer umatlas       357 Jan  9 03:46 output.list
[2026-01-09 05:38:32] -rw-r--r--. 1 boincer umatlas       620 Jan  9 03:46 runtime_log
[2026-01-09 05:38:32] -rw-------. 1 boincer umatlas   2344960 Jan  9 03:46 result.tar.gz
[2026-01-09 05:38:32] -rw-------. 1 boincer umatlas       656 Jan  9 03:46 SunMDmv52x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSRkKDmW1HJNo.diag
[2026-01-09 05:38:32] -rw-r--r--. 1 boincer umatlas      9345 Jan  9 03:46 runtime_log.err
[2026-01-09 05:38:32] -rw-r--r--. 1 boincer umatlas      6905 Jan  9 05:28 init_data.xml
[2026-01-09 05:38:32] -rw-r--r--. 1 boincer umatlas        28 Jan  9 05:38 wrapper_checkpoint.txt
[2026-01-09 05:38:32] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 05:38 boinc_mmap_file
[2026-01-09 05:38:32] -rw-r--r--. 1 boincer umatlas     21175 Jan  9 05:38 stderr.txt
[2026-01-09 05:38:32] HITS file was successfully produced:
[2026-01-09 05:38:32] -rw-------. 1 boincer umatlas 224552520 Jan  9 03:40 shared/HITS.pool.root.1
[2026-01-09 05:38:32]  *** Contents of shared directory: ***
[2026-01-09 05:38:32] total 443460
[2026-01-09 05:38:32] -rw-r--r--. 2 boincer umatlas 226579745 Jan  9 00:03 ATLAS.root_0
[2026-01-09 05:38:32] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:03 start_atlas.sh
[2026-01-09 05:38:32] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 00:03 input.tar.gz
[2026-01-09 05:38:32] -rw-------. 1 boincer umatlas 224552520 Jan  9 03:40 HITS.pool.root.1
[2026-01-09 05:38:32] -rw-------. 1 boincer umatlas   2344960 Jan  9 03:46 result.tar.gz
05:38:34 (1636262): run_atlas exited; CPU time 46795.610716
05:38:34 (1636262): called boinc_finish(0)

</stderr_txt>
]]>

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